Citrus Sinensis ID: 037042
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1002 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGP4 | 1010 | Probable LRR receptor-lik | yes | no | 0.950 | 0.942 | 0.391 | 1e-179 | |
| C0LGT6 | 1031 | LRR receptor-like serine/ | no | no | 0.938 | 0.911 | 0.366 | 1e-162 | |
| Q9SD62 | 1025 | Putative receptor-like pr | no | no | 0.948 | 0.926 | 0.370 | 1e-151 | |
| Q9FL28 | 1173 | LRR receptor-like serine/ | no | no | 0.966 | 0.825 | 0.327 | 1e-136 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.913 | 0.732 | 0.345 | 1e-132 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.911 | 0.729 | 0.335 | 1e-128 | |
| Q9ZUI0 | 980 | Putative leucine-rich rep | no | no | 0.816 | 0.834 | 0.349 | 1e-126 | |
| Q9M2Z1 | 1002 | Leucine-rich repeat recep | no | no | 0.917 | 0.917 | 0.336 | 1e-125 | |
| Q9LHP4 | 1141 | Receptor-like protein kin | no | no | 0.926 | 0.813 | 0.319 | 1e-120 | |
| O49545 | 1003 | Leucine-rich repeat recep | no | no | 0.927 | 0.926 | 0.332 | 1e-119 |
| >sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust.
Identities = 396/1011 (39%), Positives = 559/1011 (55%), Gaps = 59/1011 (5%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTI 69
TD AL K+ ++ D +WN S CNW GVTC + RVT L + L L G I
Sbjct: 24 TDRQALLQFKSQVSED-KRVVLSSWNHSFPLCNWKGVTCGRKNKRVTHLELGRLQLGGVI 82
Query: 70 PSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNI--CSNLPF 127
+GNLS L SL L+ N F G+IP + + L+ L G N L G IP + CS L
Sbjct: 83 SPSIGNLSFLVSLDLYENFFGGTIPQEVGQLSRLEYLDMGINYLRGPIPLGLYNCSRL-- 140
Query: 128 FESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187
+L L N G +PS L + T L L L N+ G +P +GNLT LE+L LS N L+
Sbjct: 141 -LNLRLDSNRLGGSVPSELGSLTNLVQLNLYGNNMRGKLPTSLGNLTLLEQLALSHNNLE 199
Query: 188 GAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMS 247
G EIP+++ L + L L N GV P ++N+S
Sbjct: 200 G-------------------------EIPSDVAQLTQIWSLQLVANNFSGVFPPALYNLS 234
Query: 248 TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNS 307
+++ +G+ N SG L+ + LPNL + GN+F+GSIP + N S L RL + +N+
Sbjct: 235 SLKLLGIGYNHFSGRLRPDLGILLPNLLSFNMGGNYFTGSIPTTLSNISTLERLGMNENN 294
Query: 308 FSGFIPSTFGNLRNLKRLGLNNNHLTS-LTLELSFLSSLSNCKYLEFIDLSSNSIDGILS 366
+G IP TFGN+ NLK L L+ N L S + +L FL+SL+NC LE + + N + G L
Sbjct: 295 LTGSIP-TFGNVPNLKLLFLHTNSLGSDSSRDLEFLTSLTNCTQLETLGIGRNRLGGDLP 353
Query: 367 RKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQ 426
S+ NLS L D+ +SGSIP +IGNL NL L N L+G +P +LGKL L+
Sbjct: 354 -ISIANLSAKLVTLDLGGTLISGSIPYDIGNLINLQKLILDQNMLSGPLPTSLGKLLNLR 412
Query: 427 VLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISV 486
L N+L G IP + + + LDLSNN G +P G+ + L L + N+L
Sbjct: 413 YLSLFSNRLSGGIPAFIGNMTMLETLDLSNNGFEGIVPTSLGNCSHLLELWIGDNKLNGT 472
Query: 487 IPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQ 546
IP ++ +L L++S NSL G LP +IG L+ L + N SG +P +G ++
Sbjct: 473 IPLEIMKIQQLLRLDMSGNSLIGSLPQDIGALQNLGTLSLGDNKLSGKLPQTLGNCLTME 532
Query: 547 FLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606
LFLE N+ G IPD G L+ +K ++LSNN+LSGSIP S L+ LNLSFN LEG+
Sbjct: 533 SLFLEGNLFYGDIPDLKG-LVGVKEVDLSNNDLSGSIPEYFASFSKLEYLNLSFNNLEGK 591
Query: 607 IPKGGSFGNFSAESFEGNKLLCGS-PNLHVPPCKTSI-----QHTRRKNTILLGIFLPLS 660
+P G F N + S GN LCG + PC + +H+ R +++G+ + ++
Sbjct: 592 VPVKGIFENATTVSIVGNNDLCGGIMGFQLKPCLSQAPSVVKKHSSRLKKVVIGVSVGIT 651
Query: 661 ---TIFMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRG 717
+FM +V L+ R RK+ ++ N E + SY +L AT+GFS +N++G G
Sbjct: 652 LLLLLFMASVTLIWLRKRKKNKETNNPTPSTLEVLHEKISYGDLRNATNGFSSSNMVGSG 711
Query: 718 GFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776
FG+VYKA + + VAVKV N Q A KSF ECE +K IRHRN++K+++ CS DF
Sbjct: 712 SFGTVYKALLLTEKKVVAVKVLNMQRRGAMKSFMAECESLKDIRHRNLVKLLTACSSIDF 771
Query: 777 KA-LFKALALEYMPHGSLEKYLYSS--------NYILDIFQRLNIMIDVASALEYLYFGY 827
+ F+AL E+MP+GSL+ +L+ + L + +RLNI IDVAS L+YL+
Sbjct: 772 QGNEFRALIYEFMPNGSLDMWLHPEEVEEIHRPSRTLTLLERLNIAIDVASVLDYLHVHC 831
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR--EDQFVTQTQTP---ATIGYMALE 882
P+ HCDLKPSNVLL D++ AH+SDFG+ +LL + E+ F Q + TIGY A E
Sbjct: 832 HEPIAHCDLKPSNVLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPE 891
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942
YG G+ S NGDVY+FG++L+E FTGK+PTNE+F TL + L I+ IVD S+
Sbjct: 892 YGVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESI 951
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993
L +C++ VF + + C ESP R+ +V L+ I + F
Sbjct: 952 LHIGLRVGFPVVECLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERFF 1002
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 571 bits (1472), Expect = e-162, Method: Compositional matrix adjust.
Identities = 369/1006 (36%), Positives = 545/1006 (54%), Gaps = 66/1006 (6%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTI 69
TD+ AL K+ ++ + +WN S FCNW GVTC RV +LN+ L+G I
Sbjct: 30 TDMQALLEFKSQVSENNKREVLASWNHSSPFCNWIGVTCGRRRERVISLNLGGFKLTGVI 89
Query: 70 PSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFE 129
+GNLS L+ L L N F +IP + + L+ L+ N L G IP+++ SN
Sbjct: 90 SPSIGNLSFLRLLNLADNSFGSTIPQKVGRLFRLQYLNMSYNLLEGRIPSSL-SNCSRLS 148
Query: 130 SLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA 189
+++LS N G+PS L + + L IL LS N+ G P +GNLT L++L ++N ++G
Sbjct: 149 TVDLSSNHLGHGVPSELGSLSKLAILDLSKNNLTGNFPASLGNLTSLQKLDFAYNQMRG- 207
Query: 190 YDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTI 249
EIP+E+ L + + LN G P ++N+S++
Sbjct: 208 ------------------------EIPDEVARLTQMVFFQIALNSFSGGFPPALYNISSL 243
Query: 250 QGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFS 309
+ + L +NS SG+L++ LPNL L L N F+G+IP + N S L R ++ N S
Sbjct: 244 ESLSLADNSFSGNLRADFGYLLPNLRRLLLGTNQFTGAIPKTLANISSLERFDISSNYLS 303
Query: 310 GFIPSTFGNLRNLKRLGLNNNHLTSLTLEL-SFLSSLSNCKYLEFIDLSSNSIDGILSRK 368
G IP +FG LRNL LG+ NN L + + F+ +++NC LE++D+ N + G L
Sbjct: 304 GSIPLSFGKLRNLWWLGIRNNSLGNNSSSGLEFIGAVANCTQLEYLDVGYNRLGGELP-A 362
Query: 369 SVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVL 428
S+ NLS +L + +SG+IP +IGNL +L L N L+G +P++ GKL LQV+
Sbjct: 363 SIANLSTTLTSLFLGQNLISGTIPHDIGNLVSLQELSLETNMLSGELPVSFGKLLNLQVV 422
Query: 429 YFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP 488
N + G IP + ++ +L L++N G IP G L +L + +N L IP
Sbjct: 423 DLYSNAISGEIPSYFGNMTRLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIP 482
Query: 489 STFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFL 548
+ + Y++LS+N LTG P E+G L++LV + S N SG +P AIGG ++FL
Sbjct: 483 QEILQIPSLAYIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFL 542
Query: 549 FLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608
F++ N G+IPD L+SLK+++ SNNNLSG IP L L L++LNLS NK EG +P
Sbjct: 543 FMQGNSFDGAIPD-ISRLVSLKNVDFSNNNLSGRIPRYLASLPSLRNLNLSMNKFEGRVP 601
Query: 609 KGGSFGNFSAESFEGNKLLCGS-PNLHVPPCKTSIQHTRRK-----NTILLGIFLPLSTI 662
G F N +A S GN +CG + + PC +RK ++ GI + ++++
Sbjct: 602 TTGVFRNATAVSVFGNTNICGGVREMQLKPCIVQASPRKRKPLSVRKKVVSGICIGIASL 661
Query: 663 FMIAVILLIARNRKRGRQQPNDADMPQEAT-----WRRFSYLELCQATDGFSENNLIGRG 717
+I ++ + KR ++ P ++T + SY EL AT FS NLIG G
Sbjct: 662 LLIIIVASLCWFMKRKKKNNASDGNPSDSTTLGMFHEKVSYEELHSATSRFSSTNLIGSG 721
Query: 718 GFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776
FG+V+K + + VAVKV N A KSF ECE K IRHRN++K+I+ CS D
Sbjct: 722 NFGNVFKGLLGPENKLVAVKVLNLLKHGATKSFMAECETFKGIRHRNLVKLITVCSSLDS 781
Query: 777 KA-LFKALALEYMPHGSLEKYLY--------SSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ F+AL E+MP GSL+ +L + L ++LNI IDVASALEYL+
Sbjct: 782 EGNDFRALVYEFMPKGSLDMWLQLEDLERVNDHSRSLTPAEKLNIAIDVASALEYLHVHC 841
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ--FVTQTQTP---ATIGYMALE 882
PV HCD+KPSN+LL D++ AH+SDFG+ +LL + D+ F+ Q + TIGY A E
Sbjct: 842 HDPVAHCDIKPSNILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPE 901
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942
YG G+ S GDVY+FG++L+E F+GKKPT+E F D+ L S K +
Sbjct: 902 YGMGGQPSIQGDVYSFGILLLEMFSGKKPTDESF---------AGDYNLHSYTKSILSGC 952
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
S A ++ + V + ++C+ E P R+ E V L+ I
Sbjct: 953 TSSGGSN--AIDEGLRLVLQVGIKCSEEYPRDRMRTDEAVRELISI 996
|
Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 535 bits (1378), Expect = e-151, Method: Compositional matrix adjust.
Identities = 374/1010 (37%), Positives = 557/1010 (55%), Gaps = 60/1010 (5%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTI 69
TD AL K+ ++ + + +WN S+ C+WTGV C + RVT +++ L L+G +
Sbjct: 39 TDKQALLEFKSQVS-ETSRVVLGSWNDSLPLCSWTGVKCGLKHRRVTGVDLGGLKLTGVV 97
Query: 70 PSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFE 129
+GNLS L+SL L N F G+IP + N+ L+ L+ +N G IP + SN
Sbjct: 98 SPFVGNLSFLRSLNLADNFFHGAIPSEVGNLFRLQYLNMSNNLFGGVIPV-VLSNCSSLS 156
Query: 130 SLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA 189
+L+LS N G+P + + L +L L N+ G P +GNLT L+ L +N ++G
Sbjct: 157 TLDLSSNHLEQGVPLEFGSLSKLVLLSLGRNNLTGKFPASLGNLTSLQMLDFIYNQIEG- 215
Query: 190 YDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTI 249
EIP +I L+ + + LNK GV P I+N+S++
Sbjct: 216 ------------------------EIPGDIARLKQMIFFRIALNKFNGVFPPPIYNLSSL 251
Query: 250 QGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFS 309
+ + NS SG+L+ LPNL+ LY+ N F+G+IP + N S L +L++ N +
Sbjct: 252 IFLSITGNSFSGTLRPDFGSLLPNLQILYMGINSFTGTIPETLSNISSLRQLDIPSNHLT 311
Query: 310 GFIPSTFGNLRNLKRLGLNNNHLTSLTL-ELSFLSSLSNCKYLEFIDLSSNSIDGILSRK 368
G IP +FG L+NL LGLNNN L + + +L FL +L+NC L+++++ N + G L
Sbjct: 312 GKIPLSFGRLQNLLLLGLNNNSLGNYSSGDLDFLGALTNCSQLQYLNVGFNKLGGQLP-V 370
Query: 369 SVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVL 428
+ NLS L + +SGSIP IGNL +L LG N L G +P +LG+L +L+ +
Sbjct: 371 FIANLSTQLTELSLGGNLISGSIPHGIGNLVSLQTLDLGENLLTGKLPPSLGELSELRKV 430
Query: 429 YFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP 488
N L G IP + ++ + L L NN GSIP+ G + L +L+L +N+L IP
Sbjct: 431 LLYSNGLSGEIPSSLGNISGLTYLYLLNNSFEGSIPSSLGSCSYLLDLNLGTNKLNGSIP 490
Query: 489 STFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFL 548
L ++ LN+S N L GPL +IG LK L+ +D S N SG IP + L+FL
Sbjct: 491 HELMELPSLVVLNVSFNLLVGPLRQDIGKLKFLLALDVSYNKLSGQIPQTLANCLSLEFL 550
Query: 549 FLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608
L+ N G IPD G L L+ L+LS NNLSG+IP + S L++LNLS N +G +P
Sbjct: 551 LLQGNSFVGPIPDIRG-LTGLRFLDLSKNNLSGTIPEYMANFSKLQNLNLSLNNFDGAVP 609
Query: 609 KGGSFGNFSAESFEGNKLLCGS-PNLHVPPCKTSIQHTRRKNTILLGIFLPLSTIFMIAV 667
G F N SA S GN LCG P+L + PC S++ RR +++ I + +S + +
Sbjct: 610 TEGVFRNTSAMSVFGNINLCGGIPSLQLQPC--SVELPRRHSSVRKIITICVSAVMAALL 667
Query: 668 ILLIARNR--------KRGRQQPNDADM---PQEATWRRFSYLELCQATDGFSENNLIGR 716
+L + K R N+ D P ++ + + SY EL + T GFS +NLIG
Sbjct: 668 LLCLCVVYLCWYKLRVKSVRANNNENDRSFSPVKSFYEKISYDELYKTTGGFSSSNLIGS 727
Query: 717 GGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGD 775
G FG+V+K + VA+KV N A KSF ECE + IRHRN++K+++ CS D
Sbjct: 728 GNFGAVFKGFLGSKNKAVAIKVLNLCKRGAAKSFIAECEALGGIRHRNLVKLVTICSSSD 787
Query: 776 FKA-LFKALALEYMPHGSLEKYLY--------SSNYILDIFQRLNIMIDVASALEYLYFG 826
F+ F+AL E+MP+G+L+ +L+ + + L +F RLNI IDVASAL YL+
Sbjct: 788 FEGNDFRALVYEFMPNGNLDMWLHPDEIEETGNPSRTLGLFARLNIAIDVASALVYLHTY 847
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ-----TPATIGYMAL 881
P+ HCD+KPSN+LL ++ AH+SDFG+ +LL + D+ Q TIGY A
Sbjct: 848 CHNPIAHCDIKPSNILLDKDLTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAP 907
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI-SIMKIVDG 940
EYG G S GDVY+FG++L+E FTGK+PTN++F +G+TL + L + I D
Sbjct: 908 EYGMGGHPSIMGDVYSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDE 967
Query: 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990
++L Q +C++ VF + + C+ ESP RI+ E +++L+ I +
Sbjct: 968 TILRGAYAQHFNMVECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRE 1017
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 372/1137 (32%), Positives = 559/1137 (49%), Gaps = 169/1137 (14%)
Query: 11 DLDALHALKTHITNDPTNFFAKNWN--SSISFCNWTGVTCDVHSHRVTA----------- 57
+++AL + K I+NDP + +W S+ CNWTG+TCD H V+
Sbjct: 30 EIEALKSFKNGISNDPLGVLS-DWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVL 88
Query: 58 ------------LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKL 105
L+++ S +G IP+ +G L+ L L L+ N FSGSIP I+ + +
Sbjct: 89 SPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFY 148
Query: 106 LSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGG 165
L +N LSG++P IC + N G IP L + +L++ + N G
Sbjct: 149 LDLRNNLLSGDVPEEICKTSSLV-LIGFDYNNLTGKIPECLGDLVHLQMFVAAGNHLTGS 207
Query: 166 IPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL 225
IP IG L L +L LS N L G F + V + N + +IP EIGN +L
Sbjct: 208 IPVSIGTLANLTDLDLSGNQLTGKIPRDFGNLLNLQSLV-LTENLLEGDIPAEIGNCSSL 266
Query: 226 EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS 285
L L N+L G IPAE+ N+ +Q + + N L+ S+ S + RL L L L NH
Sbjct: 267 VQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLF-RLTQLTHLGLSENHLV 325
Query: 286 GSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT-SLTLELSFL-- 342
G I I L L L N+F+G P + NLRNL L + N+++ L +L L
Sbjct: 326 GPISEEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTN 385
Query: 343 ----------------SSLSNCKYLEFIDLSSNSIDGILSRK---------SVG------ 371
SS+SNC L+ +DLS N + G + R S+G
Sbjct: 386 LRNLSAHDNLLTGPIPSSISNCTGLKLLDLSHNQMTGEIPRGFGRMNLTFISIGRNHFTG 445
Query: 372 --------------------NLSHSLK----------IFDMSDCNVSGSIPEEIGNLTNL 401
NL+ +LK I +S +++G IP EIGNL +L
Sbjct: 446 EIPDDIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPREIGNLKDL 505
Query: 402 IGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSG 461
YL N G IP + L LQ L N LEG IP+E+ + + LDLSNNK SG
Sbjct: 506 NILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFSG 565
Query: 462 SIPACFGDLASLRNLSLASNELISVIPSTFWNLK-----DI------------------- 497
IPA F L SL LSL N+ IP++ +L DI
Sbjct: 566 QIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLASLKN 625
Query: 498 --LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAI---------------- 539
LYLN S+N LTG +P E+G L+++ +ID S N FSG IP ++
Sbjct: 626 MQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNNL 685
Query: 540 -GGIKDLQF--------LFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590
G I D F L L N G IP SFG++ L SL+LS+NNL+G IP SL L
Sbjct: 686 SGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANL 745
Query: 591 SYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPC---KTSIQHTRR 647
S LK L L+ N L+G +P+ G F N +A GN LCGS + PC + S ++R
Sbjct: 746 STLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCGSKK-PLKPCTIKQKSSHFSKR 804
Query: 648 KNTIL--LGIFLPLSTIFMIAVILLIARNRKRGRQQPNDADMPQ---EATWRRFSYLELC 702
IL LG L + ++ +IL + +++ + +++ +P +RF EL
Sbjct: 805 TRVILIILGSAAALLLVLLLVLILTCCKKKEKKIENSSESSLPDLDSALKLKRFEPKELE 864
Query: 703 QATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIR 760
QATD F+ N+IG +VYK +++DG +AVKV N + + K F E + + ++
Sbjct: 865 QATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFSAESDKWFYTEAKTLSQLK 924
Query: 761 HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLY-SSNYILDIFQRLNIMIDVASA 819
HRN++KI+ KAL L +M +G+LE ++ S+ I + +++++ + +AS
Sbjct: 925 HRNLVKIL---GFAWESGKTKALVLPFMENGNLEDTIHGSAAPIGSLLEKIDLCVHIASG 981
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT-REDQFVTQTQTP--ATI 876
++YL+ GY P++HCDLKP+N+LL + VAH+SDFG ++L RED T + + TI
Sbjct: 982 IDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGFREDGSTTASTSAFEGTI 1041
Query: 877 GYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPT--NEIFNEGMTLKHWVNDWL---L 931
GY+A E+ +V+T DV++FG+++ME T ++PT N+ ++ MTL+ V +
Sbjct: 1042 GYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGR 1101
Query: 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+++++D L + I + +E+ + + + CT PE R + EI+T L+K+
Sbjct: 1102 KGMVRVLDMEL--GDSIVSLKQEEAIEDFLKLCLFCTSSRPEDRPDMNEILTHLMKL 1156
|
Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Flagellin-binding to the receptor is the first step to initiate the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6), resulting in enhanced resistance against pathogens. Binding to the effector AvrPto1 from Pseudomonas syringae blocks the downstream plant immune response. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust.
Identities = 342/989 (34%), Positives = 504/989 (50%), Gaps = 74/989 (7%)
Query: 65 LSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSN 124
L G IP L +L +LQ+L L +N +G IP +N+ L L +N LSG +P +ICSN
Sbjct: 275 LQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSN 334
Query: 125 LPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFN 184
E L LS G IP LS C L+ L LS N AG IP+ + L +L +LYL N
Sbjct: 335 NTNLEQLVLSGTQLSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELTDLYLHNN 394
Query: 185 GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF 244
L+G + V + HN + ++P EI LR LEVL L N+ G IP EI
Sbjct: 395 TLEGTLSPSISNLTNLQWLVLY-HNNLEGKLPKEISALRKLEVLFLYENRFSGEIPQEIG 453
Query: 245 NMSTIQGVGLQNNSLSGSLQSIPYV-RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLEL 303
N ++++ + + N G + P + RL L L+L N G +P + N +L+ L+L
Sbjct: 454 NCTSLKMIDMFGNHFEGEIP--PSIGRLKELNLLHLRQNELVGGLPASLGNCHQLNILDL 511
Query: 304 QKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDG 363
N SG IPS+FG L+ L++L L NN +L+ + SL + + L I+LS N ++G
Sbjct: 512 ADNQLSGSIPSSFGFLKGLEQLMLYNN-----SLQGNLPDSLISLRNLTRINLSHNRLNG 566
Query: 364 ILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQ 423
+ G S S FD+++ IP E+GN NL LG N L G IP TLGK++
Sbjct: 567 TI-HPLCG--SSSYLSFDVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWTLGKIR 623
Query: 424 KLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNEL 483
+L +L N L G+IP ++ K+ +DL+NN LSG IP G L+ L L L+SN+
Sbjct: 624 ELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQLGELKLSSNQF 683
Query: 484 ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIK 543
+ +P+ +N +L L+L NSL G +P EIGNL L ++ N FSG +P A+G +
Sbjct: 684 VESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNLGALNVLNLDKNQFSGSLPQAMGKLS 743
Query: 544 DLQFLFLEYNILQGSIPDSFGDLMSLKS-LNLSNNNLSGSIPVSLEKLSYLKDLNLSFNK 602
L L L N L G IP G L L+S L+LS NN +G IP ++ LS L+ L+LS N+
Sbjct: 744 KLYELRLSRNSLTGEIPVEIGQLQDLQSALDLSYNNFTGDIPSTIGTLSKLETLDLSHNQ 803
Query: 603 LEGEIPK------------------GG----SFGNFSAESFEGNKLLCGSPNLHVPPCKT 640
L GE+P GG F + A+SF GN LCGSP ++
Sbjct: 804 LTGEVPGSVGDMKSLGYLNVSFNNLGGKLKKQFSRWPADSFLGNTGLCGSPLSRCNRVRS 863
Query: 641 S--IQHTRRKNTILLGIFLPLSTI-FMIAVILLIARNRK-------RGRQQPNDADMPQE 690
+ Q ++ +++ L+ I MI VI L + R G + +
Sbjct: 864 NNKQQGLSARSVVIISAISALTAIGLMILVIALFFKQRHDFFKKVGHGSTAYTSSSSSSQ 923
Query: 691 ATWR----------RFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAV-KVFN 739
AT + + ++ +AT SE +IG GG G VYKA +++G VAV K+
Sbjct: 924 ATHKPLFRNGASKSDIRWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILW 983
Query: 740 QQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS 799
+ + KSF E + + IRHR+++K++ CS L EYM +GS+ +L+
Sbjct: 984 KDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCS--SKSEGLNLLIYEYMKNGSIWDWLHE 1041
Query: 800 SNYI-------LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLS 852
+ LD RL I + +A +EYL+ P++H D+K SNVLL NM AHL
Sbjct: 1042 DKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLG 1101
Query: 853 DFGITKLLTREDQFVTQTQT--PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKK 910
DFG+ K+LT T + T + GY+A EY + + DVY+ G++LME TGK
Sbjct: 1102 DFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKM 1161
Query: 911 PTNEIFNEGMTLKHWVNDWLLISIM---KIVDGSLLSREDIQFVAKEQCMSFVFNMAMEC 967
PT+ +F M + WV L ++ K++D L + + F C V +A++C
Sbjct: 1162 PTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKL--KPLLPFEEDAACQ--VLEIALQC 1217
Query: 968 TVESPEKRINAKEIVTRLLKINDLDFNGY 996
T SP++R ++++ LL + + GY
Sbjct: 1218 TKTSPQERPSSRQACDSLLHVYNNRTAGY 1246
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 332/991 (33%), Positives = 502/991 (50%), Gaps = 78/991 (7%)
Query: 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114
+ LN+ L G IP RL L++LQ+L L SN +G I + ++ L+ L N+LS
Sbjct: 266 IQYLNLIGNQLQGLIPKRLTELANLQTLDLSSNNLTGVIHEEFWRMNQLEFLVLAKNRLS 325
Query: 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT 174
G +P ICSN + L LS+ G IP+ +SNC L++L LS N G IP + L
Sbjct: 326 GSLPKTICSNNTSLKQLFLSETQLSGEIPAEISNCQSLKLLDLSNNTLTGQIPDSLFQLV 385
Query: 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK 234
+L LYL+ N L+G + F + HN + ++P EIG L LE++ L N+
Sbjct: 386 ELTNLYLNNNSLEGTLSSSISNLTNLQEFTLY-HNNLEGKVPKEIGFLGKLEIMYLYENR 444
Query: 235 LVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294
G +P EI N + +Q + N LSG + S RL +L L+L N G+IP + N
Sbjct: 445 FSGEMPVEIGNCTRLQEIDWYGNRLSGEIPS-SIGRLKDLTRLHLRENELVGNIPASLGN 503
Query: 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFI 354
+++ ++L N SG IPS+FG L L+ + NN +L+ + SL N K L I
Sbjct: 504 CHQMTVIDLADNQLSGSIPSSFGFLTALELFMIYNN-----SLQGNLPDSLINLKNLTRI 558
Query: 355 DLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGS 414
+ SSN +G +S S S FD+++ G IP E+G TNL LG N G
Sbjct: 559 NFSSNKFNGSISPLCG---SSSYLSFDVTENGFEGDIPLELGKSTNLDRLRLGKNQFTGR 615
Query: 415 IPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474
IP T GK+ +L +L N L G IP E+ K+ +DL+NN LSG IP G L L
Sbjct: 616 IPRTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLG 675
Query: 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGV 534
L L+SN+ + +P+ ++L +IL L L NSL G +P EIGNL+ L ++ N SG
Sbjct: 676 ELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGP 735
Query: 535 IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKS-LNLSNNNLSGSIPVSLEKLSYL 593
+P+ IG + L L L N L G IP G L L+S L+LS NN +G IP ++ L L
Sbjct: 736 LPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKL 795
Query: 594 KDLNLSFNKLEGEIPK----------------------GGSFGNFSAESFEGNKLLCGSP 631
+ L+LS N+L GE+P F + A++F GN LCGSP
Sbjct: 796 ESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKKQFSRWQADAFVGNAGLCGSP 855
Query: 632 NLHVPPCKTSIQHT-RRKNTILLGIFLPLSTI-FMIAVILLIARN------RKRG----- 678
H + Q + K +++ L+ I M+ VI+L + + RG
Sbjct: 856 LSHCNRAGSKNQRSLSPKTVVIISAISSLAAIALMVLVIILFFKQNHDLFKKVRGGNSAF 915
Query: 679 ------RQQP--NDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDG 730
Q P ++ + W ++ +AT +E +IG GG G VYKA +++G
Sbjct: 916 SSNSSSSQAPLFSNGGAKSDIKWD-----DIMEATHYLNEEFMIGSGGSGKVYKAELKNG 970
Query: 731 MEVAVK-VFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789
+AVK + + + KSF+ E + + +IRHR+++K++ CS L EYM
Sbjct: 971 ETIAVKKILWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCS--SKADGLNLLIYEYMA 1028
Query: 790 HGSLEKYLYSS-----NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844
+GS+ +L+++ +L RL I + +A +EYL++ P++H D+K SNVLL
Sbjct: 1029 NGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLD 1088
Query: 845 DNMVAHLSDFGITKLLTREDQFVTQTQT--PATIGYMALEYGSEGRVSTNGDVYNFGVML 902
N+ AHL DFG+ K+LT T++ T + GY+A EY + + DVY+ G++L
Sbjct: 1089 SNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVL 1148
Query: 903 METFTGKKPTNEIFNEGMTLKHWVNDWLLI-----SIMKIVDGSLLSREDIQFVAKEQCM 957
ME TGK PT +F+E + WV L + K++D L S +E+
Sbjct: 1149 MEIVTGKMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDSELKSL----LPCEEEAA 1204
Query: 958 SFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
V +A++CT P++R ++++ LL +
Sbjct: 1205 YQVLEIALQCTKSYPQERPSSRQASEYLLNV 1235
|
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 327/936 (34%), Positives = 486/936 (51%), Gaps = 118/936 (12%)
Query: 131 LNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK-LEELYLSFNGLQGA 189
L++S G I +++N T L +L LS N F G IP EIG+L + L++L LS N L G
Sbjct: 71 LDISGRDLGGEISPSIANLTGLTVLDLSRNFFVGKIPPEIGSLHETLKQLSLSENLLHG- 129
Query: 190 YDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF---NM 246
IP E+G L L L LG N+L G IP ++F +
Sbjct: 130 ------------------------NIPQELGLLNRLVYLDLGSNRLNGSIPVQLFCNGSS 165
Query: 247 STIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKN 306
S++Q + L NNSL+G + + L L L LW N +G++P+ + N++ L ++L+ N
Sbjct: 166 SSLQYIDLSNNSLTGEIPLNYHCHLKELRFLLLWSNKLTGTVPSSLSNSTNLKWMDLESN 225
Query: 307 SFSGFIPS-TFGNLRNLKRLGLNNNHLTS----LTLELSFLSSLSNCKYLEFIDLSSNSI 361
SG +PS + L+ L L+ NH S LE F +SL+N L+ ++L+ NS+
Sbjct: 226 MLSGELPSQVISKMPQLQFLYLSYNHFVSHNNNTNLE-PFFASLANSSDLQELELAGNSL 284
Query: 362 DGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIG------------------------N 397
G ++ SV +LS +L + + GSIP EI
Sbjct: 285 GGEIT-SSVRHLSVNLVQIHLDQNRIHGSIPPEISNLLNLTLLNLSSNLLSGPIPRELCK 343
Query: 398 LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNN 457
L+ L YL N+L G IP+ LG + +L +L N L GSIPD L+++ +L L N
Sbjct: 344 LSKLERVYLSNNHLTGEIPMELGDIPRLGLLDVSRNNLSGSIPDSFGNLSQLRRLLLYGN 403
Query: 458 KLSGSIPACFGDLASLRNLSLASNELISVIP----STFWNLKDILYLNLSSNSLTGPLPL 513
LSG++P G +L L L+ N L IP S NLK LYLNLSSN L+GP+PL
Sbjct: 404 HLSGTVPQSLGKCINLEILDLSHNNLTGTIPVEVVSNLRNLK--LYLNLSSNHLSGPIPL 461
Query: 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLN 573
E+ + +++ +D S N SG IP +G L+ L L N ++P S G L LK L+
Sbjct: 462 ELSKMDMVLSVDLSSNELSGKIPPQLGSCIALEHLNLSRNGFSSTLPSSLGQLPYLKELD 521
Query: 574 LSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNL 633
+S N L+G+IP S ++ S LK LN SFN L G + GSF + ESF G+ LLCGS
Sbjct: 522 VSFNRLTGAIPPSFQQSSTLKHLNFSFNLLSGNVSDKGSFSKLTIESFLGDSLLCGSIK- 580
Query: 634 HVPPCKTSIQH-TRRKNTILLGIFLPLSTIFMIAVILLIARNR--------------KRG 678
+ CK ++ + +L I P+ +F L+ R+R
Sbjct: 581 GMQACKKKHKYPSVLLPVLLSLIATPVLCVFGYP---LVQRSRFGKNLTVYAKEEVEDEE 637
Query: 679 RQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVF 738
+Q ND P R SY +L AT GF+ ++LIG G FG VYK +++ +VAVKV
Sbjct: 638 KQNQNDPKYP------RISYQQLIAATGGFNASSLIGSGRFGHVYKGVLRNNTKVAVKVL 691
Query: 739 NQQCGRAFK-SFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYL 797
+ + F SF EC+++K RHRN+I+II+ CS K F AL L MP+GSLE++L
Sbjct: 692 DPKTALEFSGSFKRECQILKRTRHRNLIRIITTCS----KPGFNALVLPLMPNGSLERHL 747
Query: 798 YSSNYI---LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854
Y Y LD+ Q +NI DVA + YL+ V+HCDLKPSN+LL D M A ++DF
Sbjct: 748 YPGEYSSKNLDLIQLVNICSDVAEGIAYLHHYSPVKVVHCDLKPSNILLDDEMTALVTDF 807
Query: 855 GITKLLTREDQFVTQTQTPA----------TIGYMALEYGSEGRVSTNGDVYNFGVMLME 904
GI++L+ ++ V+ + + ++GY+A EYG R ST+GDVY+FGV+L+E
Sbjct: 808 GISRLVQGVEETVSTDDSVSFGSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLE 867
Query: 905 TFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSF----- 959
+G++PT+ + NEG +L ++ S+ I++ + LSR Q E+C
Sbjct: 868 IVSGRRPTDVLVNEGSSLHEFMKSHYPDSLEGIIEQA-LSRWKPQG-KPEKCEKLWREVI 925
Query: 960 --VFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993
+ + + CT +P R + ++ + ++ + F
Sbjct: 926 LEMIELGLVCTQYNPSTRPDMLDVAHEMGRLKEYLF 961
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M2Z1|BAME2_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust.
Identities = 336/999 (33%), Positives = 498/999 (49%), Gaps = 80/999 (8%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTI 69
T+L AL +LK+ T D + +WN S +FC+WTGVTCDV VT+L++S L+LSGT+
Sbjct: 26 TELHALLSLKSSFTIDEHSPLLTSWNLSTTFCSWTGVTCDVSLRHVTSLDLSGLNLSGTL 85
Query: 70 PSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFE 129
S + +L LQ+L L +NQ SG IP I N++ L+ L+ +N +G P + S L
Sbjct: 86 SSDVAHLPLLQNLSLAANQISGPIPPQISNLYELRHLNLSNNVFNGSFPDELSSGLVNLR 145
Query: 130 SLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA 189
L+L N G +P +L+N T LR L L N F+G IP G LE L +S N L G
Sbjct: 146 VLDLYNNNLTGDLPVSLTNLTQLRHLHLGGNYFSGKIPATYGTWPVLEYLAVSGNELTG- 204
Query: 190 YDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL-NKLVGVIPAEIFNMST 248
+IP EIGNL L L +G N +P EI N+S
Sbjct: 205 ------------------------KIPPEIGNLTTLRELYIGYYNAFENGLPPEIGNLSE 240
Query: 249 IQGVGLQNNSLSGSLQSIPYV-RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNS 307
+ N L+G + P + +L L+ L+L N F+G+I + S L ++L N
Sbjct: 241 LVRFDAANCGLTGEIP--PEIGKLQKLDTLFLQVNAFTGTITQELGLISSLKSMDLSNNM 298
Query: 308 FSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSR 367
F+G IP++F L+NL L L N L E + LE + L N+ G + +
Sbjct: 299 FTGEIPTSFSQLKNLTLLNLFRNKLYGAIPEF-----IGEMPELEVLQLWENNFTGSIPQ 353
Query: 368 KSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQV 427
K N L I D+S ++G++P + + L+ GN L GSIP +LGK + L
Sbjct: 354 KLGEN--GRLVILDLSSNKLTGTLPPNMCSGNRLMTLITLGNFLFGSIPDSLGKCESLTR 411
Query: 428 LYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLA-SLRNLSLASNELISV 486
+ +N L GSIP E+ L K+ Q++L +N L+G +P G ++ L +SL++N+L
Sbjct: 412 IRMGENFLNGSIPKELFGLPKLSQVELQDNYLTGELPISGGGVSGDLGQISLSNNQLSGS 471
Query: 487 IPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQ 546
+P+ NL + L L N +G +P EIG L+ L K+DFS N FSG I I K L
Sbjct: 472 LPAAIGNLSGVQKLLLDGNKFSGSIPPEIGRLQQLSKLDFSHNLFSGRIAPEISRCKLLT 531
Query: 547 FLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606
F+ L N L G IP+ + L LNLS N+L GSIPV++ + L ++ S+N L G
Sbjct: 532 FVDLSRNELSGDIPNELTGMKILNYLNLSRNHLVGSIPVTIASMQSLTSVDFSYNNLSGL 591
Query: 607 IPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQHTRRKNTILLGIFLPLSTI---- 662
+P G F F+ SF GN LCG ++ PC + K PLS
Sbjct: 592 VPSTGQFSYFNYTSFVGNSHLCGP---YLGPCGKGTHQSHVK---------PLSATTKLL 639
Query: 663 ------FMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLELCQAT-DGFSENNLIG 715
F V ++A + R + ++A + ++R + C D E+N+IG
Sbjct: 640 LVLGLLFCSMVFAIVAIIKARSLRNASEAKAWRLTAFQRLDF--TCDDVLDSLKEDNIIG 697
Query: 716 RGGFGSVYKARIQDGMEVAVK-VFNQQCGRAF-KSFDVECEVMKSIRHRNIIKIISCCSI 773
+GG G VYK + G VAVK + G + F+ E + + IRHR+I++++ CS
Sbjct: 698 KGGAGIVYKGTMPKGDLVAVKRLATMSHGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSN 757
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+ L EYMP+GSL + L+ L R I ++ A L YL+ S ++
Sbjct: 758 HE----TNLLVYEYMPNGSLGEVLHGKKGGHLHWNTRYKIALEAAKGLCYLHHDCSPLIV 813
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H D+K +N+LL N AH++DFG+ K L + + GY+A EY +V
Sbjct: 814 HRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEK 873
Query: 893 GDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV---NDWLLISIMKIVDGSLLSREDIQ 949
DVY+FGV+L+E TGKKP E F +G+ + WV D ++K++D L S
Sbjct: 874 SDVYSFGVVLLELITGKKPVGE-FGDGVDIVQWVRSMTDSNKDCVLKVIDLRLSS----- 927
Query: 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
++ VF +A+ C E +R +E+V L +I
Sbjct: 928 --VPVHEVTHVFYVALLCVEEQAVERPTMREVVQILTEI 964
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 331/1035 (31%), Positives = 503/1035 (48%), Gaps = 107/1035 (10%)
Query: 33 NWNS--SISFCNWTGVTC---------DVHS--------------HRVTALNISHLSLSG 67
NWNS + NWT +TC D+ S + L IS +L+G
Sbjct: 60 NWNSIDNTPCNNWTFITCSSQGFITDIDIESVPLQLSLPKNLPAFRSLQKLTISGANLTG 119
Query: 68 TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNI--CSNL 125
T+P LG+ L+ L L SN G IP+S+ + L+ L NQL+G+IP +I CS L
Sbjct: 120 TLPESLGDCLGLKVLDLSSNGLVGDIPWSLSKLRNLETLILNSNQLTGKIPPDISKCSKL 179
Query: 126 PFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYN-DFAGGIPKEIGNLTKLEELYLSFN 184
+SL L N+ G IP+ L + L ++R+ N + +G IP EIG+ + L L L+
Sbjct: 180 ---KSLILFDNLLTGSIPTELGKLSGLEVIRIGGNKEISGQIPSEIGDCSNLTVLGLAET 236
Query: 185 GLQGAYDHGF--------LQIFVKNIFVQFSHNFSKCE---------------IPNEIGN 221
+ G L I+ I + + C IP EIG
Sbjct: 237 SVSGNLPSSLGKLKKLETLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSGSIPREIGQ 296
Query: 222 LRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWG 281
L LE L L N LVG IP EI N S ++ + L N LSGS+ S RL LEE +
Sbjct: 297 LTKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPS-SIGRLSFLEEFMISD 355
Query: 282 NHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSF 341
N FSGSIP I N S L +L+L KN SG IPS G L L +N L E S
Sbjct: 356 NKFSGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWSNQL-----EGSI 410
Query: 342 LSSLSNCKYLEFIDLSSNSIDGILSRK--SVGNLSHSLKIFDMSDCNVSGSIPEEIGNLT 399
L++C L+ +DLS NS+ G + + NL+ L I + ++SG IP+EIGN +
Sbjct: 411 PPGLADCTDLQALDLSRNSLTGTIPSGLFMLRNLTKLLLISN----SLSGFIPQEIGNCS 466
Query: 400 NLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKL 459
+L+ LG N + G IP +G L+K+ L F N+L G +PDE+ +++ +DLSNN L
Sbjct: 467 SLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSL 526
Query: 460 SGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLK 519
GS+P L+ L+ L +++N+ IP++ L + L LS N +G +P +G
Sbjct: 527 EGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCS 586
Query: 520 VLVKIDFSMNNFSGVIPNAIGGIKDLQF-LFLEYNILQGSIPDSFGDLMSLKSLNLSNNN 578
L +D N SG IP+ +G I++L+ L L N L G IP L L L+LS+N
Sbjct: 587 GLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNM 646
Query: 579 LSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPC 638
L G + L + L LN+S+N G +P F S + EGNK LC S C
Sbjct: 647 LEGDL-APLANIENLVSLNISYNSFSGYLPDNKLFRQLSPQDLEGNKKLCSSTQ---DSC 702
Query: 639 KTSIQH-----------TRRKNTILLGIFLPLSTIFMIAVILLIARNRKRGRQQPNDADM 687
+ + RK + L + + L+ + MI + + R R R D+++
Sbjct: 703 FLTYRKGNGLGDDGDASRTRKLRLTLALLITLTVVLMILGAVAVIRAR-RNIDNERDSEL 761
Query: 688 PQEATWRRFSYLELCQATDG----FSENNLIGRGGFGSVYKARIQDGMEVAVKVF----- 738
+ W+ + +L + D E N+IG+G G VY+A + +G +AVK
Sbjct: 762 GETYKWQFTPFQKLNFSVDQIIRCLVEPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMV 821
Query: 739 ----NQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLE 794
+++ SF E + + +IRH+NI++ + CC + + L +YMP+GSL
Sbjct: 822 NGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCC----WNRNTRLLMYDYMPNGSLG 877
Query: 795 KYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853
L+ LD R I++ A L YL+ P++H D+K +N+L+G + +++D
Sbjct: 878 SLLHERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIAD 937
Query: 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTN 913
FG+ KL+ D + GY+A EYG +++ DVY++GV+++E TGK+P +
Sbjct: 938 FGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID 997
Query: 914 EIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPE 973
EG+ L WV ++++D +L SR + A+ M V A+ C SP+
Sbjct: 998 PTVPEGIHLVDWVRQNR--GSLEVLDSTLRSRTE----AEADEMMQVLGTALLCVNSSPD 1051
Query: 974 KRINAKEIVTRLLKI 988
+R K++ L +I
Sbjct: 1052 ERPTMKDVAAMLKEI 1066
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 336/1011 (33%), Positives = 492/1011 (48%), Gaps = 82/1011 (8%)
Query: 5 TSNITTDLDALHALKTHITN--DPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISH 62
S ++ AL +LKT +T D N +W S SFC W GVTCDV VT+L++S
Sbjct: 19 ASRPISEFRALLSLKTSLTGAGDDKNSPLSSWKVSTSFCTWIGVTCDVSRRHVTSLDLSG 78
Query: 63 LSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNIC 122
L+LSGT+ + +L LQ+L L N SG IP I ++ L+ L+ +N +G P I
Sbjct: 79 LNLSGTLSPDVSHLRLLQNLSLAENLISGPIPPEISSLSGLRHLNLSNNVFNGSFPDEIS 138
Query: 123 SNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLS 182
S L L++ N G +P +++N T LR L L N FAG IP G+ +E L +S
Sbjct: 139 SGLVNLRVLDVYNNNLTGDLPVSVTNLTQLRHLHLGGNYFAGKIPPSYGSWPVIEYLAVS 198
Query: 183 FNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL-NKLVGVIPA 241
N L G +IP EIGNL L L +G N +P
Sbjct: 199 GNELVG-------------------------KIPPEIGNLTTLRELYIGYYNAFEDGLPP 233
Query: 242 EIFNMSTIQGVGLQNNSLSGSLQSIPYV-RLPNLEELYLWGNHFSGSIPNFIFNASKLSR 300
EI N+S + N L+G + P + +L L+ L+L N FSG + + S L
Sbjct: 234 EIGNLSELVRFDGANCGLTGEIP--PEIGKLQKLDTLFLQVNVFSGPLTWELGTLSSLKS 291
Query: 301 LELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNS 360
++L N F+G IP++F L+NL L L N L E + + LE + L N+
Sbjct: 292 MDLSNNMFTGEIPASFAELKNLTLLNLFRNKLHGEIPEF-----IGDLPELEVLQLWENN 346
Query: 361 IDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLG 420
G + +K N L + D+S ++G++P + + L GN L GSIP +LG
Sbjct: 347 FTGSIPQKLGEN--GKLNLVDLSSNKLTGTLPPNMCSGNKLETLITLGNFLFGSIPDSLG 404
Query: 421 KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLAS 480
K + L + +N L GSIP + L K+ Q++L +N LSG +P G +L +SL++
Sbjct: 405 KCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGELPVAGGVSVNLGQISLSN 464
Query: 481 NELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIG 540
N+L +P N + L L N GP+P E+G L+ L KIDFS N FSG I I
Sbjct: 465 NQLSGPLPPAIGNFTGVQKLLLDGNKFQGPIPSEVGKLQQLSKIDFSHNLFSGRIAPEIS 524
Query: 541 GIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSF 600
K L F+ L N L G IP+ + L LNLS N+L GSIP S+ + L L+ S+
Sbjct: 525 RCKLLTFVDLSRNELSGEIPNEITAMKILNYLNLSRNHLVGSIPGSISSMQSLTSLDFSY 584
Query: 601 NKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSI----QHTRRKNTILLGI- 655
N L G +P G F F+ SF GN LCG ++ PCK + + K + +
Sbjct: 585 NNLSGLVPGTGQFSYFNYTSFLGNPDLCGP---YLGPCKDGVAKGGHQSHSKGPLSASMK 641
Query: 656 -----FLPLSTIFMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLEL---CQAT-D 706
L + +I V ++ AR+ K+ + WR ++ L C D
Sbjct: 642 LLLVLGLLVCSIAFAVVAIIKARSLKKASES---------RAWRLTAFQRLDFTCDDVLD 692
Query: 707 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNI 764
E+N+IG+GG G VYK + +G VAVK + F+ E + + IRHR+I
Sbjct: 693 SLKEDNIIGKGGAGIVYKGVMPNGDLVAVKRLAAMSRGSSHDHGFNAEIQTLGRIRHRHI 752
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYL 823
++++ CS + L EYMP+GSL + L+ L R I ++ A L YL
Sbjct: 753 VRLLGFCSNHE----TNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIALEAAKGLCYL 808
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY 883
+ S ++H D+K +N+LL N AH++DFG+ K L + + GY+A EY
Sbjct: 809 HHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEY 868
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV---NDWLLISIMKIVDG 940
+V DVY+FGV+L+E TG+KP E F +G+ + WV D S++K++D
Sbjct: 869 AYTLKVDEKSDVYSFGVVLLELVTGRKPVGE-FGDGVDIVQWVRKMTDSNKDSVLKVLD- 926
Query: 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991
LS I V + VF +AM C E +R +E+V L +I L
Sbjct: 927 PRLSSIPIHEV------THVFYVAMLCVEEQAVERPTMREVVQILTEIPKL 971
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1002 | ||||||
| 359483198 | 1087 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.895 | 0.486 | 0.0 | |
| 224139658 | 1019 | predicted protein [Populus trichocarpa] | 0.974 | 0.957 | 0.483 | 0.0 | |
| 359483685 | 1046 | PREDICTED: LRR receptor-like serine/thre | 0.964 | 0.923 | 0.475 | 0.0 | |
| 359483677 | 1229 | PREDICTED: LRR receptor-like serine/thre | 0.917 | 0.747 | 0.493 | 0.0 | |
| 359485453 | 1202 | PREDICTED: probable LRR receptor-like se | 0.910 | 0.758 | 0.489 | 0.0 | |
| 255578886 | 1043 | serine-threonine protein kinase, plant-t | 0.949 | 0.911 | 0.476 | 0.0 | |
| 359497186 | 1140 | PREDICTED: LRR receptor-like serine/thre | 0.900 | 0.791 | 0.491 | 0.0 | |
| 359483683 | 1228 | PREDICTED: LRR receptor-like serine/thre | 0.889 | 0.725 | 0.504 | 0.0 | |
| 255572272 | 1089 | serine-threonine protein kinase, plant-t | 0.880 | 0.809 | 0.500 | 0.0 | |
| 147776333 | 1205 | hypothetical protein VITISV_000078 [Viti | 0.889 | 0.739 | 0.494 | 0.0 |
| >gi|359483198|ref|XP_002271405.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1057 (48%), Positives = 662/1057 (62%), Gaps = 84/1057 (7%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTI 69
TD +L ALK HIT DP + A NW++ SFC W GV+C+ RV AL++S+L L GTI
Sbjct: 31 TDQSSLLALKAHITLDPHHVLAGNWSTKTSFCEWIGVSCNAQQQRVIALDLSNLGLRGTI 90
Query: 70 PSRLGNLS------------------------------------------------SLQS 81
P LGNLS LQS
Sbjct: 91 PPDLGNLSFLVSLDLSSNNFHGPVPVEVGQLTSLLSMNLQYNLLSGQIPPSFGNLNRLQS 150
Query: 82 LFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGG 141
LFL +N F+G+IP SI N+ L+ L G N L G IP I L + L++ N G
Sbjct: 151 LFLGNNSFTGTIPPSIGNMSMLETLGLGGNHLQGNIPEEI-GKLSTMKILDIQSNQLVGA 209
Query: 142 IPSALSN----------------------CTY----LRILRLSYNDFAGGIPKEIGNLTK 175
IPSA+ N C + LR +RLS N F G IP + +
Sbjct: 210 IPSAIFNISSLQEIALTYNSLSGDLPSSMCNHELSALRGIRLSANRFTGPIPSNLSKCGE 269
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
L+ LYLSFN G + K + + N E+P EIG+L L VL + N L
Sbjct: 270 LQTLYLSFNKFTGGIPRS-IDSLTKLTMLSLAANSLSGEVPCEIGSLCTLNVLNIEDNSL 328
Query: 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295
G IP +IFN+S++ L N+LSG+L LPNLE L L N SG IP+ I NA
Sbjct: 329 TGHIPFQIFNISSMVSGSLTRNNLSGNLPPNFGSYLPNLENLILEINWLSGIIPSSIGNA 388
Query: 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKR--LGLNNNHLTSLTLELSFLSSLSNCKYLEF 353
SKL L+ N +G IP G+LR L+R LG+NN S ELSFL+SL+NCK L
Sbjct: 389 SKLRSLDFGYNMLTGSIPHALGSLRFLERLNLGVNNLKGESYIQELSFLTSLTNCKRLRI 448
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
+ LS N + GIL S+GNLS SL+ F+ + C + G+IP EIGNL+NL L N+L G
Sbjct: 449 LYLSFNPLIGILP-ISIGNLSTSLQRFEANTCKLKGNIPTEIGNLSNLYLLSLNNNDLTG 507
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
+IP ++G+LQKLQ LY P NKL+GSIP+++C+L + +L L+NN+LSGSIPAC G+L L
Sbjct: 508 TIPPSIGQLQKLQGLYLPSNKLQGSIPNDICQLRNLGELFLTNNQLSGSIPACLGELTFL 567
Query: 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533
R+L L SN+L S IPST W+L IL L++SSN L G LP ++GNLKVLVKID S N SG
Sbjct: 568 RHLYLGSNKLNSTIPSTLWSLIHILSLDMSSNFLVGYLPSDMGNLKVLVKIDLSRNQLSG 627
Query: 534 VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYL 593
IP+ IGG++DL L L +N +G I SF +L SL+ ++LS+N L G IP SLE L YL
Sbjct: 628 EIPSNIGGLQDLTSLSLAHNRFEGPILHSFSNLKSLEFMDLSDNALFGEIPKSLEGLVYL 687
Query: 594 KDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQHTRRKNTILL 653
K L++SFN L GEIP G F NFSAESF NK LCGSP L +PPC+T + + + +LL
Sbjct: 688 KYLDVSFNGLYGEIPPEGPFANFSAESFMMNKALCGSPRLKLPPCRTGTRWSTTISWLLL 747
Query: 654 GIFLP--LSTIFMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSEN 711
LP LST+ +A+I + R RKR P ++ ATWRR SY E+ QAT+GFS
Sbjct: 748 KYILPAILSTLLFLALIFVWTRCRKRNAVLPTQSESLLTATWRRISYQEIFQATNGFSAG 807
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
NL+GRG GSVY+ + DG A+KVFN Q AFKSFD ECEVM IRHRN+IKI+S C
Sbjct: 808 NLLGRGSLGSVYRGTLSDGKNAAIKVFNLQEEAAFKSFDAECEVMHHIRHRNLIKIVSSC 867
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
S FKAL LEY+P+GSLE++LYS NY LDI QRLNIMIDVA A+EYL+ G STPV
Sbjct: 868 SNSYID--FKALVLEYVPNGSLERWLYSHNYCLDILQRLNIMIDVALAMEYLHHGCSTPV 925
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVST 891
+HCDLKPSN+LL ++ H+ DFGI KLL RE++ + +TQT ATIGYMA +Y S G V+T
Sbjct: 926 VHCDLKPSNILLDEDFGGHVGDFGIAKLL-REEESIRETQTLATIGYMAPKYVSNGIVTT 984
Query: 892 NGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFV 951
+GDVY++G++LMETFT ++PT+EIF+E M++K+WV DWL SI ++VD +LL ED QF+
Sbjct: 985 SGDVYSYGIVLMETFTRRRPTDEIFSEEMSMKNWVWDWLCGSITEVVDANLLRGEDEQFM 1044
Query: 952 AKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
AK+QC+S + +AM+C +SPE+RI K++VT L KI
Sbjct: 1045 AKKQCISLILGLAMDCVADSPEERIKMKDVVTTLKKI 1081
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224139658|ref|XP_002323215.1| predicted protein [Populus trichocarpa] gi|222867845|gb|EEF04976.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/989 (48%), Positives = 634/989 (64%), Gaps = 13/989 (1%)
Query: 5 TSNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLS 64
TSN T D AL A K HIT DP N +W+S SFCNW GV+C + RVTAL++S +
Sbjct: 26 TSNFT-DQSALLAFKDHITFDPQNMLTHSWSSKTSFCNWMGVSCSLRRQRVTALDLSSMG 84
Query: 65 LSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSN 124
L GTIP +LGNLS LQ L L++N F G +P I N+ L+++ G N+LS I N
Sbjct: 85 LLGTIPPQLGNLSFLQYLILYNNSFHGDLPSEIGNLRRLQVMDIGSNKLSLVIVPESFGN 144
Query: 125 LPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSF 183
L E L N G IPS + N + L++L L +N G +PK + +L +LE L LS
Sbjct: 145 LHRLEELRFDGNNLTGTIPSTIFNISSLKVLDLMFNGLFGSLPKNMCDHLPRLEMLLLSS 204
Query: 184 NGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEI 243
N L G + + +NF+ IP E+G L LEVL LG+N L G +P I
Sbjct: 205 NQLSGQIPSDLFKCRELQLLWLPYNNFTGV-IPEELGFLPMLEVLNLGVNMLSGDLPRSI 263
Query: 244 FNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLEL 303
FNM++++ + + N+LSGS+ + LPNLEEL L N +GS+P F+ N S+L L+L
Sbjct: 264 FNMTSLRTMQICCNNLSGSIPQENSIDLPNLEELQLNLNGITGSMPRFLGNMSRLEILDL 323
Query: 304 QKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL--TLELSFLSSLSNCKYLEFIDLSSNSI 361
N +G + FGNLR L+ L L +N T+ + L+F++SL+N + L+ + + N +
Sbjct: 324 SYNKMTGNVLQEFGNLRALQVLSLQSNSFTNHPSSQTLNFITSLTNSRQLKELHIGDNPL 383
Query: 362 DGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGK 421
DG+L SVGNLS L F + + G+IP EIGNL+NLI L N+L G IP T+G
Sbjct: 384 DGMLP-NSVGNLSSFLTKFYVYASKLKGNIPGEIGNLSNLIVLSLEENSLMGPIPTTVGG 442
Query: 422 LQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASN 481
L+K+QVLY N L GSIP ++C ++ + L+NN LSG IP+C G+L SLRNL L N
Sbjct: 443 LRKIQVLYLHKNNLNGSIPSDICLARRLVDITLNNNVLSGEIPSCIGNLTSLRNLYLHFN 502
Query: 482 ELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGG 541
L S IP W+LKD+L LNL SN L G LP ++G ++ + I S N SG IP+ IG
Sbjct: 503 ILSSTIPMALWSLKDLLILNLHSNFLYGSLPSQVGEMEAAIGIRLSSNQLSGNIPSTIGS 562
Query: 542 IKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFN 601
+++L L N QGSIP++FG L+SL+ L+LS NNLSG IP SLE L YL+ ++SFN
Sbjct: 563 LQNLIRFSLSKNSFQGSIPEAFGGLVSLELLDLSQNNLSGEIPKSLEALRYLEFFSVSFN 622
Query: 602 KLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQHTRRKNTILLGIFLPL-- 659
L+GEIP+GG F NF+A SF NK LCG L VPPC + + + LL LP
Sbjct: 623 GLQGEIPRGGPFANFTARSFIMNKGLCGPSRLQVPPCSIESRKDSKTKSRLLRFSLPTVA 682
Query: 660 STIFMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGF 719
S + ++A I L+ R+R R+ P +P A RR SYLEL AT+ F E+NL+G G F
Sbjct: 683 SILLVVAFIFLVMGCRRRYRKDPIPEALPVTAIQRRISYLELLHATNEFHESNLLGIGSF 742
Query: 720 GSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779
GSVY+ R++DG+ VAVK+FN Q RAF+SFD ECE+M++IRHRN++KII CS D
Sbjct: 743 GSVYQGRLRDGLNVAVKIFNLQLQRAFRSFDTECEIMRNIRHRNLVKIICSCSNLD---- 798
Query: 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839
FKAL LEYMP GSLEK+LYS NY LDI QR+NIMIDVASALEYL+ GY +PV+HCDLKPS
Sbjct: 799 FKALVLEYMPKGSLEKWLYSHNYCLDIIQRVNIMIDVASALEYLHHGYPSPVVHCDLKPS 858
Query: 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFG 899
NVLL ++MVAH+ DFGI KLL + F QT+T ATIGYMA EYG +G VST DVY+FG
Sbjct: 859 NVLLDEDMVAHVCDFGIAKLLGENESF-AQTRTLATIGYMAPEYGLDGLVSTKIDVYSFG 917
Query: 900 VMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSF 959
+MLME T K+PT+E+F M+LK V + L S++ IVD ++L+R D V KE C++
Sbjct: 918 IMLMEMLTRKRPTDEMFEGEMSLKRLVKESLPDSVIDIVDSNMLNRGDGYSVKKEHCVTS 977
Query: 960 VFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ +A++C ESP +R+ EI+ RL I
Sbjct: 978 IMELALQCVNESPGERMAMVEILARLKNI 1006
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359483685|ref|XP_002263372.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/1036 (47%), Positives = 643/1036 (62%), Gaps = 70/1036 (6%)
Query: 14 ALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRL 73
AL ALK HIT D A NW++ S+CNW G++C+ RV+A+N+S++ L GTI ++
Sbjct: 12 ALIALKAHITYDSQGILATNWSTKSSYCNWYGISCNAPQQRVSAINLSNMGLEGTIAPQV 71
Query: 74 GNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133
GNLS L SL L N F+GSIP I N+ L+ LS +N L+GEIP+N+ S+ L+L
Sbjct: 72 GNLSFLVSLDLTYNDFTGSIPNGIGNLVELQRLSLRNNSLTGEIPSNL-SHCRELRGLSL 130
Query: 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA---- 189
S N F GGIP A+ + + L L L+YN GGIP+EIGNL+ L L L NG+ G
Sbjct: 131 SINQFTGGIPQAIGSLSNLEELYLNYNKLTGGIPREIGNLSNLNILQLGSNGISGPIPAE 190
Query: 190 -YDHGFLQ--IFVKNIFV--------------------------QFSHNFSKCE------ 214
+ LQ IF N Q S C
Sbjct: 191 IFTVSSLQRIIFANNSLSGSLPMDICKHLPNLQGLYLSQNHLSGQLPTTLSLCRELLSLA 250
Query: 215 ---------IPNEIGNLRNLEVLALGLNKLVGVIPAEI----------FNMSTIQGVGLQ 255
IP EIGNL LE + L N L+G IP FN+S +Q +GL
Sbjct: 251 LPMNKFTGSIPREIGNLSKLEEIDLSENSLIGSIPTSFGNLMTLKFLSFNISKLQTLGLV 310
Query: 256 NNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPST 315
N LSGSL S LP+LE LY+ N FSG+IP I N SKL+ L L NSF+G +P
Sbjct: 311 QNHLSGSLPSSIGTWLPDLEGLYIGINEFSGTIPMSISNMSKLTVLSLSDNSFTGNVPKD 370
Query: 316 FGNLRNLKRLGLNNNHLTS--LTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373
NL L+ L L N LT L + FL+SL+NCK+L + + N + G L S+GNL
Sbjct: 371 LCNLTKLQFLDLAYNQLTDEHLASGVGFLTSLTNCKFLRNLWIGYNPLTGTLP-NSLGNL 429
Query: 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDN 433
+L+IF S C G+IP IGNLTNLI LG N+L GSIP TLG+LQKLQ L N
Sbjct: 430 PIALEIFIASACQFRGTIPTGIGNLTNLIWLDLGANDLTGSIPTTLGQLQKLQALSIVGN 489
Query: 434 KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWN 493
++ GSIP+++C L + L LS NKLSGSIP+CFGDL +LR LSL SN L IP +FW+
Sbjct: 490 RIRGSIPNDLCHLKNLGYLRLSYNKLSGSIPSCFGDLPALRELSLDSNVLAFNIPMSFWS 549
Query: 494 LKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYN 553
L+D+L LNLSSN LTG LP E+GN+K + +D S N SG IP+ +G +++L L L N
Sbjct: 550 LRDLLVLNLSSNFLTGNLPPEVGNMKSITTLDLSKNLVSGYIPSRMGKLQNLITLSLSQN 609
Query: 554 ILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSF 613
LQG IP FGDL+SL+SL+LS NNLSG+IP +LE L YLK LN+SFNKL+GEIP GG F
Sbjct: 610 KLQGPIPVEFGDLVSLESLDLSQNNLSGTIPKTLEALIYLKYLNVSFNKLQGEIPNGGPF 669
Query: 614 GNFSAESFEGNKLLCGSPNLHVPPCKTS--IQHTRRKNTILLGIFLPLSTIFMIAVILLI 671
F+AESF N+ LCG+P+ V C + Q + K+ IL I LP+ + + V +++
Sbjct: 670 VKFTAESFMFNEALCGAPHFQVMACDKNNRTQSWKTKSFILKYILLPVGSTVTLVVFIVL 729
Query: 672 ARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGM 731
R+ + P D T + S+ +L AT+ F E+NLIG+G G VYK + +G+
Sbjct: 730 WIRRRDNMEIPTPIDSWLPGTHEKISHQQLLYATNDFGEDNLIGKGSQGMVYKGVLSNGL 789
Query: 732 EVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHG 791
VA+KVFN + A +SF+ ECEVM+ IRHRN+++II+CCS D FKAL L+YMP+G
Sbjct: 790 TVAIKVFNLEFQGALRSFNSECEVMQGIRHRNLVRIITCCSNLD----FKALVLKYMPNG 845
Query: 792 SLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851
SLEK LYS Y LD+ QRLNIMIDVASALEYL+ S+ V+HCDLKPSNVLL D+MVAH+
Sbjct: 846 SLEKLLYSHYYFLDLIQRLNIMIDVASALEYLHHDCSSLVVHCDLKPSNVLLDDDMVAHV 905
Query: 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+DFGI KLLT E + + QT+T +TIGYMA E+GS G VST DVY++G++LME F KKP
Sbjct: 906 ADFGIAKLLT-ETESMQQTKTLSTIGYMAPEHGSAGIVSTKSDVYSYGILLMEVFARKKP 964
Query: 912 TNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVES 971
+E+F +TLK WV L S++++VD +LL RED K C+S + +A+ CT +S
Sbjct: 965 MDEMFTGDLTLKTWVES-LSNSVIQVVDVNLLRREDEDLATKLSCLSSIMALALACTTDS 1023
Query: 972 PEKRINAKEIVTRLLK 987
PE+RI+ K+ V L K
Sbjct: 1024 PEERIDMKDAVVELKK 1039
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359483677|ref|XP_003633000.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/957 (49%), Positives = 628/957 (65%), Gaps = 38/957 (3%)
Query: 37 SISFCNWTG-VTCDVHS-HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIP 94
S+SF +TG + + S + L +SH L+G IP +GNLS+L L L SN SG IP
Sbjct: 298 SLSFNQFTGGIPQAIGSLSNLEELYLSHNKLTGGIPREIGNLSNLNILQLSSNGISGPIP 357
Query: 95 FSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI 154
IFN+ +L++++F DN LSG +P +IC +LP + L+LS+N G +P+ LS C L
Sbjct: 358 AEIFNVSSLQVIAFTDNSLSGSLPKDICKHLPNLQGLSLSQNHLSGQLPTTLSLCGELLF 417
Query: 155 LRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214
L LS+N F G IPKEIGNL+KLE++YL N L G+
Sbjct: 418 LSLSFNKFRGSIPKEIGNLSKLEKIYLGTNSLIGS------------------------- 452
Query: 215 IPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNL 274
IP GNL+ L+ L LG+N L G +P IFN+S +Q + + N LSGSL S L +L
Sbjct: 453 IPTSFGNLKALKFLNLGINNLTGTVPEAIFNISKLQSLAMVKNHLSGSLPSSIGTWLSDL 512
Query: 275 EELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTS 334
E L++ GN FSG IP I N SKL+ L L NSF+G +P GNL LK L L N LT
Sbjct: 513 EGLFIAGNEFSGIIPMSISNMSKLTVLGLSANSFTGNVPKDLGNLTKLKVLDLAGNQLTD 572
Query: 335 --LTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP 392
+ E+ FL+SL+NCK+L+ + + +N G L S+GNL +L+ F S C G+IP
Sbjct: 573 EHVASEVGFLTSLTNCKFLKNLWIGNNPFKGTLPN-SLGNLPIALESFIASACQFRGTIP 631
Query: 393 EEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQL 452
IGNLTNLI LG N+L GSIP TLG+L+KLQ L+ N+L GSIP+++C L + L
Sbjct: 632 TRIGNLTNLIWLDLGANDLTGSIPTTLGRLKKLQKLHIVGNRLRGSIPNDLCHLKNLGYL 691
Query: 453 DLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLP 512
LS+NKLSGSIP+CFGDL +L+ L L SN L IP++ W+L+D+L LNLSSN LTG LP
Sbjct: 692 HLSSNKLSGSIPSCFGDLPALQELFLDSNVLAFNIPTSLWSLRDLLVLNLSSNFLTGNLP 751
Query: 513 LEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSL 572
E+GN+K + +D S N SG IP +G ++L L L N LQG IP FGDL+SL+SL
Sbjct: 752 PEVGNMKSITTLDLSKNLVSGHIPRKMGEQQNLAKLSLSQNKLQGPIPIEFGDLVSLESL 811
Query: 573 NLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPN 632
+LS NNLSG+IP SLE L YLK LN+S NKL+GEIP GG F NF+AESF N+ LCG+P+
Sbjct: 812 DLSQNNLSGTIPKSLEALIYLKYLNVSLNKLQGEIPNGGPFINFTAESFMFNEALCGAPH 871
Query: 633 LHVPPCKTS--IQHTRRKNTILLGIFLPLSTIFMIAVILLIARNRKRGRQQPNDADMPQE 690
V C + Q + K+ IL I LP+ +I + V +++ R+ + P D
Sbjct: 872 FQVMACDKNNRTQSWKTKSFILKYILLPVGSIVTLVVFIVLWIRRRDNMEIPTPIDSWLP 931
Query: 691 ATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFD 750
T + S+ +L AT+ F E+NLIG+G G VYK + +G+ VA+KVFN + A +SFD
Sbjct: 932 GTHEKISHQQLLYATNDFGEDNLIGKGSQGMVYKGVLSNGLTVAIKVFNLEFQGALRSFD 991
Query: 751 VECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL 810
ECEVM+ IRHRN+++II+CCS D FKAL LEYMP+GSLEK+LYS NY LD+ QRL
Sbjct: 992 SECEVMQGIRHRNLVRIITCCSNLD----FKALVLEYMPNGSLEKWLYSHNYFLDLIQRL 1047
Query: 811 NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870
NIMIDVASALEYL+ S+ V+HCDLKP+NVLL D+MVAH++DFGITKLLT+ + + QT
Sbjct: 1048 NIMIDVASALEYLHHDCSSLVVHCDLKPNNVLLDDDMVAHVADFGITKLLTKTES-MQQT 1106
Query: 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930
+T TIGYMA E+GS+G VST DVY++G++LME F+ KKP +E+F +TLK WV + L
Sbjct: 1107 KTLGTIGYMAPEHGSDGIVSTKSDVYSYGILLMEVFSRKKPMDEMFTGDLTLKTWV-ESL 1165
Query: 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
S++++VD +LL RED K C+S + +A+ CT +SPE+R+N K+ V L K
Sbjct: 1166 SNSVIQVVDANLLRREDEDLATKLSCLSSIMALALACTTDSPEERLNMKDAVVELKK 1222
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485453|ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/980 (48%), Positives = 629/980 (64%), Gaps = 68/980 (6%)
Query: 50 VHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQF-------------------- 89
+H + L++S +G IP +G+LS+L++L+L NQ
Sbjct: 259 LHCRELRLLDLSINQFTGFIPQAIGSLSNLETLYLGFNQLAGGIPGEIGNLSNLNLLNSA 318
Query: 90 ----SGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSA 145
SG IP IFNI +L+ + F +N LSG +P +IC +LP + L LS N G +P+
Sbjct: 319 SSGLSGPIPAEIFNISSLQEIGFANNSLSGSLPMDICKHLPNLQWLLLSLNQLSGQLPTT 378
Query: 146 LSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQ 205
LS C L L L+YN+F G IP+EIGNL+KLE++Y + G
Sbjct: 379 LSLCGELLTLTLAYNNFTGSIPREIGNLSKLEQIYFRRSSFTG----------------- 421
Query: 206 FSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQS 265
IP E+GNL NL+ L+L +N L G++P IFN+S +Q + L N LSGSL S
Sbjct: 422 --------NIPKELGNLVNLQFLSLNVNNLTGIVPEAIFNISKLQVLSLAGNHLSGSLPS 473
Query: 266 IPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRL 325
LPNLE+L + GN FSG IP I N S L L++ N F G +P GNLR L+ L
Sbjct: 474 SIGSWLPNLEQLLIGGNEFSGIIPMSISNMSNLISLDISDNFFIGNVPKDLGNLRQLQLL 533
Query: 326 GLNNNHLTS--LTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMS 383
GL++N LT+ EL+FL+SL+NC +L + +S N + G++ S+GNLS SL+I S
Sbjct: 534 GLSHNQLTNEHSASELAFLTSLTNCIFLRTLSISDNPLKGMIP-NSLGNLSISLEIIYAS 592
Query: 384 DCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEV 443
DC + G+IP I NLTNLIG L N+L G IP G+LQKLQ+L N++ GSIP +
Sbjct: 593 DCQLRGTIPTGISNLTNLIGLRLDDNDLTGLIPTPFGRLQKLQMLSISQNRIHGSIPSGL 652
Query: 444 CRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503
C L + LDLS+NKLSG+IP+C G+L LRN+ L SN L S IPS+ NL+ +L LNLS
Sbjct: 653 CHLTNLAFLDLSSNKLSGTIPSCSGNLTGLRNVYLHSNGLASEIPSSLCNLRGLLVLNLS 712
Query: 504 SNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSF 563
SN L LPL++GN+K LV +D S N FSG IP+ I +++L L+L +N LQG IP +F
Sbjct: 713 SNFLNSQLPLQVGNMKSLVALDLSKNQFSGNIPSTISLLQNLLQLYLSHNKLQGHIPPNF 772
Query: 564 GDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEG 623
GDL+SL+SL+LS NNLSG+IP SLE L YL+ LN+SFNKL+GEIP GG F NF+AESF
Sbjct: 773 GDLVSLESLDLSGNNLSGTIPKSLEHLKYLEYLNVSFNKLQGEIPNGGPFANFTAESFIS 832
Query: 624 NKLLCGSPNLHVPPCKTSIQHTRRKNT--ILLGIFLPLSTIF--MIAVILLIARNRKRGR 679
N LCG+P V C + RKNT +LL +PLS +I V+L + R++ +
Sbjct: 833 NLALCGAPRFQVMAC----EKDSRKNTKSLLLKCIVPLSVSLSTIILVVLFVQWKRRQTK 888
Query: 680 QQ-PNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVF 738
+ P D+ R + EL AT+ F E+NLIG+G G VYK + DG+ VAVKVF
Sbjct: 889 SETPIQVDLSLPRMHRMIPHQELLYATNYFGEDNLIGKGSLGMVYKGVLSDGLIVAVKVF 948
Query: 739 NQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLY 798
N + AFKSF+VECEVM++IRHRN+ KIIS CS D FKAL LEYMP+GSLEK+LY
Sbjct: 949 NLELQGAFKSFEVECEVMRNIRHRNLAKIISSCSNLD----FKALVLEYMPNGSLEKWLY 1004
Query: 799 SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858
S NY LD QRL IMIDVAS LEYL+ YS PV+HCDLKPSNVLL D+MVAH+SDFGI K
Sbjct: 1005 SHNYYLDFVQRLKIMIDVASGLEYLHHYYSNPVVHCDLKPSNVLLDDDMVAHISDFGIAK 1064
Query: 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE 918
LL +F+ +T+T T+GYMA EYGSEG VST GD+Y++G++LMETF KKPT+E+F E
Sbjct: 1065 LLMG-SEFMKRTKTLGTVGYMAPEYGSEGIVSTKGDIYSYGILLMETFVRKKPTDEMFVE 1123
Query: 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA 978
+TLK WV +IM+++D +LL+ ED F K C S + +A++CTVE PEKRIN
Sbjct: 1124 ELTLKSWVESS-TNNIMEVIDANLLTEEDESFALKRACFSSIMTLALDCTVEPPEKRINT 1182
Query: 979 KEIVTRLLK-INDLDFNGYP 997
K++V RL K +N +D P
Sbjct: 1183 KDVVVRLKKLLNQIDVLRTP 1202
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255578886|ref|XP_002530297.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223530195|gb|EEF32104.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/1040 (47%), Positives = 652/1040 (62%), Gaps = 89/1040 (8%)
Query: 2 AANTSNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNIS 61
A +NI +D DAL ALK I DP N A NW+ + S C W GVTC RVTAL++S
Sbjct: 25 ADGVTNIASDQDALLALKVRIIRDPNNLLAANWSITTSVCTWVGVTCGARHGRVTALDLS 84
Query: 62 HLSLSGTIPSRLGNLS-------------------------------------------- 77
+ L+GTIP LGNLS
Sbjct: 85 DMGLTGTIPPHLGNLSFLAFISFYNNRFHGSLPDELSKLRRIKAFGMSTNYFSGEIPSWI 144
Query: 78 ----SLQSLFLHSNQFSGSIPFSIFN--IHTLKLLSFGDNQLSGEIPTNICSNLPFFESL 131
LQ L L SN+F+G +P + N I +L LL FG N L+G +P NI ++L +L
Sbjct: 145 GSFTQLQRLSLSSNKFTGLLPAILANNTISSLWLLDFGTNNLTGRLPPNIFTHLANLRAL 204
Query: 132 NLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYD 191
L+ N+F+G IPS L C L++L LS+N F G I K+IGNLT L+ELYL N G
Sbjct: 205 YLNSNLFNGPIPSTLMACQQLKLLALSFNHFEGSIHKDIGNLTMLQELYLGGNNFSGT-- 262
Query: 192 HGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQG 251
IP+EIG+L +LE + L +N L G++P+ I+N S +
Sbjct: 263 -----------------------IPDEIGDLAHLEEIILNVNGLSGLVPSGIYNASKMTA 299
Query: 252 VGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGF 311
+GL N LSG L S LPNLE + N+F+G IP +FNASKL ++L NSF G
Sbjct: 300 IGLALNQLSGYLPS--SSNLPNLEFFIIEDNNFTGPIPVSLFNASKLGNIDLGWNSFYGP 357
Query: 312 IPSTFGNLRNLKRLGLNNNHLT--SLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKS 369
IP GNL++L+ NHLT S + LS SSL+ CK+L DLS+N ++G L S
Sbjct: 358 IPDELGNLKSLEVFSFWVNHLTVKSSSSGLSLFSSLTKCKHLRRFDLSNNPLNGNLP-IS 416
Query: 370 VGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLY 429
VGNLS SL++ ++ DC ++G+IP+EIGNL++L LG N+L G+IP T+ KL KLQ L
Sbjct: 417 VGNLSSSLEVVEIFDCGITGTIPKEIGNLSSLSWLDLGANDLRGTIPTTIRKLGKLQELK 476
Query: 430 FPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS 489
N+LEGS P E+C L + L L N LSG IP+C G++ SLR LS+ N+ S IPS
Sbjct: 477 LHYNRLEGSFPYELCDLQSLAYLYLEVNALSGQIPSCLGNVNSLRTLSMGMNKFSSTIPS 536
Query: 490 TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLF 549
T W L DIL LNLSSNSL+G L ++IGNLK + ID S N SG IP++IGG+K L L
Sbjct: 537 TLWRLADILELNLSSNSLSGSLAVDIGNLKAVTLIDLSGNQLSGHIPSSIGGLKTLLNLS 596
Query: 550 LEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609
L N L+GSIP FGD +SL+ L+LSNNNLSG IP SLE+L YL N+SFN+L+GEIP
Sbjct: 597 LAVNRLEGSIPQLFGDAISLQLLDLSNNNLSGEIPKSLEELRYLTYFNVSFNELQGEIPN 656
Query: 610 GGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQHTRR---KNTILLGIFLPLSTIFMIA 666
G +F N SA+SF GNK LCG+ L V PC+TS + K + G+ TI +A
Sbjct: 657 GRAFINLSAKSFMGNKGLCGAAKLQVQPCETSTHQGSKAASKLALRYGLMATGLTILAVA 716
Query: 667 VILLI-ARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKA 725
+ +I R+RKR + + +P AT +R SY EL QATD F+E NL+GRG FGSVYK
Sbjct: 717 AVAIIFIRSRKR-NMRITEGLLPL-ATLKRISYRELEQATDKFNEMNLLGRGSFGSVYKG 774
Query: 726 RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785
DG VAVKVFN Q AFKSFDVECEV++ IRHRN++KII+ CS D FKAL L
Sbjct: 775 TFSDGSSVAVKVFNLQVEGAFKSFDVECEVLRMIRHRNLVKIITSCS--DINIDFKALVL 832
Query: 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845
E+MP+ SLEK+L S + L++ +RLNIM+DVASA+EYL+ GY+ P++HCDLKPSN+LL +
Sbjct: 833 EFMPNYSLEKWLCSPKHFLELLERLNIMLDVASAVEYLHHGYAMPIVHCDLKPSNILLDE 892
Query: 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMET 905
NMVAH++DFGI KLL E F+ QT T AT+GYMA EYGSEG VST GD+Y+FG++LMET
Sbjct: 893 NMVAHVTDFGIAKLLGDEHSFI-QTITLATVGYMAPEYGSEGVVSTGGDIYSFGILLMET 951
Query: 906 FTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAM 965
FT KKPT+++FNE +++K WV + + + +I D LL E+ F AK+ C+ V +A+
Sbjct: 952 FTRKKPTDDMFNEEISMKQWVQESVPGGVTQITDPDLLRIEEQHFSAKKDCILSVMQVAL 1011
Query: 966 ECTVESPEKRINAKEIVTRL 985
+C+ + PE+R N ++++ L
Sbjct: 1012 QCSADLPEERPNIRDVLNTL 1031
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359497186|ref|XP_003635448.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/945 (49%), Positives = 621/945 (65%), Gaps = 43/945 (4%)
Query: 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQF------SGSIPFS-IFNIHTLKLL 106
++ +++++ +G+IPS + NL LQ L L +N F S ++ F+ IFN+ +L+++
Sbjct: 221 QLQVISLAYNDFTGSIPSGIDNLVELQRLSLQNNSFTAFKDISKALLFAEIFNVSSLQVI 280
Query: 107 SFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGI 166
+F DN LSG +P +IC +LP + L+LS+N G +P+ LS C L L LS+N F G I
Sbjct: 281 AFTDNSLSGSLPKDICKHLPNLQGLSLSQNHLSGQLPTTLSLCGELLFLSLSFNKFRGSI 340
Query: 167 PKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLE 226
PKEIGNL+KLEE+YL N L G+ IP GNL+ L+
Sbjct: 341 PKEIGNLSKLEEIYLGTNSLIGS-------------------------IPTSFGNLKALK 375
Query: 227 VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG 286
L LG+N L G +P IFN+S +Q + + N LSGSL S LP+LE L++ GN FSG
Sbjct: 376 FLNLGINNLTGTVPEAIFNISKLQSLAMVKNHLSGSLPSSIGTWLPDLEGLFIAGNEFSG 435
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTS--LTLELSFLSS 344
IP I N SKL+ L L NSF+G +P GNL LK L L N LT + E+ FL+S
Sbjct: 436 IIPMSISNMSKLTVLGLSANSFTGNVPKDLGNLTKLKVLDLAGNQLTDEHVASEVGFLTS 495
Query: 345 LSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGF 404
L+NCK+L+ + + + G L S+GNL +L+ F S C G+IP IGNLTNLI
Sbjct: 496 LTNCKFLKNLWIGNIPFKGTLPN-SLGNLPIALESFIASACQFRGTIPTGIGNLTNLIRL 554
Query: 405 YLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIP 464
LG N+L GSIP TLG+LQKLQ LY N++ GSIP+++C L + L LS+NKLSGSIP
Sbjct: 555 DLGANDLTGSIPTTLGQLQKLQWLYIAGNRIRGSIPNDLCHLKDLGYLFLSSNKLSGSIP 614
Query: 465 ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKI 524
+CFGDL +L+ L L SN L IP++ W+L+D+L LNLSSN LTG LP E+GN+K + +
Sbjct: 615 SCFGDLLALQELFLDSNVLAFNIPTSLWSLRDLLALNLSSNFLTGNLPPEVGNMKSITTL 674
Query: 525 DFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIP 584
D S N SG IP+ +G ++ L L L N LQG IP FGDL+SL+SL+LS NNLSG+IP
Sbjct: 675 DLSKNLVSGYIPSKMGKLQSLITLSLSQNRLQGPIPIEFGDLVSLESLDLSQNNLSGTIP 734
Query: 585 VSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTS--I 642
SLE L YLK LN+S NKL+GEIP GG F NF+AESF N+ LCG+P+ V C +
Sbjct: 735 KSLEALIYLKYLNVSLNKLQGEIPNGGPFINFTAESFMFNEALCGAPHFQVMACDKNNRT 794
Query: 643 QHTRRKNTILLGIFLPLSTIFMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLELC 702
Q + K+ IL I LP+ +I + V +++ R+ + P D T + S+ +L
Sbjct: 795 QSWKTKSFILKYILLPVGSIVTLVVFIVLWIRRRDNMEIPTPIDSWLPGTHEKISHQQLL 854
Query: 703 QATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHR 762
AT+ F E+NLIG+G G VYK + +G+ VA+KVFN + A +SFD ECEVM+ IRHR
Sbjct: 855 YATNDFGEDNLIGKGSQGMVYKGVLSNGLTVAIKVFNLEFQGALRSFDSECEVMQGIRHR 914
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
N+++II+CCS D FKAL LEYMP+GSLEK+LYS NY LD+ QRLNIMIDVASALEY
Sbjct: 915 NLVRIITCCSNLD----FKALVLEYMPNGSLEKWLYSHNYFLDLIQRLNIMIDVASALEY 970
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
L+ S+ V+HCDLKP+NVLL D+MVAH++DFGITKLLT+ + + QT+T TIGYMA E
Sbjct: 971 LHHDCSSLVVHCDLKPNNVLLDDDMVAHVADFGITKLLTKTES-MQQTKTLGTIGYMAPE 1029
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942
+GS+G VST DVY++G++LME F+ KKP +E+F G+TLK WV L S++++VD +L
Sbjct: 1030 HGSDGIVSTKSDVYSYGILLMEVFSRKKPMDEMFTGGLTLKTWVES-LSNSVIQVVDANL 1088
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
L RED K C+S + +A+ CT SPEKR+N K+ V L K
Sbjct: 1089 LRREDEDLATKLSCLSSIMALALACTTNSPEKRLNMKDAVVELKK 1133
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359483683|ref|XP_003633001.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/929 (50%), Positives = 614/929 (66%), Gaps = 38/929 (4%)
Query: 65 LSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSN 124
L+G IP +GNLS+L L L S+ +G IP IFNI +L + F +N LSG +P +IC +
Sbjct: 327 LTGGIPREIGNLSNLNILHLASSGINGPIPAEIFNISSLHRIDFTNNSLSGGLPMDICKH 386
Query: 125 LPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFN 184
LP + L LS+N G +P+ L C L +L LS N F G IP++IGNL+KLE++YLS N
Sbjct: 387 LPNLQGLYLSQNHLSGQLPTTLFLCGELLLLSLSINKFTGSIPRDIGNLSKLEKIYLSTN 446
Query: 185 GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF 244
L G+ IP GNL+ L+ L LG N L G IP +IF
Sbjct: 447 SLIGS-------------------------IPTSFGNLKALKFLQLGSNNLTGTIPEDIF 481
Query: 245 NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQ 304
N+S +Q + L N LSG L S LP+LE L++ GN FSG+IP I N SKL RL +
Sbjct: 482 NISKLQTLALAQNHLSGGLPSSIGTWLPDLEGLFIGGNEFSGTIPVSISNMSKLIRLHIS 541
Query: 305 KNSFSGFIPSTFGNLRNLKRLGLNNNHLTS--LTLELSFLSSLSNCKYLEFIDLSSNSID 362
N F+G +P NLR L+ L L N LT LT E+ FL+SL+NCK+L + + N +
Sbjct: 542 DNYFTGNVPKDLSNLRKLEVLNLAGNQLTDEHLTSEVGFLTSLTNCKFLRTLWIDYNPLK 601
Query: 363 GILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKL 422
G L S+GNLS +L+ F S C+ G+IP IGNLTNLI LG N+L GSIP TLG L
Sbjct: 602 GTLPN-SLGNLSVALESFTASACHFRGTIPTGIGNLTNLIWLDLGANDLTGSIPTTLGHL 660
Query: 423 QKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNE 482
QKLQ LY N+++GSIP+++C L + L LS+NKLSGSIP+CFGDL +LR LSL SN
Sbjct: 661 QKLQRLYIAGNRIQGSIPNDLCHLKNLGYLHLSSNKLSGSIPSCFGDLPALRELSLDSNV 720
Query: 483 LISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGI 542
L IP +FW+L+D++ L+LSSN LTG LP E+GN+K + +D S N SG IP +G +
Sbjct: 721 LAFNIPMSFWSLRDLMVLSLSSNFLTGNLPPEVGNMKSITTLDLSKNLISGYIPRRMGEL 780
Query: 543 KDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNK 602
++L L L N LQGSIP FGDL+SL+S++LS NNL G+IP SLE L YLK LN+SFNK
Sbjct: 781 QNLVNLCLSQNKLQGSIPVEFGDLLSLESMDLSQNNLFGTIPKSLEALIYLKHLNVSFNK 840
Query: 603 LEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTS--IQHTRRKNTILLGIFLPL- 659
L+GEIP GG F NF+AESF N+ LCG+P+ V C + Q + K+ IL I LP+
Sbjct: 841 LQGEIPNGGPFVNFTAESFIFNEALCGAPHFQVIACDKNNRTQSWKTKSFILKYILLPVG 900
Query: 660 STIFMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGF 719
S + ++A I+L R R+ + P D + S +L AT+GF E+NLIG+G
Sbjct: 901 SAVTLVAFIVLWIR-RRDNTEIPAPIDSWLPGAHEKISQQQLLYATNGFGEDNLIGKGSL 959
Query: 720 GSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779
G VYK + +G+ VA+KVFN + A +SFD ECEVM+ I HRN+I+II+CCS D
Sbjct: 960 GMVYKGVLSNGLTVAIKVFNLEFQGALRSFDSECEVMQGICHRNLIRIITCCSNLD---- 1015
Query: 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839
FKAL LEYMP GSL+K+LYS NY LD+FQRLNIMIDVASALEYL+ S+ V+HCDLKPS
Sbjct: 1016 FKALVLEYMPKGSLDKWLYSHNYFLDLFQRLNIMIDVASALEYLHHDCSSLVVHCDLKPS 1075
Query: 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFG 899
NVLL +NMVAH++DFGI +LLT E + + QT+T TIGYMA EYGS+G VST GDVY++G
Sbjct: 1076 NVLLDNNMVAHVADFGIARLLT-ETESMQQTKTLGTIGYMAPEYGSDGIVSTKGDVYSYG 1134
Query: 900 VMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSF 959
++LME F KKP +E+F +TLK WV + L S++++VD +LL R+D K +S
Sbjct: 1135 ILLMEVFARKKPMDEMFTGDVTLKTWV-ESLSSSVIEVVDANLLRRDDEDLATKLSYLSS 1193
Query: 960 VFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ +A+ CT +SPE+RIN K++V L KI
Sbjct: 1194 LMALALACTADSPEERINMKDVVVELKKI 1222
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255572272|ref|XP_002527075.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223533580|gb|EEF35319.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/923 (50%), Positives = 606/923 (65%), Gaps = 41/923 (4%)
Query: 74 GNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133
GNLS+LQ L + NQ SGS P I ++ +LK + N LSG + +C+ + LNL
Sbjct: 188 GNLSNLQVLNMGLNQLSGSFPPKILDLPSLKFIYLQVNNLSGNLKEILCNQNSKLQLLNL 247
Query: 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHG 193
+ N +G IPS L C LR L L N F G IP+ IGNLTKL+ L L N L G
Sbjct: 248 AGNQLYGQIPSDLYKCKELRSLALHANKFTGSIPRTIGNLTKLKWLSLGRNNLTG----- 302
Query: 194 FLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVG 253
IP EIGNL+NL+++ L N L G IP +FN+ST++ +
Sbjct: 303 --------------------RIPLEIGNLQNLQIVHLSFNNLNGSIPHALFNISTMKWIA 342
Query: 254 LQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIP 313
+ +N+L G+L + + LPNL LYL N SG IP++I NASKL+ LEL NSF+GFIP
Sbjct: 343 MTSNNLLGNLPTSLGLHLPNLIWLYLGINKLSGPIPSYISNASKLTILELPSNSFTGFIP 402
Query: 314 STFGNLRNLKRLGLNNNHLTS--LTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371
+ G+LRNL+ L L N L+S + EL+ SSL NC+ L+++ LS N +DG L SVG
Sbjct: 403 DSLGDLRNLQTLKLGANLLSSKKTSQELTIFSSLKNCQNLKYLWLSYNPLDGYLPH-SVG 461
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431
NLS+SL+ F SD + GS+ E IGNL++L LG N+L G IP T+G L+ LQ LY
Sbjct: 462 NLSNSLESFLASDGLIKGSVHESIGNLSSLTRLNLGNNDLTGRIPTTIGTLKHLQGLYLH 521
Query: 432 DNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTF 491
N L+GSIP E+C L +Y L+L+ NKLSGSIP CF +L SLRNL LASN +S I ST
Sbjct: 522 GNDLDGSIPSELCDLRTLYNLELTGNKLSGSIPTCFSNLTSLRNLFLASNRFVSTISSTL 581
Query: 492 WNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLE 551
W LKDIL +NL+SN LTG LP EI NL+ + I+ S N SG IP +IGG++DL L+L
Sbjct: 582 WTLKDILQVNLASNYLTGSLPSEIENLRAVYMINISKNQLSGEIPISIGGLQDLAQLYLS 641
Query: 552 YNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGG 611
N LQG IP S GD+ SL+ L+LS+NNLSG IP SL+ L YLK N+SFN L+GEIP+GG
Sbjct: 642 GNKLQGPIPQSVGDIKSLEFLDLSSNNLSGMIPKSLDNLLYLKYFNVSFNYLQGEIPEGG 701
Query: 612 SFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQHTRRKNT----ILLGIFLP--LSTIFMI 665
SF NFSA+SF GN+ LCGS L V PCK ++R T I+L LP + +F++
Sbjct: 702 SFSNFSAQSFIGNEALCGSARLQVSPCKD--DNSRATETPGSKIVLRYVLPAIVFAVFVL 759
Query: 666 AVILLIARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKA 725
A ++++ R +R + + D T RR SY EL AT+GF E+N +G G FGSVYK
Sbjct: 760 AFVIMLKRYCERKAKFSIEDDFLALTTIRRISYHELQLATNGFQESNFLGMGSFGSVYKG 819
Query: 726 RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785
+ DG +A KVFN Q RAFKSFD ECEV++++RHRN++KII+ CS + FKAL L
Sbjct: 820 TLSDGTVIAAKVFNLQLERAFKSFDTECEVLRNLRHRNLVKIITSCSGPN----FKALVL 875
Query: 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845
E+MP+ SLEK+LYS +Y L+ QRLNIM+DVAS LEYL+ GY+ P+ HCD+KPSNVLL +
Sbjct: 876 EFMPNWSLEKWLYSDDYFLNNLQRLNIMLDVASVLEYLHHGYTIPMAHCDIKPSNVLLNE 935
Query: 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMET 905
+MVA L+DFGI+KLL E V QT T ATIGYMA EYGSEG VS GDVY++GV+LMET
Sbjct: 936 DMVAFLADFGISKLLGEEGS-VMQTMTLATIGYMAPEYGSEGIVSVRGDVYSYGVLLMET 994
Query: 906 FTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAM 965
FT KKPT+++F E ++LK WV L + +++D +LL E+ AK+ C+ + +A+
Sbjct: 995 FTQKKPTDKMFTEQLSLKSWVEQSLSCEVTQVIDANLLGIEEDHLAAKKDCIVSILKLAL 1054
Query: 966 ECTVESPEKRINAKEIVTRLLKI 988
+C+ + P RI+ K +VT L KI
Sbjct: 1055 QCSADLPHDRIDMKHVVTTLQKI 1077
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147776333|emb|CAN72034.1| hypothetical protein VITISV_000078 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/927 (49%), Positives = 603/927 (65%), Gaps = 36/927 (3%)
Query: 65 LSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSN 124
L+G IP +GNLS+L L L SN SG IP IFNI +L+++ F +N LSG +P IC +
Sbjct: 304 LTGGIPREIGNLSNLNILQLGSNGISGPIPAEIFNISSLQVIDFTNNSLSGSLPMGICKH 363
Query: 125 LPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFN 184
LP + L L++N G +P+ LS C L L LS+N F G IP+EIGNL+KLE + L N
Sbjct: 364 LPNLQGLYLAQNHLSGQLPTTLSLCGELLFLSLSFNKFRGSIPREIGNLSKLEHIDLRSN 423
Query: 185 GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF 244
L G+ IP GNL+ L+ L LG+N L G +P IF
Sbjct: 424 SLVGS-------------------------IPTSFGNLKALKFLNLGINFLTGTVPEAIF 458
Query: 245 NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQ 304
N+S +Q + L N LSGSL S LP+LE LY+ N FSG+IP I N SKL+ L L
Sbjct: 459 NISELQNLALVQNHLSGSLPSSIGTWLPDLEGLYIGANEFSGTIPMSISNMSKLTVLSLS 518
Query: 305 KNSFSGFIPSTFGNLRNLKRLGLNNNHLTS--LTLELSFLSSLSNCKYLEFIDLSSNSID 362
NSF+G +P NL LK L L +N LT L + FL+SL+NCK+L ++ + N +
Sbjct: 519 DNSFTGNVPKDLCNLTKLKFLNLAHNQLTDEHLASGVGFLTSLTNCKFLRYLWIGYNPLK 578
Query: 363 GILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKL 422
G L S+GNL +L+ F C G+IP IGNLTNLI LG N+L GSIP TLG+L
Sbjct: 579 GTLP-NSLGNLPIALESFTAYACQFRGTIPTGIGNLTNLIWLDLGANDLTGSIPTTLGRL 637
Query: 423 QKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNE 482
QKLQ L+ N++ GSIP+++C L + L LS+NKLSGS P+CFGDL +LR L L SN
Sbjct: 638 QKLQRLHIAGNRIRGSIPNDLCHLKNLGYLGLSSNKLSGSTPSCFGDLLALRELFLDSNA 697
Query: 483 LISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGI 542
L IP++ W+L+D+L LNLSSN LTG LP E+GN+K + +D S N SG IP+ +G +
Sbjct: 698 LAFNIPTSLWSLRDLLVLNLSSNFLTGNLPPEVGNMKSITTLDLSKNLVSGYIPSRMGKL 757
Query: 543 KDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNK 602
+ L L L N LQG I FGDL+SL+SL+LS+NNLSG+IP SLE L YLK LN+SFNK
Sbjct: 758 QYLITLSLSQNRLQGPIXVEFGDLVSLESLDLSHNNLSGTIPKSLEALIYLKYLNVSFNK 817
Query: 603 LEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTS--IQHTRRKNTILLGIFLPLS 660
L+GEIP GG F F+AESF N+ LCG+P+ V C + Q + K+ IL I LP+
Sbjct: 818 LQGEIPNGGPFVKFTAESFMFNEALCGAPHFQVMACDKNNRTQSWKTKSFILKYILLPVG 877
Query: 661 TIFMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFG 720
+ + V +++ R+ + P D T + S+ +L AT+ F E+NLIG+G G
Sbjct: 878 STVTLVVFIVLWIRRRDNMEIPTPIDSWLLGTHEKISHQQLLYATNDFGEDNLIGKGSQG 937
Query: 721 SVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780
VYK + +G+ VA+KVFN + A +SFD ECEVM+ IRHRN+++II+CCS D F
Sbjct: 938 MVYKGVLSNGLNVAIKVFNLEFQGALRSFDSECEVMQGIRHRNLVRIITCCSNLD----F 993
Query: 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840
KAL LEYMP+GSLEK+LYS NY LD+ QRLNIMIDVASALEYL+ S+ V+HCDLKPSN
Sbjct: 994 KALVLEYMPNGSLEKWLYSHNYFLDLIQRLNIMIDVASALEYLHHDCSSLVVHCDLKPSN 1053
Query: 841 VLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGV 900
VLL D+MVAH++DFGI KLLT E + + QT+T TIGYMA E+GS G VST DVY++G+
Sbjct: 1054 VLLDDDMVAHVADFGIAKLLT-ETESMQQTKTLGTIGYMAPEHGSAGIVSTKSDVYSYGI 1112
Query: 901 MLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFV 960
+LME F KKP +E+F +TLK WV + L S++++VD +LL RED K C+S +
Sbjct: 1113 LLMEVFARKKPMDEMFTGDLTLKTWV-ESLSNSVIQVVDVNLLRREDEDLATKLSCLSSI 1171
Query: 961 FNMAMECTVESPEKRINAKEIVTRLLK 987
+A+ CT +SP++RI+ K+ V L K
Sbjct: 1172 MALALACTTDSPKERIDMKDAVVELKK 1198
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1002 | ||||||
| UNIPROTKB|Q40640 | 1025 | Xa21 "Receptor kinase-like pro | 0.854 | 0.835 | 0.355 | 2.6e-134 | |
| TAIR|locus:2079142 | 1010 | AT3G47570 [Arabidopsis thalian | 0.950 | 0.942 | 0.328 | 1.3e-121 | |
| TAIR|locus:2075661 | 1025 | AT3G47110 [Arabidopsis thalian | 0.697 | 0.681 | 0.337 | 1.6e-93 | |
| TAIR|locus:2075631 | 1009 | AT3G47090 [Arabidopsis thalian | 0.772 | 0.767 | 0.344 | 9.4e-114 | |
| TAIR|locus:2079157 | 1011 | AT3G47580 [Arabidopsis thalian | 0.953 | 0.944 | 0.312 | 1.5e-113 | |
| TAIR|locus:2170483 | 1173 | FLS2 "FLAGELLIN-SENSITIVE 2" [ | 0.913 | 0.780 | 0.318 | 6.6e-113 | |
| TAIR|locus:2156349 | 1252 | GSO2 "GASSHO 2" [Arabidopsis t | 0.727 | 0.582 | 0.295 | 6.3e-109 | |
| TAIR|locus:2120362 | 1249 | GSO1 "GASSHO1" [Arabidopsis th | 0.546 | 0.438 | 0.339 | 1.5e-107 | |
| TAIR|locus:2047525 | 980 | AT2G24130 [Arabidopsis thalian | 0.794 | 0.812 | 0.326 | 4.4e-100 | |
| TAIR|locus:2097310 | 1002 | BAM2 "BARELY ANY MERISTEM 2" [ | 0.912 | 0.912 | 0.311 | 3.9e-99 |
| UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)] | Back alignment and assigned GO terms |
|---|
Score = 1316 (468.3 bits), Expect = 2.6e-134, P = 2.6e-134
Identities = 312/877 (35%), Positives = 464/877 (52%)
Query: 82 LFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGG 141
L L S+ SG I S+ N+ L+ L GDN LSGEIP + S L + L LS N G
Sbjct: 84 LLLRSSNLSGIISPSLGNLSFLRELDLGDNYLSGEIPPEL-SRLSRLQLLELSDNSIQGS 142
Query: 142 IPSALSNCTYLRILRLSYNDFAGGIPKEIG-NLTKLEELYLSFNGLQGAYDHGFLQIFVK 200
IP+A+ CT L L LS+N G IP+EIG +L L LYL NGL G +
Sbjct: 143 IPAAIGACTKLTSLDLSHNQLRGMIPREIGASLKHLSNLYLYKNGLSGEIPSALGNLTSL 202
Query: 201 NIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVXXXXXXXX 260
F S N IP+ +G L +L + LG N L G+IP I+N+S+++
Sbjct: 203 QEF-DLSFNRLSGAIPSSLGQLSSLLTMNLGQNNLSGMIPNSIWNLSSLRAFSVRENKLG 261
Query: 261 XXXXXIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFXXXX 320
+ L LE + + N F G IP + NAS L+ +++ N FSG I S F
Sbjct: 262 GMIPTNAFKTLHLLEVIDMGTNRFHGKIPASVANASHLTVIQIYGNLFSGIITSGFGRLR 321
Query: 321 XXXXXXXXXXXXXXXXXXX-XXXXXXXNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKI 379
NC L+ ++L N++ G+L S NLS SL
Sbjct: 322 NLTELYLWRNLFQTREQDDWGFISDLTNCSKLQTLNLGENNLGGVLPN-SFSNLSTSLSF 380
Query: 380 FDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSI 439
+ ++GSIP++IGNL L YL NN GS+P +LG+L+ L +L +N L GSI
Sbjct: 381 LALELNKITGSIPKDIGNLIGLQHLYLCNNNFRGSLPSSLGRLKNLGILLAYENNLSGSI 440
Query: 440 PDEVCRLAKVYQLDLSNNKLSGSIPACFGDXXXXXXXXXXXXXXISVIPSTFWNLKDI-L 498
P + L ++ L L NK SG IP + IPS +N++ + +
Sbjct: 441 PLAIGNLTELNILLLGTNKFSGWIPYTLSNLTNLLSLGLSTNNLSGPIPSELFNIQTLSI 500
Query: 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGS 558
+N+S N+L G +P EIG+LK LV+ N SG IPN +G + L++L+L+ N+L GS
Sbjct: 501 MINVSKNNLEGSIPQEIGHLKNLVEFHAESNRLSGKIPNTLGDCQLLRYLYLQNNLLSGS 560
Query: 559 IPDSFGDLMXXXXXXXXXXXXXGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSA 618
IP + G L G IP SL ++ L LNLSFN GE+P G+F S
Sbjct: 561 IPSALGQLKGLETLDLSSNNLSGQIPTSLADITMLHSLNLSFNSFVGEVPTIGAFAAASG 620
Query: 619 ESFEGNKLLCGS-PNLHVPPCKTSIQHTRRKNTILLGIFLPLSTIFMIAVILLIARNRKR 677
S +GN LCG P+LH+P C +++ + + + + L + + ++ LLI +++
Sbjct: 621 ISIQGNAKLCGGIPDLHLPRCCPLLENRKHFPVLPISVSLAAALAILSSLYLLITWHKRT 680
Query: 678 GRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKV 737
+ P+ M SY +L +ATDGF+ NL+G G FGSVYK ++ VAVKV
Sbjct: 681 KKGAPSRTSMKGHPL---VSYSQLVKATDGFAPTNLLGSGSFGSVYKGKLNIQDHVAVKV 737
Query: 738 FNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL-FKALALEYMPHGSLEKY 796
+ +A KSF ECE ++++RHRN++KI++ CS D + FKA+ ++MP+GSLE +
Sbjct: 738 LKLENPKALKSFTAECEALRNMRHRNLVKIVTICSSIDNRGNDFKAIVYDFMPNGSLEDW 797
Query: 797 LY------SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH 850
++ + L++ +R+ I++DVA AL+YL+ PV+HCD+K SNVLL +MVAH
Sbjct: 798 IHPETNDQADQRHLNLHRRVTILLDVACALDYLHRHGPEPVVHCDIKSSNVLLDSDMVAH 857
Query: 851 LSDFGITKLLTREDQFVTQTQTP----ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETF 906
+ DFG+ ++L + Q+ + TIGY A EYG ST+GD+Y++G++++E
Sbjct: 858 VGDFGLARILVDGTSLIQQSTSSMGFIGTIGYAAPEYGVGLIASTHGDIYSYGILVLEIV 917
Query: 907 TGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
TGK+PT+ F + L+ +V L + +VD L+
Sbjct: 918 TGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTKLI 954
|
|
| TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
Identities = 332/1011 (32%), Positives = 485/1011 (47%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTI 69
TD AL K+ ++ D +WN S CNW GVTC + RVT L + L L G I
Sbjct: 24 TDRQALLQFKSQVSEDK-RVVLSSWNHSFPLCNWKGVTCGRKNKRVTHLELGRLQLGGVI 82
Query: 70 PSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNI--CSNLPF 127
+GNLS L SL L+ N F G+IP + + L+ L G N L G IP + CS L
Sbjct: 83 SPSIGNLSFLVSLDLYENFFGGTIPQEVGQLSRLEYLDMGINYLRGPIPLGLYNCSRLL- 141
Query: 128 FESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187
+L L N G +PS L + T L L L N+ G +P +GNLT LE+L LS N L+
Sbjct: 142 --NLRLDSNRLGGSVPSELGSLTNLVQLNLYGNNMRGKLPTSLGNLTLLEQLALSHNNLE 199
Query: 188 GAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMS 247
G Q+ ++NFS P + NL +L++L +G N G + ++ +
Sbjct: 200 GEIPSDVAQLTQIWSLQLVANNFSGV-FPPALYNLSSLKLLGIGYNHFSGRLRPDLGIL- 257
Query: 248 TIQGVXXXXXXXXXXXXXIPYV--RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQK 305
+ + IP + LE L + N+ +GSIP F N L L L
Sbjct: 258 -LPNLLSFNMGGNYFTGSIPTTLSNISTLERLGMNENNLTGSIPTF-GNVPNLKLLFLHT 315
Query: 306 NSFSGFIPST--FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCKYLEFIDLSSNSIDG 363
NS F L +DL I G
Sbjct: 316 NSLGSDSSRDLEFLTSLTNCTQLETLGIGRNRLGGDLPISIANLSAKLVTLDLGGTLISG 375
Query: 364 ILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQ 423
+ +GNL + K+ + +SG +P +G L NL L N L+G IP +G +
Sbjct: 376 SIPY-DIGNLINLQKLI-LDQNMLSGPLPTSLGKLLNLRYLSLFSNRLSGGIPAFIGNMT 433
Query: 424 KLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDXXXXXXXXXXXXXX 483
L+ L +N EG +P + + + +L + +NKL+G+IP
Sbjct: 434 MLETLDLSNNGFEGIVPTSLGNCSHLLELWIGDNKLNGTIPLEIMKIQQLLRLDMSGNSL 493
Query: 484 ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIG--G 541
I +P L+++ L+L N L+G LP +GN + + N F G IP+ G G
Sbjct: 494 IGSLPQDIGALQNLGTLSLGDNKLSGKLPQTLGNCLTMESLFLEGNLFYGDIPDLKGLVG 553
Query: 542 IKDLQFLFLEYNILQGSIPDSFGDLMXXXXXXXXXXXXXGSIPVSLEKLSYLKDLNLSFN 601
+K++ L N L GSIP+ F G +PV K + +S
Sbjct: 554 VKEVD---LSNNDLSGSIPEYFASFSKLEYLNLSFNNLEGKVPV---KGIFENATTVSI- 606
Query: 602 KLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQHTRRKNTILLGIFLPLST 661
+ GG G F+ L +P++ K +H+ R +++G+ + ++
Sbjct: 607 -VGNNDLCGGIMG------FQLKPCLSQAPSV----VK---KHSSRLKKVVIGVSVGITL 652
Query: 662 I---FMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGG 718
+ FM +V L+ R RK+ ++ N E + SY +L AT+GFS +N++G G
Sbjct: 653 LLLLFMASVTLIWLRKRKKNKETNNPTPSTLEVLHEKISYGDLRNATNGFSSSNMVGSGS 712
Query: 719 FGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777
FG+VYKA + + VAVKV N Q A KSF ECE +K IRHRN++K+++ CS DF+
Sbjct: 713 FGTVYKALLLTEKKVVAVKVLNMQRRGAMKSFMAECESLKDIRHRNLVKLLTACSSIDFQ 772
Query: 778 AL-FKALALEYMPHGSLEKYLYSSNY--------ILDIFQRLNIMIDVASALEYLYFGYS 828
F+AL E+MP+GSL+ +L+ L + +RLNI IDVAS L+YL+
Sbjct: 773 GNEFRALIYEFMPNGSLDMWLHPEEVEEIHRPSRTLTLLERLNIAIDVASVLDYLHVHCH 832
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR--EDQFVTQTQTPA---TIGYMALEY 883
P+ HCDLKPSNVLL D++ AH+SDFG+ +LL + E+ F Q + TIGY A EY
Sbjct: 833 EPIAHCDLKPSNVLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEY 892
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
G G+ S NGDVY+FG++L+E FTGK+PTNE+F TL + L I+ IVD S+L
Sbjct: 893 GVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESIL 952
Query: 944 SRE-DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993
+ F E C++ VF + + C ESP R+ +V L+ I + F
Sbjct: 953 HIGLRVGFPVVE-CLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERFF 1002
|
|
| TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 243/719 (33%), Positives = 353/719 (49%)
Query: 94 PFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLR 153
PF + N+ L+ L+ DN G IP+ + NL + LN+S N+F G IP LSNC+ L
Sbjct: 99 PF-VGNLSFLRSLNLADNFFHGAIPSEV-GNLFRLQYLNMSNNLFGGVIPVVLSNCSSLS 156
Query: 154 ILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKC 213
L LS N G+P E G+L+KL L L N L G + + + + F +N +
Sbjct: 157 TLDLSSNHLEQGVPLEFGSLSKLVLLSLGRNNLTGKFPASLGNLTSLQM-LDFIYNQIEG 215
Query: 214 EIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVXXXXXXXXXXXXXIPYVRLPN 273
EIP +I L+ + + LNK GV P I+N+S++ + LPN
Sbjct: 216 EIPGDIARLKQMIFFRIALNKFNGVFPPPIYNLSSLIFLSITGNSFSGTLRPDFGSLLPN 275
Query: 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFXXXXXXXXXXXXXXXXX 333
L+ LY+ N F+G+IP + N S L +L++ N +G IP +F
Sbjct: 276 LQILYMGINSFTGTIPETLSNISSLRQLDIPSNHLTGKIPLSFGRLQNLLLLGLNNNSLG 335
Query: 334 XXXXXXXXXXXX-XNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP 392
NC L+++++ N + G L + NLS L + +SGSIP
Sbjct: 336 NYSSGDLDFLGALTNCSQLQYLNVGFNKLGGQLP-VFIANLSTQLTELSLGGNLISGSIP 394
Query: 393 EEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQL 452
IGNL +L LG N L G +P +LG+L +L+ + N L G IP + ++ + L
Sbjct: 395 HGIGNLVSLQTLDLGENLLTGKLPPSLGELSELRKVLLYSNGLSGEIPSSLGNISGLTYL 454
Query: 453 DLSNNKLSGSIPACFGDXXXXXXXXXXXXXXISVIPSTFWNLKDILYLNLSSNSLTGPLP 512
L NN GSIP+ G IP L ++ LN+S N L GPL
Sbjct: 455 YLLNNSFEGSIPSSLGSCSYLLDLNLGTNKLNGSIPHELMELPSLVVLNVSFNLLVGPLR 514
Query: 513 LEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMXXXXX 572
+IG LK L+ +D S N SG IP + L+FL L+ N G IPD G L
Sbjct: 515 QDIGKLKFLLALDVSYNKLSGQIPQTLANCLSLEFLLLQGNSFVGPIPDIRG-LTGLRFL 573
Query: 573 XXXXXXXXGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGS-P 631
G+IP + S L++LNLS N +G +P G F N SA S GN LCG P
Sbjct: 574 DLSKNNLSGTIPEYMANFSKLQNLNLSLNNFDGAVPTEGVFRNTSAMSVFGNINLCGGIP 633
Query: 632 NLHVPPCKTSI--QHT--RRKNTILLGIFLPLSTIFMIAVILLI---ARNRK-RGRQQPN 683
+L + PC + +H+ R+ TI + + + + V+ L R + R N
Sbjct: 634 SLQLQPCSVELPRRHSSVRKIITICVSAVMAALLLLCLCVVYLCWYKLRVKSVRANNNEN 693
Query: 684 DADM-PQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ 741
D P ++ + + SY EL + T GFS +NLIG G FG+V+K + VA+KV N
Sbjct: 694 DRSFSPVKSFYEKISYDELYKTTGGFSSSNLIGSGNFGAVFKGFLGSKNKAVAIKVLNL- 752
Query: 742 CGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL-FKALALEYMPHGSLEKYLY 798
C R A KSF ECE + IRHRN++K+++ CS DF+ F+AL E+MP+G+L+ +L+
Sbjct: 753 CKRGAAKSFIAECEALGGIRHRNLVKLVTICSSSDFEGNDFRALVYEFMPNGNLDMWLH 811
|
|
| TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1122 (400.0 bits), Expect = 9.4e-114, P = 9.4e-114
Identities = 274/796 (34%), Positives = 400/796 (50%)
Query: 88 QFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALS 147
Q G I SI N+ L L +N G IP + NL + L + N G IP++LS
Sbjct: 77 QLGGVISPSIGNLSFLIYLDLSNNSFGGTIPQEM-GNLFRLKYLAVGFNYLEGEIPASLS 135
Query: 148 NCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFS 207
NC+ L L L N+ G+P E+G+L KL LYL N L+G + F++ I +
Sbjct: 136 NCSRLLYLDLFSNNLGDGVPSELGSLRKLLYLYLGLNDLKGKFPV-FIRNLTSLIVLNLG 194
Query: 208 HNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVXXXXXXXXXXXXXIP 267
+N + EIP++I L + L L +N GV P +N+S+++ +
Sbjct: 195 YNHLEGEIPDDIAMLSQMVSLTLTMNNFSGVFPPAFYNLSSLENLYLLGNGFSGNLKPDF 254
Query: 268 YVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFXXXXXXXXXXX 327
LPN+ EL L GN +G+IP + N S L + KN +G I F
Sbjct: 255 GNLLPNIHELSLHGNFLTGAIPTTLANISTLEMFGIGKNRMTGSISPNFGKLENLHYLEL 314
Query: 328 XXXXXXXXXXXXXXXXXX-XNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCN 386
NC +L + +S N + G L S+ N+S L + ++
Sbjct: 315 ANNSLGSYSFGDLAFLDALTNCSHLHGLSVSYNRLGGALPT-SIVNMSTELTVLNLKGNL 373
Query: 387 VSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRL 446
+ GSIP +IGNL L L N L G +P +LG L L L N+ G IP + L
Sbjct: 374 IYGSIPHDIGNLIGLQSLLLADNLLTGPLPTSLGNLVGLGELILFSNRFSGEIPSFIGNL 433
Query: 447 AKVYQLDLSNNKLSGSIPACFGDXXXXXXXXXXXXXXISVIPSTFWNLKDILYLNLSSNS 506
++ +L LSNN G +P GD IP + +++LN+ SNS
Sbjct: 434 TQLVKLYLSNNSFEGIVPPSLGDCSHMLDLQIGYNKLNGTIPKEIMQIPTLVHLNMESNS 493
Query: 507 LTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDL 566
L+G LP +IG L+ LV++ NN SG +P +G ++ ++L+ N G+IPD G L
Sbjct: 494 LSGSLPNDIGRLQNLVELLLGNNNLSGHLPQTLGKCLSMEVIYLQENHFDGTIPDIKG-L 552
Query: 567 MXXXXXXXXXXXXXGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKL 626
M GSI E S L+ LNLS N EG +P G F N + S GNK
Sbjct: 553 MGVKNVDLSNNNLSGSISEYFENFSKLEYLNLSDNNFEGRVPTEGIFQNATLVSVFGNKN 612
Query: 627 LCGS-PNLHVPPC-----KTSIQHTRRKNTILLGIFLPLSTIFMIAVILLI-ARNRKRGR 679
LCGS L + PC +H + +G+ + ++ + ++ ++ L + RK +
Sbjct: 613 LCGSIKELKLKPCIAQAPPVETRHPSLLKKVAIGVSVGIALLLLLFIVSLSWFKKRKNNQ 672
Query: 680 QQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVF 738
+ N A E + SY +L ATDGFS +N++G G FG+V+KA +Q + VAVKV
Sbjct: 673 KINNSAPFTLEIFHEKLSYGDLRNATDGFSSSNIVGSGSFGTVFKALLQTENKIVAVKVL 732
Query: 739 NQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL-FKALALEYMPHGSLEKYL 797
N Q A KSF ECE +K IRHRN++K+++ C+ DF+ F+AL E+MP+GSL+K+L
Sbjct: 733 NMQRRGAMKSFMAECESLKDIRHRNLVKLLTACASIDFQGNEFRALIYEFMPNGSLDKWL 792
Query: 798 YSSNY--------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVA 849
+ L + +RLNI IDVAS L+YL+ P+ HCDLKPSN+LL D++ A
Sbjct: 793 HPEEVEEIHRPSRTLTLLERLNIAIDVASVLDYLHVHCHEPIAHCDLKPSNILLDDDLTA 852
Query: 850 HLSDFGITKLLTREDQ 865
H+SDFG+ +LL + DQ
Sbjct: 853 HVSDFGLARLLLKFDQ 868
|
|
| TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 315/1009 (31%), Positives = 488/1009 (48%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTI 69
TD AL K+ ++ + + +WN+S CNW VTC RVT LN+ L L G +
Sbjct: 24 TDRQALLEFKSQVSEGKRDVLS-SWNNSFPLCNWKWVTCGRKHKRVTHLNLGGLQLGGIV 82
Query: 70 PSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFE 129
+GN+S L SL L N F G IP + N+ L+ L N L G IP + SN
Sbjct: 83 SPSIGNVSFLISLDLSDNAFGGIIPREVGNLFRLEHLYMAFNSLEGGIPATL-SNCSRLL 141
Query: 130 SLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA 189
+L+L N G+PS L + T L IL L N+ G +P+ +GNLT L+ L + N ++G
Sbjct: 142 NLDLYSNPLRQGVPSELGSLTKLVILDLGRNNLKGKLPRSLGNLTSLKSLGFTDNNIEGE 201
Query: 190 YDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTI 249
++ + + + S N P I NL LE L L + G + + N+ +
Sbjct: 202 VPDELARLS-QMVGLGLSMNKFFGVFPPAIYNLSALEDLFLFGSGFSGSLKPDFGNL--L 258
Query: 250 QGVXXXXXXXXXXXXXIPYVRLPNLEELYLWG---NHFSGSI-PNFIFNASKLSRLELQK 305
+ IP L N+ L +G N +G I PNF L L+L +
Sbjct: 259 PNIRELNLGENDLVGAIP-TTLSNISTLQKFGINKNMMTGGIYPNF-GKVPSLQYLDLSE 316
Query: 306 NSFSGFI--PSTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCKYLEFIDLSSNSIDG 363
N + F L ++L N G
Sbjct: 317 NPLGSYTFGDLEFIDSLTNCTHLQLLSVGYTRLGGALPTSIANMSTELISLNLIGNHFFG 376
Query: 364 ILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQ 423
+ + +GNL L+ + ++G +P +G L L L N ++G IP +G L
Sbjct: 377 SIPQ-DIGNLI-GLQRLQLGKNMLTGPLPTSLGKLLRLGLLSLYSNRMSGEIPSFIGNLT 434
Query: 424 KLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDXXXXXXXXXXXXXX 483
+L++LY +N EG +P + + + + L + NKL+G+IP
Sbjct: 435 QLEILYLSNNSFEGIVPPSLGKCSHMLDLRIGYNKLNGTIPKEIMQIPTLVNLSMEGNSL 494
Query: 484 ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIK 543
+P+ +L++++ L+L +N +G LP +GN + ++ N+F G IPN I G+
Sbjct: 495 SGSLPNDIGSLQNLVKLSLENNKFSGHLPQTLGNCLAMEQLFLQGNSFDGAIPN-IRGLM 553
Query: 544 DLQFLFLEYNILQGSIPDSFGDLMXXXXXXXXXXXXXGSIPVSLEKLSYLKDLNLSFNKL 603
++ + L N L GSIP+ F + G +P K ++ ++ + F
Sbjct: 554 GVRRVDLSNNDLSGSIPEYFANFSKLEYLNLSINNFTGKVP---SKGNF-QNSTIVF--- 606
Query: 604 EGEIPKGGSFGNFSAESFEGNKLLCGSPNL-HVPPCKTSIQHTRRKNTILLGIFLPLSTI 662
FGN + G K L P L PP +T +K IL+ I + L +
Sbjct: 607 --------VFGNKNLCG--GIKDLKLKPCLAQEPPVETKHSSHLKKVAILVSIGIALLLL 656
Query: 663 FMIAVILLIARNRKRGRQQPNDADMPQ--EATWRRFSYLELCQATDGFSENNLIGRGGFG 720
+IA ++L ++R QQ N+ +P E + SY +L AT+GFS +N++G G FG
Sbjct: 657 LVIASMVLCWFRKRRKNQQTNNL-VPSKLEIFHEKISYGDLRNATNGFSSSNMVGSGSFG 715
Query: 721 SVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779
+V+KA + + VAVKV N Q A KSF ECE +K RHRN++K+++ C+ DF+
Sbjct: 716 TVFKALLPTESKIVAVKVLNMQRRGAMKSFMAECESLKDTRHRNLVKLLTACASTDFQGN 775
Query: 780 -FKALALEYMPHGSLEKYLYSSNY--------ILDIFQRLNIMIDVASALEYLYFGYSTP 830
F+AL EY+P+GS++ +L+ L + +RLNI+IDVAS L+YL+ P
Sbjct: 776 EFRALIYEYLPNGSVDMWLHPEEVEEIRRPPRTLTLLERLNIVIDVASVLDYLHVHCHEP 835
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ--FVTQTQTPA---TIGYMALEYGS 885
+ HCDLKPSNVLL D++ AH+SDFG+ +LL + D+ F+ Q + TIGY A EYG
Sbjct: 836 IAHCDLKPSNVLLEDDLTAHVSDFGLARLLLKFDKESFLNQLSSAGVRGTIGYAAPEYGM 895
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945
G+ S +GDVY+FGV+L+E FTGK+PT+E+F +TL + L + +I D ++L
Sbjct: 896 GGQPSIHGDVYSFGVLLLEMFTGKRPTDELFGGNLTLHSYTKLALPEKVFEIADKAILHI 955
Query: 946 E-DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993
+ F E C++ V + + C E P R+ E+ L+ I + F
Sbjct: 956 GLRVGFRTAE-CLTLVLEVGLRCCEEYPTNRLATSEVAKELISIRERFF 1003
|
|
| TAIR|locus:2170483 FLS2 "FLAGELLIN-SENSITIVE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 305/958 (31%), Positives = 474/958 (49%)
Query: 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114
+T L++S L+G IP GNL +LQSL L N G IP I N +L L DNQL+
Sbjct: 218 LTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLELYDNQLT 277
Query: 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT 174
G+IP + NL ++L + KN IPS+L T L L LS N G I +EIG L
Sbjct: 278 GKIPAEL-GNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPISEEIGFLE 336
Query: 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK 234
LE L L N G + + + +N S E+P ++G L NL L+ N
Sbjct: 337 SLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISG-ELPADLGLLTNLRNLSAHDNL 395
Query: 235 LVGVIPAEIFNMSTIQGVXXXXXXXXXXXXXIP--YVRLPNLEELYLWGNHFSGSIPNFI 292
L G IP+ I N + G+ IP + R+ NL + + NHF+G IP+ I
Sbjct: 396 LTGPIPSSISNCT---GLKLLDLSHNQMTGEIPRGFGRM-NLTFISIGRNHFTGEIPDDI 451
Query: 293 FNASKLSRLELQKNSFSGFIPSTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCKYLE 352
FN S L L + N+ +G + N K L
Sbjct: 452 FNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPREIG-----NLKDLN 506
Query: 353 FIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN 412
+ L SN G + R+ + NL+ L+ M ++ G IPEE+ ++ L L N +
Sbjct: 507 ILYLHSNGFTGRIPRE-MSNLT-LLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFS 564
Query: 413 GSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDXX 471
G IP KL+ L L NK GSIP + L+ + D+S+N L+G+IP
Sbjct: 565 GQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLASLK 624
Query: 472 XXXXXXXXXXXXIS-VIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNN 530
++ IP L+ + ++LS+N +G +P + K + +DFS NN
Sbjct: 625 NMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNN 684
Query: 531 FSGVIPNAI-GGIKDLQFLFLEYNILQGSIPDSFGDLMXXXXXXXXXXXXXGSIPVSLEK 589
SG IP+ + G+ + L L N G IP SFG++ G IP SL
Sbjct: 685 LSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLAN 744
Query: 590 LSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPC--KTSIQH-TR 646
LS LK L L+ N L+G +P+ G F N +A GN LCGS + PC K H ++
Sbjct: 745 LSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCGSKK-PLKPCTIKQKSSHFSK 803
Query: 647 RKNTIL--LGIFLPLSTIFMIAVILLIARNRKRGRQQPNDADMPQ---EATWRRFSYLEL 701
R IL LG L + ++ +IL + +++ + +++ +P +RF EL
Sbjct: 804 RTRVILIILGSAAALLLVLLLVLILTCCKKKEKKIENSSESSLPDLDSALKLKRFEPKEL 863
Query: 702 CQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSI 759
QATD F+ N+IG +VYK +++DG +AVKV N + + K F E + + +
Sbjct: 864 EQATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFSAESDKWFYTEAKTLSQL 923
Query: 760 RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVAS 818
+HRN++KI+ K KAL L +M +G+LE ++ S I + +++++ + +AS
Sbjct: 924 KHRNLVKILGFAWESG-KT--KALVLPFMENGNLEDTIHGSAAPIGSLLEKIDLCVHIAS 980
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT-REDQFVTQTQTP--AT 875
++YL+ GY P++HCDLKP+N+LL + VAH+SDFG ++L RED T + + T
Sbjct: 981 GIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGFREDGSTTASTSAFEGT 1040
Query: 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPT--NEIFNEGMTLKHWVNDWL--- 930
IGY+A E+ +V+T DV++FG+++ME T ++PT N+ ++ MTL+ V +
Sbjct: 1041 IGYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNG 1100
Query: 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+++++D L + I + +E+ + + + CT PE R + EI+T L+K+
Sbjct: 1101 RKGMVRVLDMEL--GDSIVSLKQEEAIEDFLKLCLFCTSSRPEDRPDMNEILTHLMKL 1156
|
|
| TAIR|locus:2156349 GSO2 "GASSHO 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 716 (257.1 bits), Expect = 6.3e-109, Sum P(2) = 6.3e-109
Identities = 232/785 (29%), Positives = 354/785 (45%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
LN+ L G IP RL L++LQ+L L SN +G I + ++ L+ L N+LSG +
Sbjct: 269 LNLIGNQLQGLIPKRLTELANLQTLDLSSNNLTGVIHEEFWRMNQLEFLVLAKNRLSGSL 328
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
P ICSN + L LS+ G IP+ +SNC L++L LS N G IP + L +L
Sbjct: 329 PKTICSNNTSLKQLFLSETQLSGEIPAEISNCQSLKLLDLSNNTLTGQIPDSLFQLVELT 388
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237
LYL+ N L+G + F + HN + ++P EIG L LE++ L N+ G
Sbjct: 389 NLYLNNNSLEGTLSSSISNLTNLQEFTLY-HNNLEGKVPKEIGFLGKLEIMYLYENRFSG 447
Query: 238 VIPAEIFNMSTIQ-----GVXXXXXXXXXXXXXIPYVRLPNLEELYLWGN--------H- 283
+P EI N + +Q G RL +L E L GN H
Sbjct: 448 EMPVEIGNCTRLQEIDWYGNRLSGEIPSSIGRLKDLTRL-HLRENELVGNIPASLGNCHQ 506
Query: 284 ----------FSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFXXXXXXXXXXXXXXXXX 333
SGSIP+ + L + NS G +P +
Sbjct: 507 MTVIDLADNQLSGSIPSSFGFLTALELFMIYNNSLQGNLPDSLINLKNLTRINFSSNKFN 566
Query: 334 XXXXXXXXXXXXXNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE 393
YL F D++ N +G + + +G S +L + +G IP
Sbjct: 567 GSISPLCGSSS-----YLSF-DVTENGFEGDIPLE-LGK-STNLDRLRLGKNQFTGRIPR 618
Query: 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453
G ++ L + N+L+G IP+ LG +KL + +N L G IP + +L + +L
Sbjct: 619 TFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELK 678
Query: 454 LSNNKLSGSIPACFGDXXXXXXXXXXXXXXISVIPSTFWNLKDILYLNLSSNSLTGPLPL 513
LS+NK GS+P IP NL+ + LNL N L+GPLP
Sbjct: 679 LSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLPS 738
Query: 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQF-LFLEYNILQGSIPDSFGDLMXXXXX 572
IG L L ++ S N +G IP IG ++DLQ L L YN G IP + L
Sbjct: 739 TIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLESL 798
Query: 573 XXXXXXXXGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPN 632
G +P + + L LNLS+N LEG++ K F + A++F GN LCGSP
Sbjct: 799 DLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKK--QFSRWQADAFVGNAGLCGSPL 856
Query: 633 LHVPPCKTSIQHTRR-KNTILLGIFLPLSTI-FMIAVILLIARN-----RK-RGRQQP-- 682
H + Q + K +++ L+ I M+ VI+L + +K RG
Sbjct: 857 SHCNRAGSKNQRSLSPKTVVIISAISSLAAIALMVLVIILFFKQNHDLFKKVRGGNSAFS 916
Query: 683 NDADMPQEATWRR------FSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVK 736
+++ Q + + ++ +AT +E +IG GG G VYKA +++G +AVK
Sbjct: 917 SNSSSSQAPLFSNGGAKSDIKWDDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVK 976
Query: 737 -VFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEK 795
+ + + KSF+ E + + +IRHR+++K++ CS L L EYM +GS+
Sbjct: 977 KILWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCS-SKADGL-NLLIYEYMANGSVWD 1034
Query: 796 YLYSS 800
+L+++
Sbjct: 1035 WLHAN 1039
|
|
| TAIR|locus:2120362 GSO1 "GASSHO1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 685 (246.2 bits), Expect = 1.5e-107, Sum P(2) = 1.5e-107
Identities = 191/563 (33%), Positives = 270/563 (47%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
L++ L G IP L +L +LQ+L L +N +G IP +N+ L L +N LSG +
Sbjct: 268 LSLMANQLQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSL 327
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
P +ICSN E L LS G IP LS C L+ L LS N AG IP+ + L +L
Sbjct: 328 PKSICSNNTNLEQLVLSGTQLSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELT 387
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237
+LYL N L+G + V + HN + ++P EI LR LEVL L N+ G
Sbjct: 388 DLYLHNNTLEGTLSPSISNLTNLQWLVLY-HNNLEGKLPKEISALRKLEVLFLYENRFSG 446
Query: 238 VIPAEIFNMSTIQGVXXXXXXXXXXXXXIPYV-RLPNLEELYLWGNHFSGSIPNFIFNAS 296
IP EI N ++++ + P + RL L L+L N G +P + N
Sbjct: 447 EIPQEIGNCTSLKMIDMFGNHFEGEIP--PSIGRLKELNLLHLRQNELVGGLPASLGNCH 504
Query: 297 KLSRLELQKNSFSGFIPSTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCKYLEFIDL 356
+L+ L+L N SG IPS+F + + L I+L
Sbjct: 505 QLNILDLADNQLSGSIPSSFGFLKGLEQLMLYNNSLQGNLPDSLI-----SLRNLTRINL 559
Query: 357 SSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP 416
S N ++G + G+ S+ L FD+++ IP E+GN NL LG N L G IP
Sbjct: 560 SHNRLNGTI-HPLCGSSSY-LS-FDVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIP 616
Query: 417 ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDXXXXXXX 476
TLGK+++L +L N L G+IP ++ K+ +DL+NN LSG IP G
Sbjct: 617 WTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQLGEL 676
Query: 477 XXXXXXXISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP 536
+ +P+ +N +L L+L NSL G +P EIGNL L ++ N FSG +P
Sbjct: 677 KLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNLGALNVLNLDKNQFSGSLP 736
Query: 537 NAIGGIKDLQFLFLEYNILQGSIPDSFGDLMXXXXXXXXXXXX-XGSIPVSLEKLSYLKD 595
A+G + L L L N L G IP G L G IP ++ LS L+
Sbjct: 737 QAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSALDLSYNNFTGDIPSTIGTLSKLET 796
Query: 596 LNLSFNKLEGEIPKGGSFGNFSA 618
L+LS N+L GE+P GS G+ +
Sbjct: 797 LDLSHNQLTGEVP--GSVGDMKS 817
|
|
| TAIR|locus:2047525 AT2G24130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 278/851 (32%), Positives = 430/851 (50%)
Query: 131 LNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK-LEELYLSFNGLQGA 189
L++S G I +++N T L +L LS N F G IP EIG+L + L++L LS N L G
Sbjct: 71 LDISGRDLGGEISPSIANLTGLTVLDLSRNFFVGKIPPEIGSLHETLKQLSLSENLLHGN 130
Query: 190 YDHGFLQIFVKNIFVQFSHNFSKCEIPNEI---GNLRNLEVLALGLNKLVGVIPAEIFNM 246
L + + +++ N IP ++ G+ +L+ + L N L G IP
Sbjct: 131 IPQE-LGLLNRLVYLDLGSNRLNGSIPVQLFCNGSSSSLQYIDLSNNSLTGEIPLNYH-- 187
Query: 247 STIQGVXXXXXXXXXXXXXIP--YVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQ 304
++ + +P NL+ + L N SG +P+ + SK+ +L+
Sbjct: 188 CHLKELRFLLLWSNKLTGTVPSSLSNSTNLKWMDLESNMLSGELPSQVI--SKMPQLQFL 245
Query: 305 KNSFSGFIP---STFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCKYLEF----IDLS 357
S++ F+ +T + ++L I L
Sbjct: 246 YLSYNHFVSHNNNTNLEPFFASLANSSDLQELELAGNSLGGEITSSVRHLSVNLVQIHLD 305
Query: 358 SNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI 417
N I G + + + NL + L + ++S +SG IP E+ L+ L YL N+L G IP+
Sbjct: 306 QNRIHGSIPPE-ISNLLN-LTLLNLSSNLLSGPIPRELCKLSKLERVYLSNNHLTGEIPM 363
Query: 418 TLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDXXXXXXXX 477
LG + +L +L N L GSIPD L+++ +L L N LSG++P G
Sbjct: 364 ELGDIPRLGLLDVSRNNLSGSIPDSFGNLSQLRRLLLYGNHLSGTVPQSLGKCINLEILD 423
Query: 478 XXXXXXISVIP-STFWNLKDI-LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVI 535
IP NL+++ LYLNLSSN L+GP+PLE+ + +++ +D S N SG I
Sbjct: 424 LSHNNLTGTIPVEVVSNLRNLKLYLNLSSNHLSGPIPLELSKMDMVLSVDLSSNELSGKI 483
Query: 536 PNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMXXXXXXXXXXXXXGSIPVSLEKLSYLKD 595
P +G L+ L L N ++P S G L G+IP S ++ S LK
Sbjct: 484 PPQLGSCIALEHLNLSRNGFSSTLPSSLGQLPYLKELDVSFNRLTGAIPPSFQQSSTLKH 543
Query: 596 LNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQHTRRKNTILLGI 655
LN SFN L G + GSF + ESF G+ LLCGS + CK +H + ++LL +
Sbjct: 544 LNFSFNLLSGNVSDKGSFSKLTIESFLGDSLLCGSIK-GMQACKK--KH--KYPSVLLPV 598
Query: 656 FLPLSTIFMIAVI--LLIARNR--KR----GRQQPNDADMPQE--ATWRRFSYLELCQAT 705
L L ++ V L+ R+R K +++ D + + + R SY +L AT
Sbjct: 599 LLSLIATPVLCVFGYPLVQRSRFGKNLTVYAKEEVEDEEKQNQNDPKYPRISYQQLIAAT 658
Query: 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFK-SFDVECEVMKSIRHRNI 764
GF+ ++LIG G FG VYK +++ +VAVKV + + F SF EC+++K RHRN+
Sbjct: 659 GGFNASSLIGSGRFGHVYKGVLRNNTKVAVKVLDPKTALEFSGSFKRECQILKRTRHRNL 718
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI---LDIFQRLNIMIDVASALE 821
I+II+ CS K F AL L MP+GSLE++LY Y LD+ Q +NI DVA +
Sbjct: 719 IRIITTCS----KPGFNALVLPLMPNGSLERHLYPGEYSSKNLDLIQLVNICSDVAEGIA 774
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA------- 874
YL+ V+HCDLKPSN+LL D M A ++DFGI++L+ ++ V+ + +
Sbjct: 775 YLHHYSPVKVVHCDLKPSNILLDDEMTALVTDFGISRLVQGVEETVSTDDSVSFGSTDGL 834
Query: 875 ---TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931
++GY+A EYG R ST+GDVY+FGV+L+E +G++PT+ + NEG +L ++
Sbjct: 835 LCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVSGRRPTDVLVNEGSSLHEFMKSHYP 894
Query: 932 ISIMKIVDGSL 942
S+ I++ +L
Sbjct: 895 DSLEGIIEQAL 905
|
|
| TAIR|locus:2097310 BAM2 "BARELY ANY MERISTEM 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
Identities = 297/954 (31%), Positives = 452/954 (47%)
Query: 47 TCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLL 106
T D HS +T+ N+S S T + +L + SL L SG++ + ++ L+ L
Sbjct: 39 TIDEHSPLLTSWNLSTTFCSWTGVTCDVSLRHVTSLDLSGLNLSGTLSSDVAHLPLLQNL 98
Query: 107 SFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSN-CTYLRILRLSYNDFAGG 165
S NQ+SG IP I SNL LNLS N+F+G P LS+ LR+L L N+ G
Sbjct: 99 SLAANQISGPIPPQI-SNLYELRHLNLSNNVFNGSFPDELSSGLVNLRVLDLYNNNLTGD 157
Query: 166 IPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL 225
+P + NLT+L L+L N G + V ++ S N +IP EIGNL L
Sbjct: 158 LPVSLTNLTQLRHLHLGGNYFSGKIPATYGTWPVLE-YLAVSGNELTGKIPPEIGNLTTL 216
Query: 226 EVLALGL-NKLVGVIPAEIFNMSTIQGVXXXXXXXXXXXXXIPYV-RLPNLEELYLWGNH 283
L +G N +P EI N+S + V P + +L L+ L+L N
Sbjct: 217 RELYIGYYNAFENGLPPEIGNLSEL--VRFDAANCGLTGEIPPEIGKLQKLDTLFLQVNA 274
Query: 284 FSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
F+G+I + S L ++L N F+G IP++F
Sbjct: 275 FTGTITQELGLISSLKSMDLSNNMFTGEIPTSFSQLKNLTLLNLFRNKLYGAIPEFIG-- 332
Query: 344 XXXNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIG 403
LE + L N+ G + +K +G + L I D+S ++G++P + + L+
Sbjct: 333 ---EMPELEVLQLWENNFTGSIPQK-LGE-NGRLVILDLSSNKLTGTLPPNMCSGNRLMT 387
Query: 404 FYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSI 463
GN L GSIP +LGK + L + +N L GSIP E+ L K+ Q++L +N L+G +
Sbjct: 388 LITLGNFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKELFGLPKLSQVELQDNYLTGEL 447
Query: 464 PACFGDXXXXXXXXXXXXXXIS-VIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLV 522
P G +S +P+ NL + L L N +G +P EIG L+ L
Sbjct: 448 PISGGGVSGDLGQISLSNNQLSGSLPAAIGNLSGVQKLLLDGNKFSGSIPPEIGRLQQLS 507
Query: 523 KIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMXXXXXXXXXXXXXGS 582
K+DFS N FSG I I K L F+ L N L G IP+ + GS
Sbjct: 508 KLDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGDIPNELTGMKILNYLNLSRNHLVGS 567
Query: 583 IPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPC-KTS 641
IPV++ + L ++ S+N L G +P G F F+ SF GN LCG P ++ PC K +
Sbjct: 568 IPVTIASMQSLTSVDFSYNNLSGLVPSTGQFSYFNYTSFVGNSHLCG-P--YLGPCGKGT 624
Query: 642 IQHTRRKNTILLGIFLPLSTIFMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYLEL 701
Q + + + L L +F V ++A + R + ++A + ++R +
Sbjct: 625 HQSHVKPLSATTKLLLVLGLLFCSMVFAIVAIIKARSLRNASEAKAWRLTAFQRLDFT-- 682
Query: 702 CQ-ATDGFSENNLIGRGGFGSVYKARIQDGMEVAVK-VFNQQCGRAFK-SFDVECEVMKS 758
C D E+N+IG+GG G VYK + G VAVK + G + F+ E + +
Sbjct: 683 CDDVLDSLKEDNIIGKGGAGIVYKGTMPKGDLVAVKRLATMSHGSSHDHGFNAEIQTLGR 742
Query: 759 IRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVA 817
IRHR+I++++ CS + L EYMP+GSL + L+ L R I ++ A
Sbjct: 743 IRHRHIVRLLGFCSNHETNLL----VYEYMPNGSLGEVLHGKKGGHLHWNTRYKIALEAA 798
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
L YL+ S ++H D+K +N+LL N AH++DFG+ K L + + G
Sbjct: 799 KGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYG 858
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN---DWLLISI 934
Y+A EY +V DVY+FGV+L+E TGKKP E F +G+ + WV D +
Sbjct: 859 YIAPEYAYTLKVDEKSDVYSFGVVLLELITGKKPVGE-FGDGVDIVQWVRSMTDSNKDCV 917
Query: 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+K++D L S V + ++ VF +A+ C E +R +E+V L +I
Sbjct: 918 LKVIDLRLSS------VPVHE-VTHVFYVALLCVEEQAVERPTMREVVQILTEI 964
|
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| C0LGP4 | Y3475_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.3916 | 0.9500 | 0.9425 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00025217001 | SubName- Full=Chromosome chr9 scaffold_33, whole genome shotgun sequence; (2202 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1002 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-121 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-42 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-41 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 7e-41 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-40 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-40 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 6e-38 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 5e-37 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 5e-33 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-29 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-27 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-27 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 2e-26 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-25 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-25 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 4e-25 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-24 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-24 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 3e-24 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 6e-24 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-23 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 4e-23 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 4e-23 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-22 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 3e-22 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 8e-22 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 1e-21 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 1e-21 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 4e-21 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 4e-21 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 5e-21 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 5e-21 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 5e-21 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 1e-20 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-20 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-20 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-20 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 7e-20 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 1e-19 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 2e-19 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-19 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 3e-19 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-19 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 6e-19 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-18 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-18 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 4e-18 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 6e-18 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 8e-18 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-17 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 1e-17 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 2e-17 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 3e-17 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 3e-17 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 7e-17 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 8e-17 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 1e-16 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 1e-16 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 1e-16 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-16 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-16 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-16 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 4e-16 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 5e-16 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 6e-16 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 7e-16 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 7e-16 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 1e-15 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-15 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 1e-15 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-15 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 3e-15 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 7e-15 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 1e-14 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 2e-14 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 2e-14 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-14 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 3e-14 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 4e-14 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 6e-14 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 6e-14 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 6e-14 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 8e-14 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 9e-14 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 1e-13 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 1e-13 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-13 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 1e-13 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 3e-13 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 3e-13 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-13 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 4e-13 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 4e-13 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-13 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 5e-13 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 7e-13 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 8e-13 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 8e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 9e-13 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 1e-12 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 1e-12 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 1e-12 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-12 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 2e-12 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 2e-12 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 2e-12 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 2e-12 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 2e-12 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 2e-12 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 3e-12 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 3e-12 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 4e-12 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 4e-12 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 4e-12 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 4e-12 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 5e-12 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 6e-12 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 6e-12 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 7e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-12 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 9e-12 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 9e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-11 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 1e-11 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 1e-11 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-11 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 1e-11 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 2e-11 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-11 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 2e-11 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 3e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-11 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 4e-11 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 6e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-11 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 7e-11 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 8e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 9e-11 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 1e-10 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 1e-10 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 2e-10 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 2e-10 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 3e-10 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 1e-09 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-09 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 1e-09 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 1e-09 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 1e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-09 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 3e-09 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 3e-09 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 3e-09 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 4e-09 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-09 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 4e-09 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 6e-09 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 6e-09 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 6e-09 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 9e-09 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 1e-08 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 1e-08 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 1e-08 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 1e-08 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 1e-08 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 2e-08 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 2e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-08 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 3e-08 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 3e-08 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 3e-08 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 3e-08 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 3e-08 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 3e-08 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 3e-08 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 5e-08 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 6e-08 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 6e-08 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 7e-08 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 8e-08 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 9e-08 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-07 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 1e-07 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 1e-07 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 1e-07 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 2e-07 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 2e-07 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 2e-07 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 3e-07 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 3e-07 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 3e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-07 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 4e-07 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 4e-07 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 4e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-07 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 5e-07 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 5e-07 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 5e-07 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 5e-07 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 6e-07 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 6e-07 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 8e-07 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 9e-07 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 9e-07 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 9e-07 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 1e-06 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 1e-06 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 1e-06 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-06 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 1e-06 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-06 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 2e-06 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 2e-06 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-06 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-06 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 2e-06 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-06 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 3e-06 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 3e-06 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 3e-06 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 3e-06 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 3e-06 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 4e-06 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 4e-06 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 5e-06 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 5e-06 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 6e-06 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 7e-06 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 8e-06 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 8e-06 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 1e-05 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 1e-05 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 1e-05 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 1e-05 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 1e-05 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 1e-05 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 2e-05 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 2e-05 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 2e-05 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 2e-05 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 2e-05 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 3e-05 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 3e-05 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 3e-05 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 3e-05 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 5e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 5e-05 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 5e-05 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 6e-05 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 6e-05 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 6e-05 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 6e-05 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 6e-05 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 7e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 9e-05 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 9e-05 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 9e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-04 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 1e-04 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 1e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-04 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 2e-04 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 2e-04 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 2e-04 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 2e-04 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 2e-04 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 2e-04 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 3e-04 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 3e-04 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 3e-04 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 3e-04 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 3e-04 | |
| PHA02882 | 294 | PHA02882, PHA02882, putative serine/threonine kina | 3e-04 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 3e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-04 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 4e-04 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 4e-04 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 5e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 5e-04 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 7e-04 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 7e-04 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 0.001 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 0.001 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 0.002 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 0.002 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 0.003 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 0.003 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 0.003 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 0.003 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 0.003 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 0.004 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 392 bits (1009), Expect = e-121
Identities = 317/994 (31%), Positives = 488/994 (49%), Gaps = 94/994 (9%)
Query: 11 DLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIP 70
+L+ L + K+ I NDP + + NWNSS C W G+TC+ +S RV ++++S ++SG I
Sbjct: 30 ELELLLSFKSSI-NDPLKYLS-NWNSSADVCLWQGITCN-NSSRVVSIDLSGKNISGKIS 86
Query: 71 SRLGNLSSLQSLFLHSNQFSGSIPFSIFNI-HTLKLLSFGDNQLSGEIPTNICSNLPFFE 129
S + L +Q++ L +NQ SG IP IF +L+ L+ +N +G IP NL E
Sbjct: 87 SAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNL---E 143
Query: 130 SLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA 189
+L+LS NM G IP+ + + + L++L L N G IP + NLT LE L L+ N L G
Sbjct: 144 TLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVG- 202
Query: 190 YDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTI 249
+IP E+G +++L+ + LG N L G IP EI ++++
Sbjct: 203 ------------------------QIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSL 238
Query: 250 QGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFS 309
+ L N+L+G + S L NL+ L+L+ N SG IP IF+ KL L+L NS S
Sbjct: 239 NHLDLVYNNLTGPIPS-SLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297
Query: 310 GFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKS 369
G IP L+NL+ L L +N+ T +L++ L+ + L SN G + K+
Sbjct: 298 GEIPELVIQLQNLEILHLFSNNFTG-----KIPVALTSLPRLQVLQLWSNKFSGEIP-KN 351
Query: 370 VGNLSHSLKIFDMSDCNVSGSIPEEI---GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQ 426
+G ++L + D+S N++G IPE + GNL LI F N+L G IP +LG + L+
Sbjct: 352 LGK-HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILF---SNSLEGEIPKSLGACRSLR 407
Query: 427 VLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISV 486
+ DN G +P E +L VY LD+SNN L G I + D+ SL+ LSLA N+
Sbjct: 408 RVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGG 467
Query: 487 IPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQ 546
+P +F + K + L+LS N +G +P ++G+L L+++ S N SG IP+ + K L
Sbjct: 468 LPDSFGS-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLV 526
Query: 547 FLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606
L L +N L G IP SF ++ L L+LS N LSG IP +L + L +N+S N L G
Sbjct: 527 SLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS 586
Query: 607 IPKGGSFGNFSAESFEGNKLLCGSPNLH-VPPCKTSIQHTRR--KNTILLGIFLPLSTIF 663
+P G+F +A + GN LCG +PPCK + T LG FL L+ +
Sbjct: 587 LPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVA 646
Query: 664 MIAVILLIARNRKRGRQQPNDADMPQEATWRRFS-YLELCQATDGFSENNLIGRGGFGSV 722
V + N + R + D + + S + + E N+I RG G+
Sbjct: 647 FGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGAS 706
Query: 723 YKAR-IQDGMEVAVKVFNQQCGRAFKSF-DVECEVMKSIRHRNIIKIISCCSIGDFKALF 780
YK + I++GM+ VK N S E M ++H NI+K+I C L
Sbjct: 707 YKGKSIKNGMQFVVKEIND-----VNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLI 761
Query: 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840
EY+ +L + L + L +R I I +A AL +L+ S V+ +L P
Sbjct: 762 H----EYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEK 813
Query: 841 VLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGV 900
+++ HL L+ T T+ + Y+A E ++ D+Y FG+
Sbjct: 814 IIIDGKDEPHL-------RLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGL 866
Query: 901 MLMETFTGKKPTNEIFNEGMTLKHW---------VNDWLLISIMKIVDGSLLSREDIQFV 951
+L+E TGK P + F ++ W ++ W+ SI D S+ E ++
Sbjct: 867 ILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG--DVSVNQNEIVE-- 922
Query: 952 AKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
V N+A+ CT P R A +++ L
Sbjct: 923 --------VMNLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 154 bits (393), Expect = 2e-42
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 35/282 (12%)
Query: 711 NNLIGRGGFGSVYKARIQD-----GMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNI 764
+G G FG VYK +++ +EVAVK + + F E +M+ + H N+
Sbjct: 4 GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
+K++ C+ + L+ + +EYM G L YL + L + L+ + +A +EYL
Sbjct: 64 VKLLGVCTEEE--PLY--IVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYL- 118
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG 884
S IH DL N L+G+N+V +SDFG+++ L +D + + I +MA E
Sbjct: 119 --ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY-DDDYYRKRGGKLPIRWMAPESL 175
Query: 885 SEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
EG+ ++ DV++FGV+L E FT G++P GM+ + + + +G L
Sbjct: 176 KEGKFTSKSDVWSFGVLLWEIFTLGEQP-----YPGMSNEEVLE--------YLKNGYRL 222
Query: 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+ C ++++ ++C E PE R E+V L
Sbjct: 223 PQP-------PNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 2e-41
Identities = 81/283 (28%), Positives = 132/283 (46%), Gaps = 36/283 (12%)
Query: 711 NNLIGRGGFGSVYKARIQDG-----MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNI 764
+G G FG VYK ++ +EVAVK + + + F E +M+ + H NI
Sbjct: 4 GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYL-YSSNYILDIFQRLNIMIDVASALEYL 823
+K++ C+ + L + +EYMP G L YL + L + L+ + +A +EYL
Sbjct: 64 VKLLGVCTEEE--PLM--IVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL 119
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY 883
S IH DL N L+G+N+V +SDFG+++ L +D + I +MA E
Sbjct: 120 E---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY-DDDYYKVKGGKLPIRWMAPES 175
Query: 884 GSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942
EG+ ++ DV++FGV+L E FT G++P GM+ + + G
Sbjct: 176 LKEGKFTSKSDVWSFGVLLWEIFTLGEEP-----YPGMSNAEVLE--------YLKKGYR 222
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
L + C ++ + ++C E PE R E+V L
Sbjct: 223 LPKP-------PNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 7e-41
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 34/279 (12%)
Query: 714 IGRGGFGSVYKARI-----QDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG VYK + +VAVK + + F E +MK + H NI+++
Sbjct: 7 LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRL 66
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ C+ G+ L+ + EYMP G L +L L + L + + +A +EYL
Sbjct: 67 LGVCTQGE--PLY--IVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLE--- 119
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG 887
S +H DL N L+ +N+V +SDFG+++ + +D + + I +MA E +G
Sbjct: 120 SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDG 179
Query: 888 RVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946
+ ++ DV++FGV+L E FT G++P GM+ + + + DG L R
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTLGEQP-----YPGMSNEEVLE--------LLEDGYRLPRP 226
Query: 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
E C ++ + ++C PE R E+V L
Sbjct: 227 -------ENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 149 bits (380), Expect = 2e-40
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 712 NLIGRGGFGSVYKARIQDG----MEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIK 766
+G G FG VYK +++ EVAVK + + F E VMK + H N+++
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYL--------YSSNYILDIFQRLNIMIDVAS 818
++ C+ + L+ L LEYM G L YL L + L+ I +A
Sbjct: 61 LLGVCTEEE--PLY--LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAK 116
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY 878
+EYL S +H DL N L+G+++V +SDFG+++ + +D + +T I +
Sbjct: 117 GMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRW 173
Query: 879 MALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937
MA E +G ++ DV++FGV+L E FT G P + NE + L++ +
Sbjct: 174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEV-LEY------------L 220
Query: 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
G L + E C ++ + + C PE R E+V RL
Sbjct: 221 RKGYRLPK-------PEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 3e-40
Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 13/195 (6%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G GGFG+VY AR + G +VA+K+ ++ + E E++K + H NI+K+
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ L +EY GSL+ L + L + L I++ + LEYL +S +
Sbjct: 61 EDENHLYLV----MEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYL---HSNGI 113
Query: 832 IHCDLKPSNVLLG-DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE-YGSEGRV 889
IH DLKP N+LL DN L+DFG++KLLT + + T YMA E +G
Sbjct: 114 IHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV--GTPAYMAPEVLLGKGYY 171
Query: 890 STNGDVYNFGVMLME 904
S D+++ GV+L E
Sbjct: 172 SEKSDIWSLGVILYE 186
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 6e-38
Identities = 72/272 (26%), Positives = 119/272 (43%), Gaps = 30/272 (11%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
+G G FG VY AR + G VA+KV ++ + + E +++K ++H NI+++
Sbjct: 5 EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
D L+ L +EY G L L L + + + SALEYL+ S
Sbjct: 65 VFE--DEDKLY--LVMEYCEGGDLFDLL-KKRGRLSEDEARFYLRQILSALEYLH---SK 116
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
++H DLKP N+LL ++ L+DFG+ + L ++ T TP YMA E
Sbjct: 117 GIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPE---YMAPEVLLGKGY 173
Query: 890 STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949
D+++ GV+L E TGK P + D L+ + K + +
Sbjct: 174 GKAVDIWSLGVILYELLTGKPP-------------FPGDDQLLELFKKIGKPKPPFPPPE 220
Query: 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + + + + PEKR+ A+E
Sbjct: 221 WDISPEAKDLIRKL---LVKD-PEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 5e-37
Identities = 81/276 (29%), Positives = 121/276 (43%), Gaps = 34/276 (12%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV----ECEVMKSIRHRNIIKII 768
+G G FG+VYKA+ G VAVK+ ++ D E +++ + H NI+++I
Sbjct: 7 LGSGSFGTVYKAKHKGTGKIVAVKILKKR--SEKSKKDQTARREIRILRRLSHPNIVRLI 64
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
D L+ L +EY G L YL L + I + + LEYL+ S
Sbjct: 65 DAF--EDKDHLY--LVMEYCEGGDLFDYLSRGG-PLSEDEAKKIALQILRGLEYLH---S 116
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE-YGSEG 887
+IH DLKP N+LL +N V ++DFG+ K L + +T T T YMA E
Sbjct: 117 NGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLT-TFV-GTPWYMAPEVLLGGN 174
Query: 888 RVSTNGDVYNFGVMLMETFTGKKP-TNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946
DV++ GV+L E TGK P + E + + L I +I+ L E
Sbjct: 175 GYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQL-----------IRRILGPPLEFDE 223
Query: 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
E+ + + P KR A+EI+
Sbjct: 224 PKWSSGSEEAKDLIKKC---LNKD-PSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 5e-33
Identities = 89/295 (30%), Positives = 131/295 (44%), Gaps = 48/295 (16%)
Query: 714 IGRGGFGSVYKARI------QDGMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIK 766
+G G FG V+ D VAVK + A K F+ E E++ + +H NI+K
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN-------------YILDIFQRLNIM 813
C+ GD + EYM HG L K+L S L + Q L I
Sbjct: 73 FYGVCTEGD--PPI--MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP 873
+ +AS + YL S +H DL N L+G ++V + DFG+++ + D + T
Sbjct: 129 VQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTM 185
Query: 874 ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLI 932
I +M E + +T DV++FGV+L E FT GK+P + NE +
Sbjct: 186 LPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEV------------ 233
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
I I G LL R C S V+++ + C P++RIN K+I RL K
Sbjct: 234 -IECITQGRLLQR-------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 1e-29
Identities = 74/290 (25%), Positives = 116/290 (40%), Gaps = 53/290 (18%)
Query: 712 NLIGRGGFGSVYKARIQD-GMEVAVKV--FNQQCGRAFKSFDVECEVMKSIRHRNIIKII 768
L+GRG FGSVY A +D G +AVK + ++ + E ++ S++H NI++
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNI------MIDVASALEY 822
+ L + LEY+ GSL L F +L + L Y
Sbjct: 66 GSERDEEKNTLN--IFLEYVSGGSLSSLLKK-------FGKLPEPVIRKYTRQILEGLAY 116
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL---TREDQFVTQTQTPATIGYM 879
L+ S ++H D+K +N+L+ + V L+DFG K L + + TP +M
Sbjct: 117 LH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPY---WM 170
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939
A E D+++ G ++E TGK P +E+ N L I
Sbjct: 171 APEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYK-------IGSSGEPP 223
Query: 940 G--SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
LS E+ F+ +C P+KR A E LL+
Sbjct: 224 EIPEHLS---------EEAKDFL----RKCLRRDPKKRPTADE----LLQ 256
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 1e-27
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
F+ +G G FG V++ ++ + VA+K+ + F E + +K +RH+++I +
Sbjct: 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFG 826
+ CS+G+ + E M GSL +L S +L + +++ VA + YL
Sbjct: 68 FAVCSVGEPVYIIT----ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYL--- 120
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
IH DL N+L+G+++V ++DFG+ +L+ ++ + + A E S
Sbjct: 121 EEQNSIHRDLAARNILVGEDLVCKVADFGLARLI--KEDVYLSSDKKIPYKWTAPEAASH 178
Query: 887 GRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945
G ST DV++FG++L E FT G+ P GM +I G +
Sbjct: 179 GTFSTKSDVWSFGILLYEMFTYGQVPY-----PGMNNHE--------VYDQITAGYRMPC 225
Query: 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+C ++ + +EC PE R + K + L
Sbjct: 226 -------PAKCPQEIYKIMLECWAAEPEDRPSFKALREEL 258
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 2e-27
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 29/287 (10%)
Query: 712 NLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNII 765
+G G FG V R G +VAVK N +S F+ E E+++++ H NI+
Sbjct: 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
K C ++L L +EY+P GSL YL +++ + L + ++YL
Sbjct: 70 KYKGVCEKPGGRSL--RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG- 126
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT---QTQTPATIGYMALE 882
S IH DL N+L+ + +SDFG+ K+L + + ++P I + A E
Sbjct: 127 --SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESP--IFWYAPE 182
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE---IFNEGMTLKHWVNDWL-LISIMKIV 938
+ S+ DV++FGV L E FT P+ F + + L+ ++K
Sbjct: 183 CLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK-- 240
Query: 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+G L R C V+++ C P+ R + +++ +
Sbjct: 241 EGERLPRPP-------SCPDEVYDLMKLCWEAEPQDRPSFADLILIV 280
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 2e-26
Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 49/290 (16%)
Query: 714 IGRGGFGSVYKAR------IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG V+ A +D M VAVK A K F E E++ +++H +I+K
Sbjct: 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYS---------------SNYILDIFQRLNI 812
C GD L + EYM HG L K+L + + L + Q L+I
Sbjct: 73 YGVCGDGD--PLI--MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 128
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT 872
+AS + YL S +H DL N L+G N++ + DFG+++ + D + T
Sbjct: 129 ASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 185
Query: 873 PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLL 931
I +M E + +T DV++FGV+L E FT GK+P ++ N
Sbjct: 186 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT------------- 232
Query: 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
I I G +L R + C V+++ + C P++R+N KEI
Sbjct: 233 EVIECITQGRVLERPRV-------CPKEVYDIMLGCWQREPQQRLNIKEI 275
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 713 LIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFK-SFDVECEVMKSIRHRNIIKIISCC 771
IG+G FG VYK ++ EVAVK K F E E++K H NI+K+I C
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ ++ + +E +P GSL +L L + + L + +D A+ +EYL S
Sbjct: 62 V--QKQPIY--IVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYL---ESKNC 114
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT------QTPATIGYMALEYGS 885
IH DL N L+G+N V +SDFG ++RE++ T Q P I + A E +
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFG----MSREEEGGIYTVSDGLKQIP--IKWTAPEALN 168
Query: 886 EGRVSTNGDVYNFGVMLMETFTG 908
GR ++ DV+++G++L ETF+
Sbjct: 169 YGRYTSESDVWSYGILLWETFSL 191
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 36/275 (13%)
Query: 713 LIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG+G FG V + G +VAVK A ++F E VM ++RH N+++++
Sbjct: 13 TIGKGEFGDVMLGDYR-GQKVAVKCLKDD-STAAQAFLAEASVMTTLRHPNLVQLLGVVL 70
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYS-SNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
G+ L+ + EYM GSL YL S ++ + Q+L +DV +EYL
Sbjct: 71 QGN--PLY--IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNF 123
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVST 891
+H DL NVL+ +++VA +SDFG+ K + Q + + A E E + ST
Sbjct: 124 VHRDLAARNVLVSEDLVAKVSDFGLAK-----EASQGQDSGKLPVKWTAPEALREKKFST 178
Query: 892 NGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQF 950
DV++FG++L E ++ G+ P + LK V + G +
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPR-----IPLKDVVP--------HVEKGYRME------ 219
Query: 951 VAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
A E C V+ + +C P KR K++ +L
Sbjct: 220 -APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQL 253
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 4e-25
Identities = 81/295 (27%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 714 IGRGGFGSVYKARI------QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG V+ A QD M VAVK + A + F E E++ ++H++I++
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN---YILD-----------IFQRLNIM 813
C+ G + EYM HG L ++L S IL + Q L I
Sbjct: 73 YGVCTEGRPLLM----VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIA 128
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP 873
+AS + YL S +H DL N L+G +V + DFG+++ + D + +T
Sbjct: 129 SQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 185
Query: 874 ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLI 932
I +M E + +T D+++FGV+L E FT GK+P ++ N
Sbjct: 186 LPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE------------- 232
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+I I G L R C V+ + C P++R+ K+I +RL
Sbjct: 233 AIECITQGRELER-------PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG+GGFG VYKAR + G EVA+KV + + E +++K +H NI+K
Sbjct: 8 IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL 67
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
D L+ + +E+ GSL+ L S+N L Q + ++ LEYL+ S +I
Sbjct: 68 KKDE--LW--IVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH---SNGII 120
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H D+K +N+LL + L DFG++ L+ T TP +MA E +
Sbjct: 121 HRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTP---YWMAPEVINGKPYDYK 177
Query: 893 GDVYNFGVMLMETFTGKKP 911
D+++ G+ +E GK P
Sbjct: 178 ADIWSLGITAIELAEGKPP 196
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 51/274 (18%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V+ +VAVK ++F E ++MK +RH ++++ + CS
Sbjct: 14 LGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP-EAFLQEAQIMKKLRHDKLVQLYAVCSE 72
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMID----VASALEYLYFGYST 829
+ ++ + EYM GSL +L S RL ++D +A + YL S
Sbjct: 73 EE--PIY--IVTEYMSKGSLLDFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLE---SR 122
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
IH DL N+L+G+N+V ++DFG+ +L+ +D++ + I + A E + GR
Sbjct: 123 NYIHRDLAARNILVGENLVCKIADFGLARLI-EDDEYTAREGAKFPIKWTAPEAANYGRF 181
Query: 890 STNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDI 948
+ DV++FG++L E T G+ P GMT +RE +
Sbjct: 182 TIKSDVWSFGILLTEIVTYGRVPY-----PGMT----------------------NREVL 214
Query: 949 QFVAK-------EQCMSFVFNMAMECTVESPEKR 975
+ V + C ++++ ++C + PE+R
Sbjct: 215 EQVERGYRMPRPPNCPEELYDLMLQCWDKDPEER 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 3e-24
Identities = 77/275 (28%), Positives = 117/275 (42%), Gaps = 37/275 (13%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG G G VYKA G EVA+K + + E +MK +H NI+
Sbjct: 27 IGEGASGEVYKATDRATGKEVAIKKMRLRKQNK-ELIINEILIMKDCKHPNIVDYYDSYL 85
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+GD L+ + +EYM GSL + + ++ Q + +V LEYL+ S VI
Sbjct: 86 VGD--ELW--VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQNVI 138
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTRE-DQFVTQTQTPATIGYMALEYGSEGRVST 891
H D+K N+LL + L+DFG LT+E + + TP +MA E
Sbjct: 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPY---WMAPEVIKRKDYGP 195
Query: 892 NGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS---IMKIVDGSLLSREDI 948
D+++ G+M +E G+ P L LI+ I + + S E
Sbjct: 196 KVDIWSLGIMCIEMAEGEPPYLR-EPPLRALF-------LITTKGIPPLKNPEKWSPEFK 247
Query: 949 QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVT 983
F+ K C V+ PEKR +A+E++
Sbjct: 248 DFLNK-------------CLVKDPEKRPSAEELLQ 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 6e-24
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 714 IGRGGFGSVYKARI--QDGME----VAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIK 766
+G G FG VYK + + VA+K + + + F E E+M ++H NI+
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLN 811
++ C+ K + EY+ HG L ++L ++ LD L+
Sbjct: 73 LLGVCT----KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLH 128
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
I I +A+ +EYL S +H DL N L+G+ + +SDFG+++ + D + Q++
Sbjct: 129 IAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSK 185
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930
+ + +M E G+ +T D+++FGV+L E F+ G +P N+
Sbjct: 186 SLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ------------ 233
Query: 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+++++ R E C + V+ + +EC E P +R K+I TRL
Sbjct: 234 --EVIEMI------RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-23
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 28/262 (10%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V+ + + ++VA+K+ + + F E +VM + H N++++ C+
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCT- 69
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833
+ +F + EYM +G L YL L L++ DV A+EYL S IH
Sbjct: 70 -KQRPIF--IVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIH 123
Query: 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNG 893
DL N L+G++ V +SDFG+ + + +DQ+ + T + + E R S+
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGLARYVL-DDQYTSSQGTKFPVKWAPPEVFDYSRFSSKS 182
Query: 894 DVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAK 953
DV++FGV++ E F+ K E F+ ++ + G L R
Sbjct: 183 DVWSFGVLMWEVFSEGKMPYERFSNSEVVES------------VSAGYRLYR-------P 223
Query: 954 EQCMSFVFNMAMECTVESPEKR 975
+ + V+ + C E PE R
Sbjct: 224 KLAPTEVYTIMYSCWHEKPEDR 245
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 99.3 bits (247), Expect = 4e-23
Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
IG G FG V+ + +VA+K ++ + + F E +VM + H ++++ C
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGVC-- 68
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833
+ L E+M HG L YL + L + +DV + YL S+ VIH
Sbjct: 69 --TERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIH 123
Query: 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNG 893
DL N L+G+N V +SDFG+T+ + +DQ+ + T T + + + E S + S+
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVL-DDQYTSSTGTKFPVKWSSPEVFSFSKYSSKS 182
Query: 894 DVYNFGVMLMETFT-GKKP 911
DV++FGV++ E F+ GK P
Sbjct: 183 DVWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 99.3 bits (247), Expect = 4e-23
Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 46/283 (16%)
Query: 713 LIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFK-SFDVECEVMKSIRHRNIIKIISCC 771
L+G+G FG V+K ++D VAVK + + K F E ++K H NI+K+I C
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ + ++ + +E +P G +L L Q + +D A+ + YL S
Sbjct: 62 T--QRQPIY--IVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYL---ESKNC 114
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT----QTPATIGYMALEYGSEG 887
IH DL N L+G+N V +SDFG+++ +ED + + Q P I + A E + G
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSR---QEDDGIYSSSGLKQIP--IKWTAPEALNYG 169
Query: 888 RVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946
R S+ DV+++G++L ETF+ G P GMT + +RE
Sbjct: 170 RYSSESDVWSYGILLWETFSLGVCPY-----PGMTNQQ-------------------ARE 205
Query: 947 DIQ----FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
++ ++C V+ + C PE R E+ L
Sbjct: 206 QVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 98.6 bits (245), Expect = 2e-22
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 46/291 (15%)
Query: 714 IGRGGFGSVYKARI------QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG V+ A QD + VAVK A K F E E++ +++H +I+K
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN------------YILDIFQRLNIMID 815
C GD L + EYM HG L K+L + L Q L+I
Sbjct: 73 YGVCVEGD--PLI--MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQ 128
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875
+A+ + YL S +H DL N L+G+N++ + DFG+++ + D + T
Sbjct: 129 IAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 185
Query: 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISI 934
I +M E + +T DV++ GV+L E FT GK+P ++ N + I
Sbjct: 186 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-------------I 232
Query: 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
I G +L R C V+++ + C P R+N KEI + L
Sbjct: 233 ECITQGRVLQR-------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLL 276
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 97.2 bits (243), Expect = 3e-22
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFN------QQCGRAFKSFDVECEVMKSIRHRNI 764
IG+G FG VY R DG +K + ++ A E +++K + H NI
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALN----EVKILKKLNHPNI 61
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIF---QRLNIMIDVASALE 821
IK S + L + +EY G L + + F Q L+ + + AL+
Sbjct: 62 IKYYE--SFEEKGKLC--IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALK 117
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ--TPATIGYM 879
YL+ S ++H D+KP N+ L N + L DFGI+K+L+ + +T TP Y+
Sbjct: 118 YLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLS-STVDLAKTVVGTPY---YL 170
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ E + D+++ G +L E T K P
Sbjct: 171 SPELCQNKPYNYKSDIWSLGCVLYELCTLKHP 202
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 8e-22
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 37/290 (12%)
Query: 713 LIGRGGFGSVYKARI--QDG--MEVAVKVF--NQQCGRAFKSFDVECEVMKSIRHRNIIK 766
++G G FGSV + ++ DG ++VAVK + + F E MK H N++K
Sbjct: 6 ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMK 65
Query: 767 IISCCSIGDFKALFKA--LALEYMPHGSLEKYLYSSN-----YILDIFQRLNIMIDVASA 819
+I C + L +M HG L +L S L + L M+D+A
Sbjct: 66 LIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYM 879
+EYL + IH DL N +L ++M ++DFG++K + D + + ++
Sbjct: 126 MEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 182
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938
A+E ++ ++ DV+ FGV + E T G+ P + N H + D+L
Sbjct: 183 AIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN------HEIYDYLR------- 229
Query: 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
G+ L + E C+ ++++ C P+ R ++ L I
Sbjct: 230 HGNRLKQ-------PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 1e-21
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 714 IGRGGFGSVYKAR-IQDG----MEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKI 767
+G G FG+VYK I +G + VA+KV ++ A K E VM S+ H +++++
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 768 ISCCSIGDFKALFKALAL--EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
+ C L + L + MP G L Y+ + + LN + +A + YL
Sbjct: 75 LGIC-------LSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE- 126
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS 885
++H DL NVL+ ++DFG+ KLL +++ I +MALE
Sbjct: 127 --EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL 184
Query: 886 EGRVSTNGDVYNFGVMLMETFT-GKKP 911
+ DV+++GV + E T G KP
Sbjct: 185 HRIYTHKSDVWSYGVTVWELMTFGAKP 211
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 98.3 bits (243), Expect = 1e-21
Identities = 77/289 (26%), Positives = 120/289 (41%), Gaps = 31/289 (10%)
Query: 713 LIGRGGFGSVYKARIQDGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRH-RNIIKII 768
+G G FG VY AR D VA+KV ++ + + F E +++ S+ H NI+K+
Sbjct: 7 KLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLY 64
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYL--YSSNYILDIFQRLNIMIDVASALEYLYFG 826
L +EY+ GSLE L L + L I+ + SALEYL+
Sbjct: 65 DFFQDEGSLYLV----MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH-- 118
Query: 827 YSTPVIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTREDQFVTQTQTPA----TIGYMAL 881
S +IH D+KP N+LL D V L DFG+ KLL + P+ T GYMA
Sbjct: 119 -SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177
Query: 882 EY---GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938
E S S++ D+++ G+ L E TG P N T + L +
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237
Query: 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+ + + + + P+ R+++ ++ L
Sbjct: 238 P----LSPSNPELISKAASDLL----KKLLAKDPKNRLSSSSDLSHDLL 278
|
Length = 384 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 4e-21
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 708 FSENNLI-----GRGGFGSVYKAR---IQD--GMEVAVKVFNQQCGRAFKSFDVECEVMK 757
F E +L G+G FGSV R +QD G VAVK + F+ E E++K
Sbjct: 1 FEERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILK 60
Query: 758 SIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVA 817
S++H NI+K C + L L +EY+P+GSL YL LD + L +
Sbjct: 61 SLQHDNIVKYKGVCYSAGRRNL--RLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQIC 118
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT---QTPA 874
+EYL S +H DL N+L+ + DFG+TK+L ++ ++ ++P
Sbjct: 119 KGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESP- 174
Query: 875 TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT 907
I + A E +E + S DV++FGV+L E FT
Sbjct: 175 -IFWYAPESLTESKFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 4e-21
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 16/210 (7%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V++ + VAVK K F E ++MK +RH +I++ + C++
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDP-KDFLAEAQIMKKLRHPKLIQLYAVCTL 72
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+ ++ + E M +GSL +YL L + Q +++ VAS + YL + I
Sbjct: 73 EE--PIY--IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYI 125
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H DL NVL+G+N + ++DFG+ +++ +ED + + I + A E R S
Sbjct: 126 HRDLAARNVLVGENNICKVADFGLARVI-KEDIYEAREGAKFPIKWTAPEAALYNRFSIK 184
Query: 893 GDVYNFGVMLMETFT-GKKPTNEIFNEGMT 921
DV++FG++L E T G+ P GMT
Sbjct: 185 SDVWSFGILLTEIVTYGRMPY-----PGMT 209
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 93.5 bits (232), Expect = 5e-21
Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVK-VFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG+G FG V + G +VAVK + N +AF + E VM +RH N+++++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLA---EASVMTQLRHSNLVQLLGVI- 68
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYS-SNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ + L+ + EYM GSL YL S +L L +DV A+EYL +
Sbjct: 69 VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNF 123
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVST 891
+H DL NVL+ ++ VA +SDFG+TK + TQ + + A E E + ST
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFST 178
Query: 892 NGDVYNFGVMLMETFT-GKKPTNEI 915
DV++FG++L E ++ G+ P I
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRI 203
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 93.4 bits (233), Expect = 5e-21
Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVEC---E--VMKSIRHRNIIKI 767
+G+G FG V R +D G A+KV ++ + K +VE E ++ I H I+K+
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKK--KIIKRKEVEHTLTERNILSRINHPFIVKL 58
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ + L+ L LEY P G L +L + R ++ ALEYL+
Sbjct: 59 H--YAFQTEEKLY--LVLEYAPGGELFSHLSKEGRFSEERARF-YAAEIVLALEYLH--- 110
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA-TIGYMALEYGSE 886
S +I+ DLKP N+LL + L+DFG+ K L+ E +T T T Y+A E
Sbjct: 111 SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS---RTNTFCGTPEYLAPEVLLG 167
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFN 917
D ++ GV+L E TGK P EI+
Sbjct: 168 KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYE 203
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 5e-21
Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 51/300 (17%)
Query: 713 LIGRGGFGSVYKARIQD------GMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNI 764
+G G FG V KA VAVK+ + E E+MK I +H+NI
Sbjct: 19 PLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 78
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYL---------YSSNYILDIFQRL----- 810
I ++ C+ L+ + +EY HG+L +L S + + L
Sbjct: 79 INLLGVCTQEG--PLY--VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDL 134
Query: 811 -NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869
+ VA +E+L S IH DL NVL+ ++ V ++DFG+ + + D +
Sbjct: 135 VSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKT 191
Query: 870 TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVND 928
T + +MA E + + DV++FGV+L E FT G P
Sbjct: 192 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP----------------- 234
Query: 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ I + ++ L +E + + C ++++ +C E P +R K++V L ++
Sbjct: 235 YPGIPVEELFK---LLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 1e-20
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 39/286 (13%)
Query: 711 NNLIGRGGFGSVYKA----RIQDGMEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNII 765
IG G FG VY+ + + VAVK + + F E +M+ H +I+
Sbjct: 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
K+I + + +E P G L YL + Y LD+ + +++AL YL
Sbjct: 71 KLIGVITENPV-----WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE- 124
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS 885
S +H D+ NVL+ L DFG+++ L ++ + ++ I +MA E +
Sbjct: 125 --SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL-EDESYYKASKGKLPIKWMAPESIN 181
Query: 886 EGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWV--NDWLLISIMKIVDGSL 942
R ++ DV+ FGV + E G KP V ND I +I +G
Sbjct: 182 FRRFTSASDVWMFGVCMWEILMLGVKPF-----------QGVKNND----VIGRIENGER 226
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
L C ++++ +C P KR E+ +L I
Sbjct: 227 LPM-------PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 93.5 bits (232), Expect = 1e-20
Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 30/213 (14%)
Query: 712 NLIGRGGFGSVYKARI-QDG--MEVAVKVFNQQCGRA-FKSFDVECEVMKSI-RHRNIIK 766
++IG G FG V KARI +DG M+ A+K + + + F E EV+ + H NII
Sbjct: 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 72
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI---------------LDIFQRLN 811
++ C + L+ LA+EY PHG+L +L S + L Q L+
Sbjct: 73 LLGACEHRGY--LY--LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 128
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
DVA ++YL IH DL N+L+G+N VA ++DFG+++ ++ +V +T
Sbjct: 129 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTM 182
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLME 904
+ +MA+E + +TN DV+++GV+L E
Sbjct: 183 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 215
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 3e-20
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 712 NLIGRGGFGSVYKA-RIQDGMEVAVK--VFNQQCGRAFKSFDVECEVMKSIRHRNIIKII 768
+LIGRG FG VYK ++ G VA+K + A KS E +++K+++H NI+K I
Sbjct: 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYI 65
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLN------IMIDVASALEY 822
D + LEY +GSL + I+ F + V L Y
Sbjct: 66 GSIETSDSLYII----LEYAENGSLRQ-------IIKKFGPFPESLVAVYVYQVLQGLAY 114
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI-TKLLTREDQFVTQTQTPATIGYMAL 881
L+ VIH D+K +N+L + V L+DFG+ TKL + TP +MA
Sbjct: 115 LH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPY---WMAP 168
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
E ST D+++ G ++E TG P
Sbjct: 169 EVIEMSGASTASDIWSLGCTVIELLTGNPP 198
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 91.1 bits (226), Expect = 3e-20
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 700 ELCQATDGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKS 758
E+ + TD ++ L G G +G VY+ + + VAVK + + F E VMK
Sbjct: 2 EMER-TDITMKHKL-GGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKE 58
Query: 759 IRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVA 817
I+H N+++++ C+ + F + E+M +G+L YL N ++ L + ++
Sbjct: 59 IKHPNLVQLLGVCTR---EPPFYIIT-EFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 114
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
SA+EYL IH DL N L+G+N + ++DFG+++L+T D + I
Sbjct: 115 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 170
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFT 907
+ A E + + S DV+ FGV+L E T
Sbjct: 171 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 7e-20
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 30/213 (14%)
Query: 712 NLIGRGGFGSVYKARIQ-DG--MEVAVKVFNQQCGRA-FKSFDVECEVM-KSIRHRNIIK 766
++IG G FG V +A I+ DG M A+K+ + + F E EV+ K H NII
Sbjct: 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIIN 67
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI---------------LDIFQRLN 811
++ C + +A+EY P+G+L +L S + L Q L
Sbjct: 68 LLGACE----NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQ 123
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
DVA+ ++YL IH DL NVL+G+N+ + ++DFG+++ E+ +V +T
Sbjct: 124 FASDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSR---GEEVYVKKTM 177
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLME 904
+ +MA+E + +T DV++FGV+L E
Sbjct: 178 GRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWE 210
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 90.3 bits (224), Expect = 1e-19
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 714 IGRGGFGSV----YKARIQD-GMEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIKI 767
+G G FG V Y G VAVK ++CG+ S + E ++K++ H NI+K
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
CCS K L L +EY+P GSL YL L++ Q L + + YL +
Sbjct: 72 KGCCSEQGGKGL--QLIMEYVPLGSLRDYLPKHK--LNLAQLLLFAQQICEGMAYL---H 124
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL-TREDQFVTQTQTPATIGYMALEYGSE 886
S IH DL NVLL ++ + + DFG+ K + + + + + + + A+E E
Sbjct: 125 SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE 184
Query: 887 GRVSTNGDVYNFGVMLMETFT 907
+ S DV++FGV L E T
Sbjct: 185 NKFSYASDVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 89.2 bits (221), Expect = 2e-19
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 22/229 (9%)
Query: 708 FSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRH 761
F+ ++G+G FGSV +A+++ +VAVK+ + F E MK H
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60
Query: 762 RNIIKII--SCCSIGDFKALFKALALEYMPHGSLEKYLYSSN-----YILDIFQRLNIMI 814
N+IK+I S S + + L +M HG L +L S + L + + MI
Sbjct: 61 PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMI 120
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
D+AS +EYL S IH DL N +L +NM ++DFG++K + D + +
Sbjct: 121 DIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKL 177
Query: 875 TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP-----TNEIFN 917
+ ++ALE ++ +T+ DV+ FGV + E T G+ P +EI+N
Sbjct: 178 PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYN 226
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 3e-19
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 29/209 (13%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAF-KSFDVECEVMKSIRHRNIIKIISCC 771
+G+G G VYK R G A+K + F K E + ++S ++K C
Sbjct: 9 LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVK----C 64
Query: 772 SIGDFKALFK----ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ A +K ++ LEYM GSL L I + I + L+YL+
Sbjct: 65 ----YGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAY-IARQILKGLDYLH--T 117
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA-----TIGYMALE 882
+IH D+KPSN+L+ ++DFGI+K+L T T+ YM+ E
Sbjct: 118 KRHIIHRDIKPSNLLINSKGEVKIADFGISKVL-------ENTLDQCNTFVGTVTYMSPE 170
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
S D+++ G+ L+E GK P
Sbjct: 171 RIQGESYSYAADIWSLGLTLLECALGKFP 199
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 3e-19
Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 56/297 (18%)
Query: 714 IGRGGFGSVYKARI------QDGMEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIK 766
IG+G FG V++AR + VAVK+ ++ ++ F E +M H NI+K
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYL--------------------YSSNYI-LD 805
++ C++G K + L EYM +G L ++L N + L
Sbjct: 73 LLGVCAVG--KPM--CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLS 128
Query: 806 IFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865
++L I VA+ + YL +H DL N L+G+NMV ++DFG+++ + D
Sbjct: 129 CTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 185
Query: 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKH 924
+ I +M E R +T DV+ +GV+L E F+ G +P + +E +
Sbjct: 186 YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV---- 241
Query: 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
I + DG++LS + C ++N+ C + P R + I
Sbjct: 242 ---------IYYVRDGNVLS-------CPDNCPLELYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 3e-19
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 26/217 (11%)
Query: 699 LELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKS 758
L L + T G +IG G FG+V + G +VAVK N +C ++F E VM
Sbjct: 3 LNLQKLTLG----EIIGEGEFGAVLQGEYT-GQKVAVK--NIKCDVTAQAFLEETAVMTK 55
Query: 759 IRHRNIIKIISCCSIGDFKALFKAL--ALEYMPHGSLEKYLYS-SNYILDIFQRLNIMID 815
+ H+N+++++ L L +E M G+L +L + ++ + Q L +D
Sbjct: 56 LHHKNLVRLLGVI-------LHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLD 108
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875
VA +EYL S ++H DL N+L+ ++ VA +SDFG+ ++ V ++ P
Sbjct: 109 VAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARV---GSMGVDNSKLP-- 160
Query: 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
+ + A E + S+ DV+++GV+L E F+ G+ P
Sbjct: 161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAP 197
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 87.7 bits (217), Expect = 6e-19
Identities = 70/288 (24%), Positives = 135/288 (46%), Gaps = 36/288 (12%)
Query: 709 SENNLIGRGGFGSVYKA--RIQDGMEVAVKVFNQQCGRAFKS---FDVECEVMKSIRHRN 763
++ +IG G FG V++ ++ EVAV + + G K F E +M H N
Sbjct: 8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN 67
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
II++ + FK + EYM +G+L+KYL + +Q + ++ +A+ ++YL
Sbjct: 68 IIRLEGVVT--KFKPAM--IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL 123
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG--YMAL 881
+H DL N+L+ N+ +SDFG++++L +D T T + I + A
Sbjct: 124 S---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVL-EDDPEGTYTTSGGKIPIRWTAP 179
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940
E + + ++ DV++FG+++ E + G++P ++ N +MK ++
Sbjct: 180 EAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--------------EVMKAIN- 224
Query: 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ + A C S V+ + ++C + +R +IV L K+
Sbjct: 225 -----DGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 86.2 bits (213), Expect = 2e-18
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 46/275 (16%)
Query: 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIKIISCC 771
IGRG FG V+ R++ D VAVK + K+ F E ++K H NI+++I C
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ + ++ + +E + G +L + L + + + ++ + A+ +EYL S
Sbjct: 63 T--QKQPIY--IVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHC 115
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT----QTPATIGYMALEYGSEG 887
IH DL N L+ + V +SDFG+++ ED T Q P + + A E + G
Sbjct: 116 IHRDLAARNCLVTEKNVLKISDFGMSR--EEEDGVYASTGGMKQIP--VKWTAPEALNYG 171
Query: 888 RVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946
R S+ DV++FG++L E F+ G P + N+ +RE
Sbjct: 172 RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ------------------------TRE 207
Query: 947 DIQ----FVAKEQCMSFVFNMAMECTVESPEKRIN 977
I+ E C V+ + C P +R +
Sbjct: 208 AIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 2e-18
Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 44/265 (16%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDV--ECEVM-KSIRHRNIIKI 767
+IG G F +V A+ + E A+K+ + +Q + K V E EV+ + H IIK+
Sbjct: 8 IIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKL 67
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ D + L+ LEY P+G L +Y+ LD ++ ALEYL+
Sbjct: 68 Y--YTFQDEENLY--FVLEYAPNGELLQYI-RKYGSLDEKCTRFYAAEILLALEYLH--- 119
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---------- 877
S +IH DLKP N+LL +M ++DFG K+L + I
Sbjct: 120 SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRF 179
Query: 878 --------YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929
Y++ E +E + D++ G ++ + TGK P F N++
Sbjct: 180 ASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP----FRGS-------NEY 228
Query: 930 LLISIMKIVDGSLLSREDIQFVAKE 954
L KI+ + AK+
Sbjct: 229 LTFQ--KILKLEYSFPPNFPPDAKD 251
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 4e-18
Identities = 55/206 (26%), Positives = 107/206 (51%), Gaps = 12/206 (5%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G+G FG V+ VA+K + + ++F E +VMK +RH ++++ + S
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 72
Query: 774 GDFKALFKALALEYMPHGSLEKYLY-SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+ ++ + EYM GSL +L L + Q +++ +AS + Y+ +
Sbjct: 73 ---EPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 124
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H DL+ +N+L+G+N+V ++DFG+ +L+ ++++ + I + A E GR +
Sbjct: 125 HRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 183
Query: 893 GDVYNFGVMLMETFT-GKKPTNEIFN 917
DV++FG++L E T G+ P + N
Sbjct: 184 SDVWSFGILLTELTTKGRVPYPGMVN 209
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 85.0 bits (210), Expect = 6e-18
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 713 LIGRGGFGSVYKA-RIQDG----MEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIK 766
L+G G FG+V+K I +G + VA+K + GR F+ M S+ H I++
Sbjct: 14 LLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVR 73
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
++ C + L + P GSL ++ LD + LN + +A + YL
Sbjct: 74 LLGICPGASLQ-----LVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE-- 126
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ--FVTQTQTPATIGYMALEYG 884
++H +L N+LL + + ++DFG+ LL +D+ F ++ +TP I +MALE
Sbjct: 127 -EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTP--IKWMALESI 183
Query: 885 SEGRVSTNGDVYNFGVMLMETFT-GKKP 911
GR + DV+++GV + E + G +P
Sbjct: 184 LFGRYTHQSDVWSYGVTVWEMMSYGAEP 211
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 84.4 bits (208), Expect = 8e-18
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 30/213 (14%)
Query: 712 NLIGRGGFGSVYKARIQ-DG--MEVAVKVFNQQCGRA-FKSFDVECEVM-KSIRHRNIIK 766
++IG G FG V KARI+ DG M+ A+K + + + F E EV+ K H NII
Sbjct: 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 60
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI---------------LDIFQRLN 811
++ C + LA+EY PHG+L +L S + L Q L+
Sbjct: 61 LLGACE----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 116
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
DVA ++YL IH DL N+L+G+N VA ++DFG+++ ++ +V +T
Sbjct: 117 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTM 170
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLME 904
+ +MA+E + +TN DV+++GV+L E
Sbjct: 171 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 203
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 83.8 bits (207), Expect = 1e-17
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V + + +VA+K+ ++ + F E +VM + H ++++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCT- 69
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833
K + EYM +G L YL Q L + DV + YL S IH
Sbjct: 70 ---KQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIH 123
Query: 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNG 893
DL N L+ D +SDFG+++ + +D++ + + + + E + S+
Sbjct: 124 RDLAARNCLVDDQGCVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLLYSKFSSKS 182
Query: 894 DVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVA 952
DV+ FGV++ E ++ GK P E FN T++ + G L R + A
Sbjct: 183 DVWAFGVLMWEVYSLGKMPY-ERFNNSETVEK------------VSQGLRLYRPHL---A 226
Query: 953 KEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986
E+ V+ + C E E+R +++++ +
Sbjct: 227 SEK----VYAIMYSCWHEKAEERPTFQQLLSSIE 256
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 1e-17
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 21/231 (9%)
Query: 708 FSENN---LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN 763
+ EN ++G+G +G VY AR + + +A+K ++ R + E + ++HRN
Sbjct: 7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN 66
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
I++ + S F +F +E +P GSL L S L ++ I+ LE L
Sbjct: 67 IVQYLGSDSENGFFKIF----MEQVPGGSLSALLRSKWGPLKDNEQ-TIIFYTKQILEGL 121
Query: 824 YFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
+ + ++H D+K NVL+ + V +SDFG +K L + T+T T T+ YMA E
Sbjct: 122 KYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP-CTETFT-GTLQYMAPE 179
Query: 883 YGSEGR--VSTNGDVYNFGVMLMETFTGKKPTNEI-------FNEGMTLKH 924
+G D+++ G ++E TGK P E+ F GM H
Sbjct: 180 VIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH 230
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 83.5 bits (206), Expect = 2e-17
Identities = 73/295 (24%), Positives = 131/295 (44%), Gaps = 50/295 (16%)
Query: 714 IGRGGFGSVYKARIQ-DGME----VAVKVFNQ-QCGRAFKSFDVECEVMKSIRHRNIIKI 767
+G FG +YK + GM+ VA+K + + F E +M + H NI+ +
Sbjct: 13 LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCL 72
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLY----------SSN------YILDIFQRLN 811
+ + + + EY+ G L ++L SS+ LD L+
Sbjct: 73 LGVVT----QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH 128
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
I I +A+ +EYL S +H DL N+L+G+ + +SD G+++ + D + Q +
Sbjct: 129 IAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930
+ I +M E G+ S++ D+++FGV+L E F+ G +P N+
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ------------ 233
Query: 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
++++V R+ E C ++++ EC E P +R K+I TRL
Sbjct: 234 --EVIEMV------RKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 3e-17
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 712 NLIGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGR--AFKSFDVECEVMKSIRHRNIIKII 768
N IG G FG VY A + G +AVK Q K E +V++ ++H N++K
Sbjct: 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD--IFQRLNIMIDVASALEYLYFG 826
+ K + +EY G+LE+ L ILD + + + + L YL+
Sbjct: 66 GV-EVHREKVY---IFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQL--LEGLAYLH-- 116
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE-----DQFVTQTQTPATIGYMAL 881
S ++H D+KP+N+ L N V L DFG L ++ + TPA YMA
Sbjct: 117 -SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPA---YMAP 172
Query: 882 EYGSEGRVSTNG---DVYNFGVMLMETFTGKKPTNEIFNE 918
E + G+ +G D+++ G +++E TGK+P +E+ NE
Sbjct: 173 EVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE 212
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 3e-17
Identities = 78/290 (26%), Positives = 120/290 (41%), Gaps = 58/290 (20%)
Query: 714 IGRGGFGSVYKA--RIQDG--MEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIKII 768
+G G FGSV K ++ G +EVAVK Q+ A K F E VM + H I+++I
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYL--YSSNYILDIFQRLNIMIDVASALEYLYFG 826
C K L +E P G L KYL + D+ + VA + YL
Sbjct: 63 GVC-----KGEPLMLVMELAPLGPLLKYLKKRREIPVSDL---KELAHQVAMGMAYLE-- 112
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ---------TPATIG 877
S +H DL NVLL + A +SDFG+++ L + T P I
Sbjct: 113 -SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECIN 171
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
Y G+ S+ DV+++GV L E F+ G KP E+ ++
Sbjct: 172 Y--------GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--------------EVIA 209
Query: 937 IVD-GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+++ G L R + +C ++++ + C PE R E+ +
Sbjct: 210 MLESGERLPRPE-------ECPQEIYSIMLSCWKYRPEDRPTFSELESTF 252
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 81.6 bits (201), Expect = 7e-17
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 714 IGRGGFGSVYKARI-QDG--MEVAVKVFNQQ-CGRA-FKSFDVECEVMKSIRHRNIIKII 768
+G G FGSV + ++ QD ++VAVK C R+ + F E MK H N++++I
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66
Query: 769 SCCSIGDFKALFKA--LALEYMPHGSLEKYLYSSNY-----ILDIFQRLNIMIDVASALE 821
C + + + L +M HG L +L S L + M D+AS +E
Sbjct: 67 GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
YL S IH DL N +L +NM ++DFG++K + D + + ++A+
Sbjct: 127 YLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
E ++ +T DV++FGV + E T G+ P
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 8e-17
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVFN-QQCGRAFKSFDV-ECEVMKSIRHRNIIK---- 766
IG+G FG+V K R DG + K + K V E +++ ++H NI++
Sbjct: 8 IGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDR 67
Query: 767 -----------IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMID 815
++ C GD L + E +E+ +I I +L
Sbjct: 68 IIDRSNQTLYIVMEYCEGGDLAQLIQKCKKE---RKYIEE-----EFIWRILTQL----- 114
Query: 816 VASALEYLYFGY--STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV-TQTQT 872
AL + V+H DLKP+N+ L N L DFG+ K+L + F T T
Sbjct: 115 -LLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGT 173
Query: 873 PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
P YM+ E + D+++ G ++ E P
Sbjct: 174 PY---YMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPP 209
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 1e-16
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 712 NLIGRGGFGSVYKA--RIQDG----MEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNI 764
+G G FG VY+ R +DG ++VAVK + C +S F +E +M H+NI
Sbjct: 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN------YILDIFQRLNIMIDVAS 818
+++I F+ L + + LE M G L+ +L + L + L DVA
Sbjct: 72 VRLIGVS----FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAK 127
Query: 819 ALEYL-YFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
+YL + IH D+ N LL G VA ++DFG+ + + R + +
Sbjct: 128 GCKYLEENHF----IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAML 183
Query: 875 TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT 907
I +M E +G ++ DV++FGV+L E F+
Sbjct: 184 PIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 1e-16
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 24/206 (11%)
Query: 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRA-FKSFDVECEVMKSIRHRNIIKIISCC 771
+G G G V K + G +AVK + A K E +++ I+
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGF---- 64
Query: 772 SIGDFKALFK----ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ A + ++ +EYM GSL+K L + I + V L YL+ +
Sbjct: 65 ----YGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH 120
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE--DQFVTQTQTPATIGYMALEYGS 885
+IH D+KPSN+L+ L DFG++ L FV T YMA E
Sbjct: 121 K--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV------GTSSYMAPERIQ 172
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKP 911
S D+++ G+ L+E TG+ P
Sbjct: 173 GNDYSVKSDIWSLGLSLIELATGRFP 198
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.9 bits (200), Expect = 1e-16
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 46/291 (15%)
Query: 714 IGRGGFGSVYK---ARIQDG---MEVAVK-VFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
+G+G FG VY+ + G VA+K V R F E VMK ++++
Sbjct: 14 LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYS--------SNY-ILDIFQRLNIMIDVA 817
++ S G L + +E M G L+ YL S + + + + ++A
Sbjct: 74 LLGVVSTGQ-PTL---VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIA 129
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
+ YL + +H DL N ++ +++ + DFG+T+ + D + + +
Sbjct: 130 DGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
+MA E +G +T DV++FGV+L E T ++P + NE ++K
Sbjct: 187 WMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--------------EVLK 232
Query: 937 -IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986
++DG L E C + + C +P+ R EIV+ L
Sbjct: 233 FVIDGGHLDL-------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 2e-16
Identities = 56/169 (33%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 500 LNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSI 559
L L + L G +P +I L+ L I+ S N+ G IP ++G I L+ L L YN GSI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 560 PDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAE 619
P+S G L SL+ LNL+ N+LSG +P + L G + SF
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAA----------------LGGRLLHRASF------ 520
Query: 620 SFEGNKLLCGSPNLHVPPCKTSIQHTRRKNTILLGIFLPLSTIFMIAVI 668
+F N LCG P L C + + +GI +S F+ VI
Sbjct: 521 NFTDNAGLCGIPGLR--ACGPHLSVGAK-----IGIAFGVSVAFLFLVI 562
|
Length = 623 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 2e-16
Identities = 68/283 (24%), Positives = 129/283 (45%), Gaps = 37/283 (13%)
Query: 711 NNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNII 765
+IG G FG V + R++ ++VA+K + F E +M H NII
Sbjct: 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY- 824
++ + K+ + EYM +GSL+K+L ++ + Q + ++ +AS ++YL
Sbjct: 69 RLEGVVT----KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSE 124
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG 884
Y +H DL N+L+ N+V +SDFG+++ L + T I + A E
Sbjct: 125 MNY----VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAI 180
Query: 885 SEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK-IVDGSL 942
+ + ++ DV++FG+++ E + G++P +W D ++K + DG
Sbjct: 181 AYRKFTSASDVWSFGIVMWEVMSYGERP------------YW--DMSNQDVIKAVEDGYR 226
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
L C S ++ + ++C + +R +IV+ L
Sbjct: 227 LP-------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 79.5 bits (196), Expect = 2e-16
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V+ + + ++VA+K N+ + + F E +VM + H ++++ C+
Sbjct: 12 LGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCT- 69
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833
K L+ + E+M +G L YL L L++ DV +EYL IH
Sbjct: 70 -QQKPLY--IVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIH 123
Query: 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNG 893
DL N L+ V +SDFG+T+ + +D++ + + + + E + + S+
Sbjct: 124 RDLAARNCLVSSTGVVKVSDFGMTRYVL-DDEYTSSSGAKFPVKWSPPEVFNFSKYSSKS 182
Query: 894 DVYNFGVMLMETFT-GKKP 911
DV++FGV++ E FT GK P
Sbjct: 183 DVWSFGVLMWEVFTEGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 79.6 bits (196), Expect = 4e-16
Identities = 76/306 (24%), Positives = 133/306 (43%), Gaps = 58/306 (18%)
Query: 714 IGRGGFGSVYKA---RIQDG---MEVAVKVFNQQCGRA-FKSFDVECEVMKSIRHRNIIK 766
+G G FG V KA R++ VAVK+ + + + E ++K + H ++IK
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSS-----NYILDIFQRLNIMID------ 815
+ CS L L +EY +GSL +L S +Y+ R + +D
Sbjct: 68 LYGACSQDG--PLL--LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERA 123
Query: 816 ------------VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
++ ++YL ++H DL NVL+ + +SDFG+++ + E
Sbjct: 124 LTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE 180
Query: 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTL 922
D +V +++ + +MA+E + +T DV++FGV+L E T G P I E
Sbjct: 181 DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER--- 237
Query: 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
L +++K G + R E C ++N+ + C + P+KR +I
Sbjct: 238 --------LFNLLKT--GYRMER-------PENCSEEMYNLMLTCWKQEPDKRPTFADIS 280
Query: 983 TRLLKI 988
L K+
Sbjct: 281 KELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 79.7 bits (196), Expect = 5e-16
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 713 LIGRGGFGSVYKA-RIQDG----MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIK 766
++G G FG+VYK + +G + VA+K+ N+ G +A F E +M S+ H ++++
Sbjct: 14 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 73
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
++ C + L + MPHG L Y++ + LN + +A + YL
Sbjct: 74 LLGVCLSPTIQ-----LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE-- 126
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
++H DL NVL+ ++DFG+ +LL +++ I +MALE
Sbjct: 127 -ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 185
Query: 887 GRVSTNGDVYNFGVMLME--TFTGKK----PTNEI 915
+ + DV+++GV + E TF GK PT EI
Sbjct: 186 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 220
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 6e-16
Identities = 73/294 (24%), Positives = 110/294 (37%), Gaps = 57/294 (19%)
Query: 713 LIGRGGFGSVYKA--------RIQDGMEVAVKVF-NQQCGRAFKSFDVECEVMKSIRHRN 763
+G G FG V + I VAVK + + F E +M S+ H N
Sbjct: 2 KLGDGSFGVVRRGEWSTSGGKVIP----VAVKCLKSDKLSDIMDDFLKEAAIMHSLDHEN 57
Query: 764 IIKIISCCSIGDFKALFKALAL--EYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASAL 820
+I++ L L + E P GSL L I + + +A+ +
Sbjct: 58 LIRLYGV-------VLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGM 110
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK-LLTREDQFVTQTQTPATIGYM 879
YL S IH DL N+LL + + DFG+ + L ED +V + +
Sbjct: 111 RYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWC 167
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLIS---IM 935
A E S DV+ FGV L E FT G++P W +S I+
Sbjct: 168 APESLRTRTFSHASDVWMFGVTLWEMFTYGEEP-----------------WAGLSGSQIL 210
Query: 936 KIVD--GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
K +D G L R E C ++N+ ++C +P R + L +
Sbjct: 211 KKIDKEGERLER-------PEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 7e-16
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 712 NLIGRGGFGSVYKARIQD-------GMEVAVKVFNQ-QCGRAFKSFDVECEVMKSIRHRN 763
N +G G FG VY+ D + VAVK + + K F E +M + H N
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY------ILDIFQRLNIMIDVA 817
I+K++ C + + + + +E M G L YL + +L + + L+I +DVA
Sbjct: 61 IVKLLGVCLLNEPQYII----MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVA 116
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGD-----NMVAHLSDFGITKLLTREDQFVTQTQT 872
YL IH DL N L+ + + V + DFG+ + + + D + + +
Sbjct: 117 KGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEG 173
Query: 873 PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
+ +MA E +G+ +T DV++FGV++ E T G++P
Sbjct: 174 LLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 7e-16
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V+ +VAVK + + +SF E ++MK +RH ++++ + S
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS- 71
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+ ++ + EYM GSL +L L + +++ VA+ + Y+ I
Sbjct: 72 --EEPIY--IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYI 124
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H DL+ +N+L+GD +V ++DFG+ +L+ ++++ + I + A E GR +
Sbjct: 125 HRDLRSANILVGDGLVCKIADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 183
Query: 893 GDVYNFGVMLMETFT-GKKP 911
DV++FG++L E T G+ P
Sbjct: 184 SDVWSFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 1e-15
Identities = 70/311 (22%), Positives = 126/311 (40%), Gaps = 49/311 (15%)
Query: 694 RRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG---RAFKSFD 750
+F + LC+A DG + + + + VAVKV + A + F
Sbjct: 16 GQFGEVHLCEA-DGLQDFSEKAFAENDNADAPVL-----VAVKVL--RPDASDNAREDFL 67
Query: 751 VECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLY--------SSNY 802
E +++ + NI +++ C++ + +EYM +G L ++L +
Sbjct: 68 KEVKILSRLSDPNIARLLGVCTVDPPLCMI----MEYMENGDLNQFLQKHVAETSGLACN 123
Query: 803 ILDIFQR--LNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860
+ L + +AS + YL S +H DL N L+G N ++DFG+++ L
Sbjct: 124 SKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNL 180
Query: 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT--GKKPTNEIFNE 918
D + Q + P I +MA E G+ +T DV+ FGV L E T ++P + ++
Sbjct: 181 YSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240
Query: 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQ---CMSFVFNMAMECTVESPEKR 975
V I + R+D + + + C ++ + +EC E R
Sbjct: 241 ------QV----------IENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDR 284
Query: 976 INAKEIVTRLL 986
+EI L
Sbjct: 285 PTFREIHLFLQ 295
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 1e-15
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 19/158 (12%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK---VFNQQCGRAFKSFDV----ECEVMKSIRHRNII 765
IG G +G VYKAR + G VA+K + N++ G F + E ++++ +RH NI+
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKIRMENEKEG-----FPITAIREIKLLQKLRHPNIV 61
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
++ + +++ + EYM H L L S Q M + L+YL+
Sbjct: 62 RLKEIVTSKGKGSIY--MVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH- 117
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
S ++H D+K SN+L+ ++ V L+DFG+ + T+
Sbjct: 118 --SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 1e-15
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 31/220 (14%)
Query: 707 GFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSFDV--ECEVMKSIRHRN 763
F +G+G +GSVYK R+ D A+K + + D E ++ S+ H N
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60
Query: 764 IIK-----IISC--CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQR---LNIM 813
II + C + +EY P G L K + + I
Sbjct: 61 IISYKEAFLDGNKLCIV-----------MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIF 109
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP 873
I + L+ L+ ++H DLK +N+LL N + + D GI+K+L + + TQ TP
Sbjct: 110 IQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKK-NMAKTQIGTP 165
Query: 874 ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTN 913
YMA E S D+++ G +L E T P
Sbjct: 166 H---YMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 77.4 bits (190), Expect = 2e-15
Identities = 53/206 (25%), Positives = 107/206 (51%), Gaps = 12/206 (5%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G+G FG V+ +VA+K ++F E ++MK +RH ++ + + S
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMP-EAFLQEAQIMKKLRHDKLVPLYAVVSE 72
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASAL-EYLYFGYSTPVI 832
+ ++ + E+M GSL +L + + +L ++D+A+ + + + + I
Sbjct: 73 ---EPIY--IVTEFMGKGSLLDFLKEGD---GKYLKLPQLVDMAAQIADGMAYIERMNYI 124
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H DL+ +N+L+GDN+V ++DFG+ +L+ ++++ + I + A E GR +
Sbjct: 125 HRDLRAANILVGDNLVCKIADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 183
Query: 893 GDVYNFGVMLMETFT-GKKPTNEIFN 917
DV++FG++L E T G+ P + N
Sbjct: 184 SDVWSFGILLTELVTKGRVPYPGMVN 209
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 3e-15
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG+G G+VY A + G EVA+K N Q + E VM+ +H NI+ +
Sbjct: 27 IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL 86
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+GD L+ + +EY+ GSL + + +D Q + + ALE+L+ S VI
Sbjct: 87 VGD--ELW--VVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQVI 137
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTRE-DQFVTQTQTPATIGYMALEYGSEGRVST 891
H D+K N+LLG + L+DFG +T E + T TP +MA E +
Sbjct: 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY---WMAPEVVTRKAYGP 194
Query: 892 NGDVYNFGVMLMETFTGKKP 911
D+++ G+M +E G+ P
Sbjct: 195 KVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 7e-15
Identities = 73/285 (25%), Positives = 118/285 (41%), Gaps = 41/285 (14%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
IG G VY A + + +VA+K + ++C + E + M H N++K
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK--YYT 66
Query: 772 SIGDFKALFKALALEYMPHGSLE---KYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
S L+ L + Y+ GSL K Y LD ++ +V LEYL+ S
Sbjct: 67 SFVVGDELW--LVMPYLSGGSLLDIMKSSYPRG-GLDEAIIATVLKEVLKGLEYLH---S 120
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL--TREDQFVTQTQTPATIGYMALEYGSE 886
IH D+K N+LLG++ ++DFG++ L + + T +MA E +
Sbjct: 121 NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQ 180
Query: 887 GRVSTNG-DVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG---SL 942
D+++FG+ +E TG P ++ +K +M + SL
Sbjct: 181 VHGYDFKADIWSFGITAIELATGAAPYSKYP----PMK---------VLMLTLQNDPPSL 227
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+ D + +K SF M C + P KR A+E LLK
Sbjct: 228 ETGADYKKYSK----SFR-KMISLCLQKDPSKRPTAEE----LLK 263
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 74.6 bits (183), Expect = 1e-14
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 713 LIGRGGFGSVYKARI--QDGMEVAVKVFNQQCG---RAFKSFDVECEVMKSIRHRNIIKI 767
+IG G FG V R+ E+ V + + G + + F E +M H NII +
Sbjct: 11 VIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHL 70
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY-FG 826
+ K+ + EYM +GSL+ +L + + Q + ++ +AS ++YL G
Sbjct: 71 EGVVT----KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG 126
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV-TQTQTPATIGYMALEYGS 885
Y +H DL N+L+ N+V +SDFG++++L + + T I + A E +
Sbjct: 127 Y----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 182
Query: 886 EGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944
+ ++ DV+++G+++ E + G++P E+ N+ ++K ++
Sbjct: 183 YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--------------DVIKAIE----- 223
Query: 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
E + A C + + + ++C + +R ++IV+ L K+
Sbjct: 224 -EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 75.1 bits (184), Expect = 2e-14
Identities = 70/252 (27%), Positives = 113/252 (44%), Gaps = 41/252 (16%)
Query: 686 DMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVY--------KARIQDGMEVAVKV 737
++P++ W FS D + +G G FG V K + ++ + VAVK+
Sbjct: 3 ELPEDPRWE-FS-------RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKM 54
Query: 738 FNQQCG-RAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEK 795
+ E E+MK I +H+NII ++ C+ L+ + +EY G+L +
Sbjct: 55 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLY--VIVEYASKGNLRE 110
Query: 796 YLYSS-----NYILDI---------FQRL-NIMIDVASALEYLYFGYSTPVIHCDLKPSN 840
YL + Y DI F+ L + VA +EYL S IH DL N
Sbjct: 111 YLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARN 167
Query: 841 VLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGV 900
VL+ +N V ++DFG+ + + D + T + +MA E + + DV++FGV
Sbjct: 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 227
Query: 901 MLMETFT-GKKP 911
++ E FT G P
Sbjct: 228 LMWEIFTLGGSP 239
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 75.0 bits (184), Expect = 2e-14
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 15/215 (6%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDG----MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRH 761
F + ++G G FG+VYK I +G + VA+K + +A K E VM S+ +
Sbjct: 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821
++ +++ C + L + MP G L Y+ + LN + +A +
Sbjct: 69 PHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 123
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
YL ++H DL NVL+ ++DFG+ KLL +++ I +MAL
Sbjct: 124 YLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMAL 180
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEI 915
E + DV+++GV + E T G KP + I
Sbjct: 181 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 215
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 3e-14
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 713 LIGRGGFGSVYKA-RIQDGMEVAVK------VFNQQCGRAFKSFDV---ECEVMKSIRHR 762
LIG G FGSVY G +AVK V R D E ++K ++H
Sbjct: 7 LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
NI++ + D +F LEY+P GS+ L + + R N + + L Y
Sbjct: 67 NIVQYLGSSLDADHLNIF----LEYVPGGSVAALLNNYGAFEETLVR-NFVRQILKGLNY 121
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED-QFVTQTQTPATIG---Y 878
L+ + +IH D+K +N+L+ + +SDFGI+K L T P+ G +
Sbjct: 122 LH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFW 178
Query: 879 MALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
MA E + + D+++ G +++E TGK P
Sbjct: 179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 3e-14
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 713 LIGRGGFGSVYKARIQD-GMEVAVKVF-----NQQCGRAFKSFDVECEVMKSIRHRNIIK 766
L+G+G FG VY D G E+AVK + + + + + E +++K+++H I++
Sbjct: 9 LLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQ 68
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
C + ++F +EYMP GS++ L + + + R + +EYL+
Sbjct: 69 YYGCLRDDETLSIF----MEYMPGGSVKDQLKAYGALTETVTR-KYTRQILEGVEYLH-- 121
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP-----ATIGYMAL 881
S ++H D+K +N+L L DFG +K L Q + + T T +M+
Sbjct: 122 -SNMIVHRDIKGANILRDSAGNVKLGDFGASKRL----QTICSSGTGMKSVTGTPYWMSP 176
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914
E S DV++ G ++E T K P E
Sbjct: 177 EVISGEGYGRKADVWSVGCTVVEMLTEKPPWAE 209
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 4e-14
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 37/286 (12%)
Query: 714 IGRGGFGSVYKARI-----QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG V R G +VAVK + G E E+++++ H NI+K
Sbjct: 12 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
C+ + L +E++P GSL++YL + +++ Q+L + + ++YL
Sbjct: 72 KGICTEDGGNGI--KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL---G 126
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL-TREDQFVTQTQTPATIGYMALEYGSE 886
S +H DL NVL+ + DFG+TK + T ++ + + + + + A E +
Sbjct: 127 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ 186
Query: 887 GRVSTNGDVYNFGVMLMETFT----GKKPTNEIF-----NEG-MTLKHWVNDWLLISIMK 936
+ DV++FGV L E T P G MT+ V
Sbjct: 187 SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR--------V 238
Query: 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
+ +G L R C V+ + +C P KR + ++
Sbjct: 239 LEEGKRLPRPP-------NCPEEVYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 73.4 bits (180), Expect = 6e-14
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 37/223 (16%)
Query: 714 IGRGGFGSVYKARIQDGME------------------VAVKVFNQQCGR-AFKSFDVECE 754
+G G FG V+ + GME VAVK+ + + A F E +
Sbjct: 13 LGEGQFGEVHLCEAE-GMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK 71
Query: 755 VMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYL---------YSSNYILD 805
+M ++ NII++++ C D + EYM +G L ++L ++ +
Sbjct: 72 IMSRLKDPNIIRLLAVCITSDPLCMIT----EYMENGDLNQFLSRHEPQEAAEKADVVTI 127
Query: 806 IFQRLNIM-IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864
+ L M +AS ++YL S +H DL N L+G N ++DFG+++ L D
Sbjct: 128 SYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGD 184
Query: 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT 907
+ Q + I +M+ E G+ +T DV+ FGV L E T
Sbjct: 185 YYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 6e-14
Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 714 IGRGGFGSV----YKARIQDGMEVAVKVFNQQCGRAFK-SFDVECEVMKSIRHRNIIKII 768
+G G FG V YK R + ++VA+KV + ++ + E E+M + + I+++I
Sbjct: 3 LGSGNFGCVKKGVYKMRKKQ-IDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
C + +AL L +E G L K+L + + + +M V+ ++YL
Sbjct: 62 GVC---EAEALM--LVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLE---G 113
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT-QTQTPATIGYMALEYGSEG 887
+H DL NVLL + A +SDFG++K L +D + ++ + + A E +
Sbjct: 114 KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFR 173
Query: 888 RVSTNGDVYNFGVMLMETFT-GKKP 911
+ S+ DV+++G+ + E F+ G+KP
Sbjct: 174 KFSSRSDVWSYGITMWEAFSYGQKP 198
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 6e-14
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 712 NLIGRGGFGSVYKARI--QDGMEV--AVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIK 766
+IG+G FG VY + DG ++ AVK N+ + F E +MK H N++
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
++ C + L + L YM HG L ++ S + + + + VA +EYL
Sbjct: 61 LLGICLPSEGSPL---VVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA-- 115
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT--IGYMALEYG 884
S +H DL N +L ++ ++DFG+ + + ++ + T A + +MALE
Sbjct: 116 -SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESL 174
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ +T DV++FGV+L E T P
Sbjct: 175 QTQKFTTKSDVWSFGVLLWELMTRGAP 201
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 8e-14
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 29/204 (14%)
Query: 713 LIGRGGFGSVYKA-RIQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
++GRG FG V+ R D V +K Q + EC+V+K + H NII+
Sbjct: 7 VVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYE 66
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY------- 822
+ + KAL + +EY P G+L +Y I +R N ++D + L +
Sbjct: 67 --NFLEDKAL--MIVMEYAPGGTLAEY---------IQKRCNSLLDEDTILHFFVQILLA 113
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
L+ ++ ++H DLK N+LL + MV + DFGI+K+L+ + + T TP Y++
Sbjct: 114 LHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPC---YISP 170
Query: 882 EYGSEGR-VSTNGDVYNFGVMLME 904
E EG+ + D++ G +L E
Sbjct: 171 EL-CEGKPYNQKSDIWALGCVLYE 193
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 9e-14
Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 62/237 (26%)
Query: 704 ATDGFSE---NNLIGRGGFGSVYKARIQ-DGMEVAVKVF---------NQQCGRAFKSFD 750
A SE N IG G G+VYK + G A+KV Q C
Sbjct: 69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICR------- 121
Query: 751 VECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLE-KYLYSSNYILDIFQR 809
E E+++ + H N++K C + D + L LE+M GSLE ++ ++ D+ ++
Sbjct: 122 -EIEILRDVNHPNVVK---CHDMFDHNGEIQVL-LEFMDGGSLEGTHIADEQFLADVARQ 176
Query: 810 LNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869
+ S + YL+ ++H D+KPSN+L+ ++DFG++++L Q
Sbjct: 177 ------ILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRIL-------AQ 220
Query: 870 TQTP-----ATIGYMALEYGSEGRVSTN----------GDVYNFGVMLMETFTGKKP 911
T P TI YM+ E R++T+ GD+++ GV ++E + G+ P
Sbjct: 221 TMDPCNSSVGTIAYMSPE-----RINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFP 272
|
Length = 353 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 1e-13
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 714 IGRGGFGSVY----KARIQDGME--VAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIK 766
+G+G FG VY K ++D E VA+K N+ R F E VMK ++++
Sbjct: 14 LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 73
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYS-----SNYILDIFQRLNIMI----DVA 817
++ S G + +E M G L+ YL S N + L MI ++A
Sbjct: 74 LLGVVSQGQPTLVI----MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIA 129
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
+ YL + +H DL N ++ ++ + DFG+T+ + D + + +
Sbjct: 130 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
+M+ E +G +T DV++FGV+L E T ++P +GM+ N+ +L +M
Sbjct: 187 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY-----QGMS-----NEQVLRFVM- 235
Query: 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+G LL + D C +F + C +P+ R + EI++ +
Sbjct: 236 --EGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 1e-13
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 707 GFSENNLIGRGGFGSVYKARIQDGMEV-AVKVFNQQ-C--GRAFKSFDVECEVMKSIRHR 762
F +IG+G FG V + +D ++ A+K N+Q C + ++ E +++ + H
Sbjct: 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
++ + S D + ++ L ++ + G L +Y S Q + ++ ALEY
Sbjct: 61 FLVNL--WYSFQDEENMY--LVVDLLLGGDL-RYHLSQKVKFSEEQVKFWICEIVLALEY 115
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
L+ S +IH D+KP N+LL + H++DF I +T + T T T GYMA E
Sbjct: 116 LH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL---TTSTSGTPGYMAPE 169
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
S D ++ GV E GK+P
Sbjct: 170 VLCRQGYSVAVDWWSLGVTAYECLRGKRP 198
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 72.4 bits (177), Expect = 1e-13
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG+G G+V+ A + G EVA+K N Q + E VMK +++ NI+ +
Sbjct: 27 IGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL 86
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+GD LF + +EY+ GSL + + +D Q + + ALE+L+ + VI
Sbjct: 87 VGD--ELF--VVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLH---ANQVI 137
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YMALEYGSEGRV 889
H D+K NVLLG + L+DFG +T E Q++ +G +MA E +
Sbjct: 138 HRDIKSDNVLLGMDGSVKLTDFGFCAQITPE-----QSKRSTMVGTPYWMAPEVVTRKAY 192
Query: 890 STNGDVYNFGVMLMETFTGKKP 911
D+++ G+M +E G+ P
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 1e-13
Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG G +G VYKAR I G VA+KV + G F+ E ++K RH NI+
Sbjct: 11 IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYF---- 66
Query: 773 IGDFKALFKA-LALEYMPHGSLEKYLYSSNYILDIFQRLN----------IMIDVASALE 821
G + K + +EY GSL+ DI+Q + + L
Sbjct: 67 -GSYLRRDKLWIVMEYCGGGSLQ----------DIYQVTRGPLSELQIAYVCRETLKGLA 115
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---Y 878
YL+ T IH D+K +N+LL ++ L+DFG++ LT T + + IG +
Sbjct: 116 YLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA-----TIAKRKSFIGTPYW 167
Query: 879 MALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKP 911
MA E + G D++ G+ +E + P
Sbjct: 168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPP 203
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 3e-13
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQ---QCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
I +G +G V+ A+ G A+KV + E +++ + ++K+
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY- 59
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
S K L+ L +EY+P G L L + LD + ++ ALEYL+ S
Sbjct: 60 -YSFQGKKNLY--LVMEYLPGGDLASLLENVGS-LDEDVARIYIAEIVLALEYLH---SN 112
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPA-----TIGYMALEY 883
+IH DLKP N+L+ N L+DFG++K+ L R + + T Y+A E
Sbjct: 113 GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPE- 171
Query: 884 GSEGRVSTNGDVYNF-------GVMLMETFTGKKPTN-----EIFN 917
G ++ G +L E G P + EIF
Sbjct: 172 ------VILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQ 211
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 3e-13
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 27/210 (12%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV-----ECEVMKSIRH---RN 763
LIGRG +G+VY+ + + G VA+K+ N DV E ++ +R N
Sbjct: 8 LIGRGAYGAVYRGKHVPTGRVVALKIINLDT----PDDDVSDIQREVALLSQLRQSQPPN 63
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
I K G L+ + +EY GS+ + L + I + + + I+ +V AL+Y+
Sbjct: 64 ITKYYGSYLKG--PRLW--IIMEYAEGGSV-RTLMKAGPIAEKYISV-IIREVLVALKYI 117
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQTQTPATIGYMALE 882
+ VIH D+K +N+L+ + L DFG+ LL + + T TP +MA E
Sbjct: 118 H---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPY---WMAPE 171
Query: 883 YGSEGRV-STNGDVYNFGVMLMETFTGKKP 911
+EG+ T D+++ G+ + E TG P
Sbjct: 172 VITEGKYYDTKADIWSLGITIYEMATGNPP 201
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 3e-13
Identities = 62/298 (20%), Positives = 122/298 (40%), Gaps = 49/298 (16%)
Query: 707 GFSENNLIGRGGFGSVYKARIQDGME------VAVKVFN----QQCGRAFKSFDVECEVM 756
E +GRG FG V+ A+ + E V VK + F+ E ++
Sbjct: 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRR---ELDMF 62
Query: 757 KSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI--------LDIFQ 808
+ + H+N+++++ C +A + LEY G L+++L ++ L Q
Sbjct: 63 RKLSHKNVVRLLGLCR----EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQ 118
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
++ + +A +++L + +H DL N L+ +S ++K ++
Sbjct: 119 KVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKD-VYNSEYYK 174
Query: 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVN 927
+ ++A E E ST DV++FGV++ E FT G+ P + +E + +N
Sbjct: 175 LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEV-----LN 229
Query: 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
L ++ E C S ++ + C +P+ R + E+V+ L
Sbjct: 230 R--------------LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 70.6 bits (174), Expect = 4e-13
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKV---------FNQQCGRAFKSFDVECEVMKSIRHRN 763
+G G +G VYKAR + G VA+K R E ++K ++H N
Sbjct: 7 LGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALR-------EISLLKELKHPN 59
Query: 764 IIKIIS-CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
I+K++ + + L+ L EY L+KYL L +IM + L Y
Sbjct: 60 IVKLLDVIHTE---RKLY--LVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAY 113
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ S ++H DLKP N+L+ + V L+DFG
Sbjct: 114 CH---SHRILHRDLKPQNILINRDGVLKLADFG 143
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 4e-13
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 48/239 (20%)
Query: 708 FSENNL-----IGRGGFGSVYKARIQD-GMEVAVK-VFNQQCGRAFKSFDVECE-VMKSI 759
F+ +L IGRG FG+V K + G +AVK + + + K ++ + VM+S
Sbjct: 1 FTAEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS 60
Query: 760 RHRNIIKIISCCSIGDFKALFKA----LALEYMPHGSLEK-YLYSSNYILDIFQRLNIMI 814
I+K + ALF+ + +E M SL+K Y Y + + I+
Sbjct: 61 DCPYIVKF--------YGALFREGDCWICMELM-DISLDKFYKYVYEVLKSVIPE-EILG 110
Query: 815 DVA----SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870
+A AL YL +IH D+KPSN+LL N L DFGI+ L + +T
Sbjct: 111 KIAVATVKALNYL--KEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS---IAKT 165
Query: 871 QTPATIGYMALEYGSEGRVSTNG--------DVYNFGVMLMETFTGKKPT---NEIFNE 918
+ YMA E R+ + DV++ G+ L E TGK P N +F++
Sbjct: 166 RDAGCRPYMAPE-----RIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQ 219
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 4e-13
Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 46/290 (15%)
Query: 714 IGRGGFGSVYKARIQDGME------VAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIK 766
+G+G FG VY+ +D ++ VAVK N+ R F E VMK ++++
Sbjct: 14 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYS-----SNYILDIFQRLNIMI----DVA 817
++ S K + +E M HG L+ YL S N L MI ++A
Sbjct: 74 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 129
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
+ YL + +H DL N ++ + + DFG+T+ + D + + +
Sbjct: 130 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
+MA E +G +T+ D+++FGV+L E + ++P + NE ++K
Sbjct: 187 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------------QVLK 232
Query: 937 IV-DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
V DG L + + C V ++ C +P+ R EIV L
Sbjct: 233 FVMDGGYLDQ-------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 5e-13
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Query: 733 VAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHG 791
VAVK+ + A F E ++M +++ NII+++ C D + EYM +G
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMIT----EYMENG 102
Query: 792 SLEKYL-----YS----SNYI--LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840
L ++L S +N I + I L + + +AS ++YL S +H DL N
Sbjct: 103 DLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRN 159
Query: 841 VLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGV 900
L+G++ ++DFG+++ L D + Q + I +MA E G+ +T DV+ FGV
Sbjct: 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGV 219
Query: 901 MLMETFT 907
L E FT
Sbjct: 220 TLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 7e-13
Identities = 61/264 (23%), Positives = 124/264 (46%), Gaps = 31/264 (11%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V+ + +VAVK + + ++F E +MK+++H ++++ + +
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT- 71
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL-NIMIDVASALEYLYFGYSTPVI 832
K + EYM GSL +L S + +L + +A + Y+ I
Sbjct: 72 ---KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYI 125
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H DL+ +NVL+ ++++ ++DFG+ +++ ++++ + I + A E + G +
Sbjct: 126 HRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIK 184
Query: 893 GDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFV 951
DV++FG++L E T GK P GM+ N ++ ++ + G + R
Sbjct: 185 SDVWSFGILLYEIVTYGKIPY-----PGMS-----NSDVMSALQR---GYRMPR------ 225
Query: 952 AKEQCMSFVFNMAMECTVESPEKR 975
E C ++++ C E E+R
Sbjct: 226 -MENCPDELYDIMKTCWKEKAEER 248
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 70.1 bits (171), Expect = 8e-13
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG+G G+VY A + G EVA++ N Q + E VM+ ++ NI+ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+GD L+ + +EY+ GSL + + +D Q + + ALE+L+ S VI
Sbjct: 88 VGD--ELW--VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVI 138
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H D+K N+LLG + L+DFG +T E ++ T +MA E +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 893 GDVYNFGVMLMETFTGKKP 911
D+++ G+M +E G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 8e-13
Identities = 59/264 (22%), Positives = 120/264 (45%), Gaps = 32/264 (12%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V+ +VA+K +Q + ++F E +MK ++H ++++ + +
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ 72
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+ EYM +GSL +L + I L I + +++ +A + ++ I
Sbjct: 73 EPI-----YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYI 124
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H DL+ +N+L+ + + ++DFG+ +L+ ++++ + I + A E + G +
Sbjct: 125 HRDLRAANILVSETLCCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIK 183
Query: 893 GDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFV 951
DV++FG++L E T G+ P GMT + + L R +
Sbjct: 184 SDVWSFGILLTEIVTYGRIPY-----PGMTNPEVIQN--------------LER-GYRMP 223
Query: 952 AKEQCMSFVFNMAMECTVESPEKR 975
+ C ++ + C E PE+R
Sbjct: 224 RPDNCPEELYELMRLCWKEKPEER 247
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 9e-13
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 110 DNQ-LSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPK 168
DNQ L G IP +I S L +S+NLS N G IP +L + T L +L LSYN F G IP+
Sbjct: 426 DNQGLRGFIPNDI-SKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE 484
Query: 169 EIGNLTKLEELYLSFNGLQG 188
+G LT L L L+ N L G
Sbjct: 485 SLGQLTSLRILNLNGNSLSG 504
|
Length = 623 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 1e-12
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
+G G FG VYKA+ + G+ A K+ + + F VE +++ +H NI+ +
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72
Query: 773 I-GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
L +E+ G+L+ + L Q + + AL +L+ S V
Sbjct: 73 YENKLWIL-----IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKV 124
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ----FVTQTQTPATIG--YMALEYGS 885
IH DLK N+LL + L+DFG++ Q F+ TP + +A E
Sbjct: 125 IHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG---TPYWMAPEVVACETFK 181
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915
+ D+++ G+ L+E + P +E+
Sbjct: 182 DNPYDYKADIWSLGITLIELAQMEPPHHEL 211
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 1e-12
Identities = 75/294 (25%), Positives = 114/294 (38%), Gaps = 70/294 (23%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
F +G G +GSVYKA + G VA+KV + E ++K I+K
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVK 62
Query: 767 IISCCSIGDFKALFKA----LALEYMPHGSLEKYLYSSNYILDIFQRLN----------I 812
+ + FK + +EY GS + DI + N I
Sbjct: 63 Y--------YGSYFKNTDLWIVMEYCGAGS----------VSDIMKITNKTLTEEEIAAI 104
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT 872
+ LEYL+ S IH D+K N+LL + A L+DFG++ LT T +
Sbjct: 105 LYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD-----TMAKR 156
Query: 873 PATIG---YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929
IG +MA E E + D+++ G+ +E GK P ++I H +
Sbjct: 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI--------HPMRAI 208
Query: 930 LLISIM---KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKE 980
+I + D S E FV K C V+ PE+R +A +
Sbjct: 209 FMIPNKPPPTLSDPEKWSPEFNDFVKK-------------CLVKDPEERPSAIQ 249
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 1e-12
Identities = 63/295 (21%), Positives = 124/295 (42%), Gaps = 50/295 (16%)
Query: 714 IGRGGFGSVYKARI------QDGMEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIK 766
+G FG VYK + + VA+K + + F E + ++H NI+
Sbjct: 13 LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVC 72
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLY---------------SSNYILDIFQRLN 811
++ + K ++ Y H L ++L + L+ ++
Sbjct: 73 LLGVVT----KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVH 128
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
I+ +A+ +E+L S V+H DL NVL+ D + +SD G+ + + D +
Sbjct: 129 IVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGN 185
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930
+ I +M+ E G+ S + D++++GV+L E F+ G +P N+
Sbjct: 186 SLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------------ 233
Query: 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+++++ R + C ++V+ + +EC E P +R K+I +RL
Sbjct: 234 --DVIEMI------RNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 69.4 bits (169), Expect = 1e-12
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG+G G+VY A I G EVA+K N Q + E VM+ ++ NI+ +
Sbjct: 27 IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 86
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+GD L+ + +EY+ GSL + + +D Q + + AL++L+ S VI
Sbjct: 87 VGD--ELW--VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLH---SNQVI 137
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YMALEYGSEGRV 889
H D+K N+LLG + L+DFG +T E Q++ +G +MA E +
Sbjct: 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSTMVGTPYWMAPEVVTRKAY 192
Query: 890 STNGDVYNFGVMLMETFTGKKP 911
D+++ G+M +E G+ P
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 2e-12
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR------HRNII 765
+G G F S Y+AR ++ G +AVK + + +V + K IR H +II
Sbjct: 7 QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII 66
Query: 766 KII-SCCSIGDFKALFKALALEYMPHGS----LEKYLYSSNYILDIFQRLNIMIDVASAL 820
+++ + C F L +E+M GS L KY ++ +N + L
Sbjct: 67 RMLGATCEDSHFN-----LFVEWMAGGSVSHLLSKYGAFKEAVI-----INYTEQLLRGL 116
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL--SDFG----ITKLLTREDQFVTQTQTPA 874
YL+ +IH D+K +N+L+ D+ L +DFG + T +F Q Q
Sbjct: 117 SYLH---ENQIIHRDVKGANLLI-DSTGQRLRIADFGAAARLAAKGTGAGEF--QGQLLG 170
Query: 875 TIGYMALEY---GSEGRVSTNGDVYNFGVMLMETFTGKKPTN 913
TI +MA E GR DV++ G +++E T K P N
Sbjct: 171 TIAFMAPEVLRGEQYGRSC---DVWSVGCVIIEMATAKPPWN 209
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 2e-12
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 713 LIGRGGFGSVYKA-RIQDG----MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIK 766
++G G FG+VYK I DG + VA+KV + +A K E VM + + +
Sbjct: 14 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCR 73
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
++ C + L + MP+G L Y+ + + LN + +A + YL
Sbjct: 74 LLGICLTSTVQ-----LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE-- 126
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
++H DL NVL+ ++DFG+ +LL ++ I +MALE
Sbjct: 127 -EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILH 185
Query: 887 GRVSTNGDVYNFGVMLMETFT-GKKPTNEI 915
R + DV+++GV + E T G KP + I
Sbjct: 186 RRFTHQSDVWSYGVTVWELMTFGAKPYDGI 215
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 2e-12
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 714 IGRGGFGSVY--------KARIQDGMEVAVKVF-NQQCGRAFKSFDVECEVMKSI-RHRN 763
+G G FG V K + + VAVK+ + + E E+MK I +H+N
Sbjct: 20 LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN 79
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSS-----NYILD---------IFQR 809
II ++ C+ L+ + +EY G+L +YL + +Y D F+
Sbjct: 80 IINLLGACTQDG--PLY--VLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKD 135
Query: 810 L-NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
L + VA +EYL S IH DL NVL+ ++ V ++DFG+ + + D +
Sbjct: 136 LVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKK 192
Query: 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
T + +MA E + + DV++FGV+L E FT G P
Sbjct: 193 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 236
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 69.1 bits (170), Expect = 2e-12
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKS-FDV-----ECEVMKSIRHRNI 764
IG G +G V A + G +VA+K + F D E ++++ +RH NI
Sbjct: 6 KPIGSGAYGVVCSAVDKRTGRKVAIK----KISNVFDDLIDAKRILREIKLLRHLRHENI 61
Query: 765 IKIISCC---SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821
I ++ S DF ++ + E M L K + S + D + + + L+
Sbjct: 62 IGLLDILRPPSPEDFNDVY--IVTELMET-DLHKVIKSPQPLTDDHIQY-FLYQILRGLK 117
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL-TREDQFVTQTQTPATIGYMA 880
YL+ S VIH DLKPSN+L+ N + DFG+ + + ED+ T+ T Y A
Sbjct: 118 YLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRA 174
Query: 881 LE-YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL---KHWVNDWLLISIMK 936
E S R + D+++ G + E T K L + +++ L I++
Sbjct: 175 PELLLSSSRYTKAIDIWSVGCIFAELLTRK-----------PLFPGRDYIDQLNL--IVE 221
Query: 937 IVDGSLLSREDIQFVAKEQCMSFV 960
++ G+ S ED++F+ E+ +++
Sbjct: 222 VL-GT-PSEEDLKFITSEKARNYL 243
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 63/218 (28%), Positives = 89/218 (40%), Gaps = 28/218 (12%)
Query: 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAF-KSFDVECEVMKSIRHRN 763
+ E + +G G GSV K R+ GM A+K K E E+ KS +
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60
Query: 764 IIKII------SCCSIGDFKALFKALALEYMPHGSLE---KYLYSSNYILDIFQRLNIMI 814
I+K S SIG +A+EY GSL+ K + + I
Sbjct: 61 IVKYYGAFLDESSSSIG--------IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAE 112
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT-KLLTREDQFVTQTQTP 873
V L YL+ S +IH D+KPSN+LL L DFG++ +L+ T T
Sbjct: 113 SVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSF- 168
Query: 874 ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
YMA E S DV++ G+ L+E + P
Sbjct: 169 ----YMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFP 202
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 75/232 (32%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 706 DGFSENNLIGRGGFGSVYKARIQD-GMEVA---VKVFNQQCGRAFKSFDVECEVMKSIRH 761
D F IG G +G VYKAR +D G VA V++ N++ G + E ++++ + H
Sbjct: 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIR-EIKILRQLNH 65
Query: 762 RNIIKIISCCSI-------GDFKALFKA--LALEYMPH---GSLEKYL--YSSNYILDIF 807
RNI+ + I DFK A L EYM H G LE L +S ++I
Sbjct: 66 RNIVNL---KEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFM 122
Query: 808 QRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV 867
++L LE L + + +H D+K SN+LL + L+DFG+ +L E+
Sbjct: 123 KQL---------LEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES-R 172
Query: 868 TQTQTPATIGYMALE--YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFN 917
T T+ Y E G E R DV++ G +L E FT KKP IF
Sbjct: 173 PYTNKVITLWYRPPELLLGEE-RYGPAIDVWSCGCILGELFT-KKP---IFQ 219
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 68.0 bits (166), Expect = 3e-12
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVF-----NQQCG-RAFKSFDVECEVMKSIRH 761
+++ ++G+G +G+VY G +AVK N + ++ E +++KS++H
Sbjct: 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH 61
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDI-FQRLNIMIDVASAL 820
NI++ + C + ++F +E++P GS+ L + + F + I L
Sbjct: 62 VNIVQYLGTCLDDNTISIF----MEFVPGGSISSILNRFGPLPEPVFCKYTKQI-----L 112
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL-------TREDQFVTQTQTP 873
+ + + ++ V+H D+K +NV+L N + L DFG + L T + + TP
Sbjct: 113 DGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTP 172
Query: 874 ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+MA E +E D+++ G + E TGK P
Sbjct: 173 Y---WMAPEVINESGYGRKSDIWSIGCTVFEMATGKPP 207
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 3e-12
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
+G G FG VYKA+ ++ G A KV + + + VE E++ + H I+K++
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLL---- 75
Query: 773 IGDFKALFK-ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
G F K + +E+ P G+++ + + L I + LE L + +S +
Sbjct: 76 -GAFYWDGKLWIMIEFCPGGAVDAIMLELDRGL---TEPQIQVICRQMLEALQYLHSMKI 131
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGI----TKLLTREDQFVTQTQTPATIGYMA-----LE 882
IH DLK NVLL + L+DFG+ K L R D F+ TP +MA E
Sbjct: 132 IHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIG---TPY---WMAPEVVMCE 185
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915
+ D+++ G+ L+E + P +E+
Sbjct: 186 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 218
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 4e-12
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQ------CGRAFKSFDVECEVMKSIRHRNIIK 766
IG G +G VYKAR G VA+K + A + E +++K + H NIIK
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALR----EIKLLKELNHPNIIK 62
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
++ L L E+M L K + L + + + L + +
Sbjct: 63 LLDV--FRHKGDL--YLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH-- 115
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE--YG 884
S ++H DLKP N+L+ V L+DFG+ + T T Y A E G
Sbjct: 116 -SHGILHRDLKPENLLINTEGVLKLADFGLARSFG--SPVRPYTHYVVTRWYRAPELLLG 172
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGK 909
+G ST D+++ G + E + +
Sbjct: 173 DKG-YSTPVDIWSVGCIFAELLSRR 196
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 4e-12
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 708 FSENNL-----IGRGGFGSVYKA------RIQDGMEVAVKVFNQQCGRAFK-SFDVECEV 755
F NNL +G G FG V +A + M+VAVK+ + + + E ++
Sbjct: 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKI 91
Query: 756 MKSI-RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS-SNYILDIFQRLNIM 813
M + H NI+ ++ C+IG + EY +G L +L L + L+
Sbjct: 92 MSHLGNHENIVNLLGACTIGGPILVI----TEYCCYGDLLNFLRRKRESFLTLEDLLSFS 147
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP 873
VA + +L S IH DL NVLL + + DFG+ + + + +V +
Sbjct: 148 YQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNAR 204
Query: 874 ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT 907
+ +MA E + DV+++G++L E F+
Sbjct: 205 LPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 4e-12
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 48/170 (28%)
Query: 714 IGRGGFGSVYKARIQDGME-VAVKVFNQQCGRAFKSFDVEC----EVMKSIR----HRNI 764
+G G FGSVY AR ++ E VA+K ++ F S++ EC EV KS+R H NI
Sbjct: 7 LGDGTFGSVYLARNKETGELVAIKKMKKK----FYSWE-ECMNLREV-KSLRKLNEHPNI 60
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL-------NIMIDVA 817
+K+ + L+ EYM E LY + D + +I+ +
Sbjct: 61 VKLKE--VFRENDELY--FVFEYM-----EGNLY--QLMKDRKGKPFSESVIRSIIYQIL 109
Query: 818 SALEYL----YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
L ++ +F H DLKP N+L+ V ++DFG L RE
Sbjct: 110 QGLAHIHKHGFF-------HRDLKPENLLVSGPEVVKIADFG----LARE 148
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 4e-12
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 714 IGRGGFGSVYKARIQDGME-VAVKVFNQQCGRAFKSFDV-----ECEVMKSIRHRNIIKI 767
+G+GG+G V+ A+ +D E VA+K + FK +V E +++ + + ++K+
Sbjct: 9 VGQGGYGQVFLAKKKDTGEIVALKRMKKSL--LFKLNEVRHVLTERDILTTTKSEWLVKL 66
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNI--MIDVASALEYLYF 825
+ + D + L+ LA+EY+P G L + + + R + M + AL L
Sbjct: 67 LY--AFQDDEYLY--LAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL-- 120
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK-LLTREDQFVTQTQTPATIGYMALEYG 884
GY IH DLKP N L+ + L+DFG++K ++T + V YMA E
Sbjct: 121 GY----IHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPD------YMAPEVL 170
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFNEGMTLKHW 925
D ++ G ML E G P NE + LK+W
Sbjct: 171 RGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE---NLKYW 213
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 5e-12
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 713 LIGRGGFGSVYKA-RIQDGMEVAVKVF-----NQQCGRAFKSFDVECEVMKSIRHRNIIK 766
L+G G FGSVY+ + DG AVK Q A K + E ++ ++H NI++
Sbjct: 7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ D +F LE +P GSL K L + LEYL+
Sbjct: 67 YLGTEREEDNLYIF----LELVPGGSLAK-LLKKYGSFPEPVIRLYTRQILLGLEYLH-- 119
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY-GS 885
+H D+K +N+L+ N V L+DFG+ K + + +P +MA E
Sbjct: 120 -DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPY---WMAPEVIAQ 175
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKPTNEIF 916
+G D+++ G ++E TGK P +++
Sbjct: 176 QGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 6e-12
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 31/231 (13%)
Query: 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVA---VKVFNQQCGRAFKSFDVECEVMKSIR 760
F IG+G F VYKA + DG VA V++F +A + E +++K +
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 761 HRNIIKIISCCSIGDFKALFKALALEYMPHGSLE---KYLYSSNYILDIFQRLNIMIDVA 817
H N+IK ++ S + L + LE G L K+ ++ + +
Sbjct: 61 HPNVIKYLA--SFIENNELN--IVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC 116
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV-TQTQTPATI 876
SALE+++ S ++H D+KP+NV + V L D G+ + + + + TP
Sbjct: 117 SALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY-- 171
Query: 877 GYMALEYGSEGRVSTNG-----DVYNFGVMLMETFTGKKPTNEIFNEGMTL 922
YM+ E R+ NG D+++ G +L E + P + + M L
Sbjct: 172 -YMSPE-----RIHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNL 213
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 6e-12
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
+G G G+VYKA + +AVKV D+ E+ K I ++I+ C
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVI---------PLDITVELQKQIMSE--LEILYKCD 57
Query: 773 ----IGDFKALFK----ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
IG + A F ++ E+M GSL+ Y ++L I + V L YL+
Sbjct: 58 SPYIIGFYGAFFVENRISICTEFMDGGSLDVYRKIPEHVLG-----RIAVAVVKGLTYLW 112
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG 884
S ++H D+KPSN+L+ L DFG++ L + +T T YMA E
Sbjct: 113 ---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IAKTYV-GTNAYMAPERI 165
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF-NEG 919
S + + DV++ G+ ME G+ P +I N+G
Sbjct: 166 SGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG 201
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 7e-12
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 32/264 (12%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V+ A +VAVK + + ++F E VMK+++H ++K+ + +
Sbjct: 14 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 72
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASAL-EYLYFGYSTPVI 832
+ ++ + E+M GSL +L S Q L +ID ++ + E + F I
Sbjct: 73 ---EPIY--IITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYI 124
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H DL+ +N+L+ ++V ++DFG+ +++ ++++ + I + A E + G +
Sbjct: 125 HRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIK 183
Query: 893 GDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFV 951
DV++FG++LME T G+ P GM+ I + G + R +
Sbjct: 184 SDVWSFGILLMEIVTYGRIPY-----PGMSNPE--------VIRALERGYRMPRPE---- 226
Query: 952 AKEQCMSFVFNMAMECTVESPEKR 975
C ++N+ M C PE+R
Sbjct: 227 ---NCPEELYNIMMRCWKNRPEER 247
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 8e-12
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 406 LGGNN--LNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSI 463
LG +N L G IP + KL+ LQ + N + G+IP + + + LDLS N +GSI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 464 PACFGDLASLRNLSLASNELISVIPS 489
P G L SLR L+L N L +P+
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPA 508
|
Length = 623 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 9e-12
Identities = 74/298 (24%), Positives = 118/298 (39%), Gaps = 68/298 (22%)
Query: 708 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFN-----------QQCGRAFKSFDVECEV 755
F+ IG+G FG VYKA + VA+KV + QQ E +
Sbjct: 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQ----------EIQF 52
Query: 756 MKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMID 815
+ R I K + K + +EY GS L LD I+ +
Sbjct: 53 LSQCRSPYITKYYGS-FLKGSKL---WIIMEYCGGGSCLDLLKP--GKLDETYIAFILRE 106
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG----ITKLLTREDQFVTQTQ 871
V LEYL+ IH D+K +N+LL + L+DFG +T +++ + FV
Sbjct: 107 VLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVG--- 160
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931
TP +MA E + D+++ G+ +E G+ P +++ H + L
Sbjct: 161 TPF---WMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDL--------HPMRVLFL 209
Query: 932 ISIMKI--VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
I ++G+ S+ FV+ C + P++R +AKE LLK
Sbjct: 210 IPKNNPPSLEGNKFSKPFKDFVSL-------------CLNKDPKERPSAKE----LLK 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 9e-12
Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 713 LIGRGGFGSVYKARIQ--DGMEVAVKVFNQQCG---RAFKSFDVECEVMKSIRHRNIIKI 767
+IG G FG V + R++ E+ V + + G + + F E +M H NII +
Sbjct: 11 VIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHL 70
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ K+ + E+M +G+L+ +L ++ + Q + ++ +A+ ++YL
Sbjct: 71 EGVVT----KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS--- 123
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA-----TIGYMALE 882
+H DL N+L+ N+V +SDFG+++ L ED T T + I + A E
Sbjct: 124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSSLGGKIPIRWTAPE 181
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918
+ + ++ DV+++G+++ E + G++P ++ N+
Sbjct: 182 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 218
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 1e-11
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ 112
+ ++N+S S+ G IP LG+++SL+ L L N F+GSIP S+ + +L++L+ N
Sbjct: 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMFHGGIP 143
LSG +P + L S N + N GIP
Sbjct: 502 LSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532
|
Length = 623 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 1e-11
Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 48/288 (16%)
Query: 713 LIGRGGFGSVYKA-RIQDGMEVAVK------VFNQQCGRAFKS----FDVECEVMKSIRH 761
LIG+G +G VY A + G +AVK + K E E +K + H
Sbjct: 8 LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGS----LEKYLYSSNYILDIFQRLNIMIDVA 817
NI++ + + ++ ++F LEY+P GS L Y ++ F V
Sbjct: 68 LNIVQYLGFETTEEYLSIF----LEYVPGGSIGSCLRTYGRFEEQLVRFFTE-----QVL 118
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF--VTQTQTPAT 875
L YL+ S ++H DLK N+L+ + + +SDFGI+K +D + +
Sbjct: 119 EGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISK--KSDDIYDNDQNMSMQGS 173
Query: 876 IGYMALEYGSEGRVSTNG--DVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933
+ +MA E + D+++ G +++E F G++P W ++ + +
Sbjct: 174 VFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-------------WSDEEAIAA 220
Query: 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ K+ G+ S I + C +P+ R A+E+
Sbjct: 221 MFKL--GNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTAREL 266
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 1e-11
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 29/206 (14%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVK------VFNQQCGRAFKSFDVECEVMKSIRHRNI 764
+G G + VYKAR + G VA+K + G F + E ++++ ++H NI
Sbjct: 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALR-EIKLLQELKHPNI 64
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
I ++ L E+M LEK + + +L + M+ LEYL+
Sbjct: 65 IGLLDVFGHKSNINL----VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH 119
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ----TQTPATIGYMA 880
+ ++H DLKP+N+L+ + V L+DFG L R F + T T Y A
Sbjct: 120 SNW---ILHRDLKPNNLLIASDGVLKLADFG----LAR--SFGSPNRKMTHQVVTRWYRA 170
Query: 881 LE--YGSEGRVSTNGDVYNFGVMLME 904
E +G+ D+++ G + E
Sbjct: 171 PELLFGAR-HYGVGVDMWSVGCIFAE 195
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 1e-11
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 29/213 (13%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN---QQCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G G V A G +VAVK + QQ R F+ E +M+ +H NI+++ S
Sbjct: 27 IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQ--RRELLFN-EVVIMRDYQHPNIVEMYS 83
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
+GD L+ + +E++ G+L + + ++ Q + + V AL +L+ +
Sbjct: 84 SYLVGD--ELW--VVMEFLEGGALTDIVTHTR--MNEEQIATVCLAVLKALSFLH---AQ 134
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFG----ITKLLTREDQFVTQTQTPATIGYMALEYGS 885
VIH D+K ++LL + LSDFG ++K + R V TP +MA E S
Sbjct: 135 GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVG---TPY---WMAPEVIS 188
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE 918
T D+++ G+M++E G+ P FNE
Sbjct: 189 RLPYGTEVDIWSLGIMVIEMVDGEPP---YFNE 218
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 1e-11
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 65/307 (21%)
Query: 714 IGRGGFGSVYKA--------RIQDGMEVAVKVF-NQQCGRAFKSFDVECEVMKSI-RHRN 763
+G G FG V +A R + VAVK+ + + E E+MK I +H+N
Sbjct: 20 LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKN 79
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSS-----NYILDI---------FQR 809
II ++ C+ L+ + +EY G+L ++L + +Y DI F+
Sbjct: 80 IINLLGVCT--QEGPLY--VIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 810 L-NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
L + VA +EYL S IH DL NVL+ ++ V ++DFG+ + + D +
Sbjct: 136 LVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK 192
Query: 869 QTQTPATIGYMALEYGSEGRVSTN-GDVYNFGVMLMETFT--GKK----PTNEIFNEGMT 921
+ + +MA E + RV T+ DV++FG+++ E FT G P E+F
Sbjct: 193 TSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK---- 247
Query: 922 LKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
L RE + C ++ + EC P +R K++
Sbjct: 248 ---------------------LLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQL 286
Query: 982 VTRLLKI 988
V L K+
Sbjct: 287 VEALDKV 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 2e-11
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 713 LIGRGGFGSVYKARIQD-GMEVAVKV--FNQQCGRAFKSFD-VECEV--MKSIRHRNIIK 766
L+GRG FG VY D G E+AVK F+ K + +ECE+ +K++RH I++
Sbjct: 9 LLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ 68
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD-IFQRLNIMIDVASALEYLYF 825
C + K L ++ +EYMP GS++ L + + + + +R I L+ + +
Sbjct: 69 YYGCLRDPEEKKL--SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQI-----LQGVSY 121
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YMALE 882
+S ++H D+K +N+L L DFG +K + + ++ T + G +M+ E
Sbjct: 122 LHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI--QTICMSGTGIKSVTGTPYWMSPE 179
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914
S DV++ ++E T K P E
Sbjct: 180 VISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 2e-11
Identities = 82/339 (24%), Positives = 139/339 (41%), Gaps = 63/339 (18%)
Query: 683 NDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGME---------V 733
++ ++P++ W D +G G FG V A G++ V
Sbjct: 3 SEYELPEDPRWE--------VPRDRLVLGKPLGEGCFGQVVMAEAI-GLDKEKPNRVTKV 53
Query: 734 AVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALEYMPHG 791
AVK+ + E E+MK I +H+NII ++ C+ L+ + +EY G
Sbjct: 54 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLY--VIVEYASKG 109
Query: 792 SLEKYL---------YSSN------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDL 836
+L +YL Y N L ++ VA +EYL S IH DL
Sbjct: 110 NLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDL 166
Query: 837 KPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVY 896
NVL+ ++ V ++DFG+ + + D + T + +MA E + + DV+
Sbjct: 167 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 226
Query: 897 NFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQ 955
+FGV+L E FT G P G+ ++ L ++K +G + +
Sbjct: 227 SFGVLLWEIFTLGGSPY-----PGVPVEE------LFKLLK--EGHRMDK-------PSN 266
Query: 956 CMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994
C + ++ M +C P +R K++V L +I L N
Sbjct: 267 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTSN 305
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 2e-11
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 714 IGRGGFGSVYKARIQ---DGMEVAVKVF-NQQCGRAFK-SFDVECEVMKSIRHRNIIKII 768
+G G FG+V K + VAVK+ N A K E VM+ + + I+++I
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
C +A L +E G L K+L + ++ + ++ V+ ++YL
Sbjct: 63 GIC-----EAESWMLVMELAELGPLNKFLQKNKHVTE-KNITELVHQVSMGMKYLE---E 113
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQTQTPATIGYMALEYGSEG 887
T +H DL NVLL A +SDFG++K L E+ + +T + + A E +
Sbjct: 114 TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY 173
Query: 888 RVSTNGDVYNFGVMLMETFT-GKKP 911
+ S+ DV++FGV++ E F+ G+KP
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQKP 198
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 3e-11
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFD-------VECEVMKSIRHRNII 765
IG G G V+KA+ + G VA+K + R + E + +++ +H ++
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALK---KVALR--RLEGGIPNQALREIKALQACQHPYVV 62
Query: 766 KII------SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASA 819
K++ S L +EYMP L + L L Q + M +
Sbjct: 63 KLLDVFPHGSGFV----------LVMEYMPS-DLSEVLRDEERPLPEAQVKSYMRMLLKG 111
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYM 879
+ Y++ + ++H DLKP+N+L+ + V ++DFG+ +L + E+ + Q AT Y
Sbjct: 112 VAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQV-ATRWYR 167
Query: 880 ALE--YGS 885
A E YG+
Sbjct: 168 APELLYGA 175
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 4e-11
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 432 DNK-LEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPST 490
DN+ L G IP+++ +L + ++LS N + G+IP G + SL L L+ N IP +
Sbjct: 426 DNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPES 485
Query: 491 FWNLKDILYLNLSSNSLTGPLPLEIG 516
L + LNL+ NSL+G +P +G
Sbjct: 486 LGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 4e-11
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKS------FDVECEVMKSIRHRNIIKI 767
IG G FG V GM A V + RA + F E + + + H N+++
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKEL--RASATPDEQLLFLQEVQPYRELNHPNVLQC 60
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYIL------DIFQRLNIMIDVASALE 821
+ C +++ L LE+ P G L+ YL S+ ++ D+ QR+ +VAS L
Sbjct: 61 LGQCI----ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRM--ACEVASGLL 114
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
+L+ IH DL N L ++ + D+G+ ED ++T+ + ++A
Sbjct: 115 WLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAP 171
Query: 882 EYGSE-------GRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918
E + ++++ GV + E FT +P ++ +E
Sbjct: 172 ELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE 216
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 6e-11
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 714 IGRGGFGSVYKARIQDGM---EVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G FG V + G +V VK + F E + +S++H N+++ +
Sbjct: 3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYS----SNYILDIFQRLNIMIDVASALEYLYF 825
C+ + L +E+ P G L+ YL S D + ++A L +L+
Sbjct: 63 QCT----EVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH- 117
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS 885
IH DL N LL ++ + D+G++ +ED +VT Q + ++A E
Sbjct: 118 --KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVD 175
Query: 886 E--GRV-----STNGDVYNFGVMLMETFT-GKKP 911
E G + + +V++ GV + E F G +P
Sbjct: 176 EVHGNLLVVDQTKESNVWSLGVTIWELFELGSQP 209
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 7e-11
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 389 GSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAK 448
G IP +I L +L L GN++ G+IP +LG + L+VL N GSIP+ + +L
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 449 VYQLDLSNNKLSGSIPACFG 468
+ L+L+ N LSG +PA G
Sbjct: 492 LRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 7e-11
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 45/228 (19%)
Query: 714 IGRGGFGSVYKARIQDGME-----------------VAVKVFNQQCGR-AFKSFDVECEV 755
+G G FG V+ + + + VAVK+ + A F E ++
Sbjct: 13 LGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKI 72
Query: 756 MKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQR------ 809
+ ++ NII+++ C D + EYM +G L ++L SS+++ D +
Sbjct: 73 LSRLKDPNIIRLLGVCVDEDPLCMIT----EYMENGDLNQFL-SSHHLDDKEENGNDAVP 127
Query: 810 -------------LNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856
L++ + +AS ++YL S +H DL N L+G+N+ ++DFG+
Sbjct: 128 PAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGM 184
Query: 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLME 904
++ L D + Q + I +MA E G+ +T DV+ FGV L E
Sbjct: 185 SRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWE 232
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 8e-11
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 27/215 (12%)
Query: 708 FSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFN-QQCGRAFKSFDV-ECEVMKSIRHRNI 764
F N IG+G FG V+K R D A+K + + R + + E V+ + I
Sbjct: 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS-------SNYILDIFQRLNIMIDVA 817
I+ + K + +EY +G L K L + + F I +
Sbjct: 62 IRYYESF-LDKGKL---NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFF------IQIL 111
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV-TQTQTPATI 876
L +L+ S ++H D+K N+ L + D G+ KLL+ F T TP
Sbjct: 112 LGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPY-- 166
Query: 877 GYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
Y++ E + + DV+ GV+L E TGK P
Sbjct: 167 -YLSPELCEDKPYNEKSDVWALGVVLYECCTGKHP 200
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 9e-11
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 43 WTGVTCDVHSHR----VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF 98
W+G C S + + L + + L G IP+ + L LQS+ L N G+IP S+
Sbjct: 404 WSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLG 463
Query: 99 NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLS 158
+I +L++L N +G IP ++ L LNL+ N G +P+AL L +
Sbjct: 464 SITSLEVLDLSYNSFNGSIPESL-GQLTSLRILNLNGNSLSGRVPAALGG-RLLHRASFN 521
Query: 159 YNDFAG--GIP 167
+ D AG GIP
Sbjct: 522 FTDNAGLCGIP 532
|
Length = 623 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 62.8 bits (152), Expect = 1e-10
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG G +G VYKAR + G A+KV + G F E +MK +H NI+
Sbjct: 17 IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYF---- 72
Query: 773 IGDFKALFKA-LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
G + K + +E+ GSL+ +Y ++ I L+ LY+ +S
Sbjct: 73 -GSYLRRDKLWICMEFCGGGSLQD-IY---HVTGPLSESQIAYVSRETLQGLYYLHSKGK 127
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861
+H D+K +N+LL DN L+DFG++ +T
Sbjct: 128 MHRDIKGANILLTDNGHVKLADFGVSAQIT 157
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN---QQCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G FG+VY AR ++ VA+K + +Q ++ E ++ +RH N I+
Sbjct: 23 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEY-K 81
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDI----FQRLNIMIDVASALEYLYF 825
C + + A L +EY L S++ IL++ Q + I AL+ L +
Sbjct: 82 GCYLREHTAW---LVMEYC--------LGSASDILEVHKKPLQEVEIAAICHGALQGLAY 130
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY-- 883
+S IH D+K N+LL + L+DFG L++ + FV TP +MA E
Sbjct: 131 LHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVG---TPY---WMAPEVIL 184
Query: 884 -GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFN 917
EG+ DV++ G+ +E K P +FN
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 216
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 2e-10
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 713 LIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDV------ECEVMKSIRHRNII 765
++G G +G V K R + G VA+K F + + DV E +V++ +RH NI+
Sbjct: 8 VVGEGAYGVVLKCRNKATGEIVAIKKFKE----SEDDEDVKKTALREVKVLRQLRHENIV 63
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
+ L+ L EY+ LE L +S L + + + A+ Y +
Sbjct: 64 NLKEAFRRKG--RLY--LVFEYVERTLLE-LLEASPGGLPPDAVRSYIWQLLQAIAYCH- 117
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861
S +IH D+KP N+L+ ++ V L DFG + L
Sbjct: 118 --SHNIIHRDIKPENILVSESGVLKLCDFGFARALR 151
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 40/218 (18%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK-----VFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
+GRG +G V K R + G +AVK V +Q+ R D+ M+S
Sbjct: 9 LGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDIS---MRS--------- 56
Query: 768 ISCC--SIGDFKALFKA----LALEYMPHGSLEKYLYSSNYILDIFQRLNIM----IDVA 817
C ++ + ALF+ + +E M SL+K Y Y + +I+ + +
Sbjct: 57 -VDCPYTVTFYGALFREGDVWICMEVM-DTSLDK-FYKKVYDKGLTIPEDILGKIAVSIV 113
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
ALEYL+ S VIH D+KPSNVL+ N L DFGI+ L V +T
Sbjct: 114 KALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS---VAKTIDAGCKP 168
Query: 878 YMALEY----GSEGRVSTNGDVYNFGVMLMETFTGKKP 911
YMA E ++ DV++ G+ ++E TG+ P
Sbjct: 169 YMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFP 206
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 3e-10
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 36/234 (15%)
Query: 692 TWRRFSYLELCQATDGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----NQQCGRA 745
WRR L+G+G FG VY + G E+A K + + +
Sbjct: 3 NWRR---------------GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKE 47
Query: 746 FKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD 805
+ + E +++K+++H I++ C K L + +EYMP GS++ L + + +
Sbjct: 48 VSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL--TIFMEYMPGGSVKDQLKAYGALTE 105
Query: 806 IFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865
R + + YL+ S ++H D+K +N+L L DFG +K L Q
Sbjct: 106 SVTR-KYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRL----Q 157
Query: 866 FVTQTQT-----PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914
+ + T T +M+ E S DV++ G ++E T K P E
Sbjct: 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 1e-09
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKARIQDGMEVA----VKVFNQQCGRAFKSFDVECEVMK 757
C++ F + N IG G +G VY+AR E+ V++ N++ G S E ++
Sbjct: 3 CRSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLR-EITLLL 61
Query: 758 SIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVA 817
++RH NI+++ ++F L +EY L L + Q +M+ +
Sbjct: 62 NLRHPNIVELKEVVVGKHLDSIF--LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLL 118
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP--AT 875
L+YL+ + +IH DLK SN+LL D ++DFG L R + TP T
Sbjct: 119 RGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFG----LARTYGLPAKPMTPKVVT 171
Query: 876 IGYMALE--YGSEGRVSTNGDVYNFGVMLMETFTGK 909
+ Y A E G +T D++ G +L E K
Sbjct: 172 LWYRAPELLLGCTTY-TTAIDMWAVGCILAELLAHK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 1e-09
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN---QQCGRAFKSFDVECEVMKSIRHRN 763
FS+ IG G FG+VY AR +++ VA+K + +Q ++ E ++ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDI----FQRLNIMIDVASA 819
I+ C + L +EY L S++ +L++ Q + I A
Sbjct: 77 TIQYRGCY----LREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGA 124
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYM 879
L+ L + +S +IH D+K N+LL + + L DFG ++ + FV TP +
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG---TPYWMAPE 181
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFN 917
+ EG+ DV++ G+ +E K P +FN
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 216
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 1e-09
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
+G G FG VYKA+ ++ G+ A KV + + + + VE +++ S H NI+K++
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD--- 69
Query: 773 IGDFKALFKA----LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
A + + +E+ G+++ + L Q I + LE L + +
Sbjct: 70 -----AFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQ---IRVVCKQTLEALNYLHE 121
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGI----TKLLTREDQFVTQTQTPATIG--YMALE 882
+IH DLK N+L + L+DFG+ T+ + R D F+ TP + + E
Sbjct: 122 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG---TPYWMAPEVVMCE 178
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915
+ DV++ G+ L+E + P +E+
Sbjct: 179 TSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL 211
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 1e-09
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 713 LIGRGGFGSVYKARIQD-GMEVAVKV--FNQQCGRAFKSFD-VECEV--MKSIRHRNIIK 766
L+G+G FG VY D G E+AVK F+ + K + +ECE+ +K++ H I++
Sbjct: 9 LLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD-IFQRLNIMIDVASALEYLYF 825
C + L ++ +E+MP GS++ L S + + + ++ I LE + +
Sbjct: 69 YYGCLRDPMERTL--SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQI-----LEGVSY 121
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT----REDQFVTQTQTPATIGYMAL 881
+S ++H D+K +N+L L DFG +K L + T TP +M+
Sbjct: 122 LHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPY---WMSP 178
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914
E S D+++ G ++E T K P E
Sbjct: 179 EVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 1e-09
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 728 QDGMEVAVKVFNQQCG---RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784
G EVA+K+ F E + + H NI+ ++ LF
Sbjct: 1 MTGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPP-GLLFAVF- 58
Query: 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL- 843
EY+P +L + L +++ L + +M+ V AL ++ ++H DLKP N+++
Sbjct: 59 -EYVPGRTLREVL-AADGALPAGETGRLMLQVLDALAC---AHNQGIVHRDLKPQNIMVS 113
Query: 844 --GDNMVAHLSDFGITKLL--TREDQFVTQTQTPATIG---YMALEYGSEGRVSTNGDVY 896
G A + DFGI LL R+ T T+T +G Y A E V+ N D+Y
Sbjct: 114 QTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLY 173
Query: 897 NFGVMLMETFTGK 909
+G++ +E TG+
Sbjct: 174 AWGLIFLECLTGQ 186
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 2e-09
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 249 IQGVGLQNNSLSGSLQS-IPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNS 307
I G+GL N L G + + I +L +L+ + L GN G+IP + + + L L+L NS
Sbjct: 420 IDGLGLDNQGLRGFIPNDIS--KLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNS 477
Query: 308 FSGFIPSTFGNLRNLKRLGLNNNHLT 333
F+G IP + G L +L+ L LN N L+
Sbjct: 478 FNGSIPESLGQLTSLRILNLNGNSLS 503
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 3e-09
Identities = 30/90 (33%), Positives = 49/90 (54%)
Query: 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511
L L N L G IP L L++++L+ N + IP + ++ + L+LS NS G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGG 541
P +G L L ++ + N+ SG +P A+GG
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGG 512
|
Length = 623 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 3e-09
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 42/224 (18%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVK---VFNQQCGRAFKSFDVECEVMKSIRHRN 763
F IGRG F VY+A + DG+ VA+K +F+ +A E +++K + H N
Sbjct: 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63
Query: 764 IIK-------------IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL 810
+IK ++ GD + K H +K L + F
Sbjct: 64 VIKYYASFIEDNELNIVLELADAGDLSRMIK--------HFKKQKRLIPEKTVWKYF--- 112
Query: 811 NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870
+ + SALE+++ S V+H D+KP+NV + V L D G+ + + + T
Sbjct: 113 ---VQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-----TT 161
Query: 871 QTPATIG---YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ +G YM+ E E + D+++ G +L E + P
Sbjct: 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 3e-09
Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCC 771
+G G GSV K I G +A KV + + V K I R I+
Sbjct: 13 LGAGNGGSVSKVKHIPTGTVMAKKVVH---------IGAKSSVRKQILRELQIMHECRSP 63
Query: 772 SIGDFKALFKA-----LALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMIDVASALEYLYF 825
I F F + +E+M GSL++ I ++I + I + V L YLY
Sbjct: 64 YIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGK--IAVAVVEGLTYLY- 120
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE--DQFVTQTQTPATIGYMALEY 883
++H D+KPSN+L+ L DFG++ L D FV T YM+ E
Sbjct: 121 -NVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFV------GTSTYMSPER 173
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKP 911
G+ + DV++ G+ ++E GK P
Sbjct: 174 IQGGKYTVKSDVWSLGISIIELALGKFP 201
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 3e-09
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
+G G +G VYKAR + G AVK+ + G F E ++K +H NI+
Sbjct: 17 VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYF---- 72
Query: 773 IGDFKALFKA-LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
G + + K + +EY GSL+ +Y ++ L I L+ L + +S
Sbjct: 73 -GSYLSREKLWICMEYCGGGSLQD-IY---HVTGPLSELQIAYVCRETLQGLAYLHSKGK 127
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YMALEYGSEGR 888
+H D+K +N+LL DN L+DFG+ +T T + + IG +MA E +
Sbjct: 128 MHRDIKGANILLTDNGDVKLADFGVAAKIT-----ATIAKRKSFIGTPYWMAPEVAA--- 179
Query: 889 VSTNG------DVYNFGVMLME 904
V NG D++ G+ +E
Sbjct: 180 VEKNGGYNQLCDIWAVGITAIE 201
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 4e-09
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG G G V AR + G +VAVK+ + + + + E +M+ +H+N++++
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL 88
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+G+ L+ + +E++ G+L + S L+ Q + V AL YL+ S VI
Sbjct: 89 VGE--ELW--VLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCYLH---SQGVI 139
Query: 833 HCDLKPSNVLLGDNMVAHLSDFG----ITKLLTREDQFVTQTQTPATIGYMALEYGSEGR 888
H D+K ++LL + LSDFG I+K + + V TP +MA E S
Sbjct: 140 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG---TPY---WMAPEVISRTP 193
Query: 889 VSTNGDVYNFGVMLMETFTGKKP 911
T D+++ G+M++E G+ P
Sbjct: 194 YGTEVDIWSLGIMVIEMVDGEPP 216
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 4e-09
Identities = 78/272 (28%), Positives = 116/272 (42%), Gaps = 20/272 (7%)
Query: 254 LQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIP 313
L N L ++ + + L NL L L N+ + P S L L+L N +P
Sbjct: 100 LNLNRLRSNISEL--LELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLP 156
Query: 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373
S NL NLK L L+ N L+ L LSN L +DLS N I + L
Sbjct: 157 SPLRNLPNLKNLDLSFNDLSDLP------KLLSNLSNLNNLDLSGNKISDL---PPEIEL 207
Query: 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDN 433
+L+ D+S+ N + + NL NL G L N L +P ++G L L+ L +N
Sbjct: 208 LSALEELDLSN-NSIIELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNN 265
Query: 434 KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWN 493
++ S + L + +LDLS N LS ++P L L L N L+++
Sbjct: 266 QI--SSISSLGSLTNLRELDLSGNSLSNALPL---IALLLLLLELLLNLLLTLKALELKL 320
Query: 494 LKDILYLNLSSNSLTGPLPLEIGNLKVLVKID 525
+L N+ SN T P + L+ L +
Sbjct: 321 NSILLNNNILSNGETS-SPEALSILESLNNLW 351
|
Length = 394 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 4e-09
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSIS-FCNWTGVTCD 49
D DAL A K+ + DP+ + +WN S S C+WTGVTCD
Sbjct: 3 DDRDALLAFKSSLNGDPSGALS-SWNPSSSDPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 6e-09
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH-RNIIK 766
F++ IG+G FG V+K I + + V A K D+E E I + I
Sbjct: 6 FTKLERIGKGSFGEVFKG-IDNRTQQVV---------AIKIIDLE-EAEDEIEDIQQEIT 54
Query: 767 IISCCSIGDFKALFKA--------LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVAS 818
++S C + + + +EY+ GS L + + D FQ ++ ++
Sbjct: 55 VLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILK 112
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY 878
L+YL+ S IH D+K +NVLL + L+DFG+ LT D + + T +
Sbjct: 113 GLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFW 167
Query: 879 MALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915
MA E + + D+++ G+ +E G+ P +++
Sbjct: 168 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 204
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 6e-09
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 19/205 (9%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
+G+GGFG V +++ G A K +++ + K E M ++ + I++ +S
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKG-----EQM-ALNEKKILEKVSSRF 54
Query: 773 IGDFKALFKA-----LALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFG 826
I F+ L + M G L+ ++Y+ + + + LE+L+
Sbjct: 55 IVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH-- 112
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
+++ DLKP NVLL D+ +SD G+ L T GYMA E
Sbjct: 113 -QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQG 168
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKP 911
+ D + G L E G+ P
Sbjct: 169 EVYDFSVDWFALGCTLYEMIAGRSP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 6e-09
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 713 LIGRGGFGSVYKARIQ----DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKI 767
++G G FG + + ++ + VA+ C + + F E + H NI+++
Sbjct: 12 ILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRL 71
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY-FG 826
+ G+ + EYM +G+L+ +L L Q + ++ +AS ++YL G
Sbjct: 72 EGVITRGNTMMI----VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG 127
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT-QTPATIGYMALEYGS 885
Y +H L VL+ ++V +S F + E + T + ++P + A E
Sbjct: 128 Y----VHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVL--WAAPEAIQ 181
Query: 886 EGRVSTNGDVYNFGVMLMETFT-GKKP 911
S+ DV++FG+++ E + G++P
Sbjct: 182 YHHFSSASDVWSFGIVMWEVMSYGERP 208
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 57.8 bits (139), Expect = 9e-09
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN---QQCGRAFKSFDVECEVMKSIRHRN 763
F++ IG G FG+VY AR ++ VA+K + +Q ++ E + ++ I+H N
Sbjct: 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVAS----A 819
I+ C + L +EY L S++ +L++ ++ +++A+ A
Sbjct: 87 SIEYKGCY----LREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAITHGA 134
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYM 879
L+ L + +S +IH D+K N+LL + L+DFG + + + FV TP +
Sbjct: 135 LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG---TPYWMAPE 191
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFN 917
+ EG+ DV++ G+ +E K P +FN
Sbjct: 192 VILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 226
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 1e-08
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 714 IGRGGFGSVYKARIQDGMEV-AVK------VFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
+G GGFG V +++ A+K + S E E+++ H I+K
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFS---EKEILEECNHPFIVK 57
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ + D K ++ + +EY G L L D + + V A EYL+
Sbjct: 58 LY--RTFKDKKYIY--MLMEYCLGGELWTILRDRGL-FDEYTARFYIACVVLAFEYLH-- 110
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
+ +I+ DLKP N+LL N L DFG K L + T TP Y+A E
Sbjct: 111 -NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTP---EYVAPEIILN 166
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKPTNE 914
+ D ++ G++L E TG+ P E
Sbjct: 167 KGYDFSVDYWSLGILLYELLTGRPPFGE 194
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 1e-08
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG G G V A G +VAVK + + + + E +M+ H N++ + +
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL 89
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+GD L+ + +E++ G+L + + ++ Q + + V AL YL+ + VI
Sbjct: 90 VGD--ELW--VVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVI 140
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H D+K ++LL + LSDFG +++E + T +MA E S T
Sbjct: 141 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKSLVGTPYWMAPEVISRLPYGTE 198
Query: 893 GDVYNFGVMLMETFTGKKPTNEIFNE 918
D+++ G+M++E G+ P FNE
Sbjct: 199 VDIWSLGIMVIEMIDGEPP---YFNE 221
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 1e-08
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 713 LIGRGGFGSVYKARIQDGME-VAVKVFN-QQCGRAFKSFDV--ECEVMKSIRHRNIIKII 768
+G G FG V+ R + A+KV + R + V E V+K + H II++
Sbjct: 8 TVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLF 67
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
+ D + L+ + +EY+P G L YL +S + ++ ALEYL+ S
Sbjct: 68 --WTEHDQRFLY--MLMEYVPGGELFSYLRNSGRFSNSTGLF-YASEIVCALEYLH---S 119
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE-YGSEG 887
+++ DLKP N+LL L+DFG K L D+ T TP Y+A E S+G
Sbjct: 120 KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR--DRTWTLCGTPE---YLAPEVIQSKG 174
Query: 888 RVSTNGDVYNFGVMLMETFTGKKP 911
+ D + G+++ E G P
Sbjct: 175 H-NKAVDWWALGILIYEMLVGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 1e-08
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 51/231 (22%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSFDV---------ECEVMKSIRHRN 763
IG G +G V A + G +VA+K + +FDV E ++++ +H N
Sbjct: 13 IGSGAYGVVCSAIDTRSGKKVAIK-------KIPHAFDVPTLAKRTLRELKILRHFKHDN 65
Query: 764 IIKI--ISCCSIGDFKALFKALALEYMPHGSLEKYLYSS--------NYILDIFQRLNIM 813
II I I DFK ++ + ++ M L ++S Y L +Q L
Sbjct: 66 IIAIRDILRPPGADFKDVY--VVMDLM-ESDLHHIIHSDQPLTEEHIRYFL--YQLLR-- 118
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR--EDQFVTQTQ 871
L+Y++ S VIH DLKPSN+L+ ++ + DFG+ + L+ + T+
Sbjct: 119 -----GLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTE 170
Query: 872 TPATIGYMALEYG-SEGRVSTNGDVYN----FGVMLM--ETFTGKKPTNEI 915
AT Y A E S +T D+++ F ML + F GK +++
Sbjct: 171 YVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQL 221
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 1e-08
Identities = 62/216 (28%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVF-----NQQCGRAFKSFDVECEVMKSIRHRNIIK 766
IG G G VYK R + G +AVK ++ R DV V+KS I+K
Sbjct: 22 EIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDV---VLKSHDCPYIVK 78
Query: 767 IISC--CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
C I D + +E M L+K L + + + + AL YL
Sbjct: 79 ---CYGYFITDSDVF---ICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLK 131
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG 884
+ VIH D+KPSN+LL + L DFGI+ L + + +T++ YMA E
Sbjct: 132 EKHG--VIHRDVKPSNILLDASGNVKLCDFGISGRLV-DSK--AKTRSAGCAAYMAPE-- 184
Query: 885 SEGRVSTN---------GDVYNFGVMLMETFTGKKP 911
R+ DV++ G+ L+E TG+ P
Sbjct: 185 ---RIDPPDPNPKYDIRADVWSLGISLVELATGQFP 217
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 2e-08
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 50/221 (22%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK-VF----NQQ-CGRAFKSFDVECEVM--KSIR-HRN 763
+G+G +G V+KA + VA+K +F N R F+ E+M + + H N
Sbjct: 15 LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFR------EIMFLQELGDHPN 68
Query: 764 IIKIISCCSIGDFKALFKA-------LALEYMP---HGSLEKYLYSSNYILDIFQRLNIM 813
I+K+++ + KA L EYM H + N + D+ +R IM
Sbjct: 69 IVKLLN---------VIKAENDKDIYLVFEYMETDLHAVIRA-----NILEDVHKRY-IM 113
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR---EDQFVTQT 870
+ AL+Y++ S VIH DLKPSN+LL + L+DFG+ + L+ + T
Sbjct: 114 YQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLT 170
Query: 871 QTPATIGYMALE--YGSEGRVSTNGDVYNFGVMLMETFTGK 909
AT Y A E GS R + D+++ G +L E GK
Sbjct: 171 DYVATRWYRAPEILLGST-RYTKGVDMWSVGCILGEMLLGK 210
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 2e-08
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 44/238 (18%)
Query: 711 NNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQ---------------QCGRAFKSFDVECE 754
+G G +G V KA G VA+K CG F + E +
Sbjct: 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLR-ELK 72
Query: 755 VMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMI 814
+M I+H NI+ ++ GDF L ++ M L+K + L Q I++
Sbjct: 73 IMNEIKHENIMGLVDVYVEGDFINL----VMDIM-ASDLKK-VVDRKIRLTESQVKCILL 126
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT----------KLLTRED 864
+ + L L+ Y +H DL P+N+ + + ++DFG+ L E
Sbjct: 127 QILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDET 183
Query: 865 QFVTQTQTP--ATIGYMALE--YGSEGRVSTNGDVYNFGVMLMETFTGKK---PTNEI 915
+ T T+ Y A E G+E + D+++ G + E TGK NEI
Sbjct: 184 MQRREEMTSKVVTLWYRAPELLMGAE-KYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240
|
Length = 335 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 3e-08
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 375 HSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNK 434
L+ ++S ++ G+IP +G++T+L L N+ NGSIP +LG+L L++L N
Sbjct: 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
Query: 435 LEGSIP 440
L G +P
Sbjct: 502 LSGRVP 507
|
Length = 623 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 3e-08
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 53/229 (23%)
Query: 713 LIGRGGFGSVYKARIQDGME--VAVK---VFNQQCGRAFKSFD-------VECEVMK-SI 759
+G G FG VYK R ++ + +A+K V N G+ + D E ++K +
Sbjct: 7 HLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQL 66
Query: 760 RHRNIIK----------------IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI 803
RH NI++ +I +G+ F +L + +
Sbjct: 67 RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGE---HFNSLKEK---KQRFTE-------- 112
Query: 804 LDIFQRL-NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862
+R+ NI + + AL YL+ ++H DL P+N++LG++ ++DFG+ K
Sbjct: 113 ----ERIWNIFVQMVLALRYLH--KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQP 166
Query: 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
E + T TI Y E DV+ FG +L + T + P
Sbjct: 167 ESKL---TSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 46/220 (20%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK---VFNQQCGRAFKSFDVECEVMKSIRHRNIIK--- 766
IGRG F VY+A + D VA+K +F +A + E +++K + H N+IK
Sbjct: 10 IGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLD 69
Query: 767 ----------IISCCSIGDFKALFKALALE--YMPHGSLEKYLYSSNYILDIFQRLNIMI 814
++ GD + K + +P ++ KY +
Sbjct: 70 SFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYF----------------V 113
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
+ SA+E+++ S V+H D+KP+NV + V L D G+ + + + T +
Sbjct: 114 QLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-----TTAAHS 165
Query: 875 TIG---YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+G YM+ E E + D+++ G +L E + P
Sbjct: 166 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 3e-08
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFN-----QQCGRAFKSFDVECEVMKSIRHRNIIK 766
+IGRG FG V+ R G A+KV ++ A E +++ I+K
Sbjct: 8 VIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAH--VRAERDILADADSPWIVK 65
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY-F 825
+ S D + L+ L +EYMP G L L + + R I ++ AL+ ++
Sbjct: 66 LY--YSFQDEEHLY--LVMEYMPGGDLMNLLIRKDVFPEETARFYIA-ELVLALDSVHKL 120
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858
G+ IH D+KP N+L+ + L+DFG+ K
Sbjct: 121 GF----IHRDIKPDNILIDADGHIKLADFGLCK 149
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 55.9 bits (134), Expect = 3e-08
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 708 FSENNLIGRGGFGSVYKA---RIQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRN 763
F++ IG+G FG V+K R Q VA+K+ + ++ + E V+
Sbjct: 6 FTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
+ K + D K + +EY+ GS L LD Q I+ ++ L+YL
Sbjct: 64 VTKYYGS-YLKDTKLW---IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYL 117
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY 883
+ S IH D+K +NVLL ++ L+DFG+ LT D + + T +MA E
Sbjct: 118 H---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEV 172
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915
+ + D+++ G+ +E G+ P +E+
Sbjct: 173 IKQSAYDSKADIWSLGITAIELAKGEPPHSEL 204
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 3e-08
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 38/177 (21%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVK---VFNQQCG------RAFKSFDVECEVMK 757
+ E IG G +G+VYKAR + G VA+K V + G R E ++K
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLR-------EIALLK 53
Query: 758 SIR---HRNIIKIISCCSIGDFKALFK-ALALEYMPHGSLEKYL-------YSSNYILDI 806
+ H NI++++ C K L E++ L YL I D+
Sbjct: 54 QLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHV-DQDLATYLSKCPKPGLPPETIKDL 112
Query: 807 FQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
++L +++L +S ++H DLKP N+L+ + ++DFG+ ++ + E
Sbjct: 113 MRQL------LRGVDFL---HSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 3e-08
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEV-----MKSIRHRNIIKI 767
IG G +G+VYKAR G VA+K Q EV +++ H NI+++
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL 67
Query: 768 ISCCSIGDFKALFK-ALALEYMPHGSLEKYL-------YSSNYILDIFQRLNIMIDVASA 819
+ C+ K L E++ L YL + I D+ ++
Sbjct: 68 MDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQF------LRG 120
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYM 879
L++L+ + ++H DLKP N+L+ L+DFG+ ++ + + + T T+ Y
Sbjct: 121 LDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQ---MALTPVVVTLWYR 174
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
A E + +T D+++ G + E F +KP
Sbjct: 175 APEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 205
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 3e-08
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 42/219 (19%)
Query: 713 LIGRGGFGSVYKARIQDG--------MEVAVK---VFNQQCGRAFKSFDVECEVMKSIRH 761
++G+GG+G V++ R G M+V K V NQ+ K+ E ++++++H
Sbjct: 3 VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKA---ERNILEAVKH 59
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNI-MIDVAS-- 818
I+ +I G L+ L LEY+ G L +L +R I M D A
Sbjct: 60 PFIVDLIYAFQTGG--KLY--LILEYLSGGELFMHL----------EREGIFMEDTACFY 105
Query: 819 ------ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT 872
ALE+L+ +I+ DLKP N+LL L+DFG+ K E VT T
Sbjct: 106 LSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT-VTHTFC 161
Query: 873 PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
TI YMA E D ++ G ++ + TG P
Sbjct: 162 -GTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPP 199
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 5e-08
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 706 DGFSENNLIGRGGFGSVYKARIQDGMEV-AVKVFNQ-----QCGRAFKSFDVECEVMKSI 759
+ F +IGRG FG V R + +V A+K+ ++ + AF F E ++M
Sbjct: 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAF--FWEERDIMAHA 100
Query: 760 RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVAS 818
I+++ + D K L+ + +EYMP G L + SNY I + + R +V
Sbjct: 101 NSEWIVQL--HYAFQDDKYLY--MVMEYMPGGDLVNLM--SNYDIPEKWARFYTA-EVVL 153
Query: 819 ALEYLY-FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ--TPAT 875
AL+ ++ G+ IH D+KP N+LL + L+DFG + T TP
Sbjct: 154 ALDAIHSMGF----IHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDY 209
Query: 876 IGYMALE-YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
I L+ G +G D ++ GV L E G P
Sbjct: 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 6e-08
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 712 NLIGRGGFGSVYKA-RIQDGMEVAVKV---FNQQ--CGRAFKSFDVECEVMKSIRHRNII 765
+ IG G +G V A G++VA+K F Q C R + E ++++ +H NII
Sbjct: 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLR----EIKILRRFKHENII 66
Query: 766 KI---ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD-----IFQRLNIMIDVA 817
I I S F ++ + E M L K + + + D ++Q L
Sbjct: 67 GILDIIRPPSFESFNDVY--IVQELME-TDLYKLIKTQHLSNDHIQYFLYQILR------ 117
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE-DQFVTQTQTPATI 876
L+Y++ S V+H DLKPSN+LL N + DFG+ ++ E D T+ AT
Sbjct: 118 -GLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATR 173
Query: 877 GYMALE--YGSEGRVSTNGDVYNFGVMLMETFTGK 909
Y A E S+G + D+++ G +L E + +
Sbjct: 174 WYRAPEIMLNSKG-YTKAIDIWSVGCILAEMLSNR 207
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 6e-08
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVK---VFNQQCGRAFKSFDVECEVMK 757
C + + IG+G FG V+KAR + VA+K + N++ G + E ++++
Sbjct: 8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALR-EIKILQ 66
Query: 758 SIRHRNIIKIISCCS-----IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNI 812
++H N++ +I C +K F L E+ H L L + N + + +
Sbjct: 67 LLKHENVVNLIEICRTKATPYNRYKGSF-YLVFEFCEH-DLAGLLSNKNVKFTLSEIKKV 124
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858
M + + L Y++ ++H D+K +N+L+ + + L+DFG+ +
Sbjct: 125 MKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLAR 167
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 7e-08
Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 37/279 (13%)
Query: 714 IGRGGFGS--VYKARIQDGMEVAVKVFNQQCGRAFKSFDV--ECEVMKSIRHRNIIKIIS 769
+G+G FG +Y+ R +D V K N + D E ++ ++H NII +
Sbjct: 8 LGKGAFGEATLYR-RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYN 66
Query: 770 CCSIGDFKALFKALALEYMPHGSL-EKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
D L + +EY G+L +K + + + L + + SA+ Y++
Sbjct: 67 --HFMDDNTLL--IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---K 119
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV-TQTQTPATIGYMALEYGSEG 887
++H D+K N+ L + L DFGI+K+L E T TP YM+ E
Sbjct: 120 AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPY---YMSPELCQGV 176
Query: 888 RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947
+ + D++ G +L E T K+ T + N L ++KIV G +
Sbjct: 177 KYNFKSDIWALGCVLYELLTLKR-TFDATN------------PLNLVVKIVQG---NYTP 220
Query: 948 IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986
+ S + ++ + PEKR A E++ + L
Sbjct: 221 V----VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPL 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 8e-08
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IG G G V A ++ G VAVK + + + + E +M+ +H N++++ +
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+GD L+ + +E++ G+L + + ++ Q + + V AL L+ + VI
Sbjct: 88 VGD--ELW--VVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLKALSVLH---AQGVI 138
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H D+K ++LL + LSDFG +++E + T +MA E S
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPE 196
Query: 893 GDVYNFGVMLMETFTGKKPTNEIFNE 918
D+++ G+M++E G+ P FNE
Sbjct: 197 VDIWSLGIMVIEMVDGEPP---YFNE 219
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 9e-08
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 32/209 (15%)
Query: 713 LIGRGGFGSVYKARIQD-GMEVAVKVF-NQQCGRAFKSFDV-ECEVMKSIRHRNIIKIIS 769
L+G G +G V K + ++ G VA+K F + + K + E ++K +RH N++ +I
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67
Query: 770 CCSIGDFKALFKALALEYMPH---GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
K L+ L E++ H LEKY LD + + + +E+ +
Sbjct: 68 VFR--RKKRLY--LVFEFVDHTVLDDLEKYPNG----LDESRVRKYLFQILRGIEFCH-- 117
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE---- 882
S +IH D+KP N+L+ + V L DFG + L + T AT Y A E
Sbjct: 118 -SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVG 174
Query: 883 ---YGSEGRVSTNGDVYNFGVMLMETFTG 908
YG D++ G ++ E TG
Sbjct: 175 DTKYGRA------VDIWAVGCLVTEMLTG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 83/351 (23%), Positives = 130/351 (37%), Gaps = 93/351 (26%)
Query: 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ 112
++ IS L S L NL L SL L+ N+ +I + + L L +N
Sbjct: 73 DLLSPSGISSLDGSEN----LLNLLPLPSLDLNLNRLRSNI-SELLELTNLTSLDLDNNN 127
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGN 172
++ +IP I + L+LS N +I +P + N
Sbjct: 128 IT-DIPPLIGLLKSNLKELDLSDN----------------KIES---------LPSPLRN 161
Query: 173 LTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL 232
L L+ L LSFN L ++P + NL NL L L
Sbjct: 162 LPNLKNLDLSFNDL--------------------------SDLPKLLSNLSNLNNLDLSG 195
Query: 233 NKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFI 292
NK+ +P EI +S ++ + L NNS+ + + +
Sbjct: 196 NKI-SDLPPEIELLSALEELDLSNNSII--------------------------ELLSSL 228
Query: 293 FNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLE 352
N LS LEL N +P + GNL NL+ L L+NN ++S +SSL + L
Sbjct: 229 SNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNN-------QISSISSLGSLTNLR 280
Query: 353 FIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIG 403
+DLS NS+ L ++ L + ++ + + L N I
Sbjct: 281 ELDLSGNSLSNALPLIALLLLL-LELLLNLLLTLKALELKLNSILLNNNIL 330
|
Length = 394 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 1e-07
Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 45/216 (20%)
Query: 714 IGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFD---VECEVMKSIRHRNIIKIIS 769
+G G FG V R + + A+K+ ++ K + E +++SIRH ++ +
Sbjct: 9 LGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYG 68
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMI------DVASALEYL 823
S D L+ L +EY+P G L +L S R + V ALEYL
Sbjct: 69 --SFQDDSNLY--LVMEYVPGGELFSHLRKSG-------RFPEPVARFYAAQVVLALEYL 117
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT--QTPATIGYMAL 881
+ S +++ DLKP N+LL + ++DFG K + + T T TP Y+A
Sbjct: 118 H---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRV----KGRTYTLCGTPE---YLAP 167
Query: 882 E------YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
E YG D + G+++ E G P
Sbjct: 168 EIILSKGYGKA------VDWWALGILIYEMLAGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 1e-07
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875
VA +E+L S IH DL N+LL +N V + DFG+ + + ++ +V +
Sbjct: 182 VARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 238
Query: 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
+ +MA E + +T DV++FGV+L E F+ G P
Sbjct: 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASP 275
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 1e-07
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKV--FNQQCGRAFKSFDVECEVMKSIRHR 762
D + + +G G + +VYK + + +G VA+KV ++ G F + E ++K ++H
Sbjct: 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIR-EASLLKGLKHA 63
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKY-------LYSSNYILDIFQRLNIMID 815
NI+ + + L EY+ H L +Y L+ N L +FQ L
Sbjct: 64 NIVLLHDIIHTKETLTL----VFEYV-HTDLCQYMDKHPGGLHPENVKLFLFQLLR---- 114
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL-----TREDQFVTQT 870
L Y++ Y ++H DLKP N+L+ D L+DFG+ + T ++ VT
Sbjct: 115 ---GLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLW 168
Query: 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTG 908
P + + EY ST D++ G + +E G
Sbjct: 169 YRPPDVLLGSTEY------STCLDMWGVGCIFVEMIQG 200
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 2e-07
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875
VA +E+L S IH DL N+LL +N V + DFG+ + + ++ +V +
Sbjct: 188 VAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244
Query: 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
+ +MA E + + DV++FGV+L E F+ G P
Sbjct: 245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 281
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 2e-07
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 804 LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
L L+ VA +E+L S +H DL NVLL + + DFG+ + + +
Sbjct: 234 LTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHD 290
Query: 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTL 922
+V++ T + +MA E + +T DV+++G++L E F+ G P GM
Sbjct: 291 SNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPY-----PGM-- 343
Query: 923 KHWVNDWLLISIMKIVDGSLLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKR---IN 977
IVD + + + + + V+++ ++C PEKR ++
Sbjct: 344 --------------IVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLH 389
Query: 978 AKEIVTRLL 986
+IV LL
Sbjct: 390 LSDIVESLL 398
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875
VA +E+L S IH DL N+LL +N V + DFG+ + + ++ +V +
Sbjct: 183 VARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239
Query: 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
+ +MA E + +T DV++FGV+L E F+ G P
Sbjct: 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASP 276
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 3e-07
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 714 IGRGGFGSVYKARIQDGME-VAVKVFN---QQCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G FG+VY A E VAVK + +Q ++ E + ++ ++H N I+
Sbjct: 29 IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDI----FQRLNIMIDVASALEYLYF 825
C K L +EY L S++ +L++ Q + I AL+ L +
Sbjct: 89 CY----LKEHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAITHGALQGLAY 136
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS 885
+S +IH D+K N+LL + L+DFG + + FV TP + +
Sbjct: 137 LHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG---TPYWMAPEVILAMD 193
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFN 917
EG+ DV++ G+ +E K P +FN
Sbjct: 194 EGQYDGKVDVWSLGITCIELAERKPP---LFN 222
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 3e-07
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 714 IGRGGFGSVYKARIQDGME-VAVK-VFNQQCGRAFKSFDV-ECEVMKSIRHRNIIKIISC 770
IG G +G+V+KA+ ++ E VA+K V S + E ++K ++H+NI+++
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP 830
D K L EY L+KY S N +D + M + L+ L F +S
Sbjct: 68 LH-SDKKL---TLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQL---LKGLAFCHSHN 119
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITK 858
V+H DLKP N+L+ N L+DFG+ +
Sbjct: 120 VLHRDLKPQNLLINKNGELKLADFGLAR 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
+G+GGFG V ++++ G A K ++ K + ++ + I++ ++
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDK------KRLKKKSGEKMALLEKEILEKVNSPF 54
Query: 773 IGDFKALFKA-----LALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMIDVASALEYLYFG 826
I + F++ L + M G L+ ++Y+ L++ + ++ + + +L+
Sbjct: 55 IVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH-- 112
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
S +++ D+KP NVLL D LSD G L T TQ T GYMA E E
Sbjct: 113 -SMDIVYRDMKPENVLLDDQGNCRLSDLG---LAVELKDGKTITQRAGTNGYMAPEILKE 168
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKP 911
S D + G + E G+ P
Sbjct: 169 EPYSYPVDWFAMGCSIYEMVAGRTP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 4e-07
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 127 FFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGL 186
F + L L G IP+ +S +L+ + LS N G IP +G++T LE L LS+N
Sbjct: 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSF 478
Query: 187 QGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEI 243
G+ IP +G L +L +L L N L G +PA +
Sbjct: 479 NGS-------------------------IPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 4e-07
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 714 IGRGGFGSVYKAR--IQDGMEVAVKVFNQQCGRAFKSFDVECEV-----MKSIRHRNIIK 766
IG G +G V+KAR G VA+K Q G EV +++ H N+++
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68
Query: 767 IISCCSIGDFKALFK-ALALEYMPHGSLEKYL-------YSSNYILDIFQRLNIMIDVAS 818
+ C++ K L E++ L YL + I D+ +L
Sbjct: 69 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQL-------- 119
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY 878
L L F +S V+H DLKP N+L+ + L+DFG+ ++ + + + T T+ Y
Sbjct: 120 -LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWY 175
Query: 879 MALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
A E + +T D+++ G + E F +KP
Sbjct: 176 RAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP 207
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 4e-07
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI 764
D F + +G G G V K G+ +A K+ + E+ +IR++ I
Sbjct: 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKL-------------IHLEIKPAIRNQII 47
Query: 765 --IKIISCCS----IGDFKALFK----ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMI 814
+K++ C+ +G + A + ++ +E+M GSL++ L + I + I I
Sbjct: 48 RELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILG-KISI 106
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL--TREDQFVTQTQT 872
V L YL + ++H D+KPSN+L+ L DFG++ L + + FV
Sbjct: 107 AVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 159
Query: 873 PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
T YM+ E + D+++ G+ L+E G+ P
Sbjct: 160 -GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYP 197
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 4e-07
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 713 LIGRGGFGSV-YKARIQDGMEVAVKVFN------QQCGRAFKSFDVECEVMKSIRHRNII 765
++G G G+V R+ DG AVKV + RA +V C + + +
Sbjct: 39 VLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRA--QAEVCC-----LLNCDFF 91
Query: 766 KIISCCSIGDF---------KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLN---IM 813
I+ C DF L AL L+Y G L + + S F+ +
Sbjct: 92 SIVKCHE--DFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLF 149
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT---REDQFVTQT 870
I V A+ +++ S +IH D+K +N+LL N + L DFG +K+ +D T
Sbjct: 150 IQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFC 206
Query: 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
TP Y+A E S D+++ GV+L E T K+P
Sbjct: 207 GTPY---YVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRP 244
|
Length = 496 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 5e-07
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 229 ALGLNK--LVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG 286
LGL+ L G IP +I + +Q + L NS+ G++ + +LE L L N F+G
Sbjct: 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNI-PPSLGSITSLEVLDLSYNSFNG 480
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLN 328
SIP + + L L L NS SG +P+ G R L R N
Sbjct: 481 SIPESLGQLTSLRILNLNGNSLSGRVPAALGG-RLLHRASFN 521
|
Length = 623 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 5e-07
Identities = 50/188 (26%), Positives = 67/188 (35%), Gaps = 53/188 (28%)
Query: 704 ATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-- 760
T F +IG G +G VYKAR + G VA+K+ + D E E+ +
Sbjct: 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDII-------EDEEEEIKEEYNIL 56
Query: 761 -----HRNIIKIISCCSIGDFKALFKA-----------LALEYMPHGS---LEKYLYSSN 801
H NI F F L +E GS L K L
Sbjct: 57 RKYSNHPNIA---------TFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKG 107
Query: 802 YILDIFQRLN------IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+RL I+ + L YL+ VIH D+K N+LL N L DFG
Sbjct: 108 ------KRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFG 158
Query: 856 ITKLLTRE 863
++ L
Sbjct: 159 VSAQLDST 166
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 53/247 (21%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIK---- 766
+G+G +G V R DG + +K N + R K+ + E +++ ++H NI+
Sbjct: 8 VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRES 67
Query: 767 ----------IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDV 816
++ C GD K + +P N +++ F + +
Sbjct: 68 WEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPE----------NQVVEWF------VQI 111
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATI 876
A AL+YL+ ++H DLK NV L + + D GI ++L E+Q + T
Sbjct: 112 AMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVL--ENQCDMASTLIGTP 166
Query: 877 GYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM- 935
YM+ E S + DV+ G + E TLKH N + S++
Sbjct: 167 YYMSPELFSNKPYNYKSDVWALGCCVYEM--------------ATLKHAFNAKDMNSLVY 212
Query: 936 KIVDGSL 942
+I++G L
Sbjct: 213 RIIEGKL 219
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 5e-07
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
F++ IG+G FG VYK EV A+K+ + + + E E+ + I+ I
Sbjct: 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLE--------EAEDEI-EDIQQE--IT 54
Query: 767 IISCCSIGDFKALFKA--------LALEYMPHGSLEKYL----YSSNYILDIFQRLNIMI 814
++S C + + + +EY+ GS L YI I +
Sbjct: 55 VLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR------ 108
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
++ L+YL+ S IH D+K +NVLL + L+DFG+ LT D + +
Sbjct: 109 EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVG 163
Query: 875 TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915
T +MA E + D+++ G+ +E G+ P +++
Sbjct: 164 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 204
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 5e-07
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQ-----QCGRAFKSFDVECEVMKSIRHRNIIK 766
+IGRG FG V R + +V A+K+ ++ + AF F E ++M +++
Sbjct: 50 VIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQ 107
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLN--IMIDVASALEYLY 824
+ C+ D K L+ + +EYMP G L + SNY D+ ++ +V AL+ ++
Sbjct: 108 LF--CAFQDDKYLY--MVMEYMPGGDLVNLM--SNY--DVPEKWAKFYTAEVVLALDAIH 159
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV---TQTQTPATIGYMAL 881
S +IH D+KP N+LL + L+DFG T + E V T TP I L
Sbjct: 160 ---SMGLIHRDVKPDNMLLDKHGHLKLADFG-TCMKMDETGMVRCDTAVGTPDYISPEVL 215
Query: 882 E-YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ G +G D ++ GV L E G P
Sbjct: 216 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 6e-07
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 713 LIGRGGFGSVYKARIQD-GMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIIS 769
+IGRGGFG VY R D G A+K +++ + ++ + +M S+ I
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
C + L+ M G L +L + R ++ LE+++ +
Sbjct: 61 CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRF-YATEIILGLEHMHNRF-- 117
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
V++ DLKP+N+LL ++ +SD G+ +++ + T GYMA E +G
Sbjct: 118 -VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGTA 172
Query: 890 -STNGDVYNFGVMLMETFTGKKP 911
++ D ++ G ML + G P
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 6e-07
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 47/217 (21%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECE-----------VMKSIRH 761
IG G +G VYKAR G VA+K D E E ++K + H
Sbjct: 8 IGEGTYGVVYKARNKLTGEVVALKKIR---------LDTETEGVPSTAIREISLLKELNH 58
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSS-------NYILDIFQRLNIMI 814
NI+K++ I L+ L E++ H L+K++ +S I +L
Sbjct: 59 PNIVKLLDV--IHTENKLY--LVFEFL-HQDLKKFMDASPLSGIPLPLIKSYLFQL---- 109
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
L+ L F +S V+H DLKP N+L+ L+DFG+ + + T T
Sbjct: 110 -----LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV 162
Query: 875 TIGYMALE--YGSEGRVSTNGDVYNFGVMLMETFTGK 909
T+ Y A E G + ST D+++ G + E T +
Sbjct: 163 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 8e-07
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 714 IGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDV-ECEVMKSIRHRNIIKIISCC 771
IG+G FG V + R +D + A+K K+ V EV ++ R ++ ++C
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIR-------KAHIVSRSEVTHTLAERTVLAQVNCP 53
Query: 772 SIGDFKALFKA-----LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
I K F++ L L ++ G L +L D+ + ++ ALE L+
Sbjct: 54 FIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGR-FDLSRARFYTAELLCALENLH-- 110
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPATIGYMALEYGS 885
VI+ DLKP N+LL L DFG+ KL + +D+ T TP Y+A E
Sbjct: 111 -KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPE---YLAPELLL 166
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFNEGMT 921
+ D + GV+L E TG P NE++ + +
Sbjct: 167 GHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ 207
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 9e-07
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 6/218 (2%)
Query: 467 FGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKV-LVKID 525
+L L +L L N L S I L ++ L+L +N++T +P IG LK L ++D
Sbjct: 89 LLNLLPLPSLDLNLNRLRSNISELL-ELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELD 146
Query: 526 FSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPV 585
S N +P+ + + +L+ L L +N L +P +L +L +L+LS N +S +P
Sbjct: 147 LSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPP 203
Query: 586 SLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQHT 645
+E LS L++L+LS N + + + N S NKL ++ ++ +
Sbjct: 204 EIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLS 263
Query: 646 RRKNTILLGIFLPLSTIFMIAVILLIARNRKRGRQQPN 683
+ + + + + + ++
Sbjct: 264 NNQISSISSLGSLTNLRELDLSGNSLSNALPLIALLLL 301
|
Length = 394 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 9e-07
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV 848
P + L + + L + VA+ +E+L S +H DL NVL+ + +
Sbjct: 221 PERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLICEGKL 277
Query: 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT- 907
+ DFG+ + + R+ ++++ T + +MA E +T DV++FG++L E FT
Sbjct: 278 VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTL 337
Query: 908 -----GKKPTNEIF 916
+ P NE F
Sbjct: 338 GGTPYPELPMNEQF 351
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 9e-07
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 20/229 (8%)
Query: 701 LCQATDGFSENNLIGRGGFGSVYKARIQDGM-----EVAVK-VFNQQCGRAFKSFDVECE 754
+ + D + ++L+ G FG ++ + D EV VK V + E
Sbjct: 1 IAISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESC 60
Query: 755 VMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-------LDIF 807
++ + H+NI+ I+ C + YM G+L+ +L L
Sbjct: 61 LLYGLSHQNILPILHVCIEDGEPPF---VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQ 117
Query: 808 QRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV 867
Q +++ I +A + YL+ VIH D+ N ++ + + ++D +++ L D
Sbjct: 118 QLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHC 174
Query: 868 TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEI 915
+ +MALE S+ DV++FGV+L E T G+ P EI
Sbjct: 175 LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI 223
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 62/294 (21%), Positives = 120/294 (40%), Gaps = 60/294 (20%)
Query: 714 IGRGGFGSVYKARIQD---------GMEVAV--KVFNQQCGRAFKSFDVECEVMKSIRHR 762
+G+G F ++YK ++ G EV+V KV R +F +M + H+
Sbjct: 3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSD-HRDSLAFFETASLMSQLSHK 61
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
+++K+ C + EY+ G L+ +L+ + + +L++ +ASAL Y
Sbjct: 62 HLVKLYGVCV-----RDENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHY 116
Query: 823 LYFGYSTPVIHCDLKPSNVLL-------GDNMVAHLSDFGI-TKLLTREDQFVTQTQTPA 874
L ++H ++ N+L+ G LSD GI +L+RE++ + P
Sbjct: 117 L---EDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREER---VERIP- 169
Query: 875 TIGYMALEY--GSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLL 931
++A E + ++ D ++FG L+E + G++P + + + +
Sbjct: 170 ---WIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY------- 219
Query: 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
D L D E + N+ +C P KR + + I+ L
Sbjct: 220 ------QDQHRLPMPDC----AE-----LANLINQCWTYDPTKRPSFRAILRDL 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 1e-06
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Query: 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVL 842
L L+Y+ G L +LY + + R+ I ++ AL++L+ +I+ D+K N+L
Sbjct: 82 LILDYVNGGELFTHLYQREHFTESEVRVYIA-EIVLALDHLH---QLGIIYRDIKLENIL 137
Query: 843 LGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY--GSEGRVSTNGDVYNFGV 900
L L+DFG++K E++ + TI YMA E G G D ++ GV
Sbjct: 138 LDSEGHVVLTDFGLSKEFLAEEEERAYSFC-GTIEYMAPEVIRGGSGGHDKAVDWWSLGV 196
Query: 901 MLMETFTGKKP 911
+ E TG P
Sbjct: 197 LTFELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 1e-06
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDV---ECEVMKSIRHRN 763
F + ++G+GGFG V +++ G A K ++ + K + E ++++ + +
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS-SNYILDIFQRLNIMIDVASALEY 822
++ + D AL L L M G L+ ++Y+ N + + L ++ LE
Sbjct: 62 VVNLAYAYETKD--AL--CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLED 117
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
L+ ++ DLKP N+LL D +SD G+ + + + T+GYMA E
Sbjct: 118 LH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRV---GTVGYMAPE 171
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ R + + D + G ++ E G+ P
Sbjct: 172 VLNNQRYTLSPDYWGLGCLIYEMIEGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 1e-06
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDV---ECEVMKSIRHRN 763
F + ++G+GGFG V +++ G A K ++ + K + E ++++ + R
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMIDVASALEY 822
++ + D AL L L M G L+ ++Y + + + ++ LE
Sbjct: 62 VVSLAYAYETKD--AL--CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED 117
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
L+ +++ DLKP N+LL D+ +SD G+ + E Q T T+GYMA E
Sbjct: 118 LH---QERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQ--TIKGRVGTVGYMAPE 171
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
R + + D + G +L E G+ P
Sbjct: 172 VVKNERYTFSPDWWALGCLLYEMIAGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 1e-06
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVK---VFNQQCGRAFKSFDVECEVMK 757
C + +G G FG VYKAR I+ G VA+K + N++ G + E +++K
Sbjct: 4 CSKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALR-EIKILK 62
Query: 758 SIRHRNIIKII------SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLN 811
++H N++ +I S +++ + YM H L L + + L Q
Sbjct: 63 KLKHPNVVPLIDMAVERPDKSKRKRGSVY--MVTPYMDH-DLSGLLENPSVKLTESQIKC 119
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856
M+ + + YL+ ++H D+K +N+L+ + + ++DFG+
Sbjct: 120 YMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGL 161
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 2e-06
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507
LDLSNN+L+ F L +L+ L L+ N L S+ P F L + L+LS N+L
Sbjct: 5 LDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 2e-06
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 714 IGRGGFGSVYKAR--IQDGMEVAVKVFNQQCGRAFKSFDV-ECEVMKSIRHRNIIKIISC 770
+G G + +VYK R + D + VA+K + + E ++K ++H NI+
Sbjct: 14 LGEGTYATVYKGRSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV----- 67
Query: 771 CSIGDFKALFKALAL--EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
++ D K+L L EY+ L++YL +++ N+ + + L L + +
Sbjct: 68 -TLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMH---NVKLFLFQLLRGLNYCHR 122
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITK-----LLTREDQFVTQTQTPATIGYMALEY 883
V+H DLKP N+L+ + L+DFG+ + T ++ VT P I + +Y
Sbjct: 123 RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDY 182
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGK 909
ST D++ G + E TG+
Sbjct: 183 ------STQIDMWGVGCIFYEMSTGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 2e-06
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 37/220 (16%)
Query: 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI 764
D F + +G G G V K + + G+ +A K+ + E+ +IR++ I
Sbjct: 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKL-------------IHLEIKPAIRNQII 51
Query: 765 --IKIISCCS----IGDFKALFK----ALALEYMPHGSLEKYLYSSNYI-LDIFQRLNIM 813
++++ C+ +G + A + ++ +E+M GSL++ L + I +I +++I
Sbjct: 52 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA 111
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL--TREDQFVTQTQ 871
V L YL + ++H D+KPSN+L+ L DFG++ L + + FV
Sbjct: 112 --VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---- 163
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
T YM+ E S D+++ G+ L+E G+ P
Sbjct: 164 --GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 19/205 (9%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVF---NQQCGRAFKSFDVECEVMKSIRHR-NIIKII 768
I +G FGSVY A+ G A+KV + + E +M + K+
Sbjct: 4 ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLY 63
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
D+ L+ L +EY+ G + + + + + + + +V +E L+
Sbjct: 64 YSFQSKDY--LY--LVMEYLNGGDCASLIKTLGGLPEDWAK-QYIAEVVLGVEDLH---Q 115
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR 888
+IH D+KP N+L+ L+DFG+++ +FV T Y+A E
Sbjct: 116 RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFV------GTPDYLAPETILGVG 169
Query: 889 VSTNGDVYNFGVMLMETFTGKKPTN 913
D ++ G ++ E G P +
Sbjct: 170 DDKMSDWWSLGCVIFEFLFGYPPFH 194
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 714 IGRGGFGSVYKARIQ-DGMEVAVKV--FNQQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
IG G FG +Y A+ + D +K + + ++ E ++ ++H NI+ +
Sbjct: 8 IGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFA- 66
Query: 771 CSIGDFKALFKALALEYMPHGSLEK-------YLYSSNYILDIFQRLNIMIDVASALEYL 823
S + LF + +EY G L K L+S + IL F + ++ L+++
Sbjct: 67 -SFQENGRLF--IVMEYCDGGDLMKRINRQRGVLFSEDQILSWF------VQISLGLKHI 117
Query: 824 YFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFGITKLLTREDQFV-TQTQTPATIGYMAL 881
+ ++H D+K N+ L N MVA L DFGI + L + T TP Y++
Sbjct: 118 H---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPY---YLSP 171
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV 926
E + D+++ G +L E T K P EG L V
Sbjct: 172 EICQNRPYNNKTDIWSLGCVLYELCTLKHPF-----EGNNLHQLV 211
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 2e-06
Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 29/234 (12%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVA---VKVFNQQCGRAFKSFDVECEVMK 757
C++ D + + N I G +G VY+AR + G VA +K+ ++ G S E ++
Sbjct: 1 CRSVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLR-EINILL 59
Query: 758 SIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVA 817
++H NI+ + + ++ + +EY+ H L+ + + + +M+ +
Sbjct: 60 KLQHPNIVTVKEVVVGSNLDKIY--MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLL 116
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP--AT 875
S + +L+ + ++H DLK SN+LL + + + DFG L RE + T T
Sbjct: 117 SGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFG----LAREYGSPLKPYTQLVVT 169
Query: 876 IGYMALE--YGSEGRVSTNGDVYN----FGVMLMET--FTGKKPTNE---IFNE 918
+ Y A E G ST D+++ F +L + F GK ++ IF
Sbjct: 170 LWYRAPELLLG-AKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKL 222
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 18/131 (13%)
Query: 805 DIFQRLN--IMI----------DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLS 852
D+F RL+ +M ++A AL++L+ S +I+ DLKP N+LL + L+
Sbjct: 84 DLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLT 140
Query: 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP- 911
DFG++K D T+ YMA E + + + D ++FGV++ E TG P
Sbjct: 141 DFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPF 198
Query: 912 TNEIFNEGMTL 922
+ E MT+
Sbjct: 199 QGKDRKETMTM 209
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 714 IGRGGFGSVYK--ARIQDGMEVAVKV--FNQQCGRAFKSFDVECEVMKSIRHRNII---K 766
+G G + +VYK +RI +G VA+KV + G F + E ++K ++H NI+
Sbjct: 13 LGEGSYATVYKGISRI-NGQLVALKVISMKTEEGVPFTAIR-EASLLKGLKHANIVLLHD 70
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKY-------LYSSNYILDIFQRLNIMIDVASA 819
II F EYM H L +Y L+ N L +FQ L
Sbjct: 71 IIHTKETLTF-------VFEYM-HTDLAQYMIQHPGGLHPYNVRLFMFQLLR-------G 115
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-----LTREDQFVTQTQTPA 874
L Y++ + ++H DLKP N+L+ L+DFG+ + T + VT P
Sbjct: 116 LAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPP 172
Query: 875 TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGK 909
+ A +Y S+ D++ G + +E G+
Sbjct: 173 DVLLGATDY------SSALDIWGAGCIFIEMLQGQ 201
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 3e-06
Identities = 71/309 (22%), Positives = 125/309 (40%), Gaps = 75/309 (24%)
Query: 712 NLIGRGGFGSVYKARIQD-GMEVAVKVFNQ------QCGRAFKSFDVECEVMKSIRHRNI 764
+ +G G +G V A G +VA+K ++ R ++ E ++K + H N+
Sbjct: 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYR----ELRLLKHMDHENV 76
Query: 765 IKIISC----CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLN------IMI 814
I ++ S+ DF+ ++ L M L + Q+L+ ++
Sbjct: 77 IGLLDVFTPASSLEDFQDVY--LVTHLM-GADLNNIVKC--------QKLSDDHIQFLVY 125
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
+ L+Y+ +S +IH DLKPSN+ + ++ + DFG+ + E T A
Sbjct: 126 QILRGLKYI---HSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE-----MTGYVA 177
Query: 875 TIGYMALEYG-SEGRVSTNGDVYNFGVMLMETFTGKK--PTNEIFNEGMTLKHWVNDWLL 931
T Y A E + + D+++ G ++ E TGK P ++ ++ L
Sbjct: 178 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ------------L 225
Query: 932 ISIMKIV---DGSLLS-------REDIQFVAKEQCMSF--VFNMAMECTVE--------S 971
IM +V D LL R IQ + + F VF+ A ++
Sbjct: 226 KRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD 285
Query: 972 PEKRINAKE 980
P+KRI A E
Sbjct: 286 PDKRITAAE 294
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 3e-06
Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 60/273 (21%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKS-FDV-----ECEVMKSIRHRNIIK 766
IGRG +G V A+ + +VA+K + AF + D E ++++ + H N+I
Sbjct: 13 IGRGAYGIVCSAKNSETNEKVAIK----KIANAFDNRIDAKRTLREIKLLRHLDHENVIA 68
Query: 767 IISCC---SIGDFKALFKALALEYMPHGSLEKYLYSSNYILD------IFQRLNIMIDVA 817
I F ++ + E M L + + SS + D ++Q L
Sbjct: 69 IKDIMPPPHREAFNDVY--IVYELM-DTDLHQIIRSSQTLSDDHCQYFLYQLLR------ 119
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
L+Y++ S V+H DLKPSN+LL N + DFG+ + + + F+T+ T
Sbjct: 120 -GLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYV--VTRW 173
Query: 878 YMALE-------YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930
Y A E Y T DV++ G + E G+KP +F G K +V+
Sbjct: 174 YRAPELLLNCSEYT------TAIDVWSVGCIFAELL-GRKP---LF-PG---KDYVHQLK 219
Query: 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNM 963
L I +++ GS S ED+ F+ E+ ++ ++
Sbjct: 220 L--ITELL-GS-PSEEDLGFIRNEKARRYIRSL 248
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 3e-06
Identities = 77/310 (24%), Positives = 123/310 (39%), Gaps = 76/310 (24%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK---VFNQQCGRAFKSFDV-ECEVMKSIRHRNIIKII 768
IG G +G VYK R + G VA+K + +++ G S + E ++K ++H NI+ +
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG--VPSTAIREISLLKELQHPNIVCLQ 65
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY---- 824
+ L+ L E++ L+KYL S +D YLY
Sbjct: 66 DV--LMQESRLY--LIFEFLSM-DLKKYLDSL--------PKGQYMDAELVKSYLYQILQ 112
Query: 825 ---FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL---TREDQFVTQTQTPATIGY 878
F +S V+H DLKP N+L+ + V L+DFG+ + R T T+ Y
Sbjct: 113 GILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR-----VYTHEVVTLWY 167
Query: 879 MALE--YGSEGRVSTNGDVYNFGVMLMETFTGK--------------------KPTNEIF 916
A E GS R ST D+++ G + E T K PT +++
Sbjct: 168 RAPEVLLGSP-RYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVW 226
Query: 917 NEGMTLKHWVN---DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPE 973
+L + N W S+ V L + + + K + P
Sbjct: 227 PGVTSLPDYKNTFPKWKKGSLRSAVKN--LDEDGLDLLEK-------------MLIYDPA 271
Query: 974 KRINAKEIVT 983
KRI+AK+ +
Sbjct: 272 KRISAKKALN 281
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 713 LIGRGGFGSVYKARIQD-GMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIIS 769
+IGRGGFG VY R D G A+K +++ + ++ + +M S+ I
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 770 CCSIGDFKALFK-ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
C S F K + L+ M G L +L +F + A + L ++
Sbjct: 61 CMSYA-FHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEAEMRFYAAEIILGLEHMHN 115
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR 888
V++ DLKP+N+LL ++ +SD G+ +++ + T GYMA E +G
Sbjct: 116 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGV 171
Query: 889 V-STNGDVYNFGVMLMETFTGKKP 911
++ D ++ G ML + G P
Sbjct: 172 AYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 4e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 545 LQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603
L+ L L N L +F L +LK L+LS NNL+ P + L L+ L+LS N L
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 4e-06
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 43/174 (24%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECE--------------VMKS 758
IG G +G V+K R ++ G VA+K F VE E ++K
Sbjct: 9 IGEGSYGVVFKCRNRETGQIVAIKKF------------VESEDDPVIKKIALREIRMLKQ 56
Query: 759 IRHRNIIKIISCCSIGDFKALFKA-LALEYMPH---GSLEKYLYSSNYILDIFQRLNIMI 814
++H N++ +I F+ K L EY H LEK + I+
Sbjct: 57 LKHPNLVNLIEV-----FRRKRKLHLVFEYCDHTVLNELEKNPRG----VPEHLIKKIIW 107
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
A+ F + IH D+KP N+L+ L DFG ++LT T
Sbjct: 108 QTLQAVN---FCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 5e-06
Identities = 62/235 (26%), Positives = 91/235 (38%), Gaps = 49/235 (20%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCG---RAFKSFDVECEVMKSIRHRNIIKII 768
LIG+GG G VY A VA+K + K F E ++ + H I+ +
Sbjct: 9 LIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68
Query: 769 SCCSIGDFKALFKALALEY-MPH--GSLEKYLYSSNYILDIFQR-----------LNIMI 814
S CS GD + Y MP+ G K L S + + + L+I
Sbjct: 69 SICSDGD--------PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH 120
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP- 873
+ + +EY++ S V+H DLKP N+LLG + D+G E++ +
Sbjct: 121 KICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDE 177
Query: 874 ---------------ATIGYMALE--YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
T YMA E G ST D+Y GV+L + T P
Sbjct: 178 RNICYSSMTIPGKIVGTPDYMAPERLLGVPASEST--DIYALGVILYQMLTLSFP 230
|
Length = 932 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 5e-06
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 804 LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
LD+ L VA +++L S IH D+ NVLL D VA + DFG+ + + +
Sbjct: 209 LDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMND 265
Query: 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
+V + + +MA E + + DV+++G++L E F+ GK P
Sbjct: 266 SNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSP 314
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 6e-06
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 44/222 (19%)
Query: 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDV---------ECE 754
T+ + + +G G FG V AR Q G VA+K + K F E +
Sbjct: 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIK-------KIMKPFSTPVLAKRTYRELK 61
Query: 755 VMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMI 814
++K +RH NII S I F + + + G+ L +S + F + +
Sbjct: 62 LLKHLRHENII---SLSDI--FISPLEDIYFVTELLGTDLHRLLTSRPLEKQFIQY-FLY 115
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
+ L+Y++ S V+H DLKPSN+L+ +N + DFG+ ++ Q P
Sbjct: 116 QILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARI-----------QDPQ 161
Query: 875 TIGYMALEYGSEGRV-------STNGDVYNFGVMLMETFTGK 909
GY++ Y + D+++ G + E GK
Sbjct: 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 7e-06
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 42/219 (19%)
Query: 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRA-FKSFDVECEVMKSIRHRNIIKIISCC 771
+G+G +GSVYK + G+ +A+K + + F +E +++ H+
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDIL----HK-------AV 57
Query: 772 S--IGDFKALFKA-----LALEYMPHGSLEKYLY---SSNYILDIFQRLNIMIDVASALE 821
S I DF F + +EYM GSL+K LY + + I V L+
Sbjct: 58 SPYIVDFYGAFFIEGAVYMCMEYMDAGSLDK-LYAGGVATEGIPEDVLRRITYAVVKGLK 116
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---Y 878
+L ++ +IH D+KP+NVL+ N L DFG++ L + +T IG Y
Sbjct: 117 FLKEEHN--IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS---LAKTN----IGCQSY 167
Query: 879 MALEYGSEGRVSTNG------DVYNFGVMLMETFTGKKP 911
MA E G + N DV++ G+ ++E G+ P
Sbjct: 168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYP 206
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 8e-06
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 23/192 (11%)
Query: 733 VAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI--IKIISCCS----IGDFKALFK----A 782
V KV ++ G + E+ +IR++ I ++++ C+ +G + A + +
Sbjct: 20 VVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79
Query: 783 LALEYMPHGSLEKYLYSSNYILD-IFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNV 841
+ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN+
Sbjct: 80 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 135
Query: 842 LLGDNMVAHLSDFGITKLL--TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFG 899
L+ L DFG++ L + + FV T YM+ E S D+++ G
Sbjct: 136 LVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGTHYSVQSDIWSMG 189
Query: 900 VMLMETFTGKKP 911
+ L+E G+ P
Sbjct: 190 LSLVEMAIGRYP 201
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 8e-06
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 714 IGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK---IIS 769
IG+G FG VY+ R +D + A+KV +++ A K EV +I RNI+ +
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKK------EVAHTIGERNILVRTLLDE 54
Query: 770 CCSIGDFKALFKA-----LALEYMPHGSLEKYLYSSNYILDIFQRLNIMI-DVASALEYL 823
I K F+ L +YM G L +L + R I ++ ALE+L
Sbjct: 55 SPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSE--DRAKFYIAELVLALEHL 112
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPATIGYMALE 882
+ +++ DLKP N+LL L DFG++K LT T T Y+A E
Sbjct: 113 H---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK---TTNTFCGTTEYLAPE 166
Query: 883 YGSEGRVSTNG-DVYNFGVMLMETFTGKKP 911
+ + T D ++ GV++ E G P
Sbjct: 167 VLLDEKGYTKHVDFWSLGVLVFEMCCGWSP 196
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 1e-05
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 714 IGRGGFGSVYKAR---IQDGMEVAVK----VFNQQ--CGRAFKSFDVECEVMKSIR-HRN 763
+G+G +G V AR + VA+K VF+++ RA + E ++++ R H+N
Sbjct: 8 LGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALR----ELKLLRHFRGHKN 63
Query: 764 IIKIISCCSI--GDFKALFKALALEYMPHGSLEKYLYSSNYILD------IFQRLNIMID 815
I + + G+F L+ L E M L + + S + D I+Q L
Sbjct: 64 ITCLYDMDIVFPGNFNELY--LYEELM-EADLHQIIRSGQPLTDAHFQSFIYQIL----- 115
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ---TQT 872
L+Y++ S V+H DLKP N+L+ + + DFG+ + + E+ T+
Sbjct: 116 --CGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFS-ENPGENAGFMTEY 169
Query: 873 PATIGYMALEYG-SEGRVSTNGDVYNFGVMLMETFTGKKP 911
AT Y A E S + DV++ G +L E G+KP
Sbjct: 170 VATRWYRAPEIMLSFQSYTKAIDVWSVGCILAE-LLGRKP 208
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 1e-05
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV-----ECEVMKSIR-HRNIIK 766
IG G F V KA+ + G A+K + FKS + E + ++ + H NI++
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCMKKH----FKSLEQVNNLREIQALRRLSPHPNILR 62
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+I + D K AL E M +L + + L + + M + +L++++
Sbjct: 63 LIEV--LFDRKTGRLALVFELM-DMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH-- 117
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ H D+KP N+L+ D+++ L+DFG
Sbjct: 118 -RNGIFHRDIKPENILIKDDIL-KLADFG 144
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 1e-05
Identities = 65/226 (28%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRA---FKSFDVECEVM-KSIRHRNIIKII 768
IG+G FG V A+ DG AVKV ++ K E V+ K+++H ++ +
Sbjct: 3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
D K F L+Y+ G L +L + R ++ASAL YL+ S
Sbjct: 63 YSFQTAD-KLYF---VLDYVNGGELFFHLQRERSFPEPRARF-YAAEIASALGYLH---S 114
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPATIGYMALEYGSEG 887
+I+ DLKP N+LL L+DFG+ K + T TP Y+A E +
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPE---YLAPEVLRKQ 171
Query: 888 RVSTNGDVYNFGVMLMETFTGKKP-----TNE----IFNEGMTLKH 924
D + G +L E G P T E I N+ + LK
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP 217
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 1e-05
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 713 LIGRGGFGSVYKARIQDGMEV----AVKVFNQ----QCGRAFKSFDVECEVMKSIRHRNI 764
++G G +G V+ R G + A+KV + Q + + E +V++ IR
Sbjct: 7 VLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 66
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMI-DVASALEYL 823
+ + D K L L+Y+ G L +L + Q + I ++ ALE+L
Sbjct: 67 LVTLHYAFQTDTKL---HLILDYINGGELFTHLSQRERFKE--QEVQIYSGEIVLALEHL 121
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA-----TIGY 878
+ +I+ D+K N+LL N L+DFG++K +F A TI Y
Sbjct: 122 H---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK------EFHEDEVERAYSFCGTIEY 172
Query: 879 MALEY--GSEGRVSTNGDVYNFGVMLMETFTGKKP 911
MA + G +G D ++ GV++ E TG P
Sbjct: 173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 1e-05
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 712 NLIGRGGFGSVYKARIQDGME-VAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI--- 767
N+IG G FG VY+A D E VA+K Q +K + E +MK++ H NII +
Sbjct: 72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQD--PQYK--NRELLIMKNLNHINIIFLKDY 127
Query: 768 -ISCCSIGDFKALFKALALEYMPHGSLEKYL--YS-SNYILDIFQRLNIMIDVASALEYL 823
+ C + K +F + +E++P ++ KY+ Y+ +N+ L +F + AL Y+
Sbjct: 128 YYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI 186
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITKLL 860
+S + H DLKP N+L+ N L DFG K L
Sbjct: 187 ---HSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL 221
|
Length = 440 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 1e-05
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 713 LIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVEC-----EVMKSIRHRNIIK 766
++G+G FG V AR+ + G AVKV + + DVEC ++ R+ +
Sbjct: 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDV--ILQDDDVECTMTEKRILSLARNHPFLT 59
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ CC + F +E++ G L ++ S + R ++ SAL +L+
Sbjct: 60 QLYCCFQTPDRLFF---VMEFVNGGDLMFHIQKSRRFDEARARF-YAAEITSALMFLH-- 113
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
+I+ DLK NVLL L+DFG+ K T + T Y+A E E
Sbjct: 114 -DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KTTSTFCGTPDYIAPEILQE 170
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKP 911
+ D + GV+L E G P
Sbjct: 171 MLYGPSVDWWAMGVLLYEMLCGHAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 2e-05
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 37/233 (15%)
Query: 688 PQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAF 746
P ++W+ S E+ +G G FG V A+ + G A+K ++
Sbjct: 10 PDTSSWK-LSDFEM---------GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKM 59
Query: 747 KSFD---VECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSS--- 800
K E ++ + H I+ ++ CS D ++ LE++ G L +L +
Sbjct: 60 KQVQHVAQEKSILMELSHPFIVNMM--CSFQDENRVY--FLLEFVVGGELFTHLRKAGRF 115
Query: 801 -NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859
N + + ++ A EYL+ S +I+ DLKP N+LL + ++DFG K
Sbjct: 116 PNDVAKFYH-----AELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKK 167
Query: 860 LTREDQFVTQTQTPATIGYMALEY-GSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ D+ T TP Y+A E S+G D + GV+L E G P
Sbjct: 168 VP--DRTFTLCGTPE---YLAPEVIQSKGH-GKAVDWWTMGVLLYEFIAGYPP 214
|
Length = 329 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-05
Identities = 52/264 (19%), Positives = 88/264 (33%), Gaps = 48/264 (18%)
Query: 271 LPNLEELYLWGNHFSGSIPNFIFNA----SKLSRLELQKN------SFSGFIPSTFGNLR 320
L L+ L L GN + +A L L L N +
Sbjct: 22 LLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81
Query: 321 NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID---GILSRKSVGNLSHSL 377
L+ L L++N L L SL L+ + L++N + L K + +L +L
Sbjct: 82 GLQELDLSDNALGPDGCG--VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL 139
Query: 378 KIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG 437
+ + + G+ E + L + L+ L +N +
Sbjct: 140 EKLVLGRNRLEGASCEALAKA--------------------LRANRDLKELNLANNGIGD 179
Query: 438 SIPDEVCRLAKVYQ----LDLSNNKL----SGSIPACFGDLASLRNLSLASNELISVIPS 489
+ + K LDL+NN L + ++ L SL L+L N L +
Sbjct: 180 AGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239
Query: 490 TFWN-----LKDILYLNLSSNSLT 508
+ +L L+LS N +T
Sbjct: 240 ALASALLSPNISLLTLSLSCNDIT 263
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-05
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQ-----QCGRAFKSFDVECEVMKSIRHRNIIK 766
+IGRG FG V R + +V A+K+ ++ + AF F E ++M +++
Sbjct: 50 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQ 107
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYF 825
+ + D + L+ + +EYMP G L + SNY + + + R +V AL+ ++
Sbjct: 108 LFY--AFQDDRYLY--MVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH- 159
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ--TPATIGYMALE- 882
S IH D+KP N+LL + L+DFG + +E T TP I L+
Sbjct: 160 --SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 217
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
G +G D ++ GV L E G P
Sbjct: 218 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 63/280 (22%), Positives = 105/280 (37%), Gaps = 53/280 (18%)
Query: 721 SVYKARIQDGMEVAVKVF---NQQCGRAFKSFDVECEVMKSIRHRNIIKII--------S 769
S+YK I + EV ++ F ++ + E + ++ I NI+KI
Sbjct: 35 SIYKG-IFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDD 93
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
+ +L LEY G L + L L +L++ ID L LY +
Sbjct: 94 LPRL--------SLILEYCTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNK 144
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY----MALEYGS 885
P + +L + L+ +N + G+ K+L+ + + Y M + S
Sbjct: 145 P--YKNLTSVSFLVTENYKLKIICHGLEKILS-----SPPFKNVNFMVYFSYKMLNDIFS 197
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945
E + D+Y+ GV+L E FTGK P E +T K + L+
Sbjct: 198 E--YTIKDDIYSLGVVLWEIFTGKIPF-----ENLTTKEIYD--------------LIIN 236
Query: 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
++ C + + CT KR N KEI+ L
Sbjct: 237 KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNL 276
|
Length = 283 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 714 IGRGGFG---SVYKARIQDGMEVAVK----VFNQ--QCGRAFKSFDVECEVMKSIRHRNI 764
IG G FG SV R DG VA+K VF C R F+ + C +H N+
Sbjct: 8 IGYGAFGVVWSVTDPR--DGKRVALKKMPNVFQNLVSCKRVFRELKMLC----FFKHDNV 61
Query: 765 ---IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821
+ I+ I F+ ++ + E M L K + S + ++ + + L+
Sbjct: 62 LSALDILQPPHIDPFEEIY--VVTELM-QSDLHKIIVSPQPLSSDHVKV-FLYQILRGLK 117
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
YL+ S ++H D+KP N+L+ N V + DFG+ + + D+ TQ T Y A
Sbjct: 118 YLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEEPDESKHMTQEVVTQYYRAP 173
Query: 882 E--YGSEGRVSTNGDVYNFGVMLMETFTGK 909
E GS ++ D+++ G + E +
Sbjct: 174 EILMGSR-HYTSAVDIWSVGCIFAELLGRR 202
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 3e-05
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 714 IGRGGFGSVYKARIQDGME-VAVKVFNQQCGRAFKSFDV-ECEVMKSIRHRNIIKIISCC 771
+G G + +VYK R + E VA+K + S + E +MK ++H NI+++
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI 67
Query: 772 SIGDFKALFKALALEYMPHGSLEKYL--YSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
+ K + L EYM L+KY+ + LD + + L+ + F +
Sbjct: 68 HTEN-KLM---LVFEYM-DKDLKKYMDTHGVRGALDPNTVKSFTYQL---LKGIAFCHEN 119
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLL-----TREDQFVTQTQTPATIGYMALEYG 884
V+H DLKP N+L+ L+DFG+ + T ++ V T+ Y A +
Sbjct: 120 RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV-------TLWYRAPDVL 172
Query: 885 SEGRV-STNGDVYNFGVMLMETFTGK 909
R ST+ D+++ G ++ E TG+
Sbjct: 173 LGSRTYSTSIDIWSVGCIMAEMITGR 198
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 3e-05
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVK-VFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G G G V+ A D VAVK + ++ K E ++++ + H NI+K+
Sbjct: 13 LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVL 71
Query: 772 SIG------DFKALFKALAL----EYMP---HGSLEKYLYSSNYI-LDIFQRLNIMIDVA 817
D +L + ++ EYM LE+ S + L ++Q L
Sbjct: 72 GPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLR------ 125
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLSDFGITKLL 860
L+Y++ S V+H DLKP+NV + +++V + DFG+ +++
Sbjct: 126 -GLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIV 165
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 3e-05
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 804 LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
LD L+ VA + +L S IH DL N+LL + + DFG+ + + +
Sbjct: 211 LDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 267
Query: 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
+V + + +MA E + DV+++G++L E F+ G P
Sbjct: 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSP 316
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 3e-05
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 23/211 (10%)
Query: 713 LIGRGGFGSVYKARIQDGMEV----AVKVFNQ----QCGRAFKSFDVECEVMKSIRHRNI 764
++G G +G V+ R G + A+KV + Q + + E V++ +R
Sbjct: 7 VLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPF 66
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
+ + + K L L+Y+ G + +LY + + R ++ ALE+L+
Sbjct: 67 LVTLHYAFQTEAKL---HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSG-EIILALEHLH 122
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY- 883
+++ D+K N+LL L+DFG++K E++ T + TI YMA E
Sbjct: 123 ---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFC-GTIEYMAPEII 178
Query: 884 ---GSEGRVSTNGDVYNFGVMLMETFTGKKP 911
G G+ D ++ G+++ E TG P
Sbjct: 179 RGKGGHGKAV---DWWSLGILIFELLTGASP 206
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 5e-05
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 42/178 (23%)
Query: 707 GFSENNLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQCGRAFKSFDV--------ECEV 755
+ IGRG +G VYKA+ + DG E A+K F + K E +
Sbjct: 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKF-----KGDKEQYTGISQSACREIAL 55
Query: 756 MKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLE--KYLYSSN--YILD------ 805
++ ++H N++ ++ K+++ L +Y H + K+ + I
Sbjct: 56 LRELKHENVVSLVEVFLEHADKSVY--LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSL 113
Query: 806 IFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL-GDNM---VAHLSDFGITKL 859
++Q LN + YL +S V+H DLKP+N+L+ G+ V + D G+ +L
Sbjct: 114 LWQILN-------GVHYL---HSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARL 161
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 5e-05
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFD---VECEVMKSIRHRNIIKIIS 769
+G+GGFG V +++ G A K N++ + K ++ VE ++ + R I+ +
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSL-- 58
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFG 826
+ L L + M G L ++Y+ N + + S LE+L+
Sbjct: 59 AYAFQTKTDL--CLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH-- 114
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT-KLLTREDQFVTQTQTPATIGYMALEY-- 883
+I+ DLKP NVLL ++ +SD G+ +L + + TP G+MA E
Sbjct: 115 -QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTP---GFMAPELLQ 170
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKP 911
G E S D + GV L E + P
Sbjct: 171 GEEYDFSV--DYFALGVTLYEMIAARGP 196
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 5e-05
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 714 IGRGGFGSVYKAR--IQDGMEVAVKVFNQQCGRAFKSFDV-ECEVMKSIRHRNIIKIISC 770
+G G + +V+K R + + + VA+K + + E ++K ++H NI+
Sbjct: 14 LGEGTYATVFKGRSKLTENL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV----- 67
Query: 771 CSIGDFKALFKALAL--EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
++ D K+L L EY+ L++Y+ I+ + N+ I + L L + +
Sbjct: 68 -TLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMH---NVKIFLYQILRGLAYCHR 122
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITK-----LLTREDQFVTQTQTPATIGYMALEY 883
V+H DLKP N+L+ + L+DFG+ + T ++ VT P + + EY
Sbjct: 123 RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEY 182
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGK 909
ST D++ G + E +G+
Sbjct: 183 ------STQIDMWGVGCIFFEMASGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 6e-05
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 25/100 (25%)
Query: 164 GGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLR 223
G IP +I L L+ + LS N ++G IP +G++
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRG-------------------------NIPPSLGSIT 466
Query: 224 NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL 263
+LEVL L N G IP + +++++ + L NSLSG +
Sbjct: 467 SLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
|
Length = 623 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 6e-05
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 273 NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHL 332
NL+ L L N + L L+L N+ + P F L +L+ L L+ N+L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 6e-05
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVEC-EVMKSI-----RHRNII 765
++G+G FG V A ++ E+ AVKV + + DVEC K + +H +
Sbjct: 2 VLGKGSFGKVLLAELKGTDELYAVKVLKK--DVILQDDDVECTMTEKRVLALAGKHPFLT 59
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
++ SC D LF +EY+ G L ++ S D + ++ L++L+
Sbjct: 60 QLHSCFQTKD--RLF--FVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLH- 113
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS 885
+I+ DLK NVLL ++DFG+ K VT + T Y+A E S
Sbjct: 114 --ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VTTSTFCGTPDYIAPEILS 169
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKP 911
D + GV+L E G+ P
Sbjct: 170 YQPYGPAVDWWALGVLLYEMLAGQSP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 6e-05
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 713 LIGRGGFGSVYKA-RIQDGMEVAVKVFNQQC---GRAFKSFDVECEVM-KSIRHRNIIKI 767
+IG+G FG V A R DG AVKV ++ + E V+ K+++H ++ +
Sbjct: 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGL 61
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
S + L+ L+Y+ G L +L L+ R +VASA+ YL+
Sbjct: 62 HY--SFQTAEKLY--FVLDYVNGGELFFHLQRERCFLEPRARF-YAAEVASAIGYLH--- 113
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPATIGYMALEYGSE 886
S +I+ DLKP N+LL L+DFG+ K + E+ T TP Y+A E +
Sbjct: 114 SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPE---YLAPEVLRK 170
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKP 911
D + G +L E G P
Sbjct: 171 EPYDRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 6e-05
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 713 LIGRGGFGSVYKA-RIQDGMEVAVKVFNQQC---GRAFKSFDVECEVM-KSIRHRNIIKI 767
+IG+G FG V A R DG AVKV ++ + K E V+ K+++H ++ +
Sbjct: 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGL 61
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ K F L+++ G L +L + R ++ASAL YL+
Sbjct: 62 HYSFQTTE-KLYF---VLDFVNGGELFFHLQRERSFPEPRARFYAA-EIASALGYLH--- 113
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPATIGYMALEYGSE 886
S +++ DLKP N+LL L+DFG+ K + + D T TP Y+A E +
Sbjct: 114 SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPE---YLAPEVIRK 170
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKP 911
D + G +L E G P
Sbjct: 171 QPYDNTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 6e-05
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 61/224 (27%)
Query: 714 IGRGGFGSV---YKARIQDGMEVAVKVFNQQCGRAFKSF------DVECEVMKSIRHRNI 764
+G G +GSV Y R++ +VAVK + R F+S E ++K ++H N+
Sbjct: 23 VGSGAYGSVCSAYDTRLRQ--KVAVK----KLSRPFQSLIHARRTYRELRLLKHMKHENV 76
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEK----YLYSSNYILDI-----FQRL---NI 812
I ++ + P S+E YL ++ D+ Q+L ++
Sbjct: 77 IGLLDV----------------FTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSDEHV 120
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT 872
+ L L + +S +IH DLKPSNV + ++ + DFG+ + Q
Sbjct: 121 QFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR----------QADD 170
Query: 873 PATIGYMALEYGSEGRVSTNG-------DVYNFGVMLMETFTGK 909
T GY+A + + N D+++ G ++ E GK
Sbjct: 171 EMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 714 IGRGGFGSVYKA---RIQDG-----MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNII 765
+G+G F ++K + D EV +KV ++ +SF +M + H++++
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
C GD + + EY+ GSL+ YL + +++I +L + +A AL +L
Sbjct: 63 LNYGVCVCGDESIMVQ----EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFL-- 116
Query: 826 GYSTPVIHCDLKPSNVLL---GDNMVAH-----LSDFGITKLLTREDQFVTQTQTPATIG 877
+ H ++ NVLL D + LSD GI+ + ++ + + I
Sbjct: 117 -EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLER------IP 169
Query: 878 YMALEYGSEGR-VSTNGDVYNFGVMLMETFTG-KKPTN 913
++ E + +S D ++FG L E F+G KP +
Sbjct: 170 WVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 9e-05
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 297 KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDL 356
L L+L N + F L NLK L L+ N+LTS++ E + S L +DL
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPE-----AFSGLPSLRSLDL 55
Query: 357 SSNSI 361
S N++
Sbjct: 56 SGNNL 60
|
Length = 60 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 9e-05
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 713 LIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFD---VECEVMKSIRHRNIIKII 768
L+G+G FG V R + G A+K+ ++ A E V+++ RH + +
Sbjct: 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 61
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
D + F +EY G L +L + R ++ SALEYL+ S
Sbjct: 62 YAFQTHD-RLCF---VMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH---S 113
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPATIGYMALEYGSEG 887
V++ D+K N++L + ++DFG+ K ++ T TP + LE G
Sbjct: 114 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 173
Query: 888 RVSTNGDVYNFGVMLMETFTGKKP 911
R D + GV++ E G+ P
Sbjct: 174 RAV---DWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 9e-05
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK-VFNQQCGRAFKSFDV-ECEVMKSIRHRNIIKIISC 770
IG G +G VYKAR G VA+K + + S + E ++K + H NI++++
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDV 66
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP 830
+ L+ L E++ L+KY+ SS L I + L+ + + +S
Sbjct: 67 --VHSENKLY--LVFEFLDL-DLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSHR 119
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGI 856
V+H DLKP N+L+ L+DFG+
Sbjct: 120 VLHRDLKPQNLLIDREGALKLADFGL 145
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 1e-04
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 472 SLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531
+L++L L++N L + F L ++ L+LS N+LT P L L +D S NN
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 1e-04
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDV-ECEVMKSIRHRNIIKIISCC 771
+G G + +V+K R + VA+K + + E ++K+++H NI+
Sbjct: 13 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIV------ 66
Query: 772 SIGDFKALFKALAL--EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
++ D + L L EY+ L++YL + ++ + N+ I + L L + +
Sbjct: 67 TLHDIIHTERCLTLVFEYL-DSDLKQYLDNCGNLMSMH---NVKIFMFQLLRGLSYCHKR 122
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITK-----LLTREDQFVTQTQTPATIGYMALEYG 884
++H DLKP N+L+ + L+DFG+ + T ++ VT P + + EY
Sbjct: 123 KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEY- 181
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGK 909
ST D++ G +L E TG+
Sbjct: 182 -----STPIDMWGVGCILYEMATGR 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 31/207 (14%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKV--FNQQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+G G + +VYK R G VA+K + G F + E ++K ++H NI+
Sbjct: 13 LGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIR-EASLLKDLKHANIV----- 66
Query: 771 CSIGDFKALFKALAL--EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
++ D K L L EY+ L++Y+ L + N+ + + L L + +
Sbjct: 67 -TLHDIIHTKKTLTLVFEYL-DTDLKQYMDDCGGGLSMH---NVRLFLFQLLRGLAYCHQ 121
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGI-------TKLLTREDQFVTQTQTPATIGYMAL 881
V+H DLKP N+L+ + L+DFG+ +K T ++ VT P + +
Sbjct: 122 RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGST 179
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTG 908
EY ST+ D++ G + E TG
Sbjct: 180 EY------STSLDMWGVGCIFYEMATG 200
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 2e-04
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 521 LVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNL 579
L +D S N + + A G+ +L+ L L N L P++F L SL+SL+LS NNL
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVFNQQCGRAFKSF------DVECEVMKSIRHRNIIK 766
+G G +GSV A + G+ VAVK + R F+S E ++K ++H N+I
Sbjct: 25 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 80
Query: 767 IISCCSIG-DFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
++ + + + ++ L + D Q L + + L+Y++
Sbjct: 81 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH- 137
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS 885
S +IH DLKPSN+ + ++ + DFG+ + E GY+A +
Sbjct: 138 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----------MTGYVATRWYR 184
Query: 886 EGRVSTNG-------DVYNFGVMLMETFTGK 909
+ N D+++ G ++ E TG+
Sbjct: 185 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 2e-04
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 713 LIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFD---VECEVMKSIRHRNIIKII 768
L+G+G FG V R + G A+K+ ++ A E V+K+ RH + +
Sbjct: 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLK 61
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
D + F +EY+ G L +L + R ++ SAL+YL+ G
Sbjct: 62 YSFQTKD-RLCF---VMEYVNGGELFFHLSRERVFSEDRTRF-YGAEIVSALDYLHSG-- 114
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPATIGYMALEYGSEG 887
+++ DLK N++L + ++DFG+ K +T T TP + LE G
Sbjct: 115 -KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYG 173
Query: 888 RVSTNGDVYNFGVMLMETFTGKKP 911
R D + GV++ E G+ P
Sbjct: 174 RAV---DWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 36/216 (16%)
Query: 713 LIGRGGFGSVYKA-RIQDGMEVAVKVF---NQQCGRAFKSFDVECEVMKSIRHRNIIKII 768
L+GR + + A R D E V F N + A+ ++ C + + H I+K
Sbjct: 74 LVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHC--LAACDHFGIVK-- 129
Query: 769 SCCSIGDFKALFKAL-ALEYMPHGSLEKYLYSSNYILDIFQRLN------------IMID 815
DFK+ K L +EY G L K I QRL +
Sbjct: 130 ---HFDDFKSDDKLLLIMEYGSGGDLNK---------QIKQRLKEHLPFQEYEVGLLFYQ 177
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875
+ AL+ ++ S ++H DLK +N+ L + L DFG +K + + T
Sbjct: 178 IVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGT 234
Query: 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
Y+A E R S D+++ GV+L E T +P
Sbjct: 235 PYYLAPELWERKRYSKKADMWSLGVILYELLTLHRP 270
|
Length = 478 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 2e-04
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 701 LCQATDGFSENNLIGRGGFGSVYK-ARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI 759
L TD + IG+G +G VYK +DG AVK+ + + + E +++S+
Sbjct: 17 LGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDP-ISDVDEEIEAEYNILQSL 75
Query: 760 -RHRNIIKIISCCSIGDFKALFKA---------LALEYMPHGSLEKYLYSSNYILDIFQR 809
H N++K + +KA L LE GS+ + + +L QR
Sbjct: 76 PNHPNVVKF--------YGMFYKADKLVGGQLWLVLELCNGGSVTELVKG---LLICGQR 124
Query: 810 LN---IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED-Q 865
L+ I + AL L ++ +IH D+K +N+LL L DFG++ LT +
Sbjct: 125 LDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR 184
Query: 866 FVTQTQTPATIG--YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915
T TP + +A E + DV++ G+ +E G P ++
Sbjct: 185 RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 32/217 (14%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISC 770
L+G G +G VYK R ++ G A+KV + G + E ++K HRNI
Sbjct: 13 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATY--- 68
Query: 771 CSIGDFKALFKA----------LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASAL 820
+ A K L +E+ GS+ + N + + I L
Sbjct: 69 -----YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREIL 121
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT----KLLTREDQFVTQTQTPATI 876
L + VIH D+K NVLL +N L DFG++ + + R + F+ TP +
Sbjct: 122 RGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIG---TPYWM 178
Query: 877 G--YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+A + + D+++ G+ +E G P
Sbjct: 179 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 215
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 19/206 (9%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVECEVMK------SIRHRNII 765
++G+G FG V A ++ EV A+KV + + DV+C + + + +H +
Sbjct: 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDV--ILQDDDVDCTMTEKRILALAAKHPFLT 59
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
+ C D LF +EY+ G L + S + R +V AL +L+
Sbjct: 60 ALHCCFQTKD--RLF--FVMEYVNGGDLMFQIQRSRKFDEPRSRF-YAAEVTLALMFLH- 113
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS 885
VI+ DLK N+LL L+DFG+ K VT T T Y+A E
Sbjct: 114 --RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTTTTFCGTPDYIAPEILQ 169
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKP 911
E + D + GV++ E G+ P
Sbjct: 170 ELEYGPSVDWWALGVLMYEMMAGQPP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 3e-04
Identities = 60/234 (25%), Positives = 91/234 (38%), Gaps = 26/234 (11%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI 764
F +L+GRG FG V R G A+KV + + V R+I
Sbjct: 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKK------SVLLAQETVSFFEEERDI 54
Query: 765 IKIISCCSIGDFKALFKA-----LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASA 819
+ I + I + F+ L +EY P G L L N D F +A
Sbjct: 55 LSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLL---NRYEDQFDEDMAQFYLAEL 111
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYM 879
+ ++ + +H D+KP NVL+ L+DFG LT ++ V T Y+
Sbjct: 112 VLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA-NKMVNSKLPVGTPDYI 170
Query: 880 ALEY------GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927
A E +G D ++ GV+ E G+ P F+EG + K + N
Sbjct: 171 APEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP----FHEGTSAKTYNN 220
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 3e-04
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 713 LIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMK----SIRHRNIIKI 767
++G+G FG V+ A ++ A+K + DVEC +++ S+ +
Sbjct: 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDV--VLMDDDVECTMVEKRVLSLAWEHPFLT 59
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
C+ + LF +EY+ G L + S + D+ + ++ L++L+
Sbjct: 60 HLYCTFQTKENLF--FVMEYLNGGDL-MFHIQSCHKFDLPRATFYAAEIICGLQFLH--- 113
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YMALEYG 884
S +++ DLK N+LL + ++DFG+ K + + +T G Y+A E
Sbjct: 114 SKGIVYRDLKLDNILLDTDGHIKIADFGMCK-----ENMLGDAKTCTFCGTPDYIAPEIL 168
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ +T+ D ++FGV+L E G+ P
Sbjct: 169 LGQKYNTSVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 3e-04
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIK---- 766
++G G +G VYK R ++ G A+KV + + +E ++K HRNI
Sbjct: 23 VVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEE-EEIKLEINMLKKYSHHRNIATYYGA 81
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
I G L+ L +E+ GS+ + N + + I L L
Sbjct: 82 FIKKSPPGHDDQLW--LVMEFCGAGSVTDLV--KNTKGNALKEDWIAYICREILRGLAHL 137
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT----KLLTREDQFVTQTQTPATIG--YMA 880
++ VIH D+K NVLL +N L DFG++ + + R + F+ TP + +A
Sbjct: 138 HAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIG---TPYWMAPEVIA 194
Query: 881 LEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ + D+++ G+ +E G P
Sbjct: 195 CDENPDATYDYRSDIWSLGITAIEMAEGAPP 225
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 3e-04
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDV---ECEVMKSIRHRN 763
F ++G+GGFG V +++ G A K ++ + K + E ++++ + R
Sbjct: 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 61
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS-SNYILDIFQRLNIMIDVASALEY 822
++ + D AL L L M G L+ ++Y+ N D + + ++ LE
Sbjct: 62 VVSLAYAYETKD--AL--CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLED 117
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
L+ +++ DLKP N+LL D +SD G+ + E + + T+GYMA E
Sbjct: 118 LH---RERIVYRDLKPENILLDDYGHIRISDLGLA-VEIPEGETIRGRV--GTVGYMAPE 171
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
R + + D + G ++ E GK P
Sbjct: 172 VVKNERYTFSPDWWGLGCLIYEMIEGKSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDV---ECEVMKSIRHRN 763
F ++G+GGFG V +++ G A K ++ + K + E +++ + R
Sbjct: 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRF 61
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS-SNYILDIFQRLNIMIDVASALEY 822
++ + D AL L L M G L+ ++Y+ N D + + ++ LE
Sbjct: 62 VVSLAYAYETKD--AL--CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLED 117
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
L +++ DLKP N+LL D +SD G L + + T T+GYMA E
Sbjct: 118 LQ---RERIVYRDLKPENILLDDRGHIRISDLG---LAVQIPEGETVRGRVGTVGYMAPE 171
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ + + + D + G ++ E G+ P
Sbjct: 172 VINNEKYTFSPDWWGLGCLIYEMIQGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 37/233 (15%)
Query: 713 LIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
LIG GGFG VY+ + + N Q ++ + E VM+++ + NI I
Sbjct: 19 LIGCGGFGCVYETQCASDHCI-----NNQAVAKIENLENETIVMETLVYNNIYDIDKIAL 73
Query: 773 IGDFKALFKALALEYMPHGS------------LEKYLYSSNYILDIFQRL---------N 811
+ + +Y GS LEK + ++ +IF+R+ N
Sbjct: 74 WKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTK---EIFKRIKCKNKKLIKN 130
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
IM D+ + LEY+ + + H D+KP N+++ N ++ D+GI + + ++
Sbjct: 131 IMKDMLTTLEYI---HEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSK 187
Query: 872 TP-----ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG 919
T+ Y L+ + V+ GD+ + G +++ K P + G
Sbjct: 188 EQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG 240
|
Length = 294 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 42/225 (18%)
Query: 714 IGRGGFGSVYKARIQDGME-VAVKVFN-QQCGRAFKSFDV-ECEVMKSIRHRNIIKIISC 770
IG G +G VYKAR + E +A+K +Q S + E ++K ++H NI+++
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY------ 824
+ K L+ L EY+ L+K++ SS F + +I YLY
Sbjct: 70 --VHSEKRLY--LVFEYLDL-DLKKHMDSS----PDFAKNPRLIKT-----YLYQILRGI 115
Query: 825 -FGYSTPVIHCDLKPSNVLLGDNMVA-HLSDFGITKLL---TREDQFVTQTQTPATIGYM 879
+ +S V+H DLKP N+L+ A L+DFG+ + R T T T+ Y
Sbjct: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR-----TFTHEVVTLWYR 170
Query: 880 ALE--YGSEGRVSTNGDVYNFGVMLMET------FTGKKPTNEIF 916
A E GS ST D+++ G + E F G +E+F
Sbjct: 171 APEILLGSR-HYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELF 214
|
Length = 294 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 4e-04
Identities = 37/135 (27%), Positives = 49/135 (36%), Gaps = 55/135 (40%)
Query: 286 GSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL 345
G IPN I L + L NS G IP + G++ +
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITS------------------------ 467
Query: 346 SNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFY 405
LE +DLS NS +GSIPE +G LT+L
Sbjct: 468 -----LEVLDLSYNSF--------------------------NGSIPESLGQLTSLRILN 496
Query: 406 LGGNNLNGSIPITLG 420
L GN+L+G +P LG
Sbjct: 497 LNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 4e-04
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 21/152 (13%)
Query: 713 LIGR----GGFGSVYKARIQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIK 766
LIG+ + K + + + VAVK N K E + ++H NI+
Sbjct: 5 LIGKCFEDLMIVHLAKHKPTNTL-VAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILP 63
Query: 767 IISC-CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL---NIMIDVASALEY 822
++ + + M +GS E L + + L I+ DV +AL+Y
Sbjct: 64 YVTSFIVDSELYVVSP-----LMAYGSCEDLL--KTHFPEGLPELAIAFILKDVLNALDY 116
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854
+ +S IH +K S++LL + LS
Sbjct: 117 I---HSKGFIHRSVKASHILLSGDGKVVLSGL 145
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 4e-04
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Query: 713 LIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVM-KSIRHRNIIKI 767
+IG+G FG V AR + + AVKV ++ + K E V+ K+++H ++ +
Sbjct: 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 61
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
D K F L+Y+ G L +L L+ R ++ASAL YL+
Sbjct: 62 HFSFQTAD-KLYF---VLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH--- 113
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG 887
S +++ DLKP N+LL L+DFG+ K + T + T Y+A E +
Sbjct: 114 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG--TTSTFCGTPEYLAPEVLHKQ 171
Query: 888 RVSTNGDVYNFGVMLMETFTGKKP 911
D + G +L E G P
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 5e-04
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 43/214 (20%)
Query: 714 IGRGGFGSVYKA-RIQDGMEVAVKVF-----NQ-QCGRAFKSFDVECEVMKSIRHRNIIK 766
IG G G V A G+ VAVK NQ RA++ E ++K + H+NII
Sbjct: 29 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNIIS 84
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKY--LYSSNYILD--IFQRLNIMIDVASALEY 822
+++ + P SLE++ +Y ++D + Q +++ +D + Y
Sbjct: 85 LLNV----------------FTPQKSLEEFQDVYLVMELMDANLCQVIHMELD-HERMSY 127
Query: 823 LYFG--------YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
L + +S +IH DLKPSN+++ + + DFG+ + T F+ T
Sbjct: 128 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFM-MTPYVV 184
Query: 875 TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTG 908
T Y A E N D+++ G ++ E G
Sbjct: 185 TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 5e-04
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISC- 770
++G+G FG V A ++ E A+K + + DVEC + + R +
Sbjct: 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDV--VLEDDDVECTM---VERRVLALAWEHP 56
Query: 771 ------CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
C+ + LF +EY+ G L ++ SS D + ++ L++L+
Sbjct: 57 FLTHLFCTFQTKEHLF--FVMEYLNGGDLMFHIQSSGR-FDEARARFYAAEIICGLQFLH 113
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPATIGYMALEY 883
+I+ DLK NVLL + ++DFG+ K + E + T TP Y+A E
Sbjct: 114 ---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTP---DYIAPEI 167
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ + + D ++FGV+L E G+ P
Sbjct: 168 LKGQKYNESVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 7e-04
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 21/229 (9%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAF----KSFDVECEVMKSIRHRNIIKIIS 769
IG G FG V + I VA V + A F + + + ++H NI++ +
Sbjct: 3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG 62
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYIL---DIFQRLNIMIDVASALEYLYFG 826
C +A+ L EY G L+ YL + + + ++A+ + +++
Sbjct: 63 QC----VEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH-- 116
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
+H DL N L ++ + D+GI +ED T+ + ++A E E
Sbjct: 117 -KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGE 175
Query: 887 --GRVSTN-----GDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928
G + T +V+ GV L E F ++ L H + D
Sbjct: 176 FHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKD 224
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 7e-04
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 32/220 (14%)
Query: 713 LIGRGGFGSVYKARIQDGME-VAVKVF-NQQCGRAFKSFDV-ECEVMKSIRHRNIIKIIS 769
++G G +G V K R ++ E VA+K F + + K + E +++++++ NI+++
Sbjct: 8 VVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKE 67
Query: 770 CCSI-GDFKALFKALA------LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
G +F+ + LE MP+G + + S YI + + ++
Sbjct: 68 AFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRS--YIYQLIKAIH----------- 114
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
+ + ++H D+KP N+L+ N V L DFG + L+ E T+ AT Y + E
Sbjct: 115 --WCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLS-EGSNANYTEYVATRWYRSPE 171
Query: 883 YGSEGRVSTNGDVYNFGVMLME------TFTGKKPTNEIF 916
D+++ G +L E F G+ +++F
Sbjct: 172 LLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF 211
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 0.001
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 31/215 (14%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFN--QQCGRAFKS-FDVECEVMKSIRHRNIIKII 768
+IGRG FG V ++++ +V A+K+ N + RA + F E +V+ + ++ I +
Sbjct: 8 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLH 67
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYL--YSSNYILDI----FQRLNIMIDVASALEY 822
+ D L+ L ++Y G L L + D+ + I ID L Y
Sbjct: 68 Y--AFQDENNLY--LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHY 123
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYM--- 879
+H D+KP N+L+ N L+DFG + L ED V + T Y+
Sbjct: 124 ---------VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPE 173
Query: 880 ---ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
A+E G +G+ D ++ GV + E G+ P
Sbjct: 174 ILQAMEDG-KGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 0.001
Identities = 46/202 (22%), Positives = 76/202 (37%), Gaps = 56/202 (27%)
Query: 744 RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI 803
RA + E + + H NI+KI + + ++ A YM + LYS Y
Sbjct: 205 RAAIQLENEILALGRLNHENILKI---------EEILRSEANTYMITQKYDFDLYSFMYD 255
Query: 804 LD--------IFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ Q IM + A+EY++ +IH D+K N+ L + L DFG
Sbjct: 256 EAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFG 312
Query: 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNG-------------DVYNFGVML 902
T P A +YG G V+TN D+++ G++L
Sbjct: 313 --------------TAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL 358
Query: 903 METFT---------GKKPTNEI 915
++ + G KP ++
Sbjct: 359 LDMLSHDFCPIGDGGGKPGKQL 380
|
Length = 501 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 30/120 (25%), Positives = 65/120 (54%), Gaps = 19/120 (15%)
Query: 744 RAFKSFDVECEVMKSIRHRNIIKIISCC----SIGDFKALFKALALEYMPHGSLEKYLYS 799
RA++ +MK + H+NII +++ S+ +F+ ++ L +E M +L + +
Sbjct: 61 RAYREL----VLMKLVNHKNIIGLLNVFTPQKSLEEFQDVY--LVMELMDA-NLCQVI-- 111
Query: 800 SNYILDIFQRLNIMI-DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858
LD +R++ ++ + +++L+ S +IH DLKPSN+++ + + DFG+ +
Sbjct: 112 -QMDLD-HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 166
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.002
Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 15/157 (9%)
Query: 751 VECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI--LDIFQ 808
+E +++++ H ++I++ G + +PH S + Y Y + L I Q
Sbjct: 106 IEAMLLQNVNHPSVIRMKDTLVSGAITCMV-------LPHYSSDLYTYLTKRSRPLPIDQ 158
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
L I + L YL+ + +IH D+K N+ + D + D G + F+
Sbjct: 159 ALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLG 215
Query: 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMET 905
T+ A E + + ++ D+++ G++L E
Sbjct: 216 ---LAGTVETNAPEVLARDKYNSKADIWSAGIVLFEM 249
|
Length = 357 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.003
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVL 842
L +EY+ G ++ L+ Y D + + +VA AL+YL+ +IH DLKP N+L
Sbjct: 81 LVMEYLIGGDVKSLLHIYGY-FDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNML 136
Query: 843 LGDNMVAHLSDFGITKLLTRED 864
+ + L+DFG++K+ +
Sbjct: 137 ISNEGHIKLTDFGLSKVTLNRE 158
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.003
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 713 LIGRGGFGSVYKA-RIQDGMEVAVKVFNQQ------CGRAFKSFDVECEVMKSIRHRNII 765
+G G +GSV A + G +VA+K ++ RA++ E ++K ++H N+I
Sbjct: 22 QVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYR----ELTLLKHMQHENVI 77
Query: 766 KII----SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821
++ S S +F+ + L + YM L+K + + V L
Sbjct: 78 GLLDVFTSAVSGDEFQDFY--LVMPYM-QTDLQKIMGHP------LSEDKVQYLVYQMLC 128
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
L + +S +IH DLKP N+ + ++ + DFG+ + E GY+
Sbjct: 129 GLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE-----------MTGYVVT 177
Query: 882 EYGSEGRVSTNG-------DVYNFGVMLMETFTGK 909
+ V N D+++ G ++ E TGK
Sbjct: 178 RWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.003
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 41/214 (19%)
Query: 714 IGRGGFGSV-YKARIQDGMEVAVKVFNQQ------CGRAFKSFDVECEVMKSIRHRNIIK 766
+G G +G+V + G +VA+K + RA++ E ++K ++H N+I
Sbjct: 23 VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYR----ELRLLKHMKHENVIG 78
Query: 767 IISC----CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
++ S+ F + L + +M L K + D Q L V L+
Sbjct: 79 LLDVFTPDLSLDRFHDFY--LVMPFM-GTDLGKLMKHEKLSEDRIQFL-----VYQMLKG 130
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
L + ++ +IH DLKP N+ + ++ + DFG+ + QT + T GY+
Sbjct: 131 LKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR----------QTDSEMT-GYVVTR 179
Query: 883 YGSEGRVSTNG-------DVYNFGVMLMETFTGK 909
+ V N D+++ G ++ E TGK
Sbjct: 180 WYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVECEVMK------SIRHRNII 765
++G+G FG V A + E+ A+K+ + + DVEC +++ S + +
Sbjct: 7 VLGKGSFGKVMLAERKGTDELYAIKILKKDV--VIQDDDVECTMVEKRVLALSGKPPFLT 64
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
++ SC D L+ +EY+ G L + + F+ + + A L+F
Sbjct: 65 QLHSCFQTMD--RLY--FVMEYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFF 116
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT--QTPATIGYMALEY 883
+S +I+ DLK NV+L ++DFG+ K D T+T TP I + Y
Sbjct: 117 LHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENMWDGVTTKTFCGTPDYIAPEIIAY 175
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFNEGM 920
G+ + D + FGV+L E G+ P +E+F M
Sbjct: 176 QPYGK---SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 214
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 744 RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKY--LYSSN 801
RA++ E +MK + H+NII +++ + P SLE++ +Y
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV----------------FTPQKSLEEFQDVYIVM 108
Query: 802 YILD--IFQRLNIMIDVASALEYLYFG--------YSTPVIHCDLKPSNVLLGDNMVAHL 851
++D + Q + + +D + YL + +S +IH DLKPSN+++ + +
Sbjct: 109 ELMDANLCQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGK 909
DFG+ + T F+ T Y A E N D+++ G ++ E G
Sbjct: 168 LDFGLAR--TAGTSFMMTPYV-VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.004
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFK-SFDVECEVMKSIRHRNIIKIISC-C 771
+GRG +G VYKA+ +DG + Q G S E +++ ++H N+I +
Sbjct: 9 VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFL 68
Query: 772 SIGDFKALFKALALEYMPHG--SLEKYLYSSNYILDIFQRLNIMID--VASALEYLYFGY 827
S D K L +Y H + K+ +S Q M+ + L+ +++ +
Sbjct: 69 SHSDRKVW---LLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH 125
Query: 828 STPVIHCDLKPSNVLL 843
+ V+H DLKP+N+L+
Sbjct: 126 ANWVLHRDLKPANILV 141
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.004
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 713 LIGRGGFGSVYKARIQDGME-VAVKVFNQQCGRAFKSFDVECEVMK----SIRHRNIIKI 767
++G+G FG V A ++ E AVK + DVEC +++ ++ N
Sbjct: 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDV--VLIDDDVECTMVEKRVLALAWENPFLT 59
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
C+ + LF +E++ G L ++ D+++ ++ L++L+
Sbjct: 60 HLYCTFQTKEHLF--FVMEFLNGGDLMFHIQDKGR-FDLYRATFYAAEIVCGLQFLH--- 113
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKL-LTREDQFVTQTQTPATIGYMALEYGSE 886
S +I+ DLK NV+L + ++DFG+ K + +++ T TP Y+A E
Sbjct: 114 SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP---DYIAPEILQG 170
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKP 911
+ + + D ++FGV+L E G+ P
Sbjct: 171 LKYTFSVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1002 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.98 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.98 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.98 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.98 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.98 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.98 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.98 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.98 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.98 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.98 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.98 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.98 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.98 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.98 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.98 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.98 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.97 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.97 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.96 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.95 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.95 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.94 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.94 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.94 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.94 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.93 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.93 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.93 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.91 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.91 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.91 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.9 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.9 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.9 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.88 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.88 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.88 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.86 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.86 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.83 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.83 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.82 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.81 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.81 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.79 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.77 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.77 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.77 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.75 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.75 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.75 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.74 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.74 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.74 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.71 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.69 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.68 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.68 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.67 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.67 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.65 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.64 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.62 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.57 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.56 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.53 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.51 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.49 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.48 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.46 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.4 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.38 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.36 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.27 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.25 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.21 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.19 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.17 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.16 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.15 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.14 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.13 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.11 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.1 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.1 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.1 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.09 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.04 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.02 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.02 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.97 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.96 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.95 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.94 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.94 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.93 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.83 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.83 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.8 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.7 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.68 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.63 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.63 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.62 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.53 | |
| COG5238 | 388 | RNA1 Ran GTPase-activating protein (RanGAP) involv | 98.52 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.52 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.52 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.42 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.38 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.38 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-117 Score=1130.68 Aligned_cols=920 Identities=33% Similarity=0.532 Sum_probs=777.9
Q ss_pred ChhHHHHHHHHHHhccCCCCCccccCCCCCCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccC
Q 037042 8 ITTDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSN 87 (1002)
Q Consensus 8 ~~~~~~~l~~~k~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N 87 (1002)
.+.|++||++||+++. +|...+ .+|+...+||.|+||+|+. .++|+.|||++|+++|.+|+.+..+++|+.|+|++|
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~-~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYL-SNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccC-CCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 4689999999999994 787766 4899888999999999986 468999999999999999999999999999999999
Q ss_pred CCCCCCCcccc-cccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCC
Q 037042 88 QFSGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGI 166 (1002)
Q Consensus 88 ~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 166 (1002)
+++|.+|..+. ++++|++|+|++|.++|.+|.. .+++|++|+|++|.+++.+|..++++++|++|+|++|.+.+.+
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~---~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 180 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG---SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKI 180 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCcc---ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccC
Confidence 99999998876 9999999999999999999874 5899999999999999999999999999999999999999999
Q ss_pred ccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccc
Q 037042 167 PKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNM 246 (1002)
Q Consensus 167 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 246 (1002)
|..|+++++|++|+|++|.+++ .+|..++++++|++|+|++|++++.+|..+.++
T Consensus 181 p~~~~~l~~L~~L~L~~n~l~~-------------------------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 235 (968)
T PLN00113 181 PNSLTNLTSLEFLTLASNQLVG-------------------------QIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGL 235 (968)
T ss_pred ChhhhhCcCCCeeeccCCCCcC-------------------------cCChHHcCcCCccEEECcCCccCCcCChhHhcC
Confidence 9999999999999999999975 578999999999999999999999999999999
Q ss_pred cccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhc
Q 037042 247 STIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLG 326 (1002)
Q Consensus 247 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 326 (1002)
++|+.|++++|++++.++. .+..+++|++|+|++|++++.+|..+.++++|++|+|++|++.+.+|..|.++++|+.|+
T Consensus 236 ~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 314 (968)
T PLN00113 236 TSLNHLDLVYNNLTGPIPS-SLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILH 314 (968)
T ss_pred CCCCEEECcCceeccccCh-hHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEE
Confidence 9999999999999876654 467899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEc
Q 037042 327 LNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYL 406 (1002)
Q Consensus 327 L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 406 (1002)
+++|.++.... ..+..+++|+.|++++|.+.+..+.. +.. ..+|+.|++++|++++.+|..+..+++|+.|++
T Consensus 315 l~~n~~~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~p~~-l~~-~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l 387 (968)
T PLN00113 315 LFSNNFTGKIP-----VALTSLPRLQVLQLWSNKFSGEIPKN-LGK-HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLIL 387 (968)
T ss_pred CCCCccCCcCC-----hhHhcCCCCCEEECcCCCCcCcCChH-HhC-CCCCcEEECCCCeeEeeCChhHhCcCCCCEEEC
Confidence 99999986432 24778999999999999998765532 222 358999999999999999999999999999999
Q ss_pred cCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCccccccccccccc
Q 037042 407 GGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISV 486 (1002)
Q Consensus 407 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 486 (1002)
++|++.+.+|..+..+++|+.|++++|++++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|++.+.
T Consensus 388 ~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~ 467 (968)
T PLN00113 388 FSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGG 467 (968)
T ss_pred cCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccc
Q 037042 487 IPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDL 566 (1002)
Q Consensus 487 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 566 (1002)
+|..+ ..++|+.|++++|++++..|..+.++++|+.|+|++|++++.+|..++++++|+.|+|++|.+++.+|..|..+
T Consensus 468 ~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 546 (968)
T PLN00113 468 LPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEM 546 (968)
T ss_pred cCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCc
Confidence 88766 46899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCCCCCCCCccccccCCCCCCCCCC-CCCCCCCcccccc
Q 037042 567 MSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPN-LHVPPCKTSIQHT 645 (1002)
Q Consensus 567 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~-~~~~pc~~~~~~~ 645 (1002)
++|+.|+|++|++++.+|..+.++++|+.|++++|+++|.+|..+++.++...++.||+.+||.+. ...++|....
T Consensus 547 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~--- 623 (968)
T PLN00113 547 PVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR--- 623 (968)
T ss_pred ccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccc---
Confidence 999999999999999999999999999999999999999999999999999999999999998653 2345675321
Q ss_pred ccccee-EeeeeccchhhHHHHH-HHHHhhhhccCCCCC-CCCCCccc------ccccccCHHHHHHhhcCCCCCceeec
Q 037042 646 RRKNTI-LLGIFLPLSTIFMIAV-ILLIARNRKRGRQQP-NDADMPQE------ATWRRFSYLELCQATDGFSENNLIGR 716 (1002)
Q Consensus 646 ~~~~~~-~~~i~~~~~~~~~i~v-~l~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~lG~ 716 (1002)
....++ ++++++++++++++++ ++++.+++++...+. ........ .....+++.+ ....|...+.||+
T Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ig~ 700 (968)
T PLN00113 624 KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND---ILSSLKEENVISR 700 (968)
T ss_pred ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHH---HHhhCCcccEEcc
Confidence 111222 2222222222222222 222222222111111 00000000 0011223333 3346788899999
Q ss_pred cCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCCCCChhH
Q 037042 717 GGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEK 795 (1002)
Q Consensus 717 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~ 795 (1002)
|+||+||+|+. .++..||||++...... ...|++++++++|||||+++++|...+ ..++||||+++|+|.+
T Consensus 701 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~----~~~lv~Ey~~~g~L~~ 772 (968)
T PLN00113 701 GKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEK----GAYLIHEYIEGKNLSE 772 (968)
T ss_pred CCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCC----CCEEEEeCCCCCcHHH
Confidence 99999999986 57899999998654321 234688999999999999999998776 5689999999999999
Q ss_pred hhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCC
Q 037042 796 YLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875 (1002)
Q Consensus 796 ~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt 875 (1002)
+++. ++|..+.+|+.|||+|++|||+.+.++|+||||||+||+++.++.+++. ||.+...... ....+|
T Consensus 773 ~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------~~~~~t 841 (968)
T PLN00113 773 VLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD------TKCFIS 841 (968)
T ss_pred HHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC------CCcccc
Confidence 9963 7899999999999999999997777899999999999999999988876 6655433211 223678
Q ss_pred cccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh-hhhhcccCccCChhhhHHHhHH
Q 037042 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI-SIMKIVDGSLLSREDIQFVAKE 954 (1002)
Q Consensus 876 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 954 (1002)
..|||||+..+..|+.++|||||||++|||+||+.||+..........+|+...... ....+.|+....... .+.
T Consensus 842 ~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 917 (968)
T PLN00113 842 SAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS----VNQ 917 (968)
T ss_pred ccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC----ccH
Confidence 899999999999999999999999999999999999976655556677776544322 233444443322111 123
Q ss_pred HHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 955 QCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 955 ~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
++..++.+++.+||+.+|++||||+||+++|+++....+...
T Consensus 918 ~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~~~ 959 (968)
T PLN00113 918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSSCV 959 (968)
T ss_pred HHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccccc
Confidence 455678999999999999999999999999999977555443
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-61 Score=617.91 Aligned_cols=519 Identities=35% Similarity=0.516 Sum_probs=481.4
Q ss_pred CCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEE
Q 037042 77 SSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILR 156 (1002)
Q Consensus 77 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 156 (1002)
.+++.|+|++|.++|.+|..|..+++|++|+|++|+++|.+|..++..+++|++|+|++|.++|.+|. +.+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 47899999999999999999999999999999999999999999998999999999999999998886 5789999999
Q ss_pred cccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccc
Q 037042 157 LSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLV 236 (1002)
Q Consensus 157 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~ 236 (1002)
|++|.+++.+|..|+++++|++|+|++|.+.+ .+|..++++++|++|+|++|+++
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-------------------------~~p~~~~~l~~L~~L~L~~n~l~ 201 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG-------------------------KIPNSLTNLTSLEFLTLASNQLV 201 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccCcccc-------------------------cCChhhhhCcCCCeeeccCCCCc
Confidence 99999999999999999999999999999875 57889999999999999999999
Q ss_pred cccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCcccc
Q 037042 237 GVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTF 316 (1002)
Q Consensus 237 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 316 (1002)
+.+|..+.++++|+.|+|++|++.+.++. .+..+++|++|+|++|++++.+|..+.++++|++|+|++|++.+.+|..+
T Consensus 202 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l 280 (968)
T PLN00113 202 GQIPRELGQMKSLKWIYLGYNNLSGEIPY-EIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSI 280 (968)
T ss_pred CcCChHHcCcCCccEEECcCCccCCcCCh-hHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhH
Confidence 99999999999999999999999876654 36789999999999999999999999999999999999999999999999
Q ss_pred ccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccC
Q 037042 317 GNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIG 396 (1002)
Q Consensus 317 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 396 (1002)
.++++|++|+|++|.++.... ..+.++++|+.|++++|.+.+..+.. +.. .++|+.|++++|++++.+|..++
T Consensus 281 ~~l~~L~~L~Ls~n~l~~~~p-----~~~~~l~~L~~L~l~~n~~~~~~~~~-~~~-l~~L~~L~L~~n~l~~~~p~~l~ 353 (968)
T PLN00113 281 FSLQKLISLDLSDNSLSGEIP-----ELVIQLQNLEILHLFSNNFTGKIPVA-LTS-LPRLQVLQLWSNKFSGEIPKNLG 353 (968)
T ss_pred hhccCcCEEECcCCeeccCCC-----hhHcCCCCCcEEECCCCccCCcCChh-Hhc-CCCCCEEECcCCCCcCcCChHHh
Confidence 999999999999999986432 23778999999999999998765432 222 35799999999999999999999
Q ss_pred CCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCccc
Q 037042 397 NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNL 476 (1002)
Q Consensus 397 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 476 (1002)
.+++|+.|++++|++++.+|.++..+++|+.|++++|.+.+.+|..+..+++|+.|+|++|++++.+|..|..+++|+.|
T Consensus 354 ~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 433 (968)
T PLN00113 354 KHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFL 433 (968)
T ss_pred CCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeec
Q 037042 477 SLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ 556 (1002)
Q Consensus 477 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (1002)
++++|++.+.+|..+..+++|+.|++++|++.+.+|..+ ..++|+.|++++|++++.+|..|.++++|+.|+|++|+++
T Consensus 434 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 512 (968)
T PLN00113 434 DISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLS 512 (968)
T ss_pred ECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcce
Confidence 999999999999999999999999999999998888766 4589999999999999999999999999999999999999
Q ss_pred ccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC-CCCCCCccccccCCCCCCCCC
Q 037042 557 GSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG-GSFGNFSAESFEGNKLLCGSP 631 (1002)
Q Consensus 557 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 631 (1002)
+.+|..+..+++|++|+|++|.+++.+|..+..+++|+.|+|++|+++|.+|.. ..+..+....+.+|+..+.-|
T Consensus 513 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 513 GEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred eeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 999999999999999999999999999999999999999999999999999974 345556667778888765433
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-49 Score=436.05 Aligned_cols=291 Identities=38% Similarity=0.622 Sum_probs=248.1
Q ss_pred cccccCHHHHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEE
Q 037042 692 TWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771 (1002)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 771 (1002)
..+.|++.++..+|++|...++||+|+||.||+|...+|+.||||++.........+|..|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56779999999999999999999999999999999999999999988765432145699999999999999999999999
Q ss_pred ecCchhhHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEE
Q 037042 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH 850 (1002)
Q Consensus 772 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 850 (1002)
.+.+. ..++|||||++|+|.++++.... .++|..|++||.++|+||+|||+.+.++||||||||+|||+|+++++|
T Consensus 141 ~e~~~---~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 141 LEGGE---HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred ecCCc---eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 98762 36899999999999999998776 899999999999999999999988888999999999999999999999
Q ss_pred EecccccccccC-CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc-cccccHHHHHHH
Q 037042 851 LSDFGITKLLTR-EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF-NEGMTLKHWVND 928 (1002)
Q Consensus 851 l~DfGla~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~-~~~~~~~~~~~~ 928 (1002)
|+|||+|+.... .....+. ..||.+|+|||+...+..+.|+|||||||+++|++||+.|.+... .....+.+|+..
T Consensus 218 lsDFGLa~~~~~~~~~~~~~--~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTT--VMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred ccCccCcccCCccccceeee--cCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 999999965543 2221111 179999999999999999999999999999999999999987654 334558899866
Q ss_pred HHhh-hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 929 WLLI-SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 929 ~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.... .+.+++|+.+...... ...+...+..++.+|++.+|++||+|.||+++|+.+...
T Consensus 296 ~~~~~~~~eiiD~~l~~~~~~----~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKEGEYP----DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHCcchhheeCCCccCCCCC----hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 5555 6889999987632111 114556799999999999999999999999999776654
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-47 Score=392.03 Aligned_cols=255 Identities=24% Similarity=0.300 Sum_probs=212.8
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.+..+.||+|..|+|||++.+ +++.+|+|++.... ....+++.+|+++++.++||+||++||+|..... ..+++
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~---~isI~ 156 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE---EISIC 156 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc---eEEee
Confidence 3455678999999999999865 78999999995443 4457889999999999999999999999987662 36799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||||++|+|++++...+ .+++...-+|+.+|++||.|||+ .++||||||||+|||++..|+|||||||.++.+...
T Consensus 157 mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred hhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 99999999999998764 48999999999999999999994 489999999999999999999999999999987654
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
.....+||..|||||.+.+..|+.++||||||++++||++|+.||...........+. +..|++.....
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L--------l~~Iv~~ppP~ 301 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL--------LCAIVDEPPPR 301 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH--------HHHHhcCCCCC
Confidence 2245789999999999999999999999999999999999999998753333322222 23344322211
Q ss_pred hhhhHHHhHH-HHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKE-QCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~-~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.|. .++.++.+++..|+++||.+||++.|+++|-.
T Consensus 302 -------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpf 337 (364)
T KOG0581|consen 302 -------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPF 337 (364)
T ss_pred -------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHH
Confidence 112 36788999999999999999999999999855
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=404.38 Aligned_cols=260 Identities=28% Similarity=0.438 Sum_probs=213.7
Q ss_pred CCceeeccCcceEEEEEeCCCcEEEEEEeecccch--hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 710 ENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR--AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
..+.+|+|+||+||+|.|.....||||++...... ..+.|.+|+.+|++++|||||+++|+|..... ..++||||
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~---~~~iVtEy 121 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG---SLCIVTEY 121 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC---ceEEEEEe
Confidence 34559999999999999985555999999865322 25689999999999999999999999987642 35799999
Q ss_pred CCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCC-cEEccCCCCCeeeCCCC-cEEEecccccccccCCC
Q 037042 788 MPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTP-VIHCDLKPSNVLLGDNM-VAHLSDFGITKLLTRED 864 (1002)
Q Consensus 788 ~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~~ 864 (1002)
+++|+|.++++.. +..+++..++.+|.|||+||+||| +.+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999999883 567999999999999999999999 777 99999999999999997 99999999998765432
Q ss_pred ceeeeccCCCCcccccccccC--CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 865 QFVTQTQTPATIGYMALEYGS--EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
..++...||+.|||||++. ...|+.|+|||||||++|||+||+.||........ .. .++...
T Consensus 199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~--~~-----------~v~~~~- 262 (362)
T KOG0192|consen 199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV--AS-----------AVVVGG- 262 (362)
T ss_pred --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH--HH-----------HHHhcC-
Confidence 2334578999999999999 56899999999999999999999999988644111 11 111110
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
.+...+..++..+..+|.+||..||.+||++.+++..|+.+........
T Consensus 263 -----~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~ 311 (362)
T KOG0192|consen 263 -----LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAG 311 (362)
T ss_pred -----CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccC
Confidence 0111223367889999999999999999999999999999987665433
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-49 Score=407.57 Aligned_cols=489 Identities=28% Similarity=0.402 Sum_probs=401.9
Q ss_pred EEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCC
Q 037042 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLS 134 (1002)
Q Consensus 55 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls 134 (1002)
.+.|+|++|.+. .+-+.+.+|..|.+|++++|+++ .+|.+++.+.+++.|+.++|+++ ++|..+. .+++|..|+.+
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~-s~~~l~~l~~s 122 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIG-SLISLVKLDCS 122 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHh-hhhhhhhhhcc
Confidence 678999999998 67788999999999999999999 89999999999999999999998 8999984 68999999999
Q ss_pred CCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCC
Q 037042 135 KNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214 (1002)
Q Consensus 135 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 214 (1002)
+|.+. .+|++++.+-.|..|+..+|+++ ..|+.++++.+|..|++.+|++. .
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~--------------------------~ 174 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK--------------------------A 174 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh--------------------------h
Confidence 99999 78889999999999999999998 88889999999999999999998 4
Q ss_pred CCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccccccccccc-
Q 037042 215 IPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF- 293 (1002)
Q Consensus 215 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 293 (1002)
+|...-+++.|+.||+..|-++ .+|..++.+.+|..|+|.+|++. .+| .|.+...|++|+++.|+|. .+|....
T Consensus 175 l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP--ef~gcs~L~Elh~g~N~i~-~lpae~~~ 249 (565)
T KOG0472|consen 175 LPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP--EFPGCSLLKELHVGENQIE-MLPAEHLK 249 (565)
T ss_pred CCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC--CCCccHHHHHHHhcccHHH-hhHHHHhc
Confidence 5655555999999999999887 67889999999999999999997 455 3557789999999999998 5555554
Q ss_pred ccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccc
Q 037042 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373 (1002)
Q Consensus 294 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 373 (1002)
++++|.+|||.+|+++ ..|+.+.-+.+|++||+++|.|+++|.. ++++ +|++|-+.+|.+..+.....-..-
T Consensus 250 ~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~s------Lgnl-hL~~L~leGNPlrTiRr~ii~~gT 321 (565)
T KOG0472|consen 250 HLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYS------LGNL-HLKFLALEGNPLRTIRREIISKGT 321 (565)
T ss_pred ccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcc------cccc-eeeehhhcCCchHHHHHHHHcccH
Confidence 8999999999999998 6789999999999999999999999865 7888 999999999998765322111111
Q ss_pred cccccEEec--CCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCcc---
Q 037042 374 SHSLKIFDM--SDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAK--- 448 (1002)
Q Consensus 374 ~~~L~~L~L--~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--- 448 (1002)
..-|++|.= -.-.++..-...-... + ... ........+.+.++|++++-+++ .+|+.++.-.+
T Consensus 322 ~~vLKyLrs~~~~dglS~se~~~e~~~------t----~~~-~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~ 389 (565)
T KOG0472|consen 322 QEVLKYLRSKIKDDGLSQSEGGTETAM------T----LPS-ESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEI 389 (565)
T ss_pred HHHHHHHHHhhccCCCCCCcccccccC------C----CCC-Ccccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcc
Confidence 111222210 0111110000000000 0 001 11122345667889999999998 67777666555
Q ss_pred ccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCC
Q 037042 449 VYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSM 528 (1002)
Q Consensus 449 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 528 (1002)
+...+++.|++. .+|..+..++.+.+.-+..|+..+.+|..++.+++|+.|+|++|-+. .+|.+++.+..|+.||+|.
T Consensus 390 Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~ 467 (565)
T KOG0472|consen 390 VTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSF 467 (565)
T ss_pred eEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccc
Confidence 889999999998 68888888887766555555556778999999999999999999998 5899999999999999999
Q ss_pred CccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCc
Q 037042 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604 (1002)
Q Consensus 529 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1002)
|+|. .+|..+..+..|+.+-.++|++....|+.+.+|.+|.+|||.+|.|. .+|+.++++++|++|+|++|+|.
T Consensus 468 NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 468 NRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 9998 77998888888999888999999877887999999999999999998 89999999999999999999998
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=387.44 Aligned_cols=255 Identities=25% Similarity=0.377 Sum_probs=209.8
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccc-------hhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCG-------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
.+.|.+.+.||+|+||.|-+|. .++|+.||||++++... .....+++|+++|++++|||||++++++...+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d- 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD- 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC-
Confidence 3567888999999999999996 56899999999975421 12334679999999999999999999999888
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC---CcEEEec
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN---MVAHLSD 853 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl~D 853 (1002)
..||||||++||+|.+++-+.+. +.+.....+++|++.|+.||| ++||+||||||+|||+..+ ..+||+|
T Consensus 250 ---s~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 250 ---SSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ---ceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecc
Confidence 66899999999999999988765 788888999999999999999 9999999999999999755 7899999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCC---cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR---VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
||+|+...... .+...+||+.|.|||++.... +..++|+||+||++|-+++|.+||.+...+.. +.
T Consensus 323 FGlAK~~g~~s---fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-l~------- 391 (475)
T KOG0615|consen 323 FGLAKVSGEGS---FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-LK------- 391 (475)
T ss_pred cchhhccccce---ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-HH-------
Confidence 99999876433 446679999999999987765 34478999999999999999999987544321 11
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+|..++.... ...+....++..++|.+||..||++|||+.|+++|-|
T Consensus 392 ----eQI~~G~y~f~----p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 392 ----EQILKGRYAFG----PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred ----HHHhcCccccc----ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 12333332221 1234567788999999999999999999999998754
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-45 Score=381.70 Aligned_cols=201 Identities=29% Similarity=0.496 Sum_probs=181.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
..+|...+.||+|+||+||+|+.+ ++.+||||.+.+. .....+.+..|+.+++.++|||||++++++...+ +.
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~----~i 84 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD----FI 84 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC----eE
Confidence 457888899999999999999854 6899999999876 4556677889999999999999999999999888 78
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC------CcEEEeccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN------MVAHLSDFG 855 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~------~~~kl~DfG 855 (1002)
++|||||+||+|.+|+++.+ .+++..++.++.|+|.|+++|| +++||||||||+|||++.. -.+||+|||
T Consensus 85 ~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 85 YLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred EEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 99999999999999999876 4999999999999999999999 9999999999999999754 568999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF 916 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~ 916 (1002)
+|+.+.+..- ....+|++.|||||++..++|+.|+|+||+|+++|+|++|+.||....
T Consensus 161 fAR~L~~~~~---a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 161 FARFLQPGSM---AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhhhCCchhH---HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 9998875442 245689999999999999999999999999999999999999998643
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-45 Score=398.81 Aligned_cols=251 Identities=23% Similarity=0.324 Sum_probs=214.4
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.+|...+.||+|||+.||+++. ..|+.||+|++.+. .....+.+.+||++.++++|||||+++++|++.+ ++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~----nV 93 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN----NV 93 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC----ce
Confidence 4699999999999999999986 78999999999864 3456788999999999999999999999999888 88
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|+|.|+|+.++|.+++++. +.+++.+++.++.||+.|+.||| +.+|+|||||-.|++++++.+|||+|||+|+.+.
T Consensus 94 YivLELC~~~sL~el~Krr-k~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 94 YIVLELCHRGSLMELLKRR-KPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred EEEEEecCCccHHHHHHhc-CCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeec
Confidence 9999999999999999854 46999999999999999999999 9999999999999999999999999999999987
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.++. .....+||+-|+|||++....+++.+||||+|||+|-|+.|++||+... ..+. ..+|....
T Consensus 170 ~~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-----vket--------y~~Ik~~~ 234 (592)
T KOG0575|consen 170 YDGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-----VKET--------YNKIKLNE 234 (592)
T ss_pred Cccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-----HHHH--------HHHHHhcC
Confidence 5432 1235689999999999999999999999999999999999999997631 1111 11222221
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.. .|........+||.++|+.+|.+|||+++|+.|=.-
T Consensus 235 Y~--------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 235 YS--------MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred cc--------cccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 11 222455678899999999999999999999988553
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-45 Score=395.85 Aligned_cols=257 Identities=28% Similarity=0.468 Sum_probs=217.5
Q ss_pred CCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
+...+.||+|.||+||.|+++....||+|.++.. ....+.|.+|+.+|++++|++||+++++|..++ ..+|||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~----piyIVtE~ 282 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE----PIYIVTEY 282 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCC----ceEEEEEe
Confidence 3445789999999999999998889999998764 234577889999999999999999999998876 56899999
Q ss_pred CCCCChhHhhhc-cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 788 MPHGSLEKYLYS-SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 788 ~~~g~L~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+.|+|.+|++. .+..+...+.+.++.|||+||+||+ ++++|||||.++|||++++..+||+|||+|+...++.+
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y- 358 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY- 358 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCce-
Confidence 999999999997 4557899999999999999999999 99999999999999999999999999999995554433
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
.......-+..|.|||.+..+.++.|+|||||||+||||+| |+.||......+ .+. .+-
T Consensus 359 ~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-----v~~--------~le------- 418 (468)
T KOG0197|consen 359 TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-----VLE--------LLE------- 418 (468)
T ss_pred eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-----HHH--------HHh-------
Confidence 33344556788999999999999999999999999999999 888887653321 111 111
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
.+.+...|+.|++.++++|..||+.+|++|||++.+...++++.....
T Consensus 419 ~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~~ 466 (468)
T KOG0197|consen 419 RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTSTE 466 (468)
T ss_pred ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhccc
Confidence 122334567799999999999999999999999999999998876543
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-44 Score=353.82 Aligned_cols=257 Identities=23% Similarity=0.318 Sum_probs=207.1
Q ss_pred cCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeE-EecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISC-CSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~-~~~~~~~~~~~ 781 (1002)
.+|++.++||+|.||+|||++ ..+|..||.|.+.-. +....+....|+.++++++|||||++++. +.+.. ...
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~---evl 95 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN---EVL 95 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc---hhh
Confidence 458888999999999999997 668999999988633 34456788899999999999999999983 33222 146
Q ss_pred HHhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeCCCCcEEEecccc
Q 037042 782 ALALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
++|||||++|+|...++.. +..+++..+++++.|++.||.++|... ++ |+||||||.||+++.+|.||++|||+
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL 174 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGL 174 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchh
Confidence 8999999999999988653 347999999999999999999999432 44 99999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
++.+..... .....+||+.||+||.+.+.+|++|+||||+||++|||+.-++||.+. .+.+.. .+
T Consensus 175 ~r~l~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~--------~K 239 (375)
T KOG0591|consen 175 GRFLSSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLC--------KK 239 (375)
T ss_pred HhHhcchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHH--------HH
Confidence 998876443 235678999999999999999999999999999999999999999763 222211 12
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
|..+.... ...+..+..+..||..|+.+||+.||+...+++.+..
T Consensus 240 I~qgd~~~------~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 240 IEQGDYPP------LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHcCCCCC------CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 22222111 1224567889999999999999999986665555543
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-44 Score=406.24 Aligned_cols=258 Identities=33% Similarity=0.554 Sum_probs=223.4
Q ss_pred CCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
+.+..+.||+|+||.||+|+.. +...||||.++..... ..++|++|++++..++|||||+++|+|.+++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~---- 562 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD---- 562 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC----
Confidence 4455678999999999999743 3567999999877655 7899999999999999999999999999988
Q ss_pred HHHHhhccCCCCChhHhhhccC-------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN-------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN 846 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~-------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~ 846 (1002)
-.++|+|||+.|||.+|+.... .+++..+.+.||.|||.||+||. ++.+|||||.++|+||+++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccc
Confidence 6789999999999999997532 13788899999999999999999 8999999999999999999
Q ss_pred CcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHH
Q 037042 847 MVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHW 925 (1002)
Q Consensus 847 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~ 925 (1002)
..|||+|||+++..-..+++.......-+.+|||||.+.+++|+.++|||||||+|||+++ |+.||.+...++.
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV----- 714 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV----- 714 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH-----
Confidence 9999999999999888887766556667889999999999999999999999999999999 9999988655432
Q ss_pred HHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 926 VNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 926 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
+..+.++.+ ...|+.|+.++++||..||+..|.+||+++||-..|+.....
T Consensus 715 --------Ie~i~~g~l-------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 715 --------IECIRAGQL-------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred --------HHHHHcCCc-------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 223333333 224678999999999999999999999999999999987654
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-47 Score=394.38 Aligned_cols=473 Identities=28% Similarity=0.374 Sum_probs=377.6
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
-++.|++++|+++ ++|++++.+..++.|+.++|+++ .+|..++++.+|+.|+.++|.+. ++|++++ .+-.|+.|+.
T Consensus 69 ~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~-~~~~l~dl~~ 144 (565)
T KOG0472|consen 69 CLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIG-RLLDLEDLDA 144 (565)
T ss_pred ceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHH-HHhhhhhhhc
Confidence 4789999999998 89999999999999999999999 99999999999999999999998 8898885 5888999999
Q ss_pred CCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccC
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKC 213 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~ 213 (1002)
.+|+++ ..|+.++++.+|..|++.+|.+....|..+ +++.|++||+.+|.++
T Consensus 145 ~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-------------------------- 196 (565)
T KOG0472|consen 145 TNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE-------------------------- 196 (565)
T ss_pred cccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh--------------------------
Confidence 999999 889999999999999999999995555545 5999999999999997
Q ss_pred CCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccccccccccc
Q 037042 214 EIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293 (1002)
Q Consensus 214 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 293 (1002)
.+|.+++.|.+|+.|+|.+|+|. .+| +|.+++.|.+|+++.|+++ .++.--...++.|..|||..|+++ ..|+.++
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 68999999999999999999998 456 8999999999999999997 555545568999999999999998 7899999
Q ss_pred ccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccc-cccccc
Q 037042 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILS-RKSVGN 372 (1002)
Q Consensus 294 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~~ 372 (1002)
-+.+|.+||+++|.|++ .|.++++| .|+.|.+.+|.++++..++-..++-.-+++|+.- +..-.++.-.. ....+.
T Consensus 273 lLrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~-~~~dglS~se~~~e~~~t 349 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSK-IKDDGLSQSEGGTETAMT 349 (565)
T ss_pred HhhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHh-hccCCCCCCcccccccCC
Confidence 99999999999999995 57889999 9999999999999998876444444445555540 00001110000 000000
Q ss_pred ccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCC---CCEEEccCCcccccCCccccCCccc
Q 037042 373 LSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQK---LQVLYFPDNKLEGSIPDEVCRLAKV 449 (1002)
Q Consensus 373 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~l~~L 449 (1002)
... ..-.....+.+.+.|++++-+++ .+|.....-.+ ....+++.|++. .+|..+..++.+
T Consensus 350 -------------~~~-~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkel 413 (565)
T KOG0472|consen 350 -------------LPS-ESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKEL 413 (565)
T ss_pred -------------CCC-Ccccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHH
Confidence 000 11122334556777777777777 45554333333 677888888887 677766666654
Q ss_pred cE-EEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCC
Q 037042 450 YQ-LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSM 528 (1002)
Q Consensus 450 ~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 528 (1002)
.+ +++++|.++ .+|..++.+++|..|+|++|-+.. +|..++.+..|+.||+|.|++. .+|..+..+..++.+-.++
T Consensus 414 vT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln~-LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~ 490 (565)
T KOG0472|consen 414 VTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLND-LPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASN 490 (565)
T ss_pred HHHHHhhcCccc-cchHHHHhhhcceeeecccchhhh-cchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcc
Confidence 43 555666555 778888888888888888887765 5778888888888888888888 5788777777788888888
Q ss_pred CccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCccc
Q 037042 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVS 586 (1002)
Q Consensus 529 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 586 (1002)
|++..+.|..+.+|.+|..|||.+|.|. .+|..++++++|++|+|++|++. ..+..
T Consensus 491 nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~ 546 (565)
T KOG0472|consen 491 NQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRHQ 546 (565)
T ss_pred ccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHHH
Confidence 8988887877889999999999999998 78888999999999999999987 44433
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-43 Score=348.88 Aligned_cols=267 Identities=20% Similarity=0.254 Sum_probs=206.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+.|+...++|+|+||+|||.+.+ +|+.||||+|.... ....+-..+||+++++++|||+|.++++|.... ..+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr----klh 77 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR----KLH 77 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc----eeE
Confidence 45788889999999999999855 69999999997543 334566789999999999999999999997655 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|+|||+. ++.+-+++.....+...+.++.+|++.|+.|+| ++++|||||||+|||++.+|.+||||||+|+.+..
T Consensus 78 LVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 78 LVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred EEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 99999988 555556665556899999999999999999999 99999999999999999999999999999998874
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh--hhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL--ISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ 939 (1002)
+.. .++.-+.|.+|.|||.+.+ .+|+..+||||+||++.||++|.+-|.+...-++ +..+...... .+-.+++.
T Consensus 154 pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ-Ly~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 154 PGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ-LYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred Ccc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH-HHHHHHHHcccCHHHHHHhc
Confidence 322 2355678999999998877 6799999999999999999999999876433222 2222211100 01111211
Q ss_pred ----------CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 940 ----------GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 940 ----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+.....+..+.. -+.....+.+++++|+..||++|++.+|++.|
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k-~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERK-YPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred cCCceeeeecCCCCCccchhhh-cccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 111111111111 12345578999999999999999999999876
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=360.31 Aligned_cols=242 Identities=26% Similarity=0.355 Sum_probs=201.5
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.++||+|+||.||.++. ++++.+|+|++++.. ....+...+|..++.+++||+||+++-.|++.+ .
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~----k 99 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE----K 99 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC----e
Confidence 46799999999999999999975 468999999998652 234677889999999999999999999998877 7
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.|+|+||+.||.|...+++.+. +++..++.++..|+.||.||| +++|||||+||+|||+|.+|.++|+|||+|+..
T Consensus 100 LylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 8999999999999999987764 888889999999999999999 999999999999999999999999999999865
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
...+. .....+||+.|||||++.+.+|+.++|.||+||++|||++|.+||.... ...+.. ++...
T Consensus 176 ~~~~~--~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-----~~~~~~--------~I~~~ 240 (357)
T KOG0598|consen 176 LKDGD--ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-----VKKMYD--------KILKG 240 (357)
T ss_pred ccCCC--ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-----HHHHHH--------HHhcC
Confidence 43322 2245799999999999999999999999999999999999999997742 222222 22222
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI 976 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp 976 (1002)
..... +.-......+++.+.+..+|++|.
T Consensus 241 k~~~~-------p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 241 KLPLP-------PGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred cCCCC-------CccCCHHHHHHHHHHhccCHHHhc
Confidence 21111 111345678999999999999996
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-43 Score=375.52 Aligned_cols=201 Identities=27% Similarity=0.306 Sum_probs=84.5
Q ss_pred CCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccc
Q 037042 398 LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLS 477 (1002)
Q Consensus 398 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 477 (1002)
+++|+.|.|..|.+.......|..+.++++|+|..|+++..-.+++.+++.|+.|+||+|.|..+.++.+.-.++|++|+
T Consensus 244 L~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~Ld 323 (873)
T KOG4194|consen 244 LPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELD 323 (873)
T ss_pred chhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEe
Confidence 33333333333333333333344444444444444444433333444444444444444444444444444444444444
Q ss_pred cccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCc---ccccCCccccEEEccCee
Q 037042 478 LASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP---NAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 478 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~ 554 (1002)
|++|+|+...+..|..+..|+.|+|++|.+...-...|..+++|++|||++|.|+..+. ..|.+|++|+.|+|.+|+
T Consensus 324 Ls~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNq 403 (873)
T KOG4194|consen 324 LSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQ 403 (873)
T ss_pred ccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCce
Confidence 44444444444444444444444444444443333334444444444444444433322 123444444444444444
Q ss_pred ecccCCcccccccccceeccccccccCCCcccccCCCccceeeCC
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLS 599 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 599 (1002)
|..+...+|.++..|+.|||.+|.|-.+-|.+|..+ .|+.|-+.
T Consensus 404 lk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 404 LKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred eeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 443333444444444444444444444444444444 44444433
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=373.30 Aligned_cols=250 Identities=25% Similarity=0.367 Sum_probs=213.9
Q ss_pred cCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
..|..-.+||+|+-|.||.|+ ..+++.||||++........+.+..|+.+|+..+|+|||.+++.|...+ ..|+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d----eLWVV 348 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD----ELWVV 348 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccc----eeEEE
Confidence 457777899999999999996 5678999999998877777788999999999999999999999887776 67899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||||+||+|.|.+.... +++.++..|+.++++||+||| .++|+|||||.+|||++.+|.+||+|||+|..+....
T Consensus 349 MEym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred EeecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 99999999999997654 899999999999999999999 9999999999999999999999999999998876554
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. .....+||++|||||+.....|++|+||||||++++||+.|.+||-...+ ++. +..|.+...
T Consensus 424 ~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P----lrA---------lyLIa~ng~-- 486 (550)
T KOG0578|consen 424 S--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRA---------LYLIATNGT-- 486 (550)
T ss_pred C--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh----HHH---------HHHHhhcCC--
Confidence 3 33567899999999999999999999999999999999999999865211 111 222222211
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.....++..+..+.+++.+||+.||++|+++.|+++|
T Consensus 487 ---P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 487 ---PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred ---CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1122345567889999999999999999999999998
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-42 Score=371.51 Aligned_cols=259 Identities=25% Similarity=0.405 Sum_probs=209.7
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+.......||+|+||+||+|+|.. .||||++... .....+.|+.|+.++++-+|.||+-+.|||.... + +|
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~----~-AI 464 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP----L-AI 464 (678)
T ss_pred HHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc----e-ee
Confidence 345667889999999999999873 6999998754 2446789999999999999999999999998776 4 89
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+.+|+|-+|+.+++..+..++..+.+.||+|||+||.||| .++|||||+|..||++.++++|||+|||++..-..-
T Consensus 465 iTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW 541 (678)
T ss_pred eehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeee
Confidence 99999999999999988878999999999999999999999 999999999999999999999999999998643221
Q ss_pred CceeeeccCCCCcccccccccCCC---CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG---RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..........|...|||||+++.+ +|++++||||||+|+|||+||..||...-.+.. +..+..+
T Consensus 542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI-------------ifmVGrG 608 (678)
T KOG0193|consen 542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI-------------IFMVGRG 608 (678)
T ss_pred ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe-------------EEEeccc
Confidence 111112344577789999987653 589999999999999999999999984221111 2223222
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.+. +... .....|+.++.+|+..||.+++++||.+.+++..|+++..
T Consensus 609 ~l~-pd~s--~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 609 YLM-PDLS--KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccC-ccch--hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 211 1111 1234678899999999999999999999999998887765
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=363.78 Aligned_cols=264 Identities=27% Similarity=0.394 Sum_probs=209.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
..+|...+.||+|+||+||++... +|+.+|||.+........+.+++|+.++++++|||||+++|.....+. ...++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~--~~~~i 93 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN--DEYNI 93 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC--eeeEe
Confidence 345788899999999999999865 499999999876543336778999999999999999999997443331 24579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~ 862 (1002)
.|||+++|+|.+++.+.+..+++..++.++.||++||+||| +++||||||||+|||++. ++.+||+|||+++....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 99999999999999987756999999999999999999999 999999999999999999 79999999999987764
Q ss_pred -CCceeeeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 863 -EDQFVTQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 863 -~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
...........||+.|||||++..+. ..+++||||+||++.||+||++||...... ..+ +..+...
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~----~~~--------~~~ig~~ 238 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE----AEA--------LLLIGRE 238 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch----HHH--------HHHHhcc
Confidence 11112234578999999999988643 345999999999999999999999763110 011 1111111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
... ...+...+....+++.+|+.++|++||||.++++|.......
T Consensus 239 ~~~------P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 239 DSL------PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred CCC------CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 100 012334567889999999999999999999999997765543
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=365.10 Aligned_cols=269 Identities=21% Similarity=0.267 Sum_probs=210.8
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchh-HHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRA-FKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|...++||.|.||.||+|+ ..+|+.||||.+++.-... ...-.+|+..++++. ||||+++.+++.+.+. ..
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~---~L 85 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR---IL 85 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc---eE
Confidence 4678889999999999999997 5579999999987653322 233467999999998 9999999999987764 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++|||||+. +|.++++..++.+++..++.|+.||.+||+|+| ++|+.|||+||+|||+.....+||+|||+|+...
T Consensus 86 ~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccc
Confidence 799999977 999999998889999999999999999999999 9999999999999999999999999999999887
Q ss_pred CCCceeeeccCCCCccccccccc-CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH--------HHHh-
Q 037042 862 REDQFVTQTQTPATIGYMALEYG-SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN--------DWLL- 931 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~--------~~~~- 931 (1002)
....+ +.-+.|.+|+|||++ +.+.|+.++||||+|||++|+.+-++-|.+..+-++ +..... .|..
T Consensus 162 SkpPY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq-i~KIc~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 162 SKPPY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ-IYKICEVLGTPDKDSWPEG 237 (538)
T ss_pred cCCCc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH-HHHHHHHhCCCccccchhH
Confidence 65433 566789999999975 556789999999999999999999999877533221 111111 0000
Q ss_pred hhhhhcccCccCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 932 ISIMKIVDGSLLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 932 ~~~~~i~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..+.....=.... ........+. +..+..++|.+|+.+||.+||||.|+++|-
T Consensus 238 ~~La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 0111111111100 1112222333 678899999999999999999999999883
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=362.87 Aligned_cols=288 Identities=24% Similarity=0.274 Sum_probs=219.7
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.+.|+..++||+|.||.||+|+ ..+|+.||+|+++.+. +.......+||.+|++++||||+++.+...+... ...
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~--~si 193 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS--GSI 193 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC--ceE
Confidence 3458888999999999999998 5679999999987554 4455677889999999999999999998876521 256
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|||+|||++ +|..++...+-.++..++..++.|++.||+|+| .++|+|||||.+|||||.+|.+||+|||+|+.+.
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeecc
Confidence 899999988 999999887667999999999999999999999 9999999999999999999999999999999877
Q ss_pred CCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH--------HHhh
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND--------WLLI 932 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~--------~~~~ 932 (1002)
..... .++..+.|.+|.|||.+.+. .|+.++|+||.|||+.||++|++.|.+..+-+ ++..+++. |...
T Consensus 270 ~~~~~-~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve-Ql~kIfklcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 270 PSGSA-PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE-QLHKIFKLCGSPTEDYWPVS 347 (560)
T ss_pred CCCCc-ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH-HHHHHHHHhCCCChhccccc
Confidence 65432 35778899999999987775 59999999999999999999999987743321 22222211 1100
Q ss_pred h--hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH---HhhcccCCCCCCCCCC
Q 037042 933 S--IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL---LKINDLDFNGYPSYAF 1001 (1002)
Q Consensus 933 ~--~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L---~~i~~~~~~~~~~y~~ 1001 (1002)
+ ....+.+........+.. -...+....+|+..+|..||++|.||.+++++= .+-...++...|.|.-
T Consensus 348 kLP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp~y~~ 420 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSLPKYPP 420 (560)
T ss_pred cCCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccCCCCCc
Confidence 1 111111111111111111 123356678999999999999999999999762 2333445555555543
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=366.18 Aligned_cols=254 Identities=24% Similarity=0.366 Sum_probs=211.5
Q ss_pred HhhcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecc---cchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 703 QATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
....+|..++.||+|+|++||+|+ .+++++||||++.+. .+...+.+.+|-++|.++ .||.|+++|..|.++.
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~-- 147 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE-- 147 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc--
Confidence 345679999999999999999997 457999999998764 233456678899999999 8999999999998877
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..|+|+||+++|+|.+++++.+ .+++...+.+|.+|+.|++||| ++|||||||||+|||+|+||++||+|||.|
T Consensus 148 --sLYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 148 --SLYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred --ceEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeecccc
Confidence 6789999999999999998876 4999999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCce---------eee--ccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH
Q 037042 858 KLLTREDQF---------VTQ--TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 858 ~~~~~~~~~---------~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~ 926 (1002)
+.+.+.... ... ..++||-.|.+||++.....++.+|+|+||||+|+|+.|.+||.+. .+...
T Consensus 222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~-Neyli----- 295 (604)
T KOG0592|consen 222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA-NEYLI----- 295 (604)
T ss_pred ccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc-cHHHH-----
Confidence 987653221 111 4578999999999999999999999999999999999999999763 11111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
+.+|++-....+ +.-++.+.+|+.+.+..||.+|+|++++-+|.
T Consensus 296 -------FqkI~~l~y~fp--------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 296 -------FQKIQALDYEFP--------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred -------HHHHHHhcccCC--------CCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 122322222222 22346688999999999999999999999884
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=373.27 Aligned_cols=391 Identities=23% Similarity=0.247 Sum_probs=306.4
Q ss_pred CEEeCCCCcccccCCccccCC--CCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcc
Q 037042 129 ESLNLSKNMFHGGIPSALSNC--TYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQF 206 (1002)
Q Consensus 129 ~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~ 206 (1002)
..||++++.+...--..+.+. ..-+.||+|+|+++...+..|.++++|++++|..|.|+
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt------------------- 115 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT------------------- 115 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-------------------
Confidence 468888888863211122221 13456999999999888888999999999999999998
Q ss_pred cCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccc
Q 037042 207 SHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG 286 (1002)
Q Consensus 207 ~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 286 (1002)
.||...+...+|+.|+|.+|.|+.+-.+.+..++.|+.||||.|.|+ .++...|-.-.++++|+|++|.|+.
T Consensus 116 -------~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~ 187 (873)
T KOG4194|consen 116 -------RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITT 187 (873)
T ss_pred -------hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccc
Confidence 67877777788999999999998777777776666666666666665 3444444444556666666666655
Q ss_pred cccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccc
Q 037042 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILS 366 (1002)
Q Consensus 287 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 366 (1002)
.--..|.++.+|.+|.|++|+|+.+.+..|.+|++|+.|+|..|+|+.+.. .+|.++++
T Consensus 188 l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~-----ltFqgL~S---------------- 246 (873)
T KOG4194|consen 188 LETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG-----LTFQGLPS---------------- 246 (873)
T ss_pred cccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh-----hhhcCchh----------------
Confidence 555555555555556666666655555555555555555555555554321 12444444
Q ss_pred ccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCC
Q 037042 367 RKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRL 446 (1002)
Q Consensus 367 ~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 446 (1002)
|+.|.|..|.|+..-...|..+.++++|+|..|+++..-..++.++++|+.|+||.|.|..+.++.+.-.
T Consensus 247 ----------l~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsft 316 (873)
T KOG4194|consen 247 ----------LQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFT 316 (873)
T ss_pred ----------hhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhc
Confidence 4455555555555556788999999999999999998889999999999999999999999889988888
Q ss_pred ccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcc---ccccccccee
Q 037042 447 AKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL---EIGNLKVLVK 523 (1002)
Q Consensus 447 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~ 523 (1002)
++|+.|+|++|+|+...++.|..+..|+.|+|++|++..+...+|.++.+|+.|||++|.|...+.+ .|.+|++|+.
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lrk 396 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRK 396 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhh
Confidence 9999999999999999999999999999999999999999889999999999999999999865543 5888999999
Q ss_pred eeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceecccccc
Q 037042 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNN 578 (1002)
Q Consensus 524 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 578 (1002)
|+|.+|+|..+...+|.++.+|+.|||.+|.|..+.|++|..+ .|+.|-++.-.
T Consensus 397 L~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSss 450 (873)
T KOG4194|consen 397 LRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSS 450 (873)
T ss_pred eeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccc
Confidence 9999999998888999999999999999999999999999999 89998876433
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=330.68 Aligned_cols=269 Identities=22% Similarity=0.294 Sum_probs=209.5
Q ss_pred cCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|...+++|+|.||.||+|+ ..+|+.||||.++... +.......+||..++.++|+||+.++++|...+ ...
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~----~l~ 77 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS----NLS 77 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC----ceE
Confidence 468888999999999999998 4579999999987542 233456788999999999999999999998766 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|+|||+. +|+..++.....+...++..++.++.+|++|+| .+.|+||||||.|+|++.+|.+||+|||+|+.+..
T Consensus 78 lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 78 LVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred EEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 99999977 999999988889999999999999999999999 99999999999999999999999999999999876
Q ss_pred CCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh------hh
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS------IM 935 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------~~ 935 (1002)
..... +..+.|.+|.|||.+.+. .|+..+||||.|||+.||+-|.+-|.+..+ -.++...++...-.. +.
T Consensus 154 p~~~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD-idQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 154 PNRIQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD-IDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred CCccc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch-HHHHHHHHHHcCCCCcccCcccc
Confidence 65432 334789999999987664 599999999999999999998877765322 222333322211110 11
Q ss_pred hcccCc---cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIVDGS---LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+-|-. ........... ..+.....+++.+|+.++|.+|+|++|+++|=.
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf-~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y 283 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLF-PAASSDALDLLSKMLTYNPKKRITASQALKHPY 283 (318)
T ss_pred ccccHHHHhcCCCCcccccc-ccccHHHHHHHHhhhccCchhcccHHHHhcchh
Confidence 111100 00000011111 234566799999999999999999999998743
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=350.28 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=209.7
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.+.|+....||.|.-++||+|+ ...++.||||+++-+ +....+.+.+|+..|+.++||||++++.+|..+. ..|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~----~LW 100 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS----ELW 100 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc----eeE
Confidence 4579999999999999999998 557899999999754 3334688999999999999999999999998887 789
Q ss_pred HhhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
+||.||.+|++.+.+... ...+++..+..|.+++++||.||| .+|.||||||+.||||+.+|.|||+|||.+..+.
T Consensus 101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 999999999999999764 235899999999999999999999 9999999999999999999999999999887664
Q ss_pred CCC-ceeee-ccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 862 RED-QFVTQ-TQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 862 ~~~-~~~~~-~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
... +.... ...+||+.|||||++.. ..|+.|+||||||++..||.+|..||....+-.+.+....++..... .
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~-t-- 254 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL-T-- 254 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc-c--
Confidence 433 22222 55689999999998443 46999999999999999999999999875444332222111110000 0
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..............+.+++..|+.+||++|||++++++|
T Consensus 255 --------~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 255 --------SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred --------ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 000001112234579999999999999999999999987
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=352.37 Aligned_cols=249 Identities=27% Similarity=0.367 Sum_probs=210.0
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
..|+..++||+|+||.||+|.. ..++.||+|+++-+ .+...+++++|+.++.+++++||.++|+.+..+. ..++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~----~Lwi 88 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT----KLWI 88 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc----cHHH
Confidence 4577889999999999999974 46899999999854 3455688999999999999999999999998887 7899
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+||||.||++.+.++... .+++..+.-|+.++..|+.|+| ..+.+|||||+.||++..+|.||++|||.+..+...
T Consensus 89 iMey~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 89 IMEYCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHHHhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeech
Confidence 999999999999998765 3577888889999999999999 999999999999999999999999999999877654
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
... ...++||+.|||||++....|+.|+||||+|++.+||++|.+|+...++... +..|-.....
T Consensus 165 ~~r--r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv-------------lflIpk~~PP 229 (467)
T KOG0201|consen 165 VKR--RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV-------------LFLIPKSAPP 229 (467)
T ss_pred hhc--cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE-------------EEeccCCCCC
Confidence 432 2567899999999999988999999999999999999999999988665322 1111111111
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.. .......+.++|..|+..+|+.||+|.++++|
T Consensus 230 ~L-------~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 230 RL-------DGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cc-------ccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 10 11355679999999999999999999999987
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=361.97 Aligned_cols=244 Identities=24% Similarity=0.395 Sum_probs=207.5
Q ss_pred CCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 710 ENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
..+-||.|+.|.||+|+++ ++.||||.++.- -+.+|.-+++++||||+.+.|+|.... .+|||||||.
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsP----cyCIiMEfCa 195 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSP----CYCIIMEFCA 195 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCc----eeEEeeeccc
Confidence 4577999999999999987 689999987532 245788999999999999999998766 7799999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeee
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 869 (1002)
.|-|.+.++..+. +.......+..+||.||.||| .+.|||||||.-||||+.+..|||+|||-++...+.. +.
T Consensus 196 ~GqL~~VLka~~~-itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S---Tk 268 (904)
T KOG4721|consen 196 QGQLYEVLKAGRP-ITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS---TK 268 (904)
T ss_pred cccHHHHHhccCc-cCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhh---hh
Confidence 9999999987764 777777899999999999999 8999999999999999999999999999998776542 33
Q ss_pred ccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhH
Q 037042 870 TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949 (1002)
Q Consensus 870 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 949 (1002)
-.++||..|||||+++..+.++|+||||||||||||+||..||.+...... ++.+ ......
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-------------IwGV------GsNsL~ 329 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-------------IWGV------GSNSLH 329 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-------------EEec------cCCccc
Confidence 457899999999999999999999999999999999999999987432211 1111 122334
Q ss_pred HHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
...+..|++-|.-|++.||+..|..||++.+++.||+-....
T Consensus 330 LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 330 LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 456778999999999999999999999999999999865543
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=331.99 Aligned_cols=237 Identities=25% Similarity=0.305 Sum_probs=202.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||.|+||+|..++.+ +|..+|+|++++.. -++.+....|..+++.+.||+++++++.+.+.+ .
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~----~ 118 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS----N 118 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC----e
Confidence 356889999999999999999854 68999999998753 234566778999999999999999999998877 7
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.+|||||++||.|..++++.+. +++..++.+|.||+.|++||| +.+|++||+||+|||+|.+|.+||+|||+|+..
T Consensus 119 lymvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred EEEEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 8899999999999999988765 899999999999999999999 999999999999999999999999999999987
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
... ....+||+.|+|||++...+|..++|.|||||++|||+.|.+||.+...... ..+|..+
T Consensus 195 ~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i-------------Y~KI~~~ 256 (355)
T KOG0616|consen 195 SGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI-------------YEKILEG 256 (355)
T ss_pred cCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH-------------HHHHHhC
Confidence 653 2356899999999999999999999999999999999999999987433110 2344444
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCC
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKR 975 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 975 (1002)
....+. .....+.+++.+.+++|-.+|
T Consensus 257 ~v~fP~--------~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 KVKFPS--------YFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cccCCc--------ccCHHHHHHHHHHHhhhhHhh
Confidence 443332 234568899999999999998
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=351.60 Aligned_cols=270 Identities=25% Similarity=0.299 Sum_probs=214.7
Q ss_pred HHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc---------h-----hHHHHHHHHHHHHhccCCCc
Q 037042 700 ELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---------R-----AFKSFDVECEVMKSIRHRNI 764 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~-----~~~~~~~E~~~l~~l~h~ni 764 (1002)
+-.+..++|++.+.||+|.||.|-+|+.. +++.||||++.+... . -.+.+.+||.+|++++||||
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 33445678999999999999999999854 799999999975311 0 13578999999999999999
Q ss_pred ceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC
Q 037042 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844 (1002)
Q Consensus 765 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~ 844 (1002)
|+++++..+.... ..|||+|||..|.+.+.=.... .+...++++++.++..||+||| .++||||||||+|+|++
T Consensus 171 V~LiEvLDDP~s~--~~YlVley~s~G~v~w~p~d~~-els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 171 VKLIEVLDDPESD--KLYLVLEYCSKGEVKWCPPDKP-ELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLS 244 (576)
T ss_pred eEEEEeecCcccC--ceEEEEEeccCCccccCCCCcc-cccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEc
Confidence 9999998765533 6689999999988865432222 3889999999999999999999 99999999999999999
Q ss_pred CCCcEEEecccccccccCCC---ceeeeccCCCCcccccccccCCCC----cCcccchHHHHHHHHHHHhCCCCCccccc
Q 037042 845 DNMVAHLSDFGITKLLTRED---QFVTQTQTPATIGYMALEYGSEGR----VSTNGDVYNFGVMLMETFTGKKPTNEIFN 917 (1002)
Q Consensus 845 ~~~~~kl~DfGla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~P~~~~~~ 917 (1002)
++|+|||+|||.+....... ....-...+||+.|||||...++. .+.+.||||+||++|.|+.|+.||.+.+.
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~ 324 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE 324 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence 99999999999998663221 111123478999999999866632 37889999999999999999999976432
Q ss_pred ccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 918 EGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
- +-..+|+...+..+.. +++...+.++|.++|.+||++|.+..+|..|.+--++.+.+
T Consensus 325 ~-------------~l~~KIvn~pL~fP~~------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~ 382 (576)
T KOG0585|consen 325 L-------------ELFDKIVNDPLEFPEN------PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSP 382 (576)
T ss_pred H-------------HHHHHHhcCcccCCCc------ccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCC
Confidence 1 1134555554444332 24567899999999999999999999999999987776655
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=337.01 Aligned_cols=274 Identities=20% Similarity=0.210 Sum_probs=213.0
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
+..+.|+..++|++|.||.||+|+.+ +++.||+|+++.+. ....-...+||.++.+++|||||.+-.+....+..
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d-- 150 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD-- 150 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc--
Confidence 34567899999999999999999854 78999999997543 33345678899999999999999999988776644
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..|+|||||+. +|...++..+.++...++..++.|+++|++||| ...|+|||+||+|+|++..|.+||+|||+|+.
T Consensus 151 ~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 151 KIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred eeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhh
Confidence 35799999988 999999988888999999999999999999999 89999999999999999999999999999999
Q ss_pred ccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~ 936 (1002)
++.+-. .++..+.|.+|.|||.+.+. .|+.++|+||+|||+.||+++++-|.+..+.+ ++...+...... +++.
T Consensus 227 ygsp~k--~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d-Ql~~If~llGtPte~iwp 303 (419)
T KOG0663|consen 227 YGSPLK--PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID-QLDKIFKLLGTPSEAIWP 303 (419)
T ss_pred hcCCcc--cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH-HHHHHHHHhCCCccccCC
Confidence 886643 45677889999999988775 49999999999999999999999987754322 222232221111 1111
Q ss_pred c------ccCccCChh---hhHHHhHHH-HHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 937 I------VDGSLLSRE---DIQFVAKEQ-CMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 937 i------~~~~~~~~~---~~~~~~~~~-~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
- +........ ..+...+.. ....-++++..++..||.+|.||.|.++|=
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred CccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 0 000000000 011111111 336678999999999999999999999873
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=356.66 Aligned_cols=247 Identities=25% Similarity=0.400 Sum_probs=209.1
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|-+.+.||+|+||+||||+. .+.+.||+|.+.+.. +...+.+.+|++++++++|||||.++++|+... +.+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~----~~~ 77 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSA----HLW 77 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc----eEE
Confidence 4577778899999999999975 478999999997653 345677899999999999999999999998777 789
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|+||+.| +|..++...+. ++++++..|+.+++.||.||| +.+|.|||+||+|||++..|.+|+||||+|+.+..
T Consensus 78 vVte~a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 78 VVTEYAVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred EEehhhhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 99999977 99999987765 999999999999999999999 99999999999999999999999999999998876
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ..+...||+.|||||...++.|+..+|+||+||++|||++|++||.... +.+.++ .|.....
T Consensus 153 ~t~--vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-----i~~Lv~--------~I~~d~v 217 (808)
T KOG0597|consen 153 NTS--VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-----ITQLVK--------SILKDPV 217 (808)
T ss_pred Cce--eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-----HHHHHH--------HHhcCCC
Confidence 432 3456789999999999999999999999999999999999999997631 111111 1211111
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.. +......+..++...+.+||..|.|..+++.|
T Consensus 218 ~~--------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 KP--------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred CC--------cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 11 22456779999999999999999999999987
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=363.60 Aligned_cols=253 Identities=24% Similarity=0.335 Sum_probs=209.1
Q ss_pred hhcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecc----cc-hhHHHHHHHHHHHHhcc-CCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQ----CG-RAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 776 (1002)
....|...+.||+|+||.|+.|+ ..+|+.||+|++.+. .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~- 93 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT- 93 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC-
Confidence 35679999999999999999997 457899999987653 11 33567778999999998 999999999998877
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEeccc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFG 855 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfG 855 (1002)
..++||||+.||+|.+++.. ..++.+..+..+++|+++|++|+| +++|+||||||+|||++.+ +++||+|||
T Consensus 94 ---~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 94 ---KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred ---eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 57899999999999999998 556888999999999999999999 9999999999999999999 999999999
Q ss_pred cccccc-CCCceeeeccCCCCcccccccccCCCC-cC-cccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 856 ITKLLT-REDQFVTQTQTPATIGYMALEYGSEGR-VS-TNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 856 la~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
++.... ..+ .....+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++......
T Consensus 167 ~s~~~~~~~~---~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l------------ 231 (370)
T KOG0583|consen 167 LSAISPGEDG---LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL------------ 231 (370)
T ss_pred cccccCCCCC---cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH------------
Confidence 999874 322 235678999999999999877 84 889999999999999999999987321111
Q ss_pred hhhhcccCccCChhhhHHHhHHHH-HHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQC-MSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
..++..+....+. .. ...+.+++.+|+..+|.+|+|+.|++.|=+-.
T Consensus 232 -~~ki~~~~~~~p~--------~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~ 279 (370)
T KOG0583|consen 232 -YRKIRKGEFKIPS--------YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQ 279 (370)
T ss_pred -HHHHhcCCccCCC--------CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence 1122222222221 22 56788999999999999999999999776643
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=356.67 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=206.5
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..++|+.++.||+|+||+||.|+. ++|..+|+|++++.. ....+.++.|.++|...++|.||++|-.|.+.+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~---- 214 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE---- 214 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC----
Confidence 457899999999999999999985 479999999998763 345678899999999999999999999999888
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
+.||||||++||++..++...+ .+++..++.++.+.+-|++.+| +.|+|||||||+|+|||..|++||+|||++.-
T Consensus 215 ~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 215 YLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred eeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccch
Confidence 8899999999999999998776 4999999999999999999999 99999999999999999999999999999853
Q ss_pred ccCC----------------------Cce----ee-------------------eccCCCCcccccccccCCCCcCcccc
Q 037042 860 LTRE----------------------DQF----VT-------------------QTQTPATIGYMALEYGSEGRVSTNGD 894 (1002)
Q Consensus 860 ~~~~----------------------~~~----~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~D 894 (1002)
+... +.. .. ....+|||.|||||++.+..|+..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 2210 000 00 01245999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCCcccccccc--cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCC
Q 037042 895 VYNFGVMLMETFTGKKPTNEIFNEGM--TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESP 972 (1002)
Q Consensus 895 vwSlGv~l~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P 972 (1002)
.||+|||+|||+.|.+||....+... .+..|... +..+ ....+..+..|+|.+|+. ||
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~-------------l~fP------~~~~~s~eA~DLI~rll~-d~ 430 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET-------------LKFP------EEVDLSDEAKDLITRLLC-DP 430 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh-------------ccCC------CcCcccHHHHHHHHHHhc-CH
Confidence 99999999999999999987543311 12222111 1111 112344678899999999 99
Q ss_pred CCCCC---HHHHHHHH
Q 037042 973 EKRIN---AKEIVTRL 985 (1002)
Q Consensus 973 ~~Rpt---~~evl~~L 985 (1002)
++|.. ++||-+|-
T Consensus 431 ~~RLG~~G~~EIK~HP 446 (550)
T KOG0605|consen 431 ENRLGSKGAEEIKKHP 446 (550)
T ss_pred HHhcCcccHHHHhcCC
Confidence 99985 77777663
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-40 Score=337.88 Aligned_cols=273 Identities=23% Similarity=0.300 Sum_probs=209.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh-hHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK-ALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~~l 783 (1002)
-.|...+++|+|+||.||+|... +++.||||.+-++.. .-.+|.++|+.++|||||++.-+|...... ..+..+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 35777899999999999999854 579999998865432 224699999999999999999888765544 567889
Q ss_pred hhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEeccccccc
Q 037042 784 ALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFGITKL 859 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~ 859 (1002)
|||||+. +|.++++.. +..++...++-+++||.+|++||| +.+|+||||||+|+|+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999988 999988742 345788888999999999999999 8999999999999999965 9999999999999
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh---hhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI---SIM 935 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~ 935 (1002)
+..++....+ ..|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+. ....++.++++-.... ++.
T Consensus 176 L~~~epniSY---icSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 176 LVKGEPNISY---ICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred eccCCCceeE---EEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHHHhCCCCHHHHh
Confidence 8877654433 35678999997666 46999999999999999999999999873 2334455555433322 222
Q ss_pred hcccC-------ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhccc
Q 037042 936 KIVDG-------SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKINDL 991 (1002)
Q Consensus 936 ~i~~~-------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~~ 991 (1002)
.+.-. ..... .........++.+..+++.+++.++|.+|.++.|+++| ..++++.
T Consensus 252 ~mn~~y~~~~~p~ik~~-~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAH-PWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hcCcccccccCcccccc-cceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 21111 11000 00001223456778999999999999999999999977 4555544
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=387.90 Aligned_cols=259 Identities=27% Similarity=0.476 Sum_probs=216.4
Q ss_pred cCCCCCceeeccCcceEEEEEeCC--Cc----EEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD--GM----EVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
+..+..+.||+|+||.||+|+..+ |. .||||.+++.. .+...+|.+|..+|+.++|||||+++|+|....
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~--- 768 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG--- 768 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC---
Confidence 344566789999999999998543 43 39999987653 456788999999999999999999999998865
Q ss_pred HHHHHhhccCCCCChhHhhhcc------CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEe
Q 037042 779 LFKALALEYMPHGSLEKYLYSS------NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLS 852 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 852 (1002)
..++++|||++|+|..|++.. ...+.....+.++.|||+|+.||+ ++++|||||.++|+|++....|||+
T Consensus 769 -~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 769 -PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred -CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEc
Confidence 567999999999999999987 557889999999999999999999 9999999999999999999999999
Q ss_pred cccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHh
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
|||+|+.+...+++.......-+..|||||.+..+.++.|+|||||||++||++| |..||....+.+. +.
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-----~~---- 915 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-----LL---- 915 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-----HH----
Confidence 9999997776666554433345678999999999999999999999999999999 9999877433211 11
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.+..+. +...|..|+..++++|..||+.+|++||++..+++.+..+-..
T Consensus 916 ----~~~~gg-------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 916 ----DVLEGG-------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred ----HHHhCC-------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 011111 2334667999999999999999999999999999998887643
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=365.63 Aligned_cols=261 Identities=24% Similarity=0.431 Sum_probs=204.5
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
.++|++.++||+|+||.||+|.. .+++.||||++.... ......+..|+++++++ +||||+++++++...+.
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 45789999999999999999963 235789999987543 23356788999999999 89999999998865431
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-------------------------------------------------------
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN------------------------------------------------------- 801 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~------------------------------------------------------- 801 (1002)
..++||||+++|+|.+++...+
T Consensus 86 ---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 86 ---PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred ---ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 4578999999999999987532
Q ss_pred ------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCC
Q 037042 802 ------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875 (1002)
Q Consensus 802 ------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt 875 (1002)
..+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++...............++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 23677888999999999999999 899999999999999999999999999999866433222222334567
Q ss_pred cccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHH
Q 037042 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKE 954 (1002)
Q Consensus 876 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 954 (1002)
..|+|||++.+..++.++|||||||++|||++ |..||....... .+.. .+.++.... .+.
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~~--------~~~~~~~~~-------~~~ 300 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EFCQ--------RLKDGTRMR-------APE 300 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHHH--------HHhcCCCCC-------CCC
Confidence 78999999988889999999999999999997 999987632211 1111 111111100 112
Q ss_pred HHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 955 QCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 955 ~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.++..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 301 ~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 301 NATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 345678999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=359.82 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=213.1
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.-|..++.||+|+-|.|..|+. .+|+.+|||++.+.. ......+++||-+|+-+.||||+++|++|.... +.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~----~l 87 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ----HL 87 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc----eE
Confidence 4478889999999999999984 579999999997652 334577899999999999999999999998877 78
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|+|.||+++|.|.+++-+++. +.+.++.+++.||..|+.|+| ..+|+|||+||+|+|+|..+++||+|||+|..-.
T Consensus 88 ylvlEyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~ 163 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEV 163 (786)
T ss_pred EEEEEecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeeccc
Confidence 899999999999999988765 888888899999999999999 8999999999999999999999999999998655
Q ss_pred CCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
++.-. ...||.+.|.|||++.+.+| +.++||||.|||+|-|+||+.||++ .+++.... ++..+
T Consensus 164 ~gklL---eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLl--------KV~~G 227 (786)
T KOG0588|consen 164 PGKLL---ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLL--------KVQRG 227 (786)
T ss_pred CCccc---cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHH--------HHHcC
Confidence 44332 34679999999999999998 7899999999999999999999985 23333222 22222
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.. ..|..++.+..+|+.+|+.+||++|.|++||++|-+-..
T Consensus 228 ~f--------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 228 VF--------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred cc--------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 21 234556788999999999999999999999999976444
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=369.74 Aligned_cols=254 Identities=24% Similarity=0.459 Sum_probs=215.7
Q ss_pred CCCCceeeccCcceEEEEEeC-C---CcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-D---GMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..+.++||.|.||+||+|+++ . ...||||.++.. .+++..+|..|+.||.+++||||+++.|+..... -.+
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~----PvM 706 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK----PVM 706 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc----eeE
Confidence 356789999999999999865 2 356999999865 3556788999999999999999999999997766 678
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||+|||++|+|+.|++...+.+++.+..-+.++||.||+||. +.++|||||.++|||++.+-.+|++|||+++.+.+
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeeccc
Confidence 999999999999999998888999999999999999999999 89999999999999999999999999999997754
Q ss_pred CC-ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 863 ED-QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 863 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
+. ...+..+-.-+.+|.|||.+...+++.++|||||||||||.++ |.+||-++.+.+. +..|.+
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV-------------IkaIe~- 849 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-------------IKAIEQ- 849 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH-------------HHHHHh-
Confidence 43 2222222234678999999999999999999999999999877 9999877654322 222322
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
+.+...|.+|+..+.+||..||++|-.+||++.+++.+|.++
T Consensus 850 ------gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 850 ------GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred ------ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 233445678999999999999999999999999999999875
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=347.10 Aligned_cols=263 Identities=24% Similarity=0.412 Sum_probs=220.8
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+...+.++||+|-||+|.......+..||||.++..... ...+|..||++|.+++|||||+++|+|...+ ..++|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De----PicmI 613 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD----PLCMI 613 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC----chHHH
Confidence 345667899999999999999988899999999876543 4589999999999999999999999999888 67999
Q ss_pred hccCCCCChhHhhhccCCcC-CHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNYIL-DIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l-~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+|||++|+|..|+.++..+. +.....+|+.|||+||+||. +.++||||+.++|+|+|.++++||+|||+++.+-..
T Consensus 614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccC
Confidence 99999999999999886533 55667789999999999999 899999999999999999999999999999988877
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh--CCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT--GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
+++......+-+.+|||||.+..++++.++|||+|||++||+++ ...||.+...+.. .+ ....+.+..
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v--ve--------n~~~~~~~~ 760 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV--VE--------NAGEFFRDQ 760 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH--HH--------hhhhhcCCC
Confidence 87777667778899999999999999999999999999999876 7788877544321 11 122222211
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
-. ..-...|..|+..++++|.+||+.+-++||+++++..+|++.
T Consensus 761 ~~---~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 761 GR---QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred Cc---ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11 111224567889999999999999999999999999999864
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=333.08 Aligned_cols=286 Identities=24% Similarity=0.237 Sum_probs=212.1
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeec--ccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch-hhH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQ--QCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF-KAL 779 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 779 (1002)
....|...+.||+|+||.|+.|.. .+|+.||||.+.. ......+...+|+.+++.++|+||+.+++.+..... .-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 345566678999999999999975 4799999999873 334556788999999999999999999998876221 122
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..|+|+|+| +.+|...++..+. ++...+..+++|+++|++|+| +.+|+|||+||+|++++.+..+||+|||+|+.
T Consensus 100 DvYiV~elM-etDL~~iik~~~~-L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQD-LTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCcc-ccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccceee
Confidence 468999999 4599999977654 899999999999999999999 99999999999999999999999999999998
Q ss_pred ccCCCceeeeccCCCCccccccccc-CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH---HHHhhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYG-SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN---DWLLISIM 935 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~---~~~~~~~~ 935 (1002)
.........++.-+.|.+|.|||++ ....|+.+.||||.|||+.||++|++-|.+...-. ++..... ....+.+.
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~-Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH-QLQLILELLGTPSEEDLQ 253 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH-HHHHHHHhcCCCCHHHHH
Confidence 8654333445777889999999975 45679999999999999999999999987642210 0111100 00000011
Q ss_pred hcc--------c--CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCCC
Q 037042 936 KIV--------D--GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGYP 997 (1002)
Q Consensus 936 ~i~--------~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~~ 997 (1002)
.+. . +....... .... +.+.....+++.+|+..||.+|+|++|+++|----.=.++..+|
T Consensus 254 ~i~s~~ar~yi~slp~~p~~~f-~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 254 KIRSEKARPYIKSLPQIPKQPF-SSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HhccHHHHHHHHhCCCCCCCCH-HHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 111 0 00111111 1111 24556788999999999999999999999984433333333333
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=339.07 Aligned_cols=283 Identities=26% Similarity=0.298 Sum_probs=218.4
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHh--ccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKS--IRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
...+..+.+|+|+||.||||++. ++.||||++... ..+.+..|-++++. ++|+||++++++-..++......++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34455678999999999999987 589999999854 34667777777765 5899999999987766655556789
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC------CCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG------YSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
|+||.+.|+|.+|+... .++|....+|+..+++||+|||+. ++++|+|||||++|||+..|++..|+|||+|
T Consensus 286 Vt~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred EeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 99999999999999876 489999999999999999999964 4788999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCC------cCcccchHHHHHHHHHHHhCCCCCc-ccccccc-cHHHHH-HH
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGR------VSTNGDVYNFGVMLMETFTGKKPTN-EIFNEGM-TLKHWV-ND 928 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlGv~l~elltg~~P~~-~~~~~~~-~~~~~~-~~ 928 (1002)
.++..+.......+.+||.+|||||++.+.- .-.+.||||+|.|+|||++...-+. +..++.+ .+..=+ ..
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 9988766555566789999999999876532 2245899999999999999665443 2222211 111111 11
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
+..+++.+.+-....++.....+.....+..+.+.+..||..||+.|.|+.=|-+++.++.-.+..
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 111223333333334444445555566778899999999999999999999999999988876654
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=361.32 Aligned_cols=260 Identities=27% Similarity=0.427 Sum_probs=209.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC--CC--cE-EEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ--DG--ME-VAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~--~~--~~-vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
++-...++||+|+||.||+|++. ++ .. ||||..+.. ......++.+|+++|++++|||||++||++....
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~-- 234 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE-- 234 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--
Confidence 34445589999999999999854 23 23 899998752 2556788999999999999999999999998776
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..++|||+|+||+|.++++..+..++..++..++.+.|.||+||| +++++||||.++|+|++.++.+||+|||++
T Consensus 235 --Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 235 --PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred --ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccc
Confidence 568999999999999999998877999999999999999999999 999999999999999999999999999998
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
+.-. ..........-+..|+|||.+..+.|++++|||||||++||+++ |..||.+.... .... +
T Consensus 310 ~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~-----------k 374 (474)
T KOG0194|consen 310 RAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKA-----------K 374 (474)
T ss_pred cCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHH-----------H
Confidence 7543 11111112346778999999999999999999999999999999 88898764322 1111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
+.... .+...+...+..+..++.+||..+|++||+|.++.+.++.+.....
T Consensus 375 I~~~~------~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 375 IVKNG------YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred HHhcC------ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 10100 0111222456778899999999999999999999999999886544
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=318.02 Aligned_cols=251 Identities=25% Similarity=0.329 Sum_probs=209.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|-||.||.|+. +++..||+|++.+.. .....++.+|+++-+.++||||.++|++|.+.. .
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~----r 96 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK----R 96 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc----e
Confidence 46799999999999999999985 468899999987642 334678999999999999999999999998877 6
Q ss_pred HHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.|+++||.++|++...++..+. .+++.....+..|+|.|+.|+| .++|+||||||+|+|++.++..||+|||-+.-
T Consensus 97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 7899999999999999985433 5888888999999999999999 99999999999999999999999999998864
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
.... .....+||..|.|||+..+..++..+|+|++||..||++.|.+||..... +..+. +|..
T Consensus 174 ~p~~----kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-~etYk------------rI~k 236 (281)
T KOG0580|consen 174 APSN----KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-SETYK------------RIRK 236 (281)
T ss_pred cCCC----CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-HHHHH------------HHHH
Confidence 3322 22456899999999999999999999999999999999999999987542 12121 1211
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
-... .|...+....++|.+|+..+|.+|.+..|++.|-+-
T Consensus 237 ~~~~--------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 237 VDLK--------FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred cccc--------CCcccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 1111 123345678899999999999999999999999763
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=338.74 Aligned_cols=274 Identities=24% Similarity=0.346 Sum_probs=220.7
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc--cCCCcceeeeEEecCchhhHH
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI--RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~ 780 (1002)
+...+.+..+.||+|.||+||+|+|. |+.||||+|...+ ...+.+|.++++.+ +|+||..+++.-..+...-.+
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hhhheeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 34456778899999999999999998 8999999998543 35677888888875 999999999876655544456
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-----CCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG-----YSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
.++|++|.+.|+|.||+.+ ..++....++++..+|.||+|||.. .++.|+|||||+.|||+.+++...|+|+|
T Consensus 284 LwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred EEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence 7899999999999999987 4589999999999999999999953 36789999999999999999999999999
Q ss_pred ccccccCCCceee--eccCCCCcccccccccCCCC------cCcccchHHHHHHHHHHHh----------CCCCCccccc
Q 037042 856 ITKLLTREDQFVT--QTQTPATIGYMALEYGSEGR------VSTNGDVYNFGVMLMETFT----------GKKPTNEIFN 917 (1002)
Q Consensus 856 la~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlGv~l~ellt----------g~~P~~~~~~ 917 (1002)
+|-.......... ....+||.+|||||++...- .-..+||||||.|+||+.. -+.||.+..+
T Consensus 362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP 441 (513)
T ss_pred eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence 9987765432222 24568999999999875531 2345999999999999886 3457766544
Q ss_pred ccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 918 EGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.+-.. +++.+++--+..++.....+...++...+.++|+.||..+|..|.|+-.+-+.|.++.+.
T Consensus 442 ~DPs~---------eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 442 SDPSF---------EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred CCCCH---------HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 43322 235566665555555556677778899999999999999999999999999999988753
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=346.15 Aligned_cols=250 Identities=24% Similarity=0.290 Sum_probs=200.2
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccch---hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR---AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
...||+|++|.||+|.+ +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+........++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999988 5899999998754322 2567889999999999999999999987621112256799999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
+++|+|.+++...+ .+++.....++.+++.|++||| + .+++||||||+||++++++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 104 CTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 99999999997754 5889999999999999999999 5 478899999999999999999999999998654322
Q ss_pred eeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 867 VTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... .++... +.......
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-----~~~~~~--------i~~~~~~~ 241 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-----KEIYDL--------IINKNNSL 241 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-----HHHHHH--------HHhcCCCC
Confidence 23467889999999876 6799999999999999999999999976321 111111 10000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
..+..++..+.+++.+||+.||++|||++|+++.|+.++
T Consensus 242 ------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 242 ------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 011235677999999999999999999999999999875
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=351.34 Aligned_cols=262 Identities=24% Similarity=0.423 Sum_probs=202.8
Q ss_pred cCCCCCceeeccCcceEEEEEeCC-----------------CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCccee
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD-----------------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKI 767 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~ 767 (1002)
.+|+..++||+|+||.||+|++.+ +..||+|++.... ......+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 468888999999999999997532 3469999987643 3345678899999999999999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHhhhccC------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN------------------YILDIFQRLNIMIDVASALEYLYFGYST 829 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~ 829 (1002)
++++...+ ..++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.
T Consensus 85 ~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~ 157 (304)
T cd05096 85 LGVCVDED----PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SL 157 (304)
T ss_pred EEEEecCC----ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HC
Confidence 99998766 5689999999999999886432 13677888999999999999999 89
Q ss_pred CcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh--
Q 037042 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-- 907 (1002)
Q Consensus 830 ~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-- 907 (1002)
+|+||||||+||+++.++.+||+|||+++...............++..|+|||+...+.++.++|||||||++|||++
T Consensus 158 ~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 158 NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 999999999999999999999999999987655443323334456788999999888889999999999999999987
Q ss_pred CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 908 GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 908 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
+..||...... .....+..........+. ...+..++..+.+++.+||..+|++|||+.||.+.|++
T Consensus 238 ~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 238 KEQPYGELTDE--QVIENAGEFFRDQGRQVY-----------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCCcCCHH--HHHHHHHHHhhhcccccc-----------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 55677653221 111111111111000000 00112345678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=357.94 Aligned_cols=256 Identities=25% Similarity=0.414 Sum_probs=202.4
Q ss_pred cCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
++|+..+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+++++.+ +||||+++++++..++
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~-- 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG-- 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC--
Confidence 4688899999999999999963 246689999987543 33456788999999999 8999999999998777
Q ss_pred hHHHHHhhccCCCCChhHhhhccC--------------------------------------------------------
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN-------------------------------------------------------- 801 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------------------------- 801 (1002)
..++||||+++|+|.++++...
T Consensus 113 --~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 113 --PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred --cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 6789999999999999886432
Q ss_pred ------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 802 ------------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 802 ------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
..+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 13678888999999999999999 899999999999999999999999999999876543
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
..........++..|+|||+..+..++.++|||||||++|||++ |..||.....+.. ...++. ++..
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~~~~~-----------~~~~ 335 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FYKMIK-----------EGYR 335 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HHHHHH-----------hCcc
Confidence 32222223345678999999999999999999999999999998 8888865322211 111111 0000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.. .+...+.++.+++.+||+.+|++||++.|++++|++
T Consensus 336 ~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 336 ML-------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CC-------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 00 011234578999999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=356.99 Aligned_cols=258 Identities=24% Similarity=0.410 Sum_probs=203.3
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
++|+..+.||+|+||.||+|+.. ++..||||+++... ......+.+|+++++.+ +|+|||++++++...+
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~-- 115 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG-- 115 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC--
Confidence 46888999999999999999742 34579999997543 33456788999999999 8999999999998776
Q ss_pred hHHHHHhhccCCCCChhHhhhccC--------------------------------------------------------
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN-------------------------------------------------------- 801 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------------------------- 801 (1002)
..++||||+++|+|.++++...
T Consensus 116 --~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 116 --PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred --CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 6689999999999999886421
Q ss_pred -------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceee
Q 037042 802 -------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868 (1002)
Q Consensus 802 -------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 868 (1002)
..+++..+.+++.||++||+||| +++|+||||||+||++++++.+||+|||+++..........
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence 13677888999999999999999 89999999999999999999999999999987654332222
Q ss_pred eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhh
Q 037042 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947 (1002)
Q Consensus 869 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 947 (1002)
.....++..|||||++....++.++|||||||++|||++ |+.||........ .. +........
T Consensus 271 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~~------------~~~~~~~~~--- 334 (374)
T cd05106 271 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-FY------------KMVKRGYQM--- 334 (374)
T ss_pred ccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-HH------------HHHHcccCc---
Confidence 223345678999999988899999999999999999997 9999876432211 10 000000000
Q ss_pred hHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 948 IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 948 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
..+...+..+.+++.+||+.+|++||++.++++.|+++-
T Consensus 335 ---~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 ---SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ---cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 001112467889999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=377.14 Aligned_cols=460 Identities=30% Similarity=0.380 Sum_probs=286.7
Q ss_pred EEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCc-ccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPF-SIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 58 L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
+|+++.++. .||..+-+-..|+.|+++.|-+- ..|- .+.+.-+|+.||+++|+++ ..|..+. .+.+|+.|+++.|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it-~l~~L~~ln~s~n 78 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQIT-LLSHLRQLNLSRN 78 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhh-hHHHHhhcccchh
Confidence 566666666 66766666666777777777665 3332 2233344666666666665 5555552 3566666666666
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIP 216 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p 216 (1002)
.|. ..|.+.+++.+|++|.|.+|++. ..|..+..+.+|++|++|.|++. .+|
T Consensus 79 ~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~--------------------------~~P 130 (1081)
T KOG0618|consen 79 YIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG--------------------------PIP 130 (1081)
T ss_pred hHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC--------------------------CCc
Confidence 665 55566666666666666666665 55666666666666666666654 355
Q ss_pred ccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccC
Q 037042 217 NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNAS 296 (1002)
Q Consensus 217 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 296 (1002)
.-+..++.++.+++++|......+. ..++.++|..|.+.+.++..+.++.
T Consensus 131 l~i~~lt~~~~~~~s~N~~~~~lg~------------------------------~~ik~~~l~~n~l~~~~~~~i~~l~ 180 (1081)
T KOG0618|consen 131 LVIEVLTAEEELAASNNEKIQRLGQ------------------------------TSIKKLDLRLNVLGGSFLIDIYNLT 180 (1081)
T ss_pred hhHHhhhHHHHHhhhcchhhhhhcc------------------------------ccchhhhhhhhhcccchhcchhhhh
Confidence 5555555566666665521111111 1255666666666666666655555
Q ss_pred CCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccccccc
Q 037042 297 KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHS 376 (1002)
Q Consensus 297 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 376 (1002)
. .|||.+|++. . ..+.++.+|+.|....|++..+.. ..++|+.|+.++|.+..+ .....+.+
T Consensus 181 ~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~~---------~g~~l~~L~a~~n~l~~~----~~~p~p~n 242 (1081)
T KOG0618|consen 181 H--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELEI---------SGPSLTALYADHNPLTTL----DVHPVPLN 242 (1081)
T ss_pred e--eeecccchhh-h--hhhhhccchhhhhhhhcccceEEe---------cCcchheeeeccCcceee----cccccccc
Confidence 5 5677776665 1 235566666677777776666542 235666666666666632 12223456
Q ss_pred ccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccC
Q 037042 377 LKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSN 456 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 456 (1002)
|+++++++|++++ +|++++.+.+|+.+...+|+|+ .+|..+...++|+.|....|.+. .+|+....++.|++|||..
T Consensus 243 l~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 243 LQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQS 319 (1081)
T ss_pred ceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehh
Confidence 6677777777663 4466777777777777777764 55666666666666666666666 5555556666666666666
Q ss_pred CcCCccCCccc-------------------------cCCccCcccccccccccccCCccccccccCceeeccCCCCCCCC
Q 037042 457 NKLSGSIPACF-------------------------GDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511 (1002)
Q Consensus 457 N~l~~~~p~~~-------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 511 (1002)
|+|...++..| ..++.|+.|++.+|.++...-+.+-+..+|+.|+|++|+|....
T Consensus 320 N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fp 399 (1081)
T KOG0618|consen 320 NNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFP 399 (1081)
T ss_pred ccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCC
Confidence 66653222111 12345777777777777766666777777888888888777555
Q ss_pred cccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC
Q 037042 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS 591 (1002)
Q Consensus 512 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 591 (1002)
...+.++..|++|+||+|+++ .+|+.+..+..|+.|...+|+|. ..| .+..++.|+.+|+|.|+|+...-..-...+
T Consensus 400 as~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p 476 (1081)
T KOG0618|consen 400 ASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSP 476 (1081)
T ss_pred HHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCc
Confidence 555677777888888888877 55677777788888888888777 566 677778888888888877753322222337
Q ss_pred ccceeeCCCCcC
Q 037042 592 YLKDLNLSFNKL 603 (1002)
Q Consensus 592 ~L~~L~Ls~N~l 603 (1002)
+|++|||+||..
T Consensus 477 ~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 477 NLKYLDLSGNTR 488 (1081)
T ss_pred ccceeeccCCcc
Confidence 788888888774
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=344.33 Aligned_cols=257 Identities=28% Similarity=0.458 Sum_probs=219.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC---C--cEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD---G--MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.+.....++||.|-||.||+|.+.+ | -.||||..+.++ ....+.|..|..+|+.++||||++++|+|.+..
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P--- 464 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP--- 464 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc---
Confidence 3445556889999999999997532 3 358999988753 445788999999999999999999999998764
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++|||.++-|.|..|++..+..++......++.||+.||+||| +.++|||||..+|||+.....||++|||+++
T Consensus 465 --~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 465 --MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred --eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhh
Confidence 58999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
.+.+...+.. +...-+..|||||.+.-.+++.++|||.|||.+||+++ |..||....+.+. +..+
T Consensus 540 ~~ed~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV-------------I~~i 605 (974)
T KOG4257|consen 540 YLEDDAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV-------------IGHI 605 (974)
T ss_pred hccccchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce-------------EEEe
Confidence 9887665533 33445778999999999999999999999999999998 9999987544332 2222
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
. .+.+...|+.|+..++.+|.+||.++|.+||++.|+...|..+..
T Consensus 606 E-------nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 606 E-------NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred c-------CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 2 233445677899999999999999999999999999988887765
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=329.53 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=208.5
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
-+|++.+.||+|.||.|-+|.. ..|+.||||.+++.. +...-.+++||+||+.++||||+++|.+|...+ -.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd----KI 128 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD----KI 128 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc----eE
Confidence 3577788999999999999974 679999999998653 334456889999999999999999999998777 66
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
.+||||..+|.|.||+.+.+. +++.+++.++.||.+|+.|+| +++|+|||+|.+|||+|.++++||+|||++-.+.
T Consensus 129 vivMEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 799999999999999988765 899999999999999999999 9999999999999999999999999999998776
Q ss_pred CCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
...-. +.++|.+-|.+||++.+.+| ++.+|-||+||++|-|+.|..||++..- ... +.+|-.+
T Consensus 205 ~~kfL---qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-----k~l--------vrQIs~G 268 (668)
T KOG0611|consen 205 DKKFL---QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-----KRL--------VRQISRG 268 (668)
T ss_pred cccHH---HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-----HHH--------HHHhhcc
Confidence 54432 56789999999999999988 6889999999999999999999987321 111 1223333
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....+. .+....-+|+.|+.++|++|.|+.+|..|-|
T Consensus 269 aYrEP~---------~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 269 AYREPE---------TPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred cccCCC---------CCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 322221 2345667899999999999999999998865
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=319.03 Aligned_cols=255 Identities=22% Similarity=0.342 Sum_probs=205.0
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.+.|+..+.||+|+|+.||+.. ..+|+.+|+|+++-. .....+.+++|+++-+.++|||||++.+.+.+.. +.
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~----~~ 85 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES----FH 85 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc----ee
Confidence 3568888899999999999985 557999999988632 3446788999999999999999999999887766 77
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~ 858 (1002)
++|+|+|+|++|..-+-.. ...++..+-..++||++|+.|+| .++|||||+||+|+++. ...-+|++|||+|.
T Consensus 86 ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred EEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEE
Confidence 8999999999996443322 34677788889999999999999 99999999999999994 45569999999999
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
.+.... ...+.+||++|||||+++..+|+..+|||+.||++|-|+.|++||.+...... ..+|.
T Consensus 162 ~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rl-------------ye~I~ 225 (355)
T KOG0033|consen 162 EVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-------------YEQIK 225 (355)
T ss_pred EeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHH-------------HHHHh
Confidence 887332 44788999999999999999999999999999999999999999987322211 01111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.+...... .......+...+++.+|+..||.+|.|+.|+++|-|-
T Consensus 226 ~g~yd~~~----~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 226 AGAYDYPS----PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWI 270 (355)
T ss_pred ccccCCCC----cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence 11111111 1123455678899999999999999999999988663
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=309.76 Aligned_cols=255 Identities=26% Similarity=0.343 Sum_probs=208.0
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeeccc--------chhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC--------GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
-..|...+.+|+|..++|.+.. ..+|..+|+|++.... ....+....|+.+++++ .||+|+++.+++...
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 3567888999999999999886 4578999999986321 12345667799999998 699999999999877
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
. +.++|+|.|+.|.|.|++...- .+++...++|+.|+.+|++||| .+.|||||+||+|||++++.++||+||
T Consensus 96 s----F~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 96 A----FVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred c----hhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEecc
Confidence 7 8899999999999999997654 5899999999999999999999 999999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCC------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSE------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
|+|+.+.++++. ...+||++|+|||.+.. ..|+..+|+||.||+||-++.|.+||...-.-- +
T Consensus 168 GFa~~l~~GekL---relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml------M-- 236 (411)
T KOG0599|consen 168 GFACQLEPGEKL---RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML------M-- 236 (411)
T ss_pred ceeeccCCchhH---HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH------H--
Confidence 999999887754 56789999999997653 468899999999999999999999985421100 0
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
+..|..+...... ..+.+.+....++|.+|++.||++|.|++|+++|-.-
T Consensus 237 -----LR~ImeGkyqF~s----peWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 237 -----LRMIMEGKYQFRS----PEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred -----HHHHHhcccccCC----cchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 1122222222111 1234567789999999999999999999999998553
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=348.86 Aligned_cols=242 Identities=22% Similarity=0.310 Sum_probs=200.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|...++||+|.||.|+.|..+ +++.+|||++++.. .+..+..+.|.+|+... +||.+++++.+|...+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~---- 442 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE---- 442 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC----
Confidence 467999999999999999999865 68899999998864 34567778899988887 5999999999999888
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
+.+.||||+.||++..+.+. ..+++..+..+|..|+.||.||| .++|||||||-+|||+|.+|.+||+|||+++.
T Consensus 443 ~l~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred eEEEEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccc
Confidence 78899999999994443332 35899999999999999999999 99999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
--..+. .+...+||+.|||||++.+..|+.++|.|||||+||||+.|..||.+..+++. ...|+.
T Consensus 518 ~m~~g~--~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~-------------FdsI~~ 582 (694)
T KOG0694|consen 518 GMGQGD--RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV-------------FDSIVN 582 (694)
T ss_pred cCCCCC--ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-------------HHHHhc
Confidence 432222 34678999999999999999999999999999999999999999986433321 112222
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA 978 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~ 978 (1002)
.... .|.-++.+..+|+++++.++|++|..+
T Consensus 583 d~~~--------yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 583 DEVR--------YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCC--------CCCcccHHHHHHHHHHhccCcccccCC
Confidence 2221 123356778899999999999999976
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=341.26 Aligned_cols=269 Identities=17% Similarity=0.190 Sum_probs=202.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~ 76 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG----KLY 76 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC----EEE
Confidence 36888999999999999999865 68899999987542 234567788999999999999999999987766 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||++++.+..+... ...+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 77 lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 77 LVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred EEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 99999998777655433 345889999999999999999999 89999999999999999999999999999987643
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH-----------HHHh
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN-----------DWLL 931 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~-----------~~~~ 931 (1002)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...... ....
T Consensus 153 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 153 GSNA-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred cccc-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHhhhc
Confidence 3211 12345688999999999888899999999999999999999999976322111 100000 0000
Q ss_pred h-hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 932 I-SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 932 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. .......+................+..+.+++.+|++++|++|||++|+++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0 0000000000011111111122356779999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=345.39 Aligned_cols=247 Identities=25% Similarity=0.298 Sum_probs=201.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~ 76 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR----FL 76 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC----eE
Confidence 36888999999999999999865 68999999987532 234566888999999999999999999887665 66
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 77 YMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred EEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 89999999999999997655 4888999999999999999999 8999999999999999999999999999998664
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .+....
T Consensus 153 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-----~~~~--------~i~~~~ 214 (291)
T cd05612 153 DRT-----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-----GIYE--------KILAGK 214 (291)
T ss_pred CCc-----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHhCC
Confidence 321 2346899999999998888999999999999999999999999753211 1111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L~ 986 (1002)
... +......+.+++.+|++.||.+||+ ++|+++|-+
T Consensus 215 ~~~--------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 215 LEF--------PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred cCC--------CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcc
Confidence 110 1122456889999999999999995 999998854
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=341.51 Aligned_cols=250 Identities=20% Similarity=0.296 Sum_probs=199.9
Q ss_pred CCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 708 FSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
|+..+.||+|+||+||+|.. .+|+.||||++.+.. ......+.+|++++++++|++|+++++++...+ ..++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~----~~~l 77 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD----ALCL 77 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC----eEEE
Confidence 67789999999999999985 579999999987542 122345778999999999999999999987766 5689
Q ss_pred hhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||++.....
T Consensus 78 v~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 78 VLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred EEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 999999999998876543 35889999999999999999999 89999999999999999999999999999987543
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... .....||..|+|||++.+..++.++|||||||++|||++|+.||........ ...... .+.....
T Consensus 155 ~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~~~--------~~~~~~~ 222 (285)
T cd05631 155 GET---VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEVDR--------RVKEDQE 222 (285)
T ss_pred CCe---ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHHHH--------Hhhcccc
Confidence 322 2345789999999999999999999999999999999999999976432111 011000 0000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTR 984 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~ 984 (1002)
..+...+..+.+++.+||+.+|++||+ ++++++|
T Consensus 223 --------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 223 --------EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred --------cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 011123456889999999999999997 8999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=336.05 Aligned_cols=255 Identities=21% Similarity=0.385 Sum_probs=204.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.+|++.+.||+|+||.||+|++. .+..||+|+++.... .....+.+|+.++++++||||+++++++..++ .
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~ 80 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN----T 80 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC----C
Confidence 46888899999999999999753 367899999876532 33467889999999999999999999988766 6
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++......+++.+++.++.|++.|++||| +++++||||||+||+++.++.+|++|||.+...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 78999999999999999876667899999999999999999999 899999999999999999999999999987654
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... .......++..|+|||+..+..++.++|||||||++||+++ |+.||...... .... .+.+
T Consensus 158 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-----~~~~--------~~~~ 223 (266)
T cd05064 158 KSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-----DVIK--------AVED 223 (266)
T ss_pred cccch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHH--------HHHC
Confidence 32211 11122345678999999988999999999999999999775 99998753221 1111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
.... ..+..++..+.+++.+||+.+|++||++.++.+.|.++
T Consensus 224 ~~~~-------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 224 GFRL-------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCC-------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 1100 01234567799999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=350.06 Aligned_cols=246 Identities=21% Similarity=0.243 Sum_probs=201.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+.+|+.++++++||||+++++++...+ ..
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~ 93 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN----RV 93 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC----EE
Confidence 56888999999999999999865 68999999987542 233467889999999999999999999998776 67
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 94 YFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred EEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 89999999999999997654 4788889999999999999999 8999999999999999999999999999998764
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... ..+..+.
T Consensus 170 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----~~~--------~~i~~~~ 231 (329)
T PTZ00263 170 DRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-----RIY--------EKILAGR 231 (329)
T ss_pred CCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-----HHH--------HHHhcCC
Confidence 332 2346899999999999988999999999999999999999999653211 111 1111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRL 985 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L 985 (1002)
... +......+.+++.+||+.||.+||+ ++|++.|-
T Consensus 232 ~~~--------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 232 LKF--------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred cCC--------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 111 1112356789999999999999997 78988774
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=344.41 Aligned_cols=259 Identities=25% Similarity=0.392 Sum_probs=207.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCc----EEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGM----EVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|+..+.||+|+||+||+|++. +++ .||+|++.... ......+..|+.+++.++||||+++++++....
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~---- 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC----
Confidence 46899999999999999999854 343 48999987543 344567889999999999999999999987643
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++|+||+++|+|.+++......+++..+..++.||+.||+||| +++|+||||||+||++++++.+||+|||+++.
T Consensus 83 -~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 83 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred -ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEcccccccc
Confidence 46899999999999999887667889999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
+.............++..|+|||+..+..++.++|||||||++|||++ |+.||...... ++.. +.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-----~~~~---------~~ 224 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISS---------IL 224 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHH---------HH
Confidence 765443323233445678999999998899999999999999999998 99998653211 1111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
....... .+..+...+.+++.+||..+|.+||++.+++.++.++....
T Consensus 225 ~~~~~~~------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 225 EKGERLP------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred hCCCCCC------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 0000000 01124456889999999999999999999999999886543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=356.88 Aligned_cols=269 Identities=22% Similarity=0.271 Sum_probs=216.0
Q ss_pred CCCCCceeeccCcceEEEEEeCCC-cEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeee-EEecC-chh-hHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQDG-MEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIIS-CCSIG-DFK-ALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~-~~~~~-~~~-~~~~ 781 (1002)
++++.+.|.+|||+.||.|+...+ ..||+|++-..++.....+.+||++|+++. |+|||.+++ ..... ... ...+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 567789999999999999987655 999999987777788899999999999996 999999999 33221 112 3456
Q ss_pred HHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
+|.||||+||.|-|++.... ..+++.++++|+.|+++|+++||.. ..+|||||||-+|||++.++..||||||.|+..
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 79999999999999997532 2599999999999999999999954 788999999999999999999999999998753
Q ss_pred cCCC-cee------eeccCCCCccccccccc---CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 861 TRED-QFV------TQTQTPATIGYMALEYG---SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 861 ~~~~-~~~------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
.... ... ..-...-|+.|+|||++ .+...++|+|||++||+||-|+....||+....
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------------- 263 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------------- 263 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------------
Confidence 2211 100 01123468899999964 566789999999999999999999999987422
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCCCCC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGYPSY 999 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~~~y 999 (1002)
..|.++....+.. +..+..+.+||..||+++|++||++-+|+.++.++.+....-..-|
T Consensus 264 ----laIlng~Y~~P~~------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 264 ----LAILNGNYSFPPF------PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDIY 322 (738)
T ss_pred ----eeEEeccccCCCC------ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence 2455554433332 3567889999999999999999999999999999987665544444
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=340.45 Aligned_cols=267 Identities=18% Similarity=0.232 Sum_probs=200.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..++||+|+||+||+|+.. +++.||+|+++... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~ 79 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER----CLT 79 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC----eEE
Confidence 357999999999999999999854 68999999987542 223456778999999999999999999987665 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++ +|.+++...+..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 80 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred EEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 99999975 999998776666889999999999999999999 89999999999999999999999999999976543
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh---h------
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL---I------ 932 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~---~------ 932 (1002)
... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||......+. +......... +
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 156 PTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred CCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhccc
Confidence 221 2234567889999998765 5689999999999999999999999975322111 1111110000 0
Q ss_pred ---hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 933 ---SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 933 ---~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.......+....... ............+++.+|+++||.+|||++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPL--INHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cchhhhccccCccCCCch--HHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000000000 00011234567899999999999999999999976
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-38 Score=348.20 Aligned_cols=242 Identities=23% Similarity=0.281 Sum_probs=196.1
Q ss_pred ceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 712 NLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
+.||+|+||.||+|+. .+|+.||+|++++.. ......+.+|++++++++||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~~~lv~e~ 76 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD----RLCFVMEY 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC----EEEEEEeC
Confidence 4699999999999985 478999999997542 233456778999999999999999999988776 66899999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCcee
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV 867 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 867 (1002)
+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-- 150 (323)
T cd05571 77 ANGGELFFHLSRER-VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA-- 150 (323)
T ss_pred CCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC--
Confidence 99999999987654 5889999999999999999999 89999999999999999999999999999875432221
Q ss_pred eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhh
Q 037042 868 TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947 (1002)
Q Consensus 868 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 947 (1002)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+......
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~~~--------~~~~~~~~---- 213 (323)
T cd05571 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFE--------LILMEEIR---- 213 (323)
T ss_pred cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH-----HHHH--------HHHcCCCC----
Confidence 123456899999999999999999999999999999999999999653211 1111 01111100
Q ss_pred hHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 948 IQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 948 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
.+......+.+++.+||+.||++|| ++.++++|
T Consensus 214 ----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 214 ----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred ----CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 1122346688999999999999999 89999876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=339.57 Aligned_cols=256 Identities=23% Similarity=0.366 Sum_probs=212.1
Q ss_pred CCceeeccCcceEEEEEeC--CCc--EEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 710 ENNLIGRGGFGSVYKARIQ--DGM--EVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
..++||+|.||+|++|.|. .|+ .||||+++..... ....|.+|+.+|.+++|||++++||+..+. -.++|
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q-----p~mMV 188 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ-----PAMMV 188 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc-----hhhHH
Confidence 3478999999999999876 344 4899999866544 678999999999999999999999998764 35799
Q ss_pred hccCCCCChhHhhhc-cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYS-SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+|.++.|+|.+.+++ .+..+-......++.|||.||.||. .+++||||+.++|+++-....|||+|||+.+.+...
T Consensus 189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 999999999999988 4446777888899999999999999 999999999999999999999999999999999877
Q ss_pred Cceeeecc-CCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 864 DQFVTQTQ-TPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 864 ~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
+....+.. ..-++.|.|||.++...++.++|||+|||++|||+| |..||.+.... ++.+.+|.
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--------------qIL~~iD~- 330 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--------------QILKNIDA- 330 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--------------HHHHhccc-
Confidence 76655543 456778999999999999999999999999999999 88898764221 12222221
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
..+...++.|++.++++|..||...|.+|||+.++.+.+-.......
T Consensus 331 -----~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaqp~ 377 (1039)
T KOG0199|consen 331 -----GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQPA 377 (1039)
T ss_pred -----cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCCc
Confidence 12233466799999999999999999999999999866554444333
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=350.66 Aligned_cols=253 Identities=19% Similarity=0.279 Sum_probs=202.8
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+|++.+.||+|+||.||+|+.. +++.||||++.+.. ......+..|++++++++||||+++++++...+ ..+
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~----~~~ 77 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE----YLY 77 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC----EEE
Confidence 6888999999999999999865 58999999997542 223466788999999999999999999998776 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 78 lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 78 LAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 9999999999999997654 4888999999999999999999 89999999999999999999999999999976543
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....... .........
T Consensus 154 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-----~~~~i~~--~~~~~~~~~ 221 (333)
T cd05600 154 -----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-----TWENLKY--WKETLQRPV 221 (333)
T ss_pred -----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-----HHHHHHh--ccccccCCC
Confidence 1234568999999999998899999999999999999999999997532211 1110000 000000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
... .....+..+.+++.+|+..+|++||++.|+++|-
T Consensus 222 ~~~------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 222 YDD------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred CCc------cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence 000 0012356788999999999999999999999883
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=341.97 Aligned_cols=272 Identities=20% Similarity=0.243 Sum_probs=202.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~ 79 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE----TLT 79 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC----eEE
Confidence 467999999999999999999865 689999999875432 23346778999999999999999999998766 668
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||++ +++.+++......++...+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 80 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 80 LVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 9999995 5888888776566889999999999999999999 89999999999999999999999999999875433
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh---h---h
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS---I---M 935 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~---~ 935 (1002)
... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.........+........... . .
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
T cd07869 156 PSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVH 233 (303)
T ss_pred CCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchh
Confidence 221 2234568899999998765 45889999999999999999999999764322111111111000000 0 0
Q ss_pred h--cccCccC---Chhh-hHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 K--IVDGSLL---SRED-IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~--i~~~~~~---~~~~-~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. ..++... .... ...+........+.+++.+|++.||++|||+.|+++|=.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~ 290 (303)
T cd07869 234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEY 290 (303)
T ss_pred hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcc
Confidence 0 0000000 0000 011111112356789999999999999999999998743
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=306.89 Aligned_cols=266 Identities=20% Similarity=0.280 Sum_probs=212.1
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch-hhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF-KALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 782 (1002)
.++|++.+.+|+|||+-||.++ ..+++.+|+|++.-...+..+...+|++..++++||||++++++...+.. .....|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4689999999999999999998 67899999999876666778889999999999999999999988755432 122457
Q ss_pred HhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
+++.|...|+|.+.++.. +..+++.++++|+.+|++||++||.. ..+++||||||.||++++++.+++.|||.++.
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 999999999999988753 44799999999999999999999932 34599999999999999999999999999876
Q ss_pred ccCCC-------ceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH
Q 037042 860 LTRED-------QFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 860 ~~~~~-------~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
..-.- ..........|..|.|||.+.- ...++++|||||||++|+|+.|..||+.....+..+.
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla------ 252 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA------ 252 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE------
Confidence 53211 1111233457889999997654 3468999999999999999999999988665444321
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
..+..+....+... ..+..+.++++.|+++||.+||++.+++.++..+
T Consensus 253 -----LAv~n~q~s~P~~~------~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 253 -----LAVQNAQISIPNSS------RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -----EeeeccccccCCCC------CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 12333333333221 1457799999999999999999999999998764
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=324.94 Aligned_cols=276 Identities=22% Similarity=0.236 Sum_probs=207.2
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCC-cceeeeEEecCch--hhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRN-IIKIISCCSIGDF--KAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~--~~~ 779 (1002)
..|+..++||+|+||+||+|+. .+|+.||+|+++-.. +.......+|+.+++.++|+| ||++++++..... ...
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 3466778899999999999984 478999999987543 346677889999999999999 9999999877552 112
Q ss_pred HHHHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++|+||++. +|.+++.... ..++...++.++.|+++|++||| +++|+||||||+|||++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence 34689999966 9999998765 34777889999999999999999 99999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--h
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--S 933 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~ 933 (1002)
|+...-+.. ..+..++|.+|.|||++.+. .|+..+||||+||+++||+++++-|.+..+ ..++....+-.... +
T Consensus 167 Ara~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 167 ARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRLLGTPNEK 243 (323)
T ss_pred HHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHHcCCCCcc
Confidence 997664333 34667899999999998876 699999999999999999999988876433 11222222111100 0
Q ss_pred ----hhhcccCccC--ChhhhHHHhH--HHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhh
Q 037042 934 ----IMKIVDGSLL--SREDIQFVAK--EQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKI 988 (1002)
Q Consensus 934 ----~~~i~~~~~~--~~~~~~~~~~--~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i 988 (1002)
.....+.... .......... +.......+++.+|++.+|.+|.|++++++| +..+
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 1111111100 0000011100 0111468899999999999999999999998 5444
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=337.22 Aligned_cols=256 Identities=30% Similarity=0.539 Sum_probs=205.9
Q ss_pred cCCCCCceeeccCcceEEEEEeCC------CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
++|+..+.||+|+||.||+|.... +..||+|.+.... ......+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ--- 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC---
Confidence 468888999999999999997542 2579999987543 234567889999999999999999999987665
Q ss_pred HHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee
Q 037042 779 LFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL 843 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl 843 (1002)
..+++|||+++|+|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||++
T Consensus 82 -~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~ 157 (283)
T cd05048 82 -PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLV 157 (283)
T ss_pred -ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEE
Confidence 5679999999999999987542 34778889999999999999999 8999999999999999
Q ss_pred CCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccH
Q 037042 844 GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTL 922 (1002)
Q Consensus 844 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~ 922 (1002)
++++.+||+|||+++...............+++.|+|||...+..++.++|||||||++|||++ |..||......
T Consensus 158 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~---- 233 (283)
T cd05048 158 GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ---- 233 (283)
T ss_pred cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 9999999999999987654433223344567888999999888889999999999999999998 99998753221
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
+... .+..+.... .+..++..+.+++.+||+.+|.+||++.|++++|+++
T Consensus 234 -~~~~--------~i~~~~~~~-------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 234 -EVIE--------MIRSRQLLP-------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred -HHHH--------HHHcCCcCC-------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1111 111111110 1234567899999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=348.55 Aligned_cols=247 Identities=20% Similarity=0.243 Sum_probs=201.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC--CcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD--GMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||.||+|+... +..||+|++.+.. ....+.+.+|+++++.++||||+++++++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~---- 104 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES---- 104 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC----
Confidence 3569999999999999999997543 4689999986532 234567888999999999999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKV 180 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCee
Confidence 5689999999999999997665 4889999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... ....||+.|||||++.+..++.++||||+||++|||++|+.||...... .. ...+..
T Consensus 181 ~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~--------~~~i~~ 242 (340)
T PTZ00426 181 VDTRT-----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-----LI--------YQKILE 242 (340)
T ss_pred cCCCc-----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-----HH--------HHHHhc
Confidence 64322 2346899999999998888999999999999999999999999763221 00 011111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRL 985 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L 985 (1002)
..... +......+.+++.+|++.+|++|+ +++|+++|-
T Consensus 243 ~~~~~--------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp 285 (340)
T PTZ00426 243 GIIYF--------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHP 285 (340)
T ss_pred CCCCC--------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCC
Confidence 11111 112234578999999999999995 899999883
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=372.47 Aligned_cols=503 Identities=27% Similarity=0.287 Sum_probs=365.1
Q ss_pred CCCcccccEeeCC-CCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEeccccccccc
Q 037042 39 SFCNWTGVTCDVH-SHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117 (1002)
Q Consensus 39 ~~c~w~gv~c~~~-~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i 117 (1002)
.+|+-+-|.-.-. ...++.|++.+|-+....-+.+..--+|++|||++|++. ..|..+..+.+|+.|+++.|.+. .+
T Consensus 6 s~~~l~~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~v 83 (1081)
T KOG0618|consen 6 SDEQLELIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SV 83 (1081)
T ss_pred ccccCcccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hC
Confidence 3455554433221 234888999999877432233444445999999999998 89999999999999999999998 78
Q ss_pred CcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHH
Q 037042 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQI 197 (1002)
Q Consensus 118 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 197 (1002)
|.++ +++.+|++|+|.+|++. ..|.++..+.+|++||+|+|++. .+|..+..++.++++..++|......+...
T Consensus 84 p~s~-~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~--- 157 (1081)
T KOG0618|consen 84 PSSC-SNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTS--- 157 (1081)
T ss_pred chhh-hhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcccc---
Confidence 8655 78999999999999998 89999999999999999999997 999999999999999999993222211111
Q ss_pred hhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchh
Q 037042 198 FVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277 (1002)
Q Consensus 198 ~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 277 (1002)
+ ..+.+..|.....++.++..++. .|||.+|++. -..+.++.+|+.|....|+++... ...++|+.|
T Consensus 158 -i--k~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~-----~~g~~l~~L 224 (1081)
T KOG0618|consen 158 -I--KKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE-----ISGPSLTAL 224 (1081)
T ss_pred -c--hhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEE-----ecCcchhee
Confidence 1 23344455556677778877777 7899999886 245667788888888888886221 234688888
Q ss_pred hcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCC
Q 037042 278 YLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357 (1002)
Q Consensus 278 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls 357 (1002)
+.++|.++...+ -+...+|+++++++|++++. |++++.+.+|+.|+..+|+++.+|..+ ....+|+.|++.
T Consensus 225 ~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l~~lp~ri------~~~~~L~~l~~~ 295 (1081)
T KOG0618|consen 225 YADHNPLTTLDV--HPVPLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRLVALPLRI------SRITSLVSLSAA 295 (1081)
T ss_pred eeccCcceeecc--ccccccceeeecchhhhhcc-hHHHHhcccceEecccchhHHhhHHHH------hhhhhHHHHHhh
Confidence 888888873332 23356788899999998855 588888889999999999888888764 455667777777
Q ss_pred CCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCC-CCEEEccCCccc
Q 037042 358 SNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQK-LQVLYFPDNKLE 436 (1002)
Q Consensus 358 ~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~ 436 (1002)
+|.++.+ |.....+++|+.|+|..|+|....+..|..+.. |+.|+.+.|++.
T Consensus 296 ~nel~yi---------------------------p~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~ 348 (1081)
T KOG0618|consen 296 YNELEYI---------------------------PPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS 348 (1081)
T ss_pred hhhhhhC---------------------------CCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc
Confidence 7766544 445555667777777777776444434444433 667777777776
Q ss_pred ccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCccccc
Q 037042 437 GSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG 516 (1002)
Q Consensus 437 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 516 (1002)
....-.=..++.|+.|++.+|.++...-..+.++++|+.|+|++|++..+....+.++..|+.|+||+|+|+ .+|..+.
T Consensus 349 ~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva 427 (1081)
T KOG0618|consen 349 TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVA 427 (1081)
T ss_pred ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHH
Confidence 333222223566778888888887766666777788888888888887777777788888888888888888 4677888
Q ss_pred ccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCcccee
Q 037042 517 NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDL 596 (1002)
Q Consensus 517 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 596 (1002)
.+..|++|...+|++. ..| .+..+++|+.+|+|.|+|+...-..-...++|++|||++|.=.-..-..|..++++...
T Consensus 428 ~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~ 505 (1081)
T KOG0618|consen 428 NLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQM 505 (1081)
T ss_pred hhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhhe
Confidence 8888888888888887 556 77788888888888888875432222223788888888887322344556666677777
Q ss_pred eCCCC
Q 037042 597 NLSFN 601 (1002)
Q Consensus 597 ~Ls~N 601 (1002)
+++-|
T Consensus 506 ~i~~~ 510 (1081)
T KOG0618|consen 506 DITLN 510 (1081)
T ss_pred ecccC
Confidence 76666
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=330.80 Aligned_cols=251 Identities=26% Similarity=0.392 Sum_probs=202.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..+.||+|+||.||+|+++++..||+|.+.... .....+..|++++++++||||+++++++...+ ..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK----PLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCC----CEEEEE
Confidence 4578889999999999999998888899999886442 23467888999999999999999999987766 568999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++|+|.++++.....+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||.++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 999999999999765556899999999999999999999 89999999999999999999999999999986543322
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......++..|+|||+..+..++.++|||||||++|||++ |+.||...... +... .+.......
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-----~~~~--------~i~~~~~~~ 221 (256)
T cd05114 156 T-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-----EVVE--------MISRGFRLY 221 (256)
T ss_pred e-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHH--------HHHCCCCCC
Confidence 1 2233345678999999988889999999999999999999 89998653211 1111 111110000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.+...+..+.+++.+||+++|++||+++|+++.|
T Consensus 222 -------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 222 -------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0111235689999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=343.63 Aligned_cols=268 Identities=21% Similarity=0.252 Sum_probs=204.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||.||+|+.. +|..||+|++.... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~ 79 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG----EIS 79 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----EEE
Confidence 367999999999999999999865 68899999987653 234567899999999999999999999988766 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
+||||+++|+|.+++...+ .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||++....
T Consensus 80 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (331)
T ss_pred EEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence 9999999999999997654 4888999999999999999999 54 69999999999999999999999999997654
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh----c
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK----I 937 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~----i 937 (1002)
... .....||..|+|||++.+..++.++|||||||++|||++|+.||...... .+.............. +
T Consensus 156 ~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 229 (331)
T cd06649 156 DSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRPVVDGEEGEPHSI 229 (331)
T ss_pred ccc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhcccccccccCCcccc
Confidence 322 13346899999999999889999999999999999999999999653221 1111111000000000 0
Q ss_pred ----------ccCc----cCChhh-----------hHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 ----------VDGS----LLSRED-----------IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ----------~~~~----~~~~~~-----------~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+. ...... ............+.+++.+||+++|++|||+.|+++|-+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 230 SPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred CcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 0000 000000 000000123567899999999999999999999999975
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=322.87 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=208.6
Q ss_pred cCCCCCceeeccCcceEEEEEeCC-CcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
+.|+..+.||+|.-|+||.++.++ +..+|+|++.+.. ......++.|.+|++.++||.++.+|+.+.... +.
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~----~~ 152 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK----YS 152 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc----ee
Confidence 357777899999999999999764 6899999998764 234566778999999999999999999999887 78
Q ss_pred HHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|+|||||+||+|...+++... .+++..++.+|..|+-||+||| ..|||+|||||+||||.++|.+.|+||.++...
T Consensus 153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 999999999999999887654 7999999999999999999999 999999999999999999999999999987533
Q ss_pred cCC---------------------------------Cce---------------------eeeccCCCCcccccccccCC
Q 037042 861 TRE---------------------------------DQF---------------------VTQTQTPATIGYMALEYGSE 886 (1002)
Q Consensus 861 ~~~---------------------------------~~~---------------------~~~~~~~gt~~y~aPE~~~~ 886 (1002)
... ... ......+||-.|+|||++.+
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 110 000 00112458999999999999
Q ss_pred CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhH
Q 037042 887 GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAME 966 (1002)
Q Consensus 887 ~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 966 (1002)
...+.++|.|+|||++|||+.|..||.+...... +..|+.+.+..+.. .+.+....|||++
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T-------------l~NIv~~~l~Fp~~------~~vs~~akDLIr~ 370 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET-------------LRNIVGQPLKFPEE------PEVSSAAKDLIRK 370 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh-------------HHHHhcCCCcCCCC------CcchhHHHHHHHH
Confidence 9999999999999999999999999987544322 33444443333322 2456789999999
Q ss_pred ccccCCCCCCC----HHHHHHH
Q 037042 967 CTVESPEKRIN----AKEIVTR 984 (1002)
Q Consensus 967 cl~~~P~~Rpt----~~evl~~ 984 (1002)
.|.+||.+|.. +.||-+|
T Consensus 371 LLvKdP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 371 LLVKDPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred HhccChhhhhccccchHHhhcC
Confidence 99999999998 8888877
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=345.63 Aligned_cols=259 Identities=26% Similarity=0.446 Sum_probs=203.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+..|+++++++ +|+||++++++|...+.
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~- 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG- 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC-
Confidence 47899999999999999999632 35789999987543 23346678899999999 89999999998865432
Q ss_pred hHHHHHhhccCCCCChhHhhhccC--------------------------------------------------------
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN-------------------------------------------------------- 801 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------------------------- 801 (1002)
..+++|||+++|+|.+++....
T Consensus 86 --~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 86 --PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred --CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 4568999999999999886422
Q ss_pred ----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcc
Q 037042 802 ----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877 (1002)
Q Consensus 802 ----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~ 877 (1002)
..+++..+..++.||+.|++||| +.+|+||||||+||++++++.+||+|||+++.+.............++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 25788999999999999999999 89999999999999999999999999999987654332222233456778
Q ss_pred cccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHH
Q 037042 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQC 956 (1002)
Q Consensus 878 y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 956 (1002)
|+|||++.+..++.++|||||||++|||++ |..||......+. +... +. +.... ..+...
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~~--------~~---~~~~~-------~~~~~~ 301 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCRR--------LK---EGTRM-------RAPEYA 301 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHHH--------Hh---ccCCC-------CCCccC
Confidence 999999999999999999999999999998 9999865322111 1110 00 00000 011223
Q ss_pred HHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 957 MSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 957 ~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
...+.+++.+||+.+|++||++.|++++|+++-
T Consensus 302 ~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 302 TPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 466899999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=332.98 Aligned_cols=247 Identities=26% Similarity=0.350 Sum_probs=204.4
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.|+..+.||.|+||.||-|+. .+.+.||||.+... ....+.++..|+.++++++|||++.+-|||..+. ..|
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~----TaW 102 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH----TAW 102 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc----hHH
Confidence 366678899999999999984 57889999998643 3445678999999999999999999999998776 789
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|||||-| +-.|++.-.+.++.+..+..|..+.+.||+||| +.+.||||||+.|||+++.|.||++|||.|..+.+
T Consensus 103 LVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 103 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 99999955 999999888888999999999999999999999 99999999999999999999999999999987765
Q ss_pred CCceeeeccCCCCccccccccc---CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYG---SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
. ..++||+.|||||++ ..+.|+-++||||+|++..||...++|...+-.- ..+.. +.+-..
T Consensus 179 A------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-SALYH---------IAQNes 242 (948)
T KOG0577|consen 179 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYH---------IAQNES 242 (948)
T ss_pred h------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-HHHHH---------HHhcCC
Confidence 4 346899999999975 4578999999999999999999999997553111 00111 111111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+.+. ..+-+..|.+++..|+++-|.+|||.+++++|-.
T Consensus 243 PtLq---------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 243 PTLQ---------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRF 280 (948)
T ss_pred CCCC---------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcch
Confidence 2221 1234577999999999999999999999998854
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=349.48 Aligned_cols=259 Identities=25% Similarity=0.425 Sum_probs=204.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 776 (1002)
.++|++.++||+|+||.||+|+.. .+..||||++.... ....+.+.+|+++++++. ||||+++++++...+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~- 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG- 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-
Confidence 457889999999999999999742 23479999997543 234567889999999996 999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-------------------------------------------------------
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN------------------------------------------------------- 801 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~------------------------------------------------------- 801 (1002)
..++||||+++|+|.++++...
T Consensus 115 ---~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 115 ---PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred ---ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 6789999999999999886421
Q ss_pred ----------------------------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCe
Q 037042 802 ----------------------------------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNV 841 (1002)
Q Consensus 802 ----------------------------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NI 841 (1002)
..+++..+..++.||++|++||| +.+|+||||||+||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Ni 268 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNV 268 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhE
Confidence 13677788899999999999999 89999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccc
Q 037042 842 LLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGM 920 (1002)
Q Consensus 842 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~ 920 (1002)
++++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.....+..
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred EEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 999999999999999987644332222233456788999999988889999999999999999997 9999875322111
Q ss_pred cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
... .+..+... ..+..++..+.+++.+||+.+|++||++.++.++|+++-
T Consensus 349 -~~~-----------~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 349 -FYN-----------KIKSGYRM-------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred -HHH-----------HHhcCCCC-------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 000 00000000 011235567899999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=335.88 Aligned_cols=259 Identities=31% Similarity=0.517 Sum_probs=208.9
Q ss_pred cCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----
Confidence 4688889999999999999974 235669999987665556678999999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhccC------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
..++||||+++++|.+++...+ ..+++..++.++.|++.||+||| +++++||||||+||++++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCC
Confidence 6789999999999999987532 24899999999999999999999 89999999999999999999
Q ss_pred cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHH
Q 037042 848 VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~ 926 (1002)
.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||....... ..
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-----~~ 232 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-----VI 232 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HH
Confidence 999999999986654333222234456778999999988889999999999999999998 899986542211 11
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. .+....... .+..++..+.+++.+||+.+|.+|||+.|+.+.|+++...
T Consensus 233 ~--------~i~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 233 E--------CITQGRVLQ-------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred H--------HHHcCCcCC-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1 111111100 0112345689999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=330.50 Aligned_cols=256 Identities=25% Similarity=0.458 Sum_probs=206.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||+||+|++. +...||||+++... ......+.+|+.++++++||||+++++++...+ .
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 79 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR----P 79 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC----c
Confidence 56888999999999999999864 24579999987543 334567888999999999999999999987766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++......+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||+++..
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 68999999999999999876667899999999999999999999 899999999999999999999999999999887
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
.............++..|+|||...+..++.++||||||+++|||++ |..||....... ... .+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~-----------~~~~ 223 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIK-----------AVED 223 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHH-----------HHHc
Confidence 53222222223345678999999988889999999999999999998 999986532211 111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
..... .+..++..+.+++.+||+.+|++||++.|++++|+++
T Consensus 224 ~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 224 GYRLP-------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 10000 0123456789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=336.16 Aligned_cols=248 Identities=33% Similarity=0.578 Sum_probs=194.4
Q ss_pred CceeeccCcceEEEEEeC-----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 711 NNLIGRGGFGSVYKARIQ-----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+.||.|+||.||+|.+. .+..|+||++.... ....+.+.+|++.+++++||||++++|++...+ ..++|
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~----~~~lv 79 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE----PLFLV 79 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS----SEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc----ccccc
Confidence 478999999999999876 36789999996543 334788999999999999999999999998555 35799
Q ss_pred hccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+||+++|+|.+++... ...+++..+..|+.||++||+||| +.+|+|+||+++||+++.++.+||+|||++......
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999999999887 557999999999999999999999 889999999999999999999999999999877443
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
..............|+|||.+....++.++||||||+++||+++ |+.||..... .++.... .++..
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-----~~~~~~~--------~~~~~ 223 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-----EEIIEKL--------KQGQR 223 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-----HHHHHHH--------HTTEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccc--------ccccc
Confidence 33333344567788999999988889999999999999999999 7888765421 1222111 11111
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.. .+..++..+.+++.+||..+|++||++.++++.|
T Consensus 224 ~~-------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 LP-------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TT-------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ce-------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 00 1123456788999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=343.13 Aligned_cols=242 Identities=22% Similarity=0.284 Sum_probs=195.6
Q ss_pred ceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 712 NLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
+.||+|+||.||+|+. .+|+.||+|++.+.. ......+.+|++++++++||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~----~~~lv~E~ 76 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----RLCFVMEY 76 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC----EEEEEEeC
Confidence 4699999999999985 468999999997542 233456778999999999999999999988776 56899999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCcee
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV 867 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 867 (1002)
+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-- 150 (323)
T cd05595 77 ANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-- 150 (323)
T ss_pred CCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC--
Confidence 99999998887654 4889999999999999999999 89999999999999999999999999999875432221
Q ss_pred eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhh
Q 037042 868 TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947 (1002)
Q Consensus 868 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 947 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ... .+......
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-----~~~--------~~~~~~~~---- 213 (323)
T cd05595 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----LFE--------LILMEEIR---- 213 (323)
T ss_pred ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-----HHH--------HHhcCCCC----
Confidence 2234568999999999998899999999999999999999999997532211 001 11111100
Q ss_pred hHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 948 IQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 948 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
.+...+..+.+++.+||+.+|++|| ++.++++|
T Consensus 214 ----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 214 ----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred ----CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 0122346688999999999999998 89999876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-38 Score=338.96 Aligned_cols=252 Identities=24% Similarity=0.319 Sum_probs=211.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|...+.+|+|+||.++.++.+ +++.||+|.+.-. ..........|+.++++++|||||.+.+.|...+. +.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~---~l 79 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ---LL 79 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCc---eE
Confidence 357888999999999999999744 6889999988643 23445578889999999999999999999988772 37
Q ss_pred HHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
+|||+||+||++.+.+.+.+ ..+++..+..++.|++.|+.||| +..|+|||||+.||++++++.|||+|||+|+.+
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence 89999999999999998876 47899999999999999999999 999999999999999999999999999999998
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......||+.||.||++.+.+|..|+||||+||++|||++-+++|....... . +.++...
T Consensus 157 ~~~~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~-----L--------i~ki~~~ 221 (426)
T KOG0589|consen 157 NPEDS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE-----L--------ILKINRG 221 (426)
T ss_pred CCchh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH-----H--------HHHHhhc
Confidence 87652 2345689999999999999999999999999999999999999998743221 1 1122221
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.. ...+.....++..+|..|+..+|+.||++.+++.+
T Consensus 222 ~~-------~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 LY-------SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred cC-------CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 11 11233456789999999999999999999999976
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=318.68 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=210.6
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
-|.+..+||+|+||.||+|..+ .|..||+|.+.-+ ...+++..||.+|++++.|+||++||.+.... ..++||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s----DLWIVM 107 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS----DLWIVM 107 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCC----ceEeeh
Confidence 3667789999999999999744 6999999987643 35678889999999999999999999775544 678999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
|||..|++.|.++..+.++.+.++..++...++||+||| ...-+|||||+.|||++.+|.+|++|||.|..+.+..
T Consensus 108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM- 183 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM- 183 (502)
T ss_pred hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhH-
Confidence 999999999999998889999999999999999999999 7778999999999999999999999999998765432
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
.......||+.|||||++..-.|..++||||+|++..||..|++||.+.++-.. +..+ + ..
T Consensus 184 -AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-------------IFMI--P---T~ 244 (502)
T KOG0574|consen 184 -AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-------------IFMI--P---TK 244 (502)
T ss_pred -HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-------------eEec--c---CC
Confidence 122456799999999999999999999999999999999999999988654321 1111 1 11
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....+..++.-+..+.++++.|+...|++|-|+.++++|-.
T Consensus 245 PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~F 285 (502)
T KOG0574|consen 245 PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTF 285 (502)
T ss_pred CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence 11222345566788999999999999999999999998843
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=345.49 Aligned_cols=269 Identities=20% Similarity=0.239 Sum_probs=198.2
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-HHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA-LFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~~~ 782 (1002)
+|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++....... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999854 68999999987432 233456889999999999999999999886543211 2357
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+. ++|.+++.... .+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 9999995 68999887654 4889999999999999999999 89999999999999999999999999999986533
Q ss_pred CCc-eeeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh----hhh
Q 037042 863 EDQ-FVTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI----SIM 935 (1002)
Q Consensus 863 ~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~----~~~ 935 (1002)
... ........||..|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+.+.... ...
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH--QLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHHHHHhCCCCHHHHH
Confidence 221 111234568999999998765 678999999999999999999999996532110 00111000000 000
Q ss_pred hcc-----------cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 936 KIV-----------DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 936 ~i~-----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
++. ......... . ........+.+++.+||+.+|++|||++|+++|-
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFS--Q-KFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchH--H-hcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 000 000000000 0 0012345678999999999999999999999883
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=337.29 Aligned_cols=255 Identities=27% Similarity=0.423 Sum_probs=211.7
Q ss_pred cCCCCCceeeccCcceEEEEEeCC-CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+.....+||-|.||.||.|.|+. .-.||||.++.+ ....++|..|..+|+.++|||+|+++|+|..+. ..|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep----PFYIi 341 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP----PFYII 341 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCC----CeEEE
Confidence 345666899999999999998874 678999998754 345688999999999999999999999998665 56899
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+|||..|+|.||+++... .++....+.+|.||++||+||. .+.+||||+.++|+|+.++..|||+|||+++.|..+
T Consensus 342 TEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred EecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 999999999999988754 5666777899999999999999 999999999999999999999999999999999865
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.+.. ..+..-++.|.|||-+....++.|+|||+|||++||+.| |-.||....- .+ ...+.
T Consensus 419 TYTA-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-----Sq---------VY~LL---- 479 (1157)
T KOG4278|consen 419 TYTA-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQ---------VYGLL---- 479 (1157)
T ss_pred ceec-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-----HH---------HHHHH----
Confidence 4422 223344778999999999999999999999999999999 8888866321 11 11111
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
+.+.+...++.|+..++++|..||+++|.+||+++|+-+.++.+-
T Consensus 480 --EkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 480 --EKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred --hccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 112233346679999999999999999999999999999988653
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=334.06 Aligned_cols=259 Identities=32% Similarity=0.519 Sum_probs=209.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|...+.||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD---- 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC----
Confidence 35777899999999999999742 35669999987665555678899999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~ 844 (1002)
..++||||+++++|.+++.... ..+++..++.++.||+.|++||| +++|+||||||+||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~ 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVG 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEc
Confidence 5689999999999999996532 24788999999999999999999 99999999999999999
Q ss_pred CCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHH
Q 037042 845 DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLK 923 (1002)
Q Consensus 845 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~ 923 (1002)
.++.+||+|||+++...............++..|+|||+..+..++.++|||||||++|||++ |+.||.......
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 233 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---- 233 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----
Confidence 999999999999986654433223344556788999999988899999999999999999999 999986532211
Q ss_pred HHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 924 HWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 924 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.... +..+..... +..++..+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 234 -~~~~--------~~~~~~~~~-------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 234 -VIEC--------ITQGRVLER-------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -HHHH--------HhCCCCCCC-------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111 111111100 112346788999999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=332.03 Aligned_cols=257 Identities=24% Similarity=0.404 Sum_probs=203.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCc----EEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGM----EVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|+..+.||+|+||+||+|.+. +++ .||+|.+.... ......+..|+..+++++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~----- 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA----- 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC-----
Confidence 46888899999999999999864 444 47778775432 23346777888899999999999999987543
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++++||+++|+|.+++......+++..+..++.||+.|++||| +++++||||||+||+++.++.+||+|||+++.
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 346899999999999999876667899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
..............++..|+|||+..++.++.++|||||||++|||++ |+.||....... ..+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~~----------- 225 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDLLE----------- 225 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH-----------
Confidence 654433223344557788999999988899999999999999999998 999986532211 111110
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.+.... .+..+...+.+++.+||..+|++|||+.|+++.|..+..
T Consensus 226 ~~~~~~-------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 226 KGERLA-------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCcCC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 000000 011234567889999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=341.88 Aligned_cols=243 Identities=23% Similarity=0.299 Sum_probs=196.3
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
+.||+|+||.||+++.. +|+.||+|++.+.. ......+.+|+++++.++||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~lv~Ey 76 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD----RLCFVMEY 76 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC----EEEEEEeC
Confidence 46999999999999854 68999999997542 234567788999999999999999999988776 56899999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCcee
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV 867 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 867 (1002)
+++|+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~-- 150 (328)
T cd05593 77 VNGGELFFHLSRER-VFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA-- 150 (328)
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc--
Confidence 99999999887654 4889999999999999999999 89999999999999999999999999999875432211
Q ss_pred eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhh
Q 037042 868 TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947 (1002)
Q Consensus 868 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 947 (1002)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+......
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~~~--------~~~~~~~~---- 213 (328)
T cd05593 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFE--------LILMEDIK---- 213 (328)
T ss_pred ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HHHH--------HhccCCcc----
Confidence 223456899999999998889999999999999999999999999653211 1111 11100000
Q ss_pred hHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHH
Q 037042 948 IQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRL 985 (1002)
Q Consensus 948 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L 985 (1002)
.+......+.+++.+|++++|++|| ++.|+++|-
T Consensus 214 ----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~ 252 (328)
T cd05593 214 ----FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS 252 (328)
T ss_pred ----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence 1122345688999999999999997 899999873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-38 Score=340.61 Aligned_cols=246 Identities=25% Similarity=0.380 Sum_probs=204.8
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCCC
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPH 790 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~ 790 (1002)
-+||+|.||+||-|+.. +...+|||.+.....+..+.+..||...++++|.|||+++|++.+++ +.-|.||-++|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG----f~kIFMEqVPG 656 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG----FFKIFMEQVPG 656 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC----eEEEEeecCCC
Confidence 47999999999999854 56779999998777777788999999999999999999999998877 66688999999
Q ss_pred CChhHhhhccCCcC--CHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEecccccccccCCCcee
Q 037042 791 GSLEKYLYSSNYIL--DIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTREDQFV 867 (1002)
Q Consensus 791 g~L~~~l~~~~~~l--~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~~~~~~~ 867 (1002)
|+|.++++..=+++ .+.+.-.+..||++||.||| ...|||||||-+|||++ -.|.+||+|||-++++..-..
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP-- 731 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP-- 731 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCc--
Confidence 99999998765555 56677788999999999999 89999999999999995 689999999999998765332
Q ss_pred eeccCCCCcccccccccCCC--CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 868 TQTQTPATIGYMALEYGSEG--RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 868 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
....+.||..|||||++..+ +|+.++|||||||++.||.||++||.+...+.. .++.-. .
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---------------AMFkVG---m 793 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---------------AMFKVG---M 793 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---------------hhhhhc---c
Confidence 22456799999999998765 499999999999999999999999987654422 111111 1
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.......|++...+...+|.+|+.++|.+||+++++++.
T Consensus 794 yKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 794 YKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred eecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 112233567788889999999999999999999999865
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=332.20 Aligned_cols=255 Identities=27% Similarity=0.517 Sum_probs=209.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
..+|+..+.||.|+||+||+|+..+++.||+|++..........+..|+.++++++||||+++++++...+ ..++|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE----PVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC----CeEEE
Confidence 45688899999999999999998889999999998766555678899999999999999999999998776 56899
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ..+++.++..++.|+++|++||| +++|+||||||+||+++.++.+||+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 99999999999997643 36899999999999999999999 899999999999999999999999999999876433
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. ......++..|+|||......++.++|||||||++|+|++ |+.||...... +... .+.....
T Consensus 158 ~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-----~~~~--------~~~~~~~ 222 (261)
T cd05148 158 VY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-----EVYD--------QITAGYR 222 (261)
T ss_pred cc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHH--------HHHhCCc
Confidence 21 1223456778999999888889999999999999999998 89998653211 1111 1111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
. ..+..++..+.+++.+||+.+|++|||++++++.|+.+
T Consensus 223 ~-------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 M-------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred C-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0 01123456789999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=340.74 Aligned_cols=240 Identities=24% Similarity=0.273 Sum_probs=193.5
Q ss_pred eeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 714 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
||+|+||.||+|+.. +++.||+|++++.. ......+.+|++++++++||||+++++++...+ ..++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~ 76 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE----KLYLVLAFIN 76 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC----eEEEEEcCCC
Confidence 699999999999865 58899999987532 234466788999999999999999999988766 5689999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeee
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 869 (1002)
+|+|.+++...+ .+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 77 ~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~ 150 (312)
T cd05585 77 GGELFHHLQREG-RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD--KT 150 (312)
T ss_pred CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC--cc
Confidence 999999997654 4889999999999999999999 89999999999999999999999999999975432221 22
Q ss_pred ccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhH
Q 037042 870 TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949 (1002)
Q Consensus 870 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 949 (1002)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+.... +......
T Consensus 151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~~~--------~~~~~~~------ 211 (312)
T cd05585 151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMYRK--------ILQEPLR------ 211 (312)
T ss_pred ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHHHH--------HHcCCCC------
Confidence 345689999999999998999999999999999999999999975321 111111 1111110
Q ss_pred HHhHHHHHHHHHHHHhHccccCCCCCC---CHHHHHHH
Q 037042 950 FVAKEQCMSFVFNMAMECTVESPEKRI---NAKEIVTR 984 (1002)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~~P~~Rp---t~~evl~~ 984 (1002)
.+...+..+.+++.+||+.+|++|| ++.|++.|
T Consensus 212 --~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 212 --FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred --CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 1122446688999999999999997 46788776
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-37 Score=329.95 Aligned_cols=255 Identities=22% Similarity=0.392 Sum_probs=205.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..++||+|+||+||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+ ..++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 79 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE----PIYII 79 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CcEEE
Confidence 35688899999999999999998888899999986543 23577889999999999999999999987666 56899
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ..+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999987643 35788899999999999999999 899999999999999999999999999999876543
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......++..|+|||+.....++.++|||||||++|||++ |+.||....... .... +.... .
T Consensus 157 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~--------~~~~~---~ 222 (261)
T cd05072 157 EYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSA--------LQRGY---R 222 (261)
T ss_pred cee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHH--------HHcCC---C
Confidence 221 1223446778999999888889999999999999999998 999986532111 1111 11000 0
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
. . ....++..+.+++.+|++.+|++||+++++.+.|+++
T Consensus 223 ~-~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 223 M-P------RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred C-C------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0 0 0112345688999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=332.55 Aligned_cols=255 Identities=35% Similarity=0.556 Sum_probs=204.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.+|...+.||+|+||.||+|+.. +++.||||+++..... ..+.+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD--- 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC---
Confidence 45788899999999999999753 3578999998765443 4578999999999999999999999998775
Q ss_pred HHHHHhhccCCCCChhHhhhccC-------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC
Q 037042 779 LFKALALEYMPHGSLEKYLYSSN-------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~-------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~ 845 (1002)
..++||||+++|+|.+++...+ ..+++.++..++.|++.|++||| +++++||||||+||+++.
T Consensus 82 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~ 157 (280)
T cd05049 82 -PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGY 157 (280)
T ss_pred -CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcC
Confidence 6789999999999999997542 24778889999999999999999 899999999999999999
Q ss_pred CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHH
Q 037042 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~ 924 (1002)
++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.....+.
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~----- 232 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE----- 232 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----
Confidence 99999999999986544332222233446788999999999999999999999999999998 999986532211
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.... +..+.... .+..++..+.+++.+||..+|++||++.|+++.|++
T Consensus 233 ~~~~--------~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 233 VIEC--------ITQGRLLQ-------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHH--------HHcCCcCC-------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1111 11111100 011245678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=327.22 Aligned_cols=252 Identities=24% Similarity=0.401 Sum_probs=203.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..+.||+|+||+||+|++.++..||+|.+.... ...+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR----PIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC----CcEEEE
Confidence 4578889999999999999998777789999987543 23467889999999999999999999987665 568999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++|+|.+++......+++.+++.++.||+.|++||| +.+++||||||+||+++.++.+||+|||.++.......
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 999999999999876556899999999999999999999 89999999999999999999999999999886644322
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
.......++..|+|||+..+..++.++|||||||++|||++ |..||....... ... .+.......
T Consensus 156 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-----~~~--------~~~~~~~~~ 221 (256)
T cd05113 156 -TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-----TVE--------KVSQGLRLY 221 (256)
T ss_pred -eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-----HHH--------HHhcCCCCC
Confidence 22233456778999999988889999999999999999999 999986532211 000 111111100
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. +...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 222 ~-------~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 R-------PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred C-------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0 1112467899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=340.13 Aligned_cols=243 Identities=25% Similarity=0.347 Sum_probs=195.2
Q ss_pred ceeeccCcceEEEEEe----CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 712 NLIGRGGFGSVYKARI----QDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+.||+|+||.||+++. .+++.||||++.+.. ......+..|++++++++||||+++++++..++ ..++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~----~~~l 77 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG----KLYL 77 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC----eEEE
Confidence 6799999999999974 358899999987532 223456778999999999999999999988766 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++|+|.+++...+ .+.+..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 78 ILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred EEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 999999999999997654 4778888899999999999999 899999999999999999999999999998754332
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... .++......
T Consensus 154 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~--------~~~~~~~~~ 218 (323)
T cd05584 154 GT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTI--------DKILKGKLN 218 (323)
T ss_pred CC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHH--------HHHHcCCCC
Confidence 21 123356899999999998888999999999999999999999999753211 111 111111111
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRL 985 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L 985 (1002)
. +...+..+.+++.+||+.+|++|| ++.++++|-
T Consensus 219 ~--------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 219 L--------PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred C--------CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence 1 112345688999999999999999 899988864
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=357.25 Aligned_cols=251 Identities=20% Similarity=0.230 Sum_probs=202.6
Q ss_pred CCCCCceeeccCcceEEEEEeC-C-CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-D-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.|...+.||+|+||.||+|... + ++.||+|.+..........+.+|+++++.++|||||++++++...+ ..++|
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~----~~~lv 143 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD----KLLLI 143 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC----EEEEE
Confidence 3888899999999999999743 4 6789999876555555667888999999999999999999998776 56899
Q ss_pred hccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 785 LEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|||+++|+|.++++.. ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.+.
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 9999999999887642 235888899999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
............||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+... .+..+.
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~--------~~~~~~ 287 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQ--------QVLYGK 287 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH--------HHHhCC
Confidence 43322223445699999999999988999999999999999999999999965321 11111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
... .+..++..+.+++.+||..+|++||++.+++++
T Consensus 288 ~~~-------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 288 YDP-------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CCC-------CCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 100 011234678999999999999999999999764
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=345.74 Aligned_cols=202 Identities=22% Similarity=0.311 Sum_probs=173.8
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||+||+|+.. +++.||+|++++.. ......+..|++++++++||||+++++++.... ..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~----~~ 76 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL----NL 76 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----eE
Confidence 46889999999999999999754 68999999997542 223456788999999999999999999998776 67
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++.+.
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 77 YLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred EEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 89999999999999997654 5899999999999999999999 8999999999999999999999999999997653
Q ss_pred CCCce---------------------------------eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhC
Q 037042 862 REDQF---------------------------------VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTG 908 (1002)
Q Consensus 862 ~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg 908 (1002)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence 22110 001234799999999999998999999999999999999999
Q ss_pred CCCCccc
Q 037042 909 KKPTNEI 915 (1002)
Q Consensus 909 ~~P~~~~ 915 (1002)
+.||...
T Consensus 233 ~~Pf~~~ 239 (363)
T cd05628 233 YPPFCSE 239 (363)
T ss_pred CCCCCCC
Confidence 9999753
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=324.75 Aligned_cols=250 Identities=24% Similarity=0.319 Sum_probs=212.5
Q ss_pred cCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.-|...+.||+|.|++|-.|+ .-+|+.||||++.+.. ......+.+|++.|+-++|||||++|++..... -.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT----Kly 93 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT----KLY 93 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc----eEE
Confidence 347788999999999999997 4589999999998753 334567889999999999999999999987665 678
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee-CCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl-~~~~~~kl~DfGla~~~~ 861 (1002)
+|+|.-++|+|.||+.++...+.+.-..+++.||+.|+.|+| +..|||||+||+||.+ .+-|-||++|||++-.+.
T Consensus 94 LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 94 LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 999999999999999998888999999999999999999999 7779999999999987 577999999999998888
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcC-cccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVS-TNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
++... ...+|...|-|||++.+..|+ +++||||+|||+|.|++|++||...-..+. +..|.|-
T Consensus 171 PG~kL---~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-------------LTmImDC 234 (864)
T KOG4717|consen 171 PGKKL---TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-------------LTMIMDC 234 (864)
T ss_pred Ccchh---hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-------------hhhhhcc
Confidence 77654 456899999999999999985 779999999999999999999987533322 3344444
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... .|.....+..++|..|+..||++|.+.+||..+-|
T Consensus 235 KYt--------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 235 KYT--------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred ccc--------CchhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 332 23345677889999999999999999999997644
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=339.81 Aligned_cols=269 Identities=19% Similarity=0.242 Sum_probs=203.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.++||+|+||.||+|+.. ++..||+|++.... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~ 79 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG----EIS 79 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC----EEE
Confidence 367999999999999999999865 68899999887543 234567889999999999999999999998776 668
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++...+ .+++..+..++.|++.|++|||+ ..+|+||||||+||+++.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 9999999999999997654 47888999999999999999993 24799999999999999999999999999976543
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc-----
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI----- 937 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i----- 937 (1002)
.. .....|+..|+|||++.+..++.++|||||||++|||++|+.||....... ................
T Consensus 157 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 157 SM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKE--LELMFGCPVEGDPAESETSPR 230 (333)
T ss_pred hc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhH--HHHHhcCcccCCccccccCcc
Confidence 21 123468899999999988889999999999999999999999997532211 1110000000000000
Q ss_pred ----------ccCccC-ChhhhHH-----------HhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 ----------VDGSLL-SREDIQF-----------VAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ----------~~~~~~-~~~~~~~-----------~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+... ....... ........++.+++.+||+++|++|||+.|+++|-.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 000000 0000000 000012356889999999999999999999998855
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=326.57 Aligned_cols=255 Identities=26% Similarity=0.443 Sum_probs=205.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||.||+|...+++.||+|.++... ...+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 79 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE----PIYIV 79 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCC----Ceeee
Confidence 35688889999999999999998778899999987543 23567889999999999999999999987766 56899
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++++|.+++.... ..+++..+..++.|++.|+.||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 99999999999997644 35899999999999999999999 899999999999999999999999999999876532
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. ........+..|+|||+..+..++.++|||||||++|||++ |+.||....... ... .+ +...
T Consensus 157 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~--------~~-~~~~ 221 (261)
T cd05068 157 IY-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-----VLQ--------QV-DQGY 221 (261)
T ss_pred cc-cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHH--------HH-HcCC
Confidence 21 11122233567999999988889999999999999999999 999986532110 000 00 0000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
.. ..+..++..+.+++.+|++.+|++||++.++++.|+.+
T Consensus 222 ~~------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 222 RM------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CC------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 00 01122456789999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=331.03 Aligned_cols=257 Identities=25% Similarity=0.441 Sum_probs=202.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
..++|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++..+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 3567999999999999999999743 35679999986432 234456889999999999999999999987666
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC---------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
..++||||+++|+|.+++...+ ...++..+..++.|+++|++||| +.+++||||||+||++++++
T Consensus 83 ---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~ 156 (277)
T cd05062 83 ---PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF 156 (277)
T ss_pred ---CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCC
Confidence 5689999999999999987532 13567888999999999999999 89999999999999999999
Q ss_pred cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHH
Q 037042 848 VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~ 926 (1002)
.+||+|||+++...............++..|+|||++.++.++.++|||||||++|||++ |..||...... ...
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-----~~~ 231 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-----QVL 231 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHH
Confidence 999999999986654333222223345778999999988889999999999999999999 78888653221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.. +....... .+..++..+.+++.+||+.+|++|||+.|++++|++
T Consensus 232 ~~--------~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 232 RF--------VMEGGLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HH--------HHcCCcCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11 01111000 012245678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=341.39 Aligned_cols=266 Identities=18% Similarity=0.160 Sum_probs=198.6
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
..+|+..+.||+|+||.||+|.. .+++.||+|... ...+.+|++++++++||||+++++++.... ..++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNK----FTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC----eeEE
Confidence 35799999999999999999985 468999999743 234678999999999999999999998766 6689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+|++. ++|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus 161 v~e~~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred EEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 999995 68988886654 4889999999999999999999 899999999999999999999999999999754322
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc------ccHHHHHHHHHh------
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG------MTLKHWVNDWLL------ 931 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~------~~~~~~~~~~~~------ 931 (1002)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+...+.....
T Consensus 236 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 236 NA-NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred cc-cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 11 12234579999999999988899999999999999999999998875432110 111111110000
Q ss_pred ----hhhhhcc----cCccCChhhh-HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 ----ISIMKIV----DGSLLSREDI-QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 ----~~~~~i~----~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.....+. .......... ........+..+.+++.+|+++||++|||++|+++|=+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 0000000 0000000000 00011234567899999999999999999999998755
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=349.88 Aligned_cols=254 Identities=20% Similarity=0.281 Sum_probs=199.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||+||+|+.. +|+.||||++.+.. ......+.+|+++++.++||||+++++++..++ ..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~----~~ 76 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN----YL 76 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC----eE
Confidence 36889999999999999999864 68999999997542 234456788999999999999999999998776 67
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 77 ~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 77 YLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred EEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 89999999999999997654 4899999999999999999999 8999999999999999999999999999987653
Q ss_pred CCCcee------------------------------------eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHH
Q 037042 862 REDQFV------------------------------------TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMET 905 (1002)
Q Consensus 862 ~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el 905 (1002)
...... .....+||+.|+|||++....++.++|||||||++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 221100 00124689999999999888999999999999999999
Q ss_pred HhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC---HHHHH
Q 037042 906 FTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN---AKEIV 982 (1002)
Q Consensus 906 ltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt---~~evl 982 (1002)
++|+.||...... +.... +.... ....... ....+..+.+++.+|+. +|.+|++ +.|++
T Consensus 233 ~~G~~Pf~~~~~~-----~~~~~-----i~~~~-~~~~~~~------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll 294 (364)
T cd05599 233 LVGYPPFCSDNPQ-----ETYRK-----IINWK-ETLQFPD------EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIK 294 (364)
T ss_pred hcCCCCCCCCCHH-----HHHHH-----HHcCC-CccCCCC------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHh
Confidence 9999999753221 10000 00000 0000000 01124567889999996 8999998 99999
Q ss_pred HHH
Q 037042 983 TRL 985 (1002)
Q Consensus 983 ~~L 985 (1002)
+|-
T Consensus 295 ~h~ 297 (364)
T cd05599 295 SHP 297 (364)
T ss_pred cCC
Confidence 873
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=349.74 Aligned_cols=252 Identities=19% Similarity=0.259 Sum_probs=196.2
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.|+..+.||+|+||+||+|+. .+++.||||++.+.. ......+.+|++++++++||||+++++++...+ ..+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~----~~~ 77 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD----NLY 77 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC----EEE
Confidence 588889999999999999975 468899999997542 234567889999999999999999999998776 678
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 78 lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~ 153 (381)
T cd05626 78 FVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRW 153 (381)
T ss_pred EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccc
Confidence 9999999999999997655 4788888999999999999999 89999999999999999999999999999864321
Q ss_pred CCce---------------------------------------------eeeccCCCCcccccccccCCCCcCcccchHH
Q 037042 863 EDQF---------------------------------------------VTQTQTPATIGYMALEYGSEGRVSTNGDVYN 897 (1002)
Q Consensus 863 ~~~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS 897 (1002)
.... .......||..|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (381)
T cd05626 154 THNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWS 233 (381)
T ss_pred ccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceee
Confidence 1000 0012346999999999998888999999999
Q ss_pred HHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc--CccCChhhhHHHhHHHHHHHHHHHHhH--ccccCCC
Q 037042 898 FGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD--GSLLSREDIQFVAKEQCMSFVFNMAME--CTVESPE 973 (1002)
Q Consensus 898 lGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~~P~ 973 (1002)
|||++|||++|+.||......... ..+.+ .....+. ......++.+++.+ |+..+|.
T Consensus 234 lG~il~elltG~~Pf~~~~~~~~~-------------~~i~~~~~~~~~~~------~~~~s~~~~dli~~ll~~~~~~~ 294 (381)
T cd05626 234 VGVILFEMLVGQPPFLAPTPTETQ-------------LKVINWENTLHIPP------QVKLSPEAVDLITKLCCSAEERL 294 (381)
T ss_pred hhhHHHHHHhCCCCCcCCCHHHHH-------------HHHHccccccCCCC------CCCCCHHHHHHHHHHccCccccc
Confidence 999999999999999764321110 01110 0000000 01123556778877 5555666
Q ss_pred CCCCHHHHHHHH
Q 037042 974 KRINAKEIVTRL 985 (1002)
Q Consensus 974 ~Rpt~~evl~~L 985 (1002)
.||++.|+++|-
T Consensus 295 ~R~~~~~~l~hp 306 (381)
T cd05626 295 GRNGADDIKAHP 306 (381)
T ss_pred CCCCHHHHhcCc
Confidence 799999999984
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=325.54 Aligned_cols=249 Identities=26% Similarity=0.423 Sum_probs=197.5
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
+.||+|+||+||+|+.. +++.||+|.+.... ......+.+|++++++++||||+++++++.... ..++||||++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~ 76 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ----PIYIVMELVQ 76 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC----CeEEEEeecc
Confidence 36899999999999864 78999999876543 334567889999999999999999999997766 5689999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeee
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 869 (1002)
+++|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++............
T Consensus 77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 99999999766556899999999999999999999 899999999999999999999999999998765432211111
Q ss_pred ccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhh
Q 037042 870 TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDI 948 (1002)
Q Consensus 870 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 948 (1002)
.....+..|+|||.+.++.++.++|||||||++|||++ |..||....... ... ........
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~------------~~~~~~~~---- 215 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TRE------------AIEQGVRL---- 215 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHH------------HHHcCCCC----
Confidence 12233567999999988889999999999999999998 888886532210 000 00000000
Q ss_pred HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 949 QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 949 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
..+..++..+.+++.+|++.+|++|||+.|+++.|++
T Consensus 216 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 216 --PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred --CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 0112345678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=334.34 Aligned_cols=269 Identities=22% Similarity=0.290 Sum_probs=196.5
Q ss_pred CCCCCceeeccCcceEEEEEe-C-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhc---cCCCcceeeeEEecCch-hh
Q 037042 707 GFSENNLIGRGGFGSVYKARI-Q-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSI---RHRNIIKIISCCSIGDF-KA 778 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~-~~ 778 (1002)
+|++.+.||+|+||+||+|+. . +++.||+|+++... ......+.+|+.+++.+ +||||+++++++..... ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 688899999999999999985 3 47889999987432 22334566777777766 69999999998864221 12
Q ss_pred HHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
...++||||++ ++|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence 24579999996 59999887643 35889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH---hhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL---LISI 934 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~---~~~~ 934 (1002)
+...... ......||..|+|||++.+..++.++|||||||++|||++|++||......+ .+...+.... ....
T Consensus 158 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 158 RIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDW 233 (290)
T ss_pred EeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhc
Confidence 7654332 2234568999999999988889999999999999999999999997643211 1111111000 0000
Q ss_pred h---hcccCccC--ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 935 M---KIVDGSLL--SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 935 ~---~i~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. ........ ....... .....+..+.+++.+|++.+|++|||+.|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhhhcccchhccCCCCCCHHH-HccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0 00000000 0000000 111245678899999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=330.61 Aligned_cols=255 Identities=27% Similarity=0.476 Sum_probs=202.8
Q ss_pred cCCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|+..+.||+|+||+||+|+. ..+..||+|.+.... ......+.+|++++++++||||+++++++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 80 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ---- 80 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC----
Confidence 4577889999999999999974 246789999987543 334467889999999999999999999988766
Q ss_pred HHHHhhccCCCCChhHhhhccC----------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee
Q 037042 780 FKALALEYMPHGSLEKYLYSSN----------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL 843 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~----------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl 843 (1002)
..++||||+++|+|.+++.... ..+++.+...++.|++.|++||| +++|+||||||+||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili 157 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILI 157 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEE
Confidence 5689999999999999985321 24778889999999999999999 8999999999999999
Q ss_pred CCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccH
Q 037042 844 GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTL 922 (1002)
Q Consensus 844 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~ 922 (1002)
++++.+||+|||+++...............++..|+|||+..+..++.++|||||||++|||++ |..||...... ..
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~~ 235 (283)
T cd05090 158 GEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--EV 235 (283)
T ss_pred cCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HH
Confidence 9999999999999987654433223344456778999999988889999999999999999998 99898653211 11
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
. +.++...... .+..++..+.+++.+||+.+|++||++.++.++|.+
T Consensus 236 ~------------~~~~~~~~~~------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 I------------EMVRKRQLLP------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred H------------HHHHcCCcCC------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 1111100000 112345678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=330.51 Aligned_cols=267 Identities=27% Similarity=0.413 Sum_probs=206.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-----CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-----DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.+|++.+.||+|+||+||+|+.+ +++.||+|++........+.+.+|++++++++||||+++++++...+.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~--~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR--N 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC--c
Confidence 46888899999999999999742 5789999998876656667889999999999999999999987543321 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||+++..
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 57999999999999999876656899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeee-ccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh-------
Q 037042 861 TREDQFVTQ-TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI------- 932 (1002)
Q Consensus 861 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~------- 932 (1002)
......... ....++..|+|||+..+..++.++|||||||++|||++|..|+...... +.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 232 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE------FMRMMGNDKQGQMIV 232 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh------hhhhcccccccccch
Confidence 543322111 1223445699999998888999999999999999999998776442111 10000000
Q ss_pred -hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 933 -SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 933 -~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.+.+....... ...+..++..+.+++.+||..+|++|||+.|+++.|++++
T Consensus 233 ~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 233 YHLIELLKNNGR------LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHHHHHHhcCCc------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 00011110000 0011234567999999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=330.39 Aligned_cols=269 Identities=25% Similarity=0.415 Sum_probs=203.7
Q ss_pred CCCCceeeccCcceEEEEEe-----CCCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 708 FSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
|+..+.||+|+||+||++.. .+++.||+|+++.... .....+.+|++++++++||||+++++++...... ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK--GL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc--eE
Confidence 37889999999999988653 3578899999876532 3456788999999999999999999988654321 45
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++... .+++.++..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 7999999999999999764 3899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH-HHHhhhhhhccc
Q 037042 862 REDQFVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN-DWLLISIMKIVD 939 (1002)
Q Consensus 862 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~-~~~~~~~~~i~~ 939 (1002)
....... .....++..|+|||...+..++.++|||||||++|||++|+.||............+.. ........+..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 4322111 12234566799999988888999999999999999999999998654321110000000 000000111111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.... ...+..++..+.+++.+||+.+|++|||++++++.|+++.
T Consensus 239 ~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 239 RGMR------LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cCCC------CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1100 0012235678999999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=326.75 Aligned_cols=251 Identities=27% Similarity=0.423 Sum_probs=201.7
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.+|+..+.||+|+||.||+|++.++..+|+|++.+... ....+.+|++++++++||||+++++++...+ ..++||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~ 78 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR----PIFIVT 78 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC----ceEEEE
Confidence 35788899999999999999987778899999865432 3456788999999999999999999987666 568999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++++|.+++...+..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 999999999999876557899999999999999999999 89999999999999999999999999999976543221
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
.......++..|+|||...+..++.++|||||||++|||++ |+.||....... . .. .+......
T Consensus 156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~---~~-----~~~~~~~~---- 220 (256)
T cd05059 156 -TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--V---VE-----SVSAGYRL---- 220 (256)
T ss_pred -cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--H---HH-----HHHcCCcC----
Confidence 11122334567999999988899999999999999999999 899986532211 0 00 01100000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..+..++..+.+++.+||+.+|++|||+.|+++.|
T Consensus 221 ------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 221 ------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 01112456799999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=336.38 Aligned_cols=256 Identities=24% Similarity=0.315 Sum_probs=214.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch---hHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR---AFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 779 (1002)
.+.|+..+.||+|.||.||+++.+ +|+.+|+|++.+.... ....+.+|+.+|+++. |||||.+++++....
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~---- 109 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD---- 109 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC----
Confidence 456888899999999999999855 5999999999865432 3468999999999998 999999999999887
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC----CCcEEEeccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD----NMVAHLSDFG 855 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~----~~~~kl~DfG 855 (1002)
..++|||++.||.|.+.+... . +++..+..++.||+.|++||| +.+|+|||+||+|+|+.. ++.+|++|||
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 778999999999999999876 3 889999999999999999999 899999999999999963 3579999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
+|....... .....+||+.|+|||++....|+..+||||+||++|.|++|.+||........ ..
T Consensus 185 la~~~~~~~---~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~-------------~~ 248 (382)
T KOG0032|consen 185 LAKFIKPGE---RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI-------------FL 248 (382)
T ss_pred CceEccCCc---eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-------------HH
Confidence 999887632 34667899999999999999999999999999999999999999987543322 11
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
++..+...... ...+..+..+.+++.+|+..||.+|+|+.++++|-| |+.
T Consensus 249 ~i~~~~~~f~~----~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW-i~~ 298 (382)
T KOG0032|consen 249 AILRGDFDFTS----EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW-IKS 298 (382)
T ss_pred HHHcCCCCCCC----CCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc-ccC
Confidence 22222221111 122345778999999999999999999999999977 443
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=338.66 Aligned_cols=246 Identities=22% Similarity=0.310 Sum_probs=194.7
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHH---HhccCCCcceeeeEEecCchhhHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVM---KSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
|++.+.||+|+||.||+|+.. +++.||||++++.. ....+.+..|++++ +.++||||+++++++...+ .
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~----~ 76 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED----H 76 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC----E
Confidence 567889999999999999854 68999999997542 22345566676665 4667999999999998776 6
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|..++... .+++..+..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 77 ~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05589 77 VCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG 151 (324)
T ss_pred EEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence 68999999999999888653 4899999999999999999999 899999999999999999999999999998754
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......|++.|||||++.+..++.++|||||||++|||++|+.||...... +... .+...
T Consensus 152 ~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~--------~i~~~ 216 (324)
T cd05589 152 MGFGD--RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFD--------SIVND 216 (324)
T ss_pred CCCCC--cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHhC
Confidence 32221 123456899999999999889999999999999999999999999753221 1111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRL 985 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L 985 (1002)
... .+...+..+.+++.+||+.+|.+|| ++.++++|-
T Consensus 217 ~~~--------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 217 EVR--------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred CCC--------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 111 1112346678999999999999999 577777763
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=338.14 Aligned_cols=242 Identities=23% Similarity=0.312 Sum_probs=193.8
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|+.. +++.||||++.+.. ......+..|.++++.. +||||+++++++...+ ..++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~----~~~iv~E 76 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD----RLFFVME 76 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC----EEEEEEc
Confidence 46999999999999865 68899999987542 23445667788888876 6999999999998776 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 y~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~- 151 (320)
T cd05590 77 FVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK- 151 (320)
T ss_pred CCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-
Confidence 999999999887654 4889999999999999999999 89999999999999999999999999999875432221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+.......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~--------~i~~~~~~~-- 215 (320)
T cd05590 152 -TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----DLFE--------AILNDEVVY-- 215 (320)
T ss_pred -cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHH--------HHhcCCCCC--
Confidence 123456899999999999889999999999999999999999999753221 1111 111111110
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCH------HHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINA------KEIVTR 984 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~------~evl~~ 984 (1002)
+...+..+.+++.+|++.||++||++ +++++|
T Consensus 216 ------~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 216 ------PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred ------CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 11234568899999999999999998 777766
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=326.04 Aligned_cols=258 Identities=22% Similarity=0.294 Sum_probs=206.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||.||+|+.. +++.||||.+... .......+.+|++++++++||||+++++++...+ ..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~ 77 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN----EL 77 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC----eE
Confidence 46889999999999999999854 7899999987642 2334567888999999999999999999988765 56
Q ss_pred HHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
++|+||+++|+|.+++.. ....++...+..++.|+++|++||| +++|+||||||+||+++.++.++|+|||++.
T Consensus 78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccce
Confidence 799999999999988753 2235788899999999999999999 8999999999999999999999999999988
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......++..|+|||...+..++.++||||+||++|||++|+.||...... ...+... +....
T Consensus 155 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~~~-----~~~~~ 224 (267)
T cd08228 155 FFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLCQK-----IEQCD 224 (267)
T ss_pred eccchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHHHH-----HhcCC
Confidence 7653321 112346788999999988888999999999999999999999998653221 1111111 11111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.+.. .....+..+.+++.+||..+|++||++.++++.+++++
T Consensus 225 ~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 225 YPPL---------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCCC---------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0000 11234567899999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=345.68 Aligned_cols=253 Identities=22% Similarity=0.294 Sum_probs=202.0
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||+||+|+.. +|+.||+|++++.. ....+.+..|+.+++.++||||+++++++...+ ..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~----~~ 76 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD----NL 76 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC----eE
Confidence 36888999999999999999854 68999999997542 234567888999999999999999999987766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 77 YLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred EEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 8999999999999999887556899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccC------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 862 REDQFVTQTQTPATIGYMALEYGS------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
..... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ....
T Consensus 154 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~-------- 219 (330)
T cd05601 154 ANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----KTYN-------- 219 (330)
T ss_pred CCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----HHHH--------
Confidence 43322 223456899999999876 456789999999999999999999999653221 1111
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
++........ .......+..+.+++.+|+. +|.+||++.++++|
T Consensus 220 ~i~~~~~~~~----~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 220 NIMNFQRFLK----FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHcCCCccC----CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 1111000000 00011234568899999997 99999999999987
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=355.32 Aligned_cols=258 Identities=22% Similarity=0.269 Sum_probs=204.2
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh---
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--- 777 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 777 (1002)
...+|++.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+.++..++|+||+++++.+...+..
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 346899999999999999999974 479999999987542 33456678899999999999999998776543311
Q ss_pred -hHHHHHhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 778 -ALFKALALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 778 -~~~~~lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
....++||||+++|+|.+++... ...+++..+..++.|++.||.|+| +++|+||||||+|||++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEe
Confidence 11246899999999999998653 235888999999999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+..
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~~----- 256 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMHK----- 256 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHH-----
Confidence 999987654322222344578999999999999999999999999999999999999996532 1121111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+..+.... .+..++..+.+++.+||+.+|++||++.++++|
T Consensus 257 ---~~~~~~~~-------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 ---TLAGRYDP-------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ---HhcCCCCC-------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 11111000 112345678999999999999999999999986
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=349.21 Aligned_cols=254 Identities=20% Similarity=0.252 Sum_probs=197.1
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||+||+|+. .+++.||||++.+.. ....+.+.+|++++++++||||+++++++...+ +.
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~----~~ 76 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ----YL 76 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC----ee
Confidence 3688899999999999999975 478999999986532 234467888999999999999999999998776 67
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 77 YLIMEFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 89999999999999997654 4888889999999999999999 9999999999999999999999999999996432
Q ss_pred CCCcee---------------------------------------------eeccCCCCcccccccccCCCCcCcccchH
Q 037042 862 REDQFV---------------------------------------------TQTQTPATIGYMALEYGSEGRVSTNGDVY 896 (1002)
Q Consensus 862 ~~~~~~---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvw 896 (1002)
...... ......||+.|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 232 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence 210000 00124689999999999888999999999
Q ss_pred HHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCC-
Q 037042 897 NFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKR- 975 (1002)
Q Consensus 897 SlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R- 975 (1002)
||||++|||++|+.||....... .... +.... .....+. .......+.+++.+|+. +|.+|
T Consensus 233 SlGvil~elltG~~Pf~~~~~~~-----~~~~-----i~~~~-~~~~~p~------~~~~s~~~~dli~~lL~-~~~~r~ 294 (377)
T cd05629 233 SLGAIMFECLIGWPPFCSENSHE-----TYRK-----IINWR-ETLYFPD------DIHLSVEAEDLIRRLIT-NAENRL 294 (377)
T ss_pred ecchhhhhhhcCCCCCCCCCHHH-----HHHH-----HHccC-CccCCCC------CCCCCHHHHHHHHHHhc-CHhhcC
Confidence 99999999999999996532211 0000 00000 0000000 01134568899999997 66665
Q ss_pred --CCHHHHHHHH
Q 037042 976 --INAKEIVTRL 985 (1002)
Q Consensus 976 --pt~~evl~~L 985 (1002)
+++.|+++|-
T Consensus 295 ~r~~~~~~l~hp 306 (377)
T cd05629 295 GRGGAHEIKSHP 306 (377)
T ss_pred CCCCHHHHhcCC
Confidence 6999999984
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=345.96 Aligned_cols=255 Identities=24% Similarity=0.330 Sum_probs=204.0
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+|+.. +|+.||||++++.. ......+..|+++++.++||||+++++++..++ ..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~ 76 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE----HL 76 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC----eE
Confidence 36889999999999999999865 68999999997542 234567888999999999999999999988776 67
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 77 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 77 YLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred EEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 8999999999999999876 35889999999999999999999 8999999999999999999999999999998665
Q ss_pred CCC---------------------------ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 862 RED---------------------------QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 862 ~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
... .........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 432 00112345689999999999999999999999999999999999999976
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-HHHHHHHHH
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-AKEIVTRLL 986 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-~~evl~~L~ 986 (1002)
..... .+ .. +.... .....+. ....+..+.+++.+|+. +|.+||+ ++|+++|-.
T Consensus 233 ~~~~~----~~-~~-----i~~~~-~~~~~p~------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 233 DTLQE----TY-NK-----IINWK-ESLRFPP------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred CCHHH----HH-HH-----HhccC-CcccCCC------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 43111 00 00 11000 0000000 01135678899999997 9999999 999999843
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=340.54 Aligned_cols=243 Identities=22% Similarity=0.278 Sum_probs=195.0
Q ss_pred ceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 712 NLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
+.||+|+||.||+|+. .+|+.||+|++.+.. ......+..|+++++.++||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~----~~~lv~E~ 76 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----RLCFVMEY 76 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC----EEEEEEeC
Confidence 4699999999999985 478999999997542 233456778999999999999999999988776 56899999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
+++|+|.+++...+ .+++..+..++.||+.||+||| + .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~- 151 (325)
T cd05594 77 ANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA- 151 (325)
T ss_pred CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-
Confidence 99999999887654 4889999999999999999999 6 7999999999999999999999999999875432221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.....+ .... .+......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-----~~~~--------~i~~~~~~--- 214 (325)
T cd05594 152 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFE--------LILMEEIR--- 214 (325)
T ss_pred -ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-----HHHH--------HHhcCCCC---
Confidence 123356899999999998889999999999999999999999999653211 1111 01111100
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRL 985 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L 985 (1002)
.+......+.+++.+|++.||++|+ ++.++++|-
T Consensus 215 -----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 215 -----FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred -----CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence 0112345688999999999999997 899999873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=327.83 Aligned_cols=260 Identities=26% Similarity=0.417 Sum_probs=206.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCc----EEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGM----EVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
..+|+..++||+|+||+||+|++. +|+ .||+|++.... ......+..|+.+++.+.||||+++++++....
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTST--- 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCC---
Confidence 356888899999999999999853 444 48999987543 334567888999999999999999999986543
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++++||+++|+|.+++......+++..+..++.||++||+||| +++|+||||||+||++++++.+||+|||+++
T Consensus 83 --~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 83 --VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred --cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCcee
Confidence 46899999999999999876666899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
...............++..|+|||...+..++.++|||||||++|||++ |..||...... ....++. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~--------~- 226 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDLLE--------K- 226 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH--------C-
Confidence 7654333222233345678999999988889999999999999999998 89998653211 1111111 0
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
..... .+..++..+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 227 --~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 227 --GERLP-------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred --CCcCC-------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 00000 01124567889999999999999999999999998886543
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=325.71 Aligned_cols=254 Identities=27% Similarity=0.405 Sum_probs=203.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+|+..+.||+|+||.||+|.+. .++.||+|++.... ...+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC----CcEEE
Confidence 35778899999999999999854 58899999987543 34567889999999999999999999987766 56799
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++++|.+++.... ..+++..++.++.|+++|++||| +.+++||||||+||++++++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999999999987643 35889999999999999999999 899999999999999999999999999999876543
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......++..|+|||+..+..++.++|||||||++|||++ |..||..... .+.... +......
T Consensus 158 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~-----~~~~~~~-- 224 (263)
T cd05052 158 TYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYEL-----LEKGYRM-- 224 (263)
T ss_pred eee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH-----HHCCCCC--
Confidence 221 1122334667999999988889999999999999999998 8999865321 111111 0000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
..+..++..+.+++.+||..+|++||++.++++.|+.+
T Consensus 225 --------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 --------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred --------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 01123456799999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=340.00 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=195.8
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++|+||+++++++...+ ..++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~l 149 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG----EIQV 149 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC----eEEE
Confidence 34667789999999999999854 68999999986543 334567889999999999999999999997766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++|+|.+.. ...+..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+...
T Consensus 150 v~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 150 LLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 99999999986543 2456777889999999999999 899999999999999999999999999999876432
Q ss_pred CceeeeccCCCCcccccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSE-----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
.. ......||..|+|||++.. ...+.++|||||||++|||++|+.||...... .|..... .+.
T Consensus 222 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-----~~~~~~~-----~~~ 289 (353)
T PLN00034 222 MD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-----DWASLMC-----AIC 289 (353)
T ss_pred cc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-----cHHHHHH-----HHh
Confidence 21 1234578999999998643 23467899999999999999999999732111 1111100 000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..... ..+..+...+.+++.+||+.+|++||++.|+++|-+-.+.
T Consensus 290 ~~~~~-------~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 290 MSQPP-------EAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred ccCCC-------CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 00000 0112345678999999999999999999999999654443
|
|
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=328.52 Aligned_cols=255 Identities=31% Similarity=0.499 Sum_probs=204.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|+..++||+|+||.||+|... ++..||+|.+..........+.+|++++++++|+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR---- 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC----
Confidence 35777899999999999999632 36689999987666666778999999999999999999999988766
Q ss_pred HHHHhhccCCCCChhHhhhccC--------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN--------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~ 845 (1002)
..++||||+++|+|.+++...+ ..+++..++.++.|++.|++||| +.+|+||||||+||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcC
Confidence 5689999999999999987643 24788999999999999999999 899999999999999999
Q ss_pred CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHH
Q 037042 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~ 924 (1002)
++.+||+|||+++.+.............+++.|+|||+..+..++.++|||||||++|||++ |..||........
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---- 233 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA---- 233 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH----
Confidence 99999999999976654332222233445778999999988899999999999999999998 8999865322110
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
...+..+.... .+..++..+.+++.+||..+|++||++.|+++.|++
T Consensus 234 ---------~~~~~~~~~~~-------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 ---------IECITQGRELE-------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ---------HHHHHcCccCC-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 01111111000 112245668899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=325.04 Aligned_cols=258 Identities=27% Similarity=0.464 Sum_probs=202.0
Q ss_pred CCCCceeeccCcceEEEEEeC-C---CcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-D---GMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KAL 779 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~ 779 (1002)
|...+.||+|+||+||+|... + +..||+|++.... ......+.+|++.++.++||||+++++++...+. ...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567789999999999999754 2 3679999987542 2345678899999999999999999998866442 112
Q ss_pred HHHHhhccCCCCChhHhhhcc-----CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 780 FKALALEYMPHGSLEKYLYSS-----NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
..++|+||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 357999999999999888543 125888999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
|+++.+.............++..|+|||+.....++.++|||||||++|||++ |..||...... ++...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----~~~~~----- 227 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-----EIYDY----- 227 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH-----
Confidence 99987654433222223345678999999888889999999999999999999 88888653221 11111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
+.++.... .+..++..+.+++.+||+.+|++||++.|++++|+++
T Consensus 228 ---~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 228 ---LRHGNRLK-------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---HHcCCCCC-------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111100 1123456799999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=339.15 Aligned_cols=253 Identities=21% Similarity=0.269 Sum_probs=198.2
Q ss_pred CCCCCceeeccCcceEEEEEe----CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 707 GFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
+|++.+.||+|+||+||+++. .+++.||+|++.+.. ....+.+..|+.+++++ +||+|+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-- 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA-- 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--
Confidence 478889999999999999974 358899999987532 22345678899999999 5899999999887766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||++
T Consensus 79 --~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~ 152 (332)
T cd05614 79 --KLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLS 152 (332)
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCC
Confidence 5679999999999999987654 4889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
+........ ......||..|||||++.+. .++.++|||||||++|||++|+.||........ ....... +..
T Consensus 153 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~-----~~~ 225 (332)
T cd05614 153 KEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRR-----ILK 225 (332)
T ss_pred ccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHH-----Hhc
Confidence 865433221 12345689999999998765 478999999999999999999999965322111 1111110 100
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRL 985 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L 985 (1002)
.+.. .+...+..+.+++.+||+.||++|| +++++++|-
T Consensus 226 -~~~~----------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 226 -CDPP----------FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred -CCCC----------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 0000 0112345688999999999999999 788998874
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=337.21 Aligned_cols=243 Identities=23% Similarity=0.285 Sum_probs=194.4
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
++||+|+||.||+|+.. +++.||||++.+.. ......+..|.++++.+ +||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~----~~~lv~E 76 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD----RLFFVME 76 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC----eEEEEEe
Confidence 46999999999999865 58899999987542 23345567788888876 7999999999998776 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~- 151 (321)
T cd05591 77 YVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV- 151 (321)
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-
Confidence 999999999987654 4888999999999999999999 89999999999999999999999999999875432221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||..|+|||++.+..++.++||||+||++|||++|+.||...... .... .+.......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-----~~~~--------~i~~~~~~~-- 215 (321)
T cd05591 152 -TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-----DLFE--------SILHDDVLY-- 215 (321)
T ss_pred -cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-----HHHH--------HHHcCCCCC--
Confidence 123456899999999998889999999999999999999999999753221 1111 111111110
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCC-------CHHHHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRI-------NAKEIVTRL 985 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-------t~~evl~~L 985 (1002)
+...+..+.+++.+|++.+|++|| ++.++++|-
T Consensus 216 ------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 216 ------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred ------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence 111345688999999999999999 888888773
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=336.70 Aligned_cols=247 Identities=21% Similarity=0.261 Sum_probs=195.4
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCC-CcceeeeEEecCchhhHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHR-NIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~ 781 (1002)
+|+..+.||+|+||.||+|+.. +++.||||++.+.. ....+.+..|+++++.++|+ +|+++++++...+ ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~ 76 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD----RL 76 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC----EE
Confidence 4788899999999999999865 57899999997542 23446677899999999764 6888888887766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++...
T Consensus 77 ~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05587 77 YFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENI 152 (324)
T ss_pred EEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence 89999999999999987654 4788999999999999999999 8999999999999999999999999999987533
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.... ......||..|+|||++.+..++.++||||+||++|||++|+.||....... .. ..+....
T Consensus 153 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-----~~--------~~i~~~~ 217 (324)
T cd05587 153 FGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-----LF--------QSIMEHN 217 (324)
T ss_pred CCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----HH--------HHHHcCC
Confidence 2221 1234568999999999999899999999999999999999999997532211 00 1111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~ 984 (1002)
... +......+.+++.+|+..+|.+|++. .++.+|
T Consensus 218 ~~~--------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 218 VSY--------PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CCC--------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 110 11234567899999999999999986 677665
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=332.09 Aligned_cols=262 Identities=27% Similarity=0.418 Sum_probs=200.3
Q ss_pred cCCCCCceeeccCcceEEEEEeCC---------------CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeee
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD---------------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIIS 769 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~ 769 (1002)
.+|++.+.||+|+||.||+++..+ ...||+|+++... ......+.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468899999999999999987532 2358999987643 334567889999999999999999999
Q ss_pred EEecCchhhHHHHHhhccCCCCChhHhhhccC-----------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCC
Q 037042 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSN-----------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKP 838 (1002)
Q Consensus 770 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp 838 (1002)
++.... ..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||
T Consensus 85 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp 157 (295)
T cd05097 85 VCVSDD----PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLAT 157 (295)
T ss_pred EEcCCC----ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccCh
Confidence 997766 6689999999999999986532 13678889999999999999999 89999999999
Q ss_pred CCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh--CCCCCcccc
Q 037042 839 SNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT--GKKPTNEIF 916 (1002)
Q Consensus 839 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~~P~~~~~ 916 (1002)
+||++++++.+||+|||++................++..|+|||+..++.++.++|||||||++|||++ |..||....
T Consensus 158 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 158 RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred hhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 999999999999999999986644332222233445778999999888889999999999999999998 666776532
Q ss_pred cccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 917 NEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.+. ................ ... .+..++..+.+++.+||..+|++||++.+|++.|++
T Consensus 238 ~~~--~~~~~~~~~~~~~~~~-----~~~------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 238 DEQ--VIENTGEFFRNQGRQI-----YLS------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred hHH--HHHHHHHhhhhccccc-----cCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 211 1110000000000000 000 011234679999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=328.12 Aligned_cols=264 Identities=25% Similarity=0.420 Sum_probs=205.6
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
..++|++.+.||+|+||.||+|... .+..||+|.+..... .....+.+|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ- 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 3567999999999999999999643 255899999865432 23456788999999999999999999987766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC---------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
..++||||+++|+|.+++...+ ...++..+..++.|++.|++||| +++|+||||||+||++++++
T Consensus 83 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~ 156 (288)
T cd05061 83 ---PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDF 156 (288)
T ss_pred ---CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCC
Confidence 5689999999999999997532 23456778899999999999999 89999999999999999999
Q ss_pred cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHH
Q 037042 848 VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~ 926 (1002)
.+||+|||+++...............++..|+|||...++.++.++|||||||++|||++ |..||.....+ ++.
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~~ 231 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QVL 231 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHH
Confidence 999999999986544332222223345678999999988889999999999999999999 78888653221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
. .+.++.... .+..++..+.+++.+|++.+|++|||+.|+++.+++.......
T Consensus 232 ~--------~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~ 284 (288)
T cd05061 232 K--------FVMDGGYLD-------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 284 (288)
T ss_pred H--------HHHcCCCCC-------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence 1 111111110 0122346799999999999999999999999999986544443
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=334.95 Aligned_cols=242 Identities=21% Similarity=0.282 Sum_probs=190.1
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|+.. +++.||+|++++.. ....+....|.+++... +||||+++++++..++ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~----~~~lv~e 76 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE----HLFFVME 76 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC----EEEEEEc
Confidence 46999999999999865 58899999997542 22334556677777654 8999999999988766 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~- 151 (316)
T cd05592 77 YLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG- 151 (316)
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC-
Confidence 999999999987654 4888999999999999999999 89999999999999999999999999999976433221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +... .+......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-----~~~~--------~i~~~~~~--- 214 (316)
T cd05592 152 -KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-----ELFD--------SILNDRPH--- 214 (316)
T ss_pred -ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHcCCCC---
Confidence 223456899999999999888999999999999999999999999753221 1111 11111000
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH-HHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAK-EIVTR 984 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~-evl~~ 984 (1002)
.+..++..+.+++.+||+.+|++||++. ++++|
T Consensus 215 -----~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 215 -----FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred -----CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 0112345678999999999999999875 56554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=334.85 Aligned_cols=248 Identities=20% Similarity=0.272 Sum_probs=194.4
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||.||+|+.. +++.||+|++.+.. ......+..|+.++.++ +||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~----~~~lv~E 76 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----RLFFVIE 76 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC----EEEEEEe
Confidence 46999999999999854 68899999997642 23445677899988877 7999999999988776 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..++.||+.|++||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~- 151 (329)
T cd05618 77 YVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD- 151 (329)
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-
Confidence 999999998886654 4899999999999999999999 89999999999999999999999999999875432221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc---ccHHHHHHHHHhhhhhhcccCccC
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG---MTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
......||..|+|||++.+..++.++|||||||++|||++|+.||....... .....+..... ......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i-------~~~~~~ 223 (329)
T cd05618 152 -TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-------LEKQIR 223 (329)
T ss_pred -ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH-------hcCCCC
Confidence 1234568999999999999999999999999999999999999996422211 11111111111 111100
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC------HHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN------AKEIVTR 984 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt------~~evl~~ 984 (1002)
.+......+.+++.+||+.||++||+ +.++++|
T Consensus 224 --------~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 224 --------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred --------CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 11223456889999999999999998 4688776
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=334.92 Aligned_cols=248 Identities=19% Similarity=0.264 Sum_probs=195.3
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||.||+|+.. +++.||||++++.. ....+.+..|+.+++++ +||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~----~~~lv~e 76 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES----RLFFVIE 76 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC----EEEEEEe
Confidence 46999999999999854 68999999997542 23345678899999998 7999999999998766 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~- 151 (329)
T cd05588 77 FVSGGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD- 151 (329)
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC-
Confidence 999999999887654 4899999999999999999999 89999999999999999999999999999875322211
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccc---cccHHHHHHHHHhhhhhhcccCccC
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE---GMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ......+..... ......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 223 (329)
T cd05588 152 -TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI-------LEKQIR 223 (329)
T ss_pred -ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH-------HcCCCC
Confidence 123456899999999999989999999999999999999999999643211 111112211111 111100
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC------HHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN------AKEIVTR 984 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt------~~evl~~ 984 (1002)
.+...+..+.+++.+|++.+|.+||+ ++++++|
T Consensus 224 --------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 224 --------IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred --------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 11123456889999999999999997 6788876
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=326.08 Aligned_cols=254 Identities=24% Similarity=0.330 Sum_probs=201.6
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
++|++.+.||+|+||.||+|+. .+++.||+|++..........+++|+.++++++||||+++++++...+ ..++|
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~----~~~iv 84 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE----KLWIC 84 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC----EEEEE
Confidence 4699999999999999999985 578899999987655455667889999999999999999999987766 56799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++.... .+++..+..++.|+++|++||| +.+|+|||+||+||+++.++.+||+|||++..+....
T Consensus 85 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 85 MEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 99999999999987554 4889999999999999999999 8999999999999999999999999999998664322
Q ss_pred ceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 865 QFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
. ......|+..|+|||.+. ...++.++||||+||++|||++|+.||........ ...+....
T Consensus 161 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-------------~~~~~~~~ 225 (267)
T cd06646 161 A--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-------------LFLMSKSN 225 (267)
T ss_pred c--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-------------heeeecCC
Confidence 1 113346788999999864 34578899999999999999999999865322111 00111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..... .......+..+.+++.+||..+|++||+++++++++
T Consensus 226 ~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 226 FQPPK---LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCC---CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00000 000112346788999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=347.94 Aligned_cols=250 Identities=20% Similarity=0.277 Sum_probs=195.0
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.|+..++||+|+||+||+|+. .+++.||+|++.+.. ......+.+|++++++++||||+++++++...+ ..+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~----~~~ 77 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD----NLY 77 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC----EEE
Confidence 588899999999999999985 468899999987542 234567888999999999999999999998776 678
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++.+.+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 78 lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~ 153 (382)
T cd05625 78 FVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (382)
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence 9999999999999997654 4788889999999999999999 89999999999999999999999999999753321
Q ss_pred CCc---------------------------------------------eeeeccCCCCcccccccccCCCCcCcccchHH
Q 037042 863 EDQ---------------------------------------------FVTQTQTPATIGYMALEYGSEGRVSTNGDVYN 897 (1002)
Q Consensus 863 ~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS 897 (1002)
... .......+||+.|+|||++.+..|+.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (382)
T cd05625 154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence 000 00011246899999999999989999999999
Q ss_pred HHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc--CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCC
Q 037042 898 FGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD--GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKR 975 (1002)
Q Consensus 898 lGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 975 (1002)
+||++|||++|+.||........ ..++.. .....+. .......+.+++.+|+ .+|++|
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~-------------~~~i~~~~~~~~~p~------~~~~s~~~~~li~~l~-~~p~~R 293 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQTPLET-------------QMKVINWQTSLHIPP------QAKLSPEASDLIIKLC-RGPEDR 293 (382)
T ss_pred chHHHHHHHhCCCCCCCCCHHHH-------------HHHHHccCCCcCCCC------cccCCHHHHHHHHHHc-cCHhHc
Confidence 99999999999999975322110 001111 0000000 0112345677777766 499999
Q ss_pred CC---HHHHHHH
Q 037042 976 IN---AKEIVTR 984 (1002)
Q Consensus 976 pt---~~evl~~ 984 (1002)
++ +.|+++|
T Consensus 294 ~~~~~~~ei~~h 305 (382)
T cd05625 294 LGKNGADEIKAH 305 (382)
T ss_pred CCCCCHHHHhcC
Confidence 97 9998877
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=341.36 Aligned_cols=257 Identities=24% Similarity=0.410 Sum_probs=201.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 777 (1002)
++|.+.++||+|+||.||+|++. .++.||||+++... ....+.+..|++++.++. |||||++++++...+
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~-- 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG-- 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC--
Confidence 45778899999999999999853 34689999997543 233456889999999997 999999999998765
Q ss_pred hHHHHHhhccCCCCChhHhhhccC--------------------------------------------------------
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN-------------------------------------------------------- 801 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------------------------- 801 (1002)
..++||||+++|+|.+++++.+
T Consensus 115 --~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 115 --PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred --CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 5689999999999999986532
Q ss_pred -----------------------------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCC
Q 037042 802 -----------------------------------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840 (1002)
Q Consensus 802 -----------------------------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~N 840 (1002)
..+++..+..++.|++.|++||| +++|+||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcce
Confidence 13566778899999999999999 8999999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCccccccc
Q 037042 841 VLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEG 919 (1002)
Q Consensus 841 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~ 919 (1002)
|++++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||......+
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 9999999999999999986543322222233456788999999988889999999999999999998 889986532111
Q ss_pred ccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 920 MTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
. .. +.+...... ..+..++..+.+++.+||+.+|++||+++|+++.|+++
T Consensus 350 ~----~~---------~~~~~~~~~------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 350 Q----FY---------NAIKRGYRM------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred H----HH---------HHHHcCCCC------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0 00 000000000 01122456789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=330.33 Aligned_cols=263 Identities=25% Similarity=0.418 Sum_probs=204.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC-----------------CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcce
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD-----------------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIK 766 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 766 (1002)
..+|+..+.||+|+||.||+|+..+ +..||+|++.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578899999999999999987542 2468999987653 335677889999999999999999
Q ss_pred eeeEEecCchhhHHHHHhhccCCCCChhHhhhccC----------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccC
Q 037042 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN----------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDL 836 (1002)
Q Consensus 767 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDl 836 (1002)
+++++...+ ..++|+||+++++|.+++.... ..+++..++.++.|++.|++||| +.+|+||||
T Consensus 84 ~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dl 156 (296)
T cd05051 84 LLGVCTVDP----PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDL 156 (296)
T ss_pred EEEEEecCC----CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCcccccc
Confidence 999998765 6689999999999999987654 25889999999999999999999 899999999
Q ss_pred CCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh--CCCCCcc
Q 037042 837 KPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT--GKKPTNE 914 (1002)
Q Consensus 837 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~~P~~~ 914 (1002)
||+||+++.++.++|+|||+++.....+.........++..|+|||+..+..++.++|||||||++|||++ |..||..
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 157 ATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred chhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999987654443333334456788999999888889999999999999999998 6777754
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
..... ........... .+...... .+..++..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 237 ~~~~~--~~~~~~~~~~~-----~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 237 LTDQQ--VIENAGHFFRD-----DGRQIYLP------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred cChHH--HHHHHHhcccc-----ccccccCC------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 32111 11111100000 00000000 112234679999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=331.67 Aligned_cols=263 Identities=28% Similarity=0.447 Sum_probs=208.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
.++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ......+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456888899999999999999631 34579999987543 33456788999999999 899999999998876
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
. ..++||||+++|+|.+++...+ ..+++.++..++.||++|++||| +++|+||||||+
T Consensus 94 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~ 166 (304)
T cd05101 94 G----PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAAR 166 (304)
T ss_pred C----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccc
Confidence 5 5689999999999999987532 24678889999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
||++++++.+||+|||+++.+.............++..|+|||+..+..++.++|||||||++|||++ |..||....
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-- 244 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-- 244 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--
Confidence 99999999999999999987754433322333456778999999988889999999999999999998 788875431
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
..++.... ...... ..+..++..+.+++.+||+.+|++||++.|+++.|+++.....+
T Consensus 245 ---~~~~~~~~--------~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~~ 302 (304)
T cd05101 245 ---VEELFKLL--------KEGHRM-------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTTN 302 (304)
T ss_pred ---HHHHHHHH--------HcCCcC-------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhhc
Confidence 11221111 000000 01123456789999999999999999999999999998765443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=324.21 Aligned_cols=257 Identities=26% Similarity=0.435 Sum_probs=198.0
Q ss_pred CCCceeeccCcceEEEEEeCC-Cc--EEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHHH
Q 037042 709 SENNLIGRGGFGSVYKARIQD-GM--EVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALFK 781 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~~ 781 (1002)
.+.+.||+|+||.||+|++.+ +. .||+|.++.. .....+.+..|++++++++||||+++++++..... .....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999998654 33 6999988654 23345678889999999999999999998754321 11235
Q ss_pred HHhhccCCCCChhHhhhcc-----CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 782 ALALEYMPHGSLEKYLYSS-----NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
++||||+++|+|.+++... ...+++.....++.|++.|++||| +++|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCc
Confidence 7899999999999887422 224789999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
++.+.............++..|+|||+..+..++.++|||||||++|||++ |+.||..... ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~------- 226 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-----SEIYDY------- 226 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH-------
Confidence 987654433222233346778999999988889999999999999999999 8888865221 111111
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
+..+.... .+..++..+.+++.+||+.+|++|||+.|++++|+++
T Consensus 227 -~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 227 -LRQGNRLK-------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -HHcCCCCC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11111000 0112445689999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=329.18 Aligned_cols=254 Identities=25% Similarity=0.429 Sum_probs=201.7
Q ss_pred CCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
+|+..+.||+|+||.||+|+.. ++..||+|+++.... .....+.+|+.++++++||||+++++++...+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~---- 81 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ---- 81 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC----
Confidence 4667788999999999999753 257899999975533 23466889999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhcc---------------CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC
Q 037042 780 FKALALEYMPHGSLEKYLYSS---------------NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~ 844 (1002)
..++++||+++++|.+++... +..+++..+..++.|++.|++|+| +++|+||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVF 158 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEec
Confidence 567999999999999998532 124788889999999999999999 89999999999999999
Q ss_pred CCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHH
Q 037042 845 DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLK 923 (1002)
Q Consensus 845 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~ 923 (1002)
+++.+||+|||+++...............+++.|+|||...++.++.++|||||||++|||++ |..||..... .
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~ 233 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----Q 233 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----H
Confidence 999999999999987654433222234456788999999888889999999999999999998 8888865321 1
Q ss_pred HHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 924 HWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 924 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
++... +.++.... .+..++..+.+++.+||+.+|++||++.++++.|+.
T Consensus 234 ~~~~~--------i~~~~~~~-------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 DVIEM--------IRNRQVLP-------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHH--------HHcCCcCC-------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11111 11111100 122356778999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=337.30 Aligned_cols=261 Identities=24% Similarity=0.430 Sum_probs=201.8
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|++ .+++.||||+++... ......+.+|+.++.++ +||||+++++++...+.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35799999999999999999973 347889999997543 23456788899999999 68999999998865432
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-------------------------------------------------------
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN------------------------------------------------------- 801 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~------------------------------------------------------- 801 (1002)
..++||||+++|+|.+++....
T Consensus 86 ---~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (343)
T cd05103 86 ---PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE 162 (343)
T ss_pred ---ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence 4578999999999999986432
Q ss_pred -----------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeec
Q 037042 802 -----------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870 (1002)
Q Consensus 802 -----------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 870 (1002)
..+++..+..++.||++|++||| +++|+||||||+||+++.++.+||+|||++.............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 239 (343)
T cd05103 163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKG 239 (343)
T ss_pred hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcC
Confidence 13577888899999999999999 8999999999999999999999999999998754332222222
Q ss_pred cCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhH
Q 037042 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949 (1002)
Q Consensus 871 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 949 (1002)
...++..|+|||+..+..++.++|||||||++|||++ |..||........ .... +..+....
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----~~~~--------~~~~~~~~----- 302 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRR--------LKEGTRMR----- 302 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH----HHHH--------HhccCCCC-----
Confidence 3345678999999888889999999999999999997 9999865322111 0000 00000000
Q ss_pred HHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.+......+.+++.+||+.+|++||++.|++++|+.+-.
T Consensus 303 --~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 303 --APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred --CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011123468899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=321.27 Aligned_cols=253 Identities=25% Similarity=0.435 Sum_probs=203.1
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|++.++||+|+||+||+|+..++..||+|++..... ..+.+.+|++++++++||||+++++++... ..++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CcEEEE
Confidence 46889999999999999999887777899999875432 346788999999999999999999987543 347999
Q ss_pred ccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 786 EYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||+++|+|.+++.... ..+++..+..++.|+++||+|+| +.+|+||||||+||++++++.+||+|||.++.+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 9999999999997643 35789999999999999999999 8999999999999999999999999999998765433
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......++..|+|||+..+..++.++|||||||++|||++ |..||....... ... .+......
T Consensus 157 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-----~~~--------~~~~~~~~ 222 (262)
T cd05071 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLD--------QVERGYRM 222 (262)
T ss_pred cc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-----HHH--------HHhcCCCC
Confidence 21 1223456778999999888889999999999999999999 888886532211 000 11111000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
..+..++..+.+++.+|++++|++||++.++++.|+..
T Consensus 223 -------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 -------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -------CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 01123456789999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=326.38 Aligned_cols=256 Identities=27% Similarity=0.418 Sum_probs=201.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|+..+.||+|+||.||+|.+. .+..||+|.+.... ......+..|+.++++++|+||+++++++...+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL-- 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--
Confidence 456888999999999999999864 35679999886543 233456888999999999999999999887665
Q ss_pred hHHHHHhhccCCCCChhHhhhccCC------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC---c
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNY------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM---V 848 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~---~ 848 (1002)
..++||||+++|+|.+++...+. .+++..+.+++.||+.|++||| +++++||||||+||+++.++ .
T Consensus 83 --~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 83 --PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred --CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcc
Confidence 45799999999999999976532 5889999999999999999999 88999999999999998654 6
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~ 927 (1002)
+||+|||+++................+..|+|||+..+..++.++|||||||++|||++ |+.||.....+ ....
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-----~~~~ 232 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-----EVME 232 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHH
Confidence 99999999987643332222223334567999999988889999999999999999997 99998753221 1111
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.+....... .+..++..+.+++.+|++.+|++||++.+|+++|++
T Consensus 233 ---------~~~~~~~~~------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 233 ---------FVTGGGRLD------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred ---------HHHcCCcCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 110000000 112245678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=343.40 Aligned_cols=380 Identities=29% Similarity=0.465 Sum_probs=303.3
Q ss_pred cEEEEEeCCCCCc-cccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 54 RVTALNISHLSLS-GTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 54 ~v~~L~l~~~~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
-|+.+|+++|+++ +.+|.....+++++.|.|...++. .+|..++.|.+|++|.+++|++. .+-..+ +.||.|+.++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGEL-s~Lp~LRsv~ 84 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGEL-SDLPRLRSVI 84 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhh-ccchhhHHHh
Confidence 4788999999999 578999999999999999999998 89999999999999999999997 344444 5799999999
Q ss_pred CCCCccc-ccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcc
Q 037042 133 LSKNMFH-GGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFS 211 (1002)
Q Consensus 133 Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~ 211 (1002)
+.+|++. .-+|..+..+..|.+||||+|+++ ..|..+..-+++-.|+||+|++.
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie------------------------ 139 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE------------------------ 139 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc------------------------
Confidence 9999987 358888999999999999999998 88999999999999999999998
Q ss_pred cCCCCcc-ccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccc-cccc
Q 037042 212 KCEIPNE-IGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS-GSIP 289 (1002)
Q Consensus 212 ~~~~p~~-l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p 289 (1002)
.||+. +-+|+.|-.||||+|++. .+|..+..+..|++|+|++|.+. ..+--..-.+++|+.|++++.+-+ .-+|
T Consensus 140 --tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~-hfQLrQLPsmtsL~vLhms~TqRTl~N~P 215 (1255)
T KOG0444|consen 140 --TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLN-HFQLRQLPSMTSLSVLHMSNTQRTLDNIP 215 (1255)
T ss_pred --cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhh-HHHHhcCccchhhhhhhcccccchhhcCC
Confidence 57765 458899999999999998 56777888999999999999875 111111113567778888876543 3477
Q ss_pred ccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccc
Q 037042 290 NFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKS 369 (1002)
Q Consensus 290 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 369 (1002)
.++..+.+|..+|||.|++. +.|+++.++.+|+.|+||+|+|+.+.... ....+|++|+||.|+++
T Consensus 216 tsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~------~~W~~lEtLNlSrNQLt------- 281 (1255)
T KOG0444|consen 216 TSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTE------GEWENLETLNLSRNQLT------- 281 (1255)
T ss_pred CchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccH------HHHhhhhhhccccchhc-------
Confidence 77888888888888888887 77888888888888888888888776432 33445556666655554
Q ss_pred cccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccC-ccCCccccCCCCCCEEEccCCcccccCCccccCCcc
Q 037042 370 VGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN-GSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAK 448 (1002)
Q Consensus 370 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 448 (1002)
.+|+.+..++.|+.|++.+|+++ .-+|..++++.+|+++..++|.+. .+|+.++.+.+
T Consensus 282 --------------------~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~k 340 (1255)
T KOG0444|consen 282 --------------------VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVK 340 (1255)
T ss_pred --------------------cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHH
Confidence 56888888899999999999886 447888899999999999999888 78888999999
Q ss_pred ccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceee
Q 037042 449 VYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLN 501 (1002)
Q Consensus 449 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 501 (1002)
|+.|.|+.|++. .+|+.+.-++.|+.|||..|.=.-.+|..-..-++|++-+
T Consensus 341 L~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYN 392 (1255)
T KOG0444|consen 341 LQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYN 392 (1255)
T ss_pred HHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeee
Confidence 999999999887 6888888888899999988854333333222224444433
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=344.43 Aligned_cols=253 Identities=21% Similarity=0.241 Sum_probs=200.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++.+.. ....+.+..|+++++.++||||+++++++..+. .
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~----~ 117 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK----Y 117 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC----E
Confidence 457999999999999999999854 68999999997532 223455778999999999999999999988766 6
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++... .++...+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||++...
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 78999999999999998654 3778888899999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCC----CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEG----RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .. ..+
T Consensus 193 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~--------~~~ 258 (370)
T cd05596 193 DANGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GT--------YSK 258 (370)
T ss_pred cCCCcc-cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-----HH--------HHH
Confidence 533221 12345799999999987543 4789999999999999999999999763221 10 111
Q ss_pred cccCc--cCChhhhHHHhHHHHHHHHHHHHhHccccCCCC--CCCHHHHHHHHH
Q 037042 937 IVDGS--LLSREDIQFVAKEQCMSFVFNMAMECTVESPEK--RINAKEIVTRLL 986 (1002)
Q Consensus 937 i~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~evl~~L~ 986 (1002)
+.+.. ...+. ....+..+.+++.+|++.+|++ ||++.|+++|-+
T Consensus 259 i~~~~~~~~~~~------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 259 IMDHKNSLTFPD------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred HHcCCCcCCCCC------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 11110 00010 1123567889999999999988 999999998853
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=343.52 Aligned_cols=256 Identities=21% Similarity=0.231 Sum_probs=199.5
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..++|+..+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|+.+++.++||||+++++++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~---- 116 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK---- 116 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----
Confidence 3467999999999999999999865 68899999987531 223456778999999999999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||+++++.+||+|||+|..
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEeccccee
Confidence 678999999999999999654 3788889999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCC----CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEG----RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
...... .......||+.|||||++.+. .++.++||||+||++|||++|+.||...... .. ..
T Consensus 192 ~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-----~~--------~~ 257 (370)
T cd05621 192 MDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-----GT--------YS 257 (370)
T ss_pred cccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-----HH--------HH
Confidence 653322 122345799999999987653 3789999999999999999999999753211 11 11
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCC--CCCHHHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEK--RINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~evl~~L~ 986 (1002)
++.+....... ......+..+.+++.+|+...|.+ |+++.|+++|-+
T Consensus 258 ~i~~~~~~~~~----p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 258 KIMDHKNSLNF----PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred HHHhCCcccCC----CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 12111100000 001123456788899999865544 899999999954
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=333.67 Aligned_cols=242 Identities=20% Similarity=0.275 Sum_probs=190.8
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||.||+|+.. +|+.||+|++++.. .........|.+++... +||||+++++++...+ ..++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~~lv~E 76 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE----HLFFVME 76 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC----EEEEEEC
Confidence 46999999999999865 68899999997542 22345566788888765 8999999999998776 6789999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++.... .+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05620 77 FLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN- 151 (316)
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC-
Confidence 999999999987654 4889999999999999999999 89999999999999999999999999999875332221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||..|+|||++.+..++.++||||+||++|||++|+.||...... ..... +.. ..+..
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~-----~~~~~-----~~~-~~~~~---- 215 (316)
T cd05620 152 -RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED-----ELFES-----IRV-DTPHY---- 215 (316)
T ss_pred -ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHH-----HHh-CCCCC----
Confidence 223456899999999999999999999999999999999999999753211 11111 000 00000
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH-HHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAK-EIVTR 984 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~-evl~~ 984 (1002)
+..+...+.+++.+||+.||++||++. ++.+|
T Consensus 216 ------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 216 ------PRWITKESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred ------CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 111345678999999999999999985 66644
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=334.56 Aligned_cols=254 Identities=26% Similarity=0.447 Sum_probs=213.9
Q ss_pred CCCCceeeccCcceEEEEEe-CCC----cEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 708 FSENNLIGRGGFGSVYKARI-QDG----MEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
....++||+|+||+||+|.| .+| -+||+|++... .....+++..|+-+|.+++|||+++++|+|.... .
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-----~ 772 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-----L 772 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-----H
Confidence 44568999999999999975 344 46899988654 3445788999999999999999999999998664 6
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
.||++||+.|+|.||++.++..+.....+.|.+|||+||.||| .+++|||||.++|||+..-..+||+|||+|+...
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 7999999999999999999888999999999999999999999 9999999999999999999999999999999888
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.++.........-++.|||-|.+....|+.++|||||||++||++| |..|++...-++ +.+.+.
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------------I~dlle- 914 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------------IPDLLE- 914 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------------hhHHHh-
Confidence 7765555455556788999999999999999999999999999999 999987642221 111111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.+.+...|+.|...++.+|.+||..|+..||+++++...+.++-
T Consensus 915 -----~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 915 -----KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred -----ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 11223345678899999999999999999999999998877653
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=348.17 Aligned_cols=253 Identities=19% Similarity=0.237 Sum_probs=196.4
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+|++.+.||+|+||+||+|+.. +++.||||++.+.. ......+.+|++++++++||||+++++++..++ ..+
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~----~~~ 77 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD----NLY 77 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC----EEE
Confidence 6889999999999999999854 68999999987532 223466788999999999999999999998776 678
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++...+ .++...+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|..+..
T Consensus 78 lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 78 FVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 9999999999999997654 4788888999999999999999 89999999999999999999999999999853321
Q ss_pred CCc-----------------------------------------eeeeccCCCCcccccccccCCCCcCcccchHHHHHH
Q 037042 863 EDQ-----------------------------------------FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVM 901 (1002)
Q Consensus 863 ~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~ 901 (1002)
... ........||+.|||||++.+..++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 000 000123469999999999999899999999999999
Q ss_pred HHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC---CH
Q 037042 902 LMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI---NA 978 (1002)
Q Consensus 902 l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp---t~ 978 (1002)
+|||++|+.||....... .... +... ....... .....+..+.+++.+|+ .+|.+|+ ++
T Consensus 234 lyell~G~~Pf~~~~~~~-----~~~~-----i~~~-~~~~~~~------~~~~~s~~~~~li~~l~-~~p~~R~~~~t~ 295 (376)
T cd05598 234 LYEMLVGQPPFLADTPAE-----TQLK-----VINW-ETTLHIP------SQAKLSREASDLILRLC-CGAEDRLGKNGA 295 (376)
T ss_pred eeehhhCCCCCCCCCHHH-----HHHH-----Hhcc-CccccCC------CCCCCCHHHHHHHHHHh-cCHhhcCCCCCH
Confidence 999999999997643211 1110 0000 0000000 00123345677888876 4999999 89
Q ss_pred HHHHHHH
Q 037042 979 KEIVTRL 985 (1002)
Q Consensus 979 ~evl~~L 985 (1002)
.|+++|-
T Consensus 296 ~ell~h~ 302 (376)
T cd05598 296 DEIKAHP 302 (376)
T ss_pred HHHhCCC
Confidence 9999883
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=329.78 Aligned_cols=251 Identities=21% Similarity=0.310 Sum_probs=200.0
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.|+..+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++..++ ..+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~ 76 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----ALC 76 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC----eEE
Confidence 3778899999999999999854 68999999987532 122345678999999999999999999987766 678
Q ss_pred HhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
+||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 77 LVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred EEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 9999999999998886543 35899999999999999999999 8999999999999999999999999999998654
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.... .....|+..|+|||++.+..++.++||||+||++|||++|+.||...... .....+. ..+...
T Consensus 154 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~---------~~~~~~ 220 (285)
T cd05605 154 EGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVE---------RRVKED 220 (285)
T ss_pred CCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHH---------HHhhhc
Confidence 3221 13456889999999998888999999999999999999999999753211 1001110 000000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
.. ..+...+..+.+++.+||+.||++|| ++.++++|
T Consensus 221 ~~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 QE-------EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cc-------ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00 01122456688999999999999999 89999887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=330.63 Aligned_cols=257 Identities=28% Similarity=0.472 Sum_probs=203.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||.||+|... ....||+|++.... ......+.+|+++++++ +||||+++++++...+
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 89 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG- 89 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC-
Confidence 456888899999999999999753 24679999987542 33456688899999999 7999999999987766
Q ss_pred hhHHHHHhhccCCCCChhHhhhcc---------------CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCe
Q 037042 777 KALFKALALEYMPHGSLEKYLYSS---------------NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNV 841 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NI 841 (1002)
..++||||+++|+|.++++.. ...+++..++.++.|++.|++||| +.+|+||||||+||
T Consensus 90 ---~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Ni 163 (293)
T cd05053 90 ---PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNV 163 (293)
T ss_pred ---CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeE
Confidence 568999999999999998642 235888999999999999999999 89999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccc
Q 037042 842 LLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGM 920 (1002)
Q Consensus 842 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~ 920 (1002)
++++++.+||+|||+++.+.............++..|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-- 241 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-- 241 (293)
T ss_pred EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--
Confidence 999999999999999987655433222223345678999999888889999999999999999998 99998653211
Q ss_pred cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
+.... +..+... . .+..+...+.+++.+||..+|++|||+.|++++|+++
T Consensus 242 ---~~~~~--------~~~~~~~-~------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 242 ---ELFKL--------LKEGYRM-E------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred ---HHHHH--------HHcCCcC-C------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 11110 0000000 0 1122346788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=348.70 Aligned_cols=269 Identities=24% Similarity=0.288 Sum_probs=196.5
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCc----hhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGD----FKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~~ 779 (1002)
..+|+..+.||+|+||+||+|.. .+++.||||++.... ....+|+.++++++||||+++++++.... ....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 45799999999999999999985 468999999886432 23457999999999999999998764422 1112
Q ss_pred HHHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEeccc
Q 037042 780 FKALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFG 855 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfG 855 (1002)
+.++||||+++ ++.+++.. ....+++..++.++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 34689999975 77776643 3346889999999999999999999 8999999999999999865 479999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH---h
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL---L 931 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~---~ 931 (1002)
+|+.+...... ....||+.|+|||++.+ ..|+.++||||+||++|||++|++||....... .+...+.... .
T Consensus 217 la~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 217 SAKNLLAGQRS---VSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPTE 292 (440)
T ss_pred cchhccCCCCc---ccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCH
Confidence 99876543321 23467899999998765 468999999999999999999999997642211 1111111100 0
Q ss_pred hhhhh-------cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 ISIMK-------IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 ~~~~~-------i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+.... +.-+.. .........+...+..+.+++.+||+++|.+|||+.|+++|-+
T Consensus 293 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDV-KPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred HHHHHhchhhhcccCCcc-CchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 00000 000000 0111122223334567899999999999999999999998843
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=333.81 Aligned_cols=242 Identities=23% Similarity=0.285 Sum_probs=194.4
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|+.. +++.||||++++.. ......+..|+++++.+ +||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~----~~~lv~e 76 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD----RLFFVME 76 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC----EEEEEEc
Confidence 46999999999999865 58899999998542 23345667888999888 7999999999988766 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 151 (318)
T cd05570 77 YVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV- 151 (318)
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-
Confidence 999999999887654 4899999999999999999999 89999999999999999999999999999875322221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||..|+|||++.+..++.++|||||||++|||++|+.||...... .... .+......
T Consensus 152 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-----~~~~--------~i~~~~~~--- 214 (318)
T cd05570 152 -TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-----ELFQ--------SILEDEVR--- 214 (318)
T ss_pred -cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-----HHHH--------HHHcCCCC---
Confidence 112346899999999999999999999999999999999999999653211 1111 11111111
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTR 984 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~ 984 (1002)
.+...+..+.+++.+||+.+|.+||++ .++++|
T Consensus 215 -----~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 215 -----YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred -----CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 011234668899999999999999999 888876
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=334.92 Aligned_cols=247 Identities=21% Similarity=0.273 Sum_probs=195.7
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
+|+..+.||+|+||+||+|+.. +++.||+|++.+.. .........|.+++..+ +|++|+++++++...+ ..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~ 76 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD----RL 76 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC----EE
Confidence 4788899999999999999865 57899999987542 22334566788888877 5899999999988766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 77 ~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~ 152 (323)
T cd05616 77 YFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM 152 (323)
T ss_pred EEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence 89999999999999987654 4889999999999999999999 8999999999999999999999999999997543
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .+....
T Consensus 153 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-----~~~~--------~i~~~~ 217 (323)
T cd05616 153 WDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQ--------SIMEHN 217 (323)
T ss_pred CCCC--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHhCC
Confidence 2221 223456899999999999999999999999999999999999999763221 1111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~ 984 (1002)
... +...+..+.+++.+|++.+|++|++. .++.+|
T Consensus 218 ~~~--------p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 218 VAY--------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred CCC--------CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 110 11234567899999999999999984 666654
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=328.47 Aligned_cols=257 Identities=25% Similarity=0.412 Sum_probs=203.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
++|...+.||+|+||.||+|+.. .+..||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG-- 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC--
Confidence 46888999999999999999741 35579999987543 33456788999999999 7999999999988766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++||||+++|+|.++++.... .+++.++..++.|++.|++||| +++|+||||||+||+++.++.+|++|||+
T Consensus 113 --~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 113 --PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred --ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 56899999999999999976443 4899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
++...............++..|+|||.+.+..++.++||||+||++|||++ |..||........ ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-~~------------ 254 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FY------------ 254 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-HH------------
Confidence 986654332222223346778999999988889999999999999999998 9999865322111 00
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
+..+...... .+...+..+.+++.+|++++|++|||+.|+++.|++.
T Consensus 255 ~~~~~~~~~~------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 255 KLIKEGYRMA------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHcCCcCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0111000000 0112245689999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=331.81 Aligned_cols=259 Identities=27% Similarity=0.425 Sum_probs=204.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCc
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGD 775 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 775 (1002)
++|.+.+.||+|+||.||+|+.. ++..||+|++.... ......+..|+++++++ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56889999999999999999742 23569999997543 33456788899999999 7999999999998776
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCC
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~N 840 (1002)
..++||||+++|+|.+++...+ ..+++.+++.++.|++.|++||| +.+++||||||+|
T Consensus 98 ----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~N 170 (307)
T cd05098 98 ----PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN 170 (307)
T ss_pred ----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHh
Confidence 5689999999999999997642 24788899999999999999999 8999999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCccccccc
Q 037042 841 VLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEG 919 (1002)
Q Consensus 841 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~ 919 (1002)
|+++.++.+||+|||.++...............++..|+|||+..+..++.++|||||||++|||++ |..||....
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~--- 247 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--- 247 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC---
Confidence 9999999999999999976643322211222334568999999988889999999999999999998 888885421
Q ss_pred ccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 920 MTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..+.... ....... ..+..++..+.+++.+||..+|++||++.|++++|+++...
T Consensus 248 --~~~~~~~---------~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 --VEELFKL---------LKEGHRM------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred --HHHHHHH---------HHcCCCC------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1111111 0000000 01123456788999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=332.24 Aligned_cols=242 Identities=21% Similarity=0.311 Sum_probs=190.8
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|+.. +++.||||+++... .........|..+++.. +||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~----~~~lv~e 76 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE----NLFFVME 76 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC----EEEEEEe
Confidence 46999999999999865 58899999997642 22345566788888764 8999999999998776 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 y~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05619 77 YLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA- 151 (316)
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-
Confidence 999999999997653 4888999999999999999999 89999999999999999999999999999875432221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||..|+|||++.+..++.++||||+||++|||++|+.||...... +..... ......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~~i------~~~~~~----- 214 (316)
T cd05619 152 -KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-----ELFQSI------RMDNPC----- 214 (316)
T ss_pred -ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-----HHHHHH------HhCCCC-----
Confidence 123456899999999998889999999999999999999999999753211 111110 000000
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH-HHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAK-EIVTR 984 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~-evl~~ 984 (1002)
.+......+.+++.+||+.+|++||++. ++.+|
T Consensus 215 -----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 215 -----YPRWLTREAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred -----CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 0111335678999999999999999997 66554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=327.51 Aligned_cols=256 Identities=27% Similarity=0.446 Sum_probs=202.0
Q ss_pred CCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
+|+..+.||+|+||.||+|+.. ....||+|.+..... .....+..|+.++++++||||+++++++...+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 76 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG---- 76 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC----
Confidence 3777899999999999999742 235799998875532 34567889999999999999999999987766
Q ss_pred HHHHhhccCCCCChhHhhhccC-----------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN-----------------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDL 836 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDl 836 (1002)
..++|+||+++|+|.+++.... ..+++..++.++.|++.|++||| +.+|+||||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~di 153 (290)
T cd05045 77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDL 153 (290)
T ss_pred CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhh
Confidence 5689999999999999886421 24778899999999999999999 899999999
Q ss_pred CCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCccc
Q 037042 837 KPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEI 915 (1002)
Q Consensus 837 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~ 915 (1002)
||+||++++++.+||+|||+++...............++..|+|||+..+..++.++|||||||++|||++ |..||...
T Consensus 154 kp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 154 AARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred hhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999986644332222233456778999999888889999999999999999999 99998653
Q ss_pred ccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 916 FNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.. ..+... ........ .+..++..+.+++.+||+.+|++||++.|+++.|+++-
T Consensus 234 ~~-----~~~~~~---------~~~~~~~~------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 234 AP-----ERLFNL---------LKTGYRME------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred CH-----HHHHHH---------HhCCCCCC------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 21 111111 11100000 11223457889999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=320.27 Aligned_cols=248 Identities=25% Similarity=0.430 Sum_probs=197.1
Q ss_pred eeeccCcceEEEEEeC---CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 713 LIGRGGFGSVYKARIQ---DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 713 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
.||+|+||+||+|.+. ++..||+|++..... ...+.+.+|+.++++++||||+++++++... ..++||||+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~-----~~~lv~e~~ 76 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE-----ALMLVMEMA 76 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC-----CeEEEEEeC
Confidence 3899999999999753 356799999876533 3346788999999999999999999988543 357999999
Q ss_pred CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCcee-
Q 037042 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV- 867 (1002)
Q Consensus 789 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~- 867 (1002)
++|+|.+++......+++..+.+++.|++.|++||| +++++||||||+||+++.++.+||+|||++..........
T Consensus 77 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 77 SGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 999999999866667899999999999999999999 8999999999999999999999999999998665433221
Q ss_pred eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 868 TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 868 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......++..|+|||+.....++.++|||||||++||+++ |..||...... .+... +..+...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~--------~~~~~~~--- 217 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-----EVMSF--------IEQGKRL--- 217 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHH--------HHCCCCC---
Confidence 1222334678999999888889999999999999999996 99998764221 11111 0010000
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
..+..++..+.+++.+||..+|++||++.+|.+.|+.+
T Consensus 218 ----~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 ----DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 01123457788999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=354.34 Aligned_cols=261 Identities=25% Similarity=0.311 Sum_probs=202.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.++||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++..++ ..
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~----~l 77 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD----PV 77 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC----EE
Confidence 47899999999999999999864 68999999987542 234567889999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhcc----------CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 782 ALALEYMPHGSLEKYLYSS----------NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
++||||++||+|.+++... ....++..+..++.||++||+||| +++|+||||||+||+++.++.+||
T Consensus 78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKL 154 (932)
T PRK13184 78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVI 154 (932)
T ss_pred EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEE
Confidence 8999999999999988642 113556778899999999999999 899999999999999999999999
Q ss_pred ecccccccccCCCc----------------eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccc
Q 037042 852 SDFGITKLLTREDQ----------------FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915 (1002)
Q Consensus 852 ~DfGla~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~ 915 (1002)
+|||+++....... ........||+.|||||+..+..++.++||||+||++|||+||+.||...
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 99999986621110 00111246899999999999999999999999999999999999999653
Q ss_pred ccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-CHHHHHHHHHhhccc
Q 037042 916 FNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-NAKEIVTRLLKINDL 991 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-t~~evl~~L~~i~~~ 991 (1002)
........ ..+.++. ........+..+.+++.+|++.+|++|| +++++.+.|+..-..
T Consensus 235 ~~~ki~~~-----------~~i~~P~-------~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 235 KGRKISYR-----------DVILSPI-------EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred chhhhhhh-----------hhccChh-------hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 21111000 0000000 0001123456788999999999999997 577777778776543
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=325.46 Aligned_cols=260 Identities=24% Similarity=0.381 Sum_probs=207.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC-----CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD-----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.++|+..+.||+|+||.||+|...+ +..||+|++.... ......+.+|+.++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-- 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE-- 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC--
Confidence 4678889999999999999998654 6889999987543 3345778899999999999999999998766421
Q ss_pred HHHHHhhccCCCCChhHhhhccC-------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 779 LFKALALEYMPHGSLEKYLYSSN-------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~-------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
..++++||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+||
T Consensus 83 -~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 83 -PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred -CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEE
Confidence 4579999999999999987642 35889999999999999999999 899999999999999999999999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
+|||+++.+.............++..|+|||+..+..++.++|||||||++||+++ |+.||..... ..+..+..
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~--- 233 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLK--- 233 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHH---
Confidence 99999987654433222233456778999999888889999999999999999999 9999865321 11111111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+.... . .+..++..+.+++.+||+.+|++|||+.|+++.|+.+.+
T Consensus 234 --------~~~~~-~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 234 --------DGYRL-A------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred --------cCCCC-C------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 00000 0 011234678999999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=294.47 Aligned_cols=250 Identities=22% Similarity=0.270 Sum_probs=200.2
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+....||.|..|.|++++.. +|..+|||.+.... ....+.+.+.++++.... .|.||+++|||.... .++++
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~----dV~Ic 169 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT----DVFIC 169 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc----hHHHH
Confidence 334466999999999999854 68999999997653 445677888888887764 899999999998776 67899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||.|.. .++.++.+.+.++++...-++...+.+||.||.+ +++|+|||+||+|||+|+.|++|+||||++.++.+..
T Consensus 170 MelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk 246 (391)
T KOG0983|consen 170 MELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK 246 (391)
T ss_pred HHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccc
Confidence 999844 7888888888788888888999999999999996 7899999999999999999999999999998886554
Q ss_pred ceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 865 QFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.+ +...|-+.|||||.+.. ..|+.++||||||++++||.||+.||.....+-.. +.++.+.+
T Consensus 247 Ah---trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~------------ltkvln~e 311 (391)
T KOG0983|consen 247 AH---TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV------------LTKVLNEE 311 (391)
T ss_pred cc---ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH------------HHHHHhcC
Confidence 32 44567888999998654 46999999999999999999999999875333221 22333322
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
...-... ..-+..+.+++..|+++|+.+||...++++|
T Consensus 312 PP~L~~~-----~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 312 PPLLPGH-----MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCCcc-----cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 2111110 1134679999999999999999999999987
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=322.40 Aligned_cols=262 Identities=25% Similarity=0.420 Sum_probs=204.7
Q ss_pred CCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.|++.+.||+|+||.||+++. .++..||+|.++... ......+.+|++++++++||||+++++++...+.. .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~--~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN--G 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC--c
Confidence 478889999999999999974 357889999987543 33456789999999999999999999988764211 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++.+....+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccccc
Confidence 57999999999999999766556899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccc----------cccHHHHHHHH
Q 037042 861 TREDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE----------GMTLKHWVNDW 929 (1002)
Q Consensus 861 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~----------~~~~~~~~~~~ 929 (1002)
....... ......++..|+|||+..+..++.++|||||||++|||++++.|....... ......++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR-- 237 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH--
Confidence 5433221 122345677899999988888999999999999999999988775432111 000011100
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
.+.++... ..+..++..+.+++.+||+.+|++||++.++++.++++
T Consensus 238 ------~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 ------VLEEGKRL-------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ------HHHcCccC-------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00011000 01123456799999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=320.91 Aligned_cols=252 Identities=25% Similarity=0.445 Sum_probs=202.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|++.++||+|+||.||+|...++..||+|.+..... ..+.+.+|++++++++|++|+++++++... ..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~lv~ 79 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEE-----PIYIVT 79 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCC-----CcEEEE
Confidence 46888999999999999999988888999999876433 346789999999999999999999987543 347999
Q ss_pred ccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 786 EYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||+++++|.+++.... ..+++.++..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++..+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 9999999999997643 35889999999999999999999 8899999999999999999999999999998765433
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......++..|+|||+..+..++.++|||||||++|||++ |..||..... .+.... +.... .
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~~~~~~--------~~~~~-~ 221 (260)
T cd05070 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-----REVLEQ--------VERGY-R 221 (260)
T ss_pred cc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH--------HHcCC-C
Confidence 21 1123345678999999888889999999999999999999 8889865321 111111 11100 0
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.. .+...+..+.+++.+|+.++|++|||+.++.+.|+.
T Consensus 222 ~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 MP------CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CC------CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00 112345679999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=320.79 Aligned_cols=253 Identities=22% Similarity=0.417 Sum_probs=203.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..++||+|+||.||+|..++++.||+|.+..... ....+.+|++++++++|+||+++++++... ..++|
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~v 78 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQE-----PIYII 78 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEccC-----CcEEE
Confidence 356888999999999999999988899999999875433 346788999999999999999999987433 35799
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999987643 36889999999999999999999 899999999999999999999999999999776532
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......++..|+|||+.....++.++|||||||++|||++ |+.||...... +.... +. +...
T Consensus 156 ~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~-----~~---~~~~ 221 (260)
T cd05067 156 EYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQN-----LE---RGYR 221 (260)
T ss_pred Ccc-cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----HHHHH-----HH---cCCC
Confidence 221 1223446778999999988889999999999999999999 99999753211 11110 00 0000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
. . .+...+.++.+++.+|++.+|++||++++++..|+.
T Consensus 222 ~-~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 M-P------RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred C-C------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0 0 011234579999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=328.52 Aligned_cols=262 Identities=24% Similarity=0.421 Sum_probs=201.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-----------------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCccee
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-----------------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKI 767 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~ 767 (1002)
++|++.+.||+|+||.||+++.. ++..||+|++.... ......+.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46889999999999999998532 23469999987543 3345678999999999999999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHhhhccC----------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCC
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN----------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLK 837 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlk 837 (1002)
++++...+ ..++||||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+|+|||||
T Consensus 85 ~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlk 157 (296)
T cd05095 85 LAVCITSD----PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLA 157 (296)
T ss_pred EEEEecCC----ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCC
Confidence 99998776 5689999999999999987642 13667889999999999999999 8999999999
Q ss_pred CCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh--CCCCCccc
Q 037042 838 PSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT--GKKPTNEI 915 (1002)
Q Consensus 838 p~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~~P~~~~ 915 (1002)
|+||++++++.++|+|||+++.+.............++..|+|||....+.++.++|||||||++|||++ |..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9999999999999999999987654332222223345678999998888889999999999999999998 77887653
Q ss_pred ccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 916 FNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.... ................ ... .+..++..+.+++.+||+.+|++||++.||++.|++
T Consensus 238 ~~~~--~~~~~~~~~~~~~~~~-----~~~------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDEQ--VIENTGEFFRDQGRQV-----YLP------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChHH--HHHHHHHHHhhccccc-----cCC------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 2211 1110111000000000 000 112245678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=319.64 Aligned_cols=247 Identities=25% Similarity=0.397 Sum_probs=196.5
Q ss_pred eeeccCcceEEEEEe---CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 713 LIGRGGFGSVYKARI---QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 713 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
.||+|+||.||+|.+ .+++.||+|+++... ....+.+..|+.+++.++||||+++++++... ..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE-----SWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CcEEEEec
Confidence 589999999999964 357889999986543 23457788999999999999999999988543 34799999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCcee
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV 867 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 867 (1002)
+++|+|.+++...+ .+++..+..++.|++.|++|+| +++|+||||||+||+++.++.+||+|||+++.+.......
T Consensus 77 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 77 AELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 99999999997654 4889999999999999999999 8999999999999999999999999999998765443221
Q ss_pred -eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 868 -TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 868 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
......++..|+|||......++.++|||||||++|||++ |..||...... .+... +......
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~--------i~~~~~~-- 217 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-----EVTQM--------IESGERM-- 217 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH--------HHCCCCC--
Confidence 1122334678999999888889999999999999999998 99998753221 11111 1111000
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
..+..++..+.++|.+||+.+|++||++.+|.+.|+.+
T Consensus 218 -----~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 218 -----ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred -----CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 01123456788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=329.75 Aligned_cols=270 Identities=19% Similarity=0.238 Sum_probs=201.3
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|...+.||+|+||.||+|+.. +++.||+|+++... ......+.+|++++++++||||+++++++...+ ..++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~l 81 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK----SLTL 81 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC----eEEE
Confidence 57899999999999999999855 68899999987543 223446778999999999999999999998766 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++ ++.+++...+..+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 9999975 898888776666889999999999999999999 899999999999999999999999999999765432
Q ss_pred CceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--h-hhhc--
Q 037042 864 DQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--S-IMKI-- 937 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~-~~~i-- 937 (1002)
.. ......+|..|+|||++.+ ..++.++||||+||++|||++|+.||......+. ........... . ...+
T Consensus 158 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 158 TK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred cc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhhcc
Confidence 21 1233467889999998755 4589999999999999999999999976432111 11111000000 0 0000
Q ss_pred ----ccCccCChhh-hHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 ----VDGSLLSRED-IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ----~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+........ .........+..+.+++.+|++.+|++|||+.|+++|-+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 288 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence 0000000000 000011224567889999999999999999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=317.93 Aligned_cols=247 Identities=28% Similarity=0.439 Sum_probs=198.0
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCCC
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPH 790 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~ 790 (1002)
++||+|+||.||+|...++..||+|++..... .....+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ----PIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC----ccEEEEECCCC
Confidence 36899999999999988889999999876533 33456888999999999999999999998766 56899999999
Q ss_pred CChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeec
Q 037042 791 GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870 (1002)
Q Consensus 791 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 870 (1002)
++|.+++......+++..+..++.|++.|+.|+| +++++||||||+||+++.++.+||+|||++........ ....
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~ 152 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSG 152 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceecccccc-ccCC
Confidence 9999999776666889999999999999999999 89999999999999999999999999999875433221 1112
Q ss_pred cCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhH
Q 037042 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949 (1002)
Q Consensus 871 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 949 (1002)
...++..|+|||+...+.++.++|||||||++||+++ |..||....... .... +......
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-----~~~~-----~~~~~~~--------- 213 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-----AREQ-----VEKGYRM--------- 213 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHH-----HHcCCCC---------
Confidence 2234667999999988889999999999999999998 999986532211 0000 1100000
Q ss_pred HHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+..++..+.+++.+|++.+|++||++.|+++.|.
T Consensus 214 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 214 -SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred -CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 001224567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=326.05 Aligned_cols=246 Identities=23% Similarity=0.300 Sum_probs=194.5
Q ss_pred eeccCcceEEEEEeC-CCcEEEEEEeecccc---hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 714 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
||+|+||+||++... +|+.||+|++.+... ...+.+..|++++++++||||+++.+++.... ..++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~ 76 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT----DLCLVMTIMN 76 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC----eEEEEEeCCC
Confidence 699999999999854 689999999875422 23356778999999999999999999887665 5689999999
Q ss_pred CCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 790 HGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 790 ~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
+|+|.+++.. ....+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++..+.....
T Consensus 77 ~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~- 152 (280)
T cd05608 77 GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS- 152 (280)
T ss_pred CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-
Confidence 9999988754 2235889999999999999999999 89999999999999999999999999999976654322
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... ..+.....
T Consensus 153 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~--------~~~~~~~~---- 218 (280)
T cd05608 153 -KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELK--------QRILNDSV---- 218 (280)
T ss_pred -cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHH--------HhhcccCC----
Confidence 12345689999999999999999999999999999999999999975322111 01100 01111100
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRL 985 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L 985 (1002)
..+...+..+.+++.+||+.+|++|| +++++++|-
T Consensus 219 ----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~ 258 (280)
T cd05608 219 ----TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHP 258 (280)
T ss_pred ----CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcCh
Confidence 01123456788999999999999999 788999873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=321.28 Aligned_cols=258 Identities=27% Similarity=0.427 Sum_probs=206.4
Q ss_pred cCCCCCceeeccCcceEEEEEeCC----CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|...+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----- 80 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENP----- 80 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCC-----
Confidence 457888999999999999998543 3469999887654 345678899999999999999999999887543
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeec
Confidence 46999999999999999876656899999999999999999999 899999999999999999999999999999866
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ..+...++..|+|||......++.++|||||||++||+++ |..||........ ..+ +..
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--~~~-----------~~~ 223 (270)
T cd05056 158 EDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV--IGR-----------IEN 223 (270)
T ss_pred ccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHH-----------HHc
Confidence 543221 1223345567999999888889999999999999999996 9999865432111 110 000
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
+... ..+..++..+.+++.+|+..+|++|||+.+++++|+++.+..
T Consensus 224 ~~~~-------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 224 GERL-------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred CCcC-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 0000 012234567999999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=339.58 Aligned_cols=366 Identities=29% Similarity=0.425 Sum_probs=202.2
Q ss_pred CCCCCEEeCCCCccc-ccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchh
Q 037042 125 LPFFESLNLSKNMFH-GGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIF 203 (1002)
Q Consensus 125 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~ 203 (1002)
||..+-.|+++|.|+ +..|..+..+++++.|.|...++. .+|..++.|.+|+.|.+++|+|..
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~--------------- 69 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS--------------- 69 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh---------------
Confidence 445555666666666 345656666666666666666555 555556666666666666655542
Q ss_pred hcccCCcccCCCCccccCccccceeeccCccccc-ccccccccccccceeecccCCCccccCCccccCCCccchhhcccc
Q 037042 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG-VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGN 282 (1002)
Q Consensus 204 ~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N 282 (1002)
+-.++..|+.|+.+++..|++.. -+|..++ ++..|+.||||+|
T Consensus 70 -----------vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF-------------------------~l~dLt~lDLShN 113 (1255)
T KOG0444|consen 70 -----------VHGELSDLPRLRSVIVRDNNLKNSGIPTDIF-------------------------RLKDLTILDLSHN 113 (1255)
T ss_pred -----------hhhhhccchhhHHHhhhccccccCCCCchhc-------------------------ccccceeeecchh
Confidence 22334444555555555554431 1233333 3444555555555
Q ss_pred cccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 283 HFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 283 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
+++ ..|..+...+++..|+||+|+|..++...|-+|+.|-.||||+|++..+|.. ...+.+|++|+||+|.+.
T Consensus 114 qL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ------~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 114 QLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQ------IRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred hhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHH------HHHHhhhhhhhcCCChhh
Confidence 555 5666666677777777777777766666677777777777777777777655 345555666666666543
Q ss_pred CcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccC-ccCCccccCCCCCCEEEccCCcccccCCc
Q 037042 363 GILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN-GSIPITLGKLQKLQVLYFPDNKLEGSIPD 441 (1002)
Q Consensus 363 ~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 441 (1002)
.. --..+-.+++|..|.+++.+=+ ..+|.++..+.+|..+|||.|.+. .+
T Consensus 187 hf--------------------------QLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~v-- 237 (1255)
T KOG0444|consen 187 HF--------------------------QLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IV-- 237 (1255)
T ss_pred HH--------------------------HHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cc--
Confidence 11 0011223445555555554332 234444445555555555555544 44
Q ss_pred cccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccc
Q 037042 442 EVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVL 521 (1002)
Q Consensus 442 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 521 (1002)
|+++-.+++|+.|+||+|+|+.. ....+...+|++|+||.|+++ .+|..+..++.|
T Consensus 238 ----------------------Pecly~l~~LrrLNLS~N~iteL-~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL 293 (1255)
T KOG0444|consen 238 ----------------------PECLYKLRNLRRLNLSGNKITEL-NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKL 293 (1255)
T ss_pred ----------------------hHHHhhhhhhheeccCcCceeee-eccHHHHhhhhhhccccchhc-cchHHHhhhHHH
Confidence 44444444555555555544432 222333445555555555555 355555555555
Q ss_pred eeeeCCCCccC-ccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCC
Q 037042 522 VKIDFSMNNFS-GVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSF 600 (1002)
Q Consensus 522 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1002)
+.|.+.+|+++ .-+|..++.|.+|+.+..++|.+. ..|..++.+..|+.|.|++|+|- .+|+.+.-++.|+.|||..
T Consensus 294 ~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlre 371 (1255)
T KOG0444|consen 294 TKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRE 371 (1255)
T ss_pred HHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccC
Confidence 55555555543 124556666666666666666665 56666666666666666666665 5666666666666666666
Q ss_pred CcCc
Q 037042 601 NKLE 604 (1002)
Q Consensus 601 N~l~ 604 (1002)
|+=-
T Consensus 372 NpnL 375 (1255)
T KOG0444|consen 372 NPNL 375 (1255)
T ss_pred CcCc
Confidence 6543
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=340.34 Aligned_cols=267 Identities=16% Similarity=0.148 Sum_probs=197.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
..+|.+.+.||+|+||.||+|... .++.||||... ...+.+|++++++++|+|||++++++..++ ..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~----~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGG----LTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECC----EEEE
Confidence 457999999999999999999865 58899999632 234568999999999999999999988766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||++. ++|.+++......+++.+++.|+.||++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 999995 6999988766557999999999999999999999 899999999999999999999999999999876443
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccc--cc----cHHHHHHHHHhh--hhh
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE--GM----TLKHWVNDWLLI--SIM 935 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~--~~----~~~~~~~~~~~~--~~~ 935 (1002)
..........||..|+|||++.+..++.++|||||||++|||++|..|+...... .. .+...+...... ...
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 2222223456999999999999999999999999999999999988775432211 00 111111110000 000
Q ss_pred hcccCcc-----------CCh-hhhHHHh-HHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 936 KIVDGSL-----------LSR-EDIQFVA-KEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 936 ~i~~~~~-----------~~~-~~~~~~~-~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
......+ ... .....+. .......+.+++.+||+.||.+|||+.|+++|-
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp 456 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP 456 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence 0000000 000 0000000 001234688999999999999999999999873
|
|
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=320.20 Aligned_cols=256 Identities=25% Similarity=0.463 Sum_probs=203.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CC---cEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DG---MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||.||+|+.. ++ ..||+|.++... ....+.+..|++++++++||||+++.+++...+ .
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 80 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK----P 80 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC----C
Confidence 46788899999999999999864 33 379999987542 334567889999999999999999999997766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||++++++.+||+|||++...
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 68999999999999999876666899999999999999999999 899999999999999999999999999999866
Q ss_pred cCCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 861 TREDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .......+..|+|||+.....++.++|||||||++|||++ |+.||...... ++... +.
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~~~~~--------i~ 224 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----EVMKA--------IN 224 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHHH--------Hh
Confidence 4332211 1122234567999999888889999999999999999998 99998653211 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
... ... ....++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 225 ~~~-~~~------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 225 DGF-RLP------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred cCC-CCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 110 000 1123456789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=333.53 Aligned_cols=242 Identities=26% Similarity=0.304 Sum_probs=189.5
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHH-HHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECE-VMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|+.. +|+.||+|++.+.. ......+..|.. +++.++||||+++++++...+ ..++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~----~~~lv~e 76 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD----KLYFVLD 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC----EEEEEEc
Confidence 46999999999999864 68999999987542 122334445544 567889999999999987766 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 151 (323)
T cd05575 77 YVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK- 151 (323)
T ss_pred CCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC-
Confidence 999999999987654 4888999999999999999999 89999999999999999999999999999875432221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+... .+.......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~--------~i~~~~~~~-- 215 (323)
T cd05575 152 -TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYD--------NILNKPLRL-- 215 (323)
T ss_pred -ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHH--------HHHcCCCCC--
Confidence 22345689999999999998999999999999999999999999975321 11111 111111110
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH----HHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAK----EIVTR 984 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~----evl~~ 984 (1002)
+...+..+.+++.+|++.+|.+||++. |+++|
T Consensus 216 ------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 216 ------KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred ------CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 112345688999999999999999984 66654
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=322.50 Aligned_cols=255 Identities=23% Similarity=0.430 Sum_probs=202.6
Q ss_pred CCCCCceeeccCcceEEEEEeC-CC---cEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DG---MEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
+|+..+.||+|+||.||+|+.. ++ ..||||++... .......+..|+.++++++||||+++++++..+. ..
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----~~ 80 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR----PV 80 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC----ce
Confidence 4778899999999999999854 33 36999998754 2344578899999999999999999999987766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++......+++.+++.++.|++.|++||| +.+++||||||+||+++.++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence 8999999999999999876666899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCCceeeeccCC---CCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 862 REDQFVTQTQTP---ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 862 ~~~~~~~~~~~~---gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
............ .+..|+|||+..+..++.++|||||||++|||++ |..||...... ....++. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~--------~~ 227 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIE--------QD 227 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHH--------cC
Confidence 432211111111 2457999999988899999999999999999886 99998653221 1111110 00
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
... ..+.+++..+.+++.+||..+|++||++.++++.|+++
T Consensus 228 --~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 --YRL--------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --CcC--------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 01123456788999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=321.66 Aligned_cols=244 Identities=22% Similarity=0.309 Sum_probs=190.9
Q ss_pred eeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 714 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
||+|+||.||+++.. +|+.||+|++.... ......+..|++++++++||||+++++++.... ..++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~----~~~lv~e~~~ 76 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT----HLCLVMSLMN 76 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC----eEEEEEecCC
Confidence 699999999999854 69999999986432 122345567999999999999999999987766 6789999999
Q ss_pred CCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceee
Q 037042 790 HGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868 (1002)
Q Consensus 790 ~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 868 (1002)
+|+|.+++.... ..+++..+..++.||+.|++||| +.+|+||||||+||+++.++.++|+|||++........
T Consensus 77 g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~--- 150 (277)
T cd05607 77 GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT--- 150 (277)
T ss_pred CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce---
Confidence 999998886543 25888999999999999999999 89999999999999999999999999999987654322
Q ss_pred eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhh
Q 037042 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDI 948 (1002)
Q Consensus 869 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 948 (1002)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||....... ....... ..........
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~--------~~~~~~~~~~--- 218 (277)
T cd05607 151 ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKR--------RTLEDEVKFE--- 218 (277)
T ss_pred eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHH--------Hhhccccccc---
Confidence 234568899999999988889999999999999999999999987532211 1111111 1111111000
Q ss_pred HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHH
Q 037042 949 QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVT 983 (1002)
Q Consensus 949 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~ 983 (1002)
....+..+.+++.+||+.+|++||+++|+++
T Consensus 219 ----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 219 ----HQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred ----cccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 0123456899999999999999999966553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=335.46 Aligned_cols=242 Identities=24% Similarity=0.320 Sum_probs=193.1
Q ss_pred ceeeccCcceEEEEEe----CCCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 712 NLIGRGGFGSVYKARI----QDGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
+.||+|+||.||+++. .+|+.||+|++.+... .....+..|++++++++||||+++++++...+ ..++||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG----KLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC----EEEEEE
Confidence 6799999999999874 3588999999975432 23455678999999999999999999998766 568999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++|+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 78 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 78 DFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 9999999999987654 4899999999999999999999 89999999999999999999999999999986543321
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
......||..|+|||++.+..++.++|||||||++|||++|+.||...... .... .+......
T Consensus 154 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~~~--------~i~~~~~~-- 216 (318)
T cd05582 154 --KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----ETMT--------MILKAKLG-- 216 (318)
T ss_pred --ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----HHHH--------HHHcCCCC--
Confidence 123456899999999998888999999999999999999999999753211 1111 11111111
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHH
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTR 984 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~ 984 (1002)
.+...+..+.+++.+||+.+|++||++ .++++|
T Consensus 217 ------~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 217 ------MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred ------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 111234568899999999999999994 445544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=328.52 Aligned_cols=264 Identities=26% Similarity=0.423 Sum_probs=206.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCc
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGD 775 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 775 (1002)
++|.+.+.||+|+||.||+|+.. .+..||+|++.... ......+..|+++++++ +||||+++++++...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 56888899999999999999742 24579999987543 33456788899999999 6999999999987665
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCC
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~N 840 (1002)
..++||||+++|+|.+++.... ..+++.++..++.|++.|++||| +++|+||||||+|
T Consensus 92 ----~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~N 164 (314)
T cd05099 92 ----PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARN 164 (314)
T ss_pred ----ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecccccee
Confidence 5689999999999999986532 24788899999999999999999 8999999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCccccccc
Q 037042 841 VLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEG 919 (1002)
Q Consensus 841 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~ 919 (1002)
|+++.++.+||+|||+++...............++..|||||++.+..++.++|||||||++|||++ |..||.....
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-- 242 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-- 242 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999987654322211122234567999999888889999999999999999999 8888865321
Q ss_pred ccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 920 MTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
...... +...... ..+..++..+.+++.+||+.+|++||++.|+++.|+++......++
T Consensus 243 ---~~~~~~--------~~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 301 (314)
T cd05099 243 ---EELFKL--------LREGHRM-------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEY 301 (314)
T ss_pred ---HHHHHH--------HHcCCCC-------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCCc
Confidence 111111 0011000 0112344578899999999999999999999999999986554443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=325.78 Aligned_cols=257 Identities=28% Similarity=0.480 Sum_probs=200.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCc--EEEEEEeecc-cchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGM--EVAVKVFNQQ-CGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|++.+.||+|+||.||+|... ++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++...+ .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----~ 77 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG----Y 77 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC----c
Confidence 46888899999999999999864 343 4788887743 233456788999999999 7999999999987765 5
Q ss_pred HHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC
Q 037042 781 KALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~ 845 (1002)
.++|+||+++|+|.+++.... ..+++..+..++.|++.|++||| +++|+||||||+||++++
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~ 154 (297)
T cd05089 78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGE 154 (297)
T ss_pred ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECC
Confidence 689999999999999996532 24788899999999999999999 899999999999999999
Q ss_pred CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHH
Q 037042 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~ 924 (1002)
++.+||+|||++....... .......+..|+|||+.....++.++|||||||++|||++ |..||...... .
T Consensus 155 ~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-----~ 226 (297)
T cd05089 155 NLASKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-----E 226 (297)
T ss_pred CCeEEECCcCCCcccccee---ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 9999999999986432111 1112223557999999888889999999999999999997 99998653221 1
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.... +..+... . .+..++..+.+++.+||+.+|.+||++++++++|+.+....
T Consensus 227 ~~~~--------~~~~~~~-~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 227 LYEK--------LPQGYRM-E------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HHHH--------HhcCCCC-C------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111 1100000 0 11224567889999999999999999999999998887543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=320.08 Aligned_cols=248 Identities=33% Similarity=0.558 Sum_probs=203.2
Q ss_pred ceeeccCcceEEEEEeCC----CcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQD----GMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||.||+|.... +..||+|++...... ..+.+.+|+++++.++|+||+++++++.... ..++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv~e 76 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE----PLYLVLE 76 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCC----ceEEEEE
Confidence 468999999999998653 788999999765433 3678899999999999999999999988755 6789999
Q ss_pred cCCCCChhHhhhcc--------CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 787 YMPHGSLEKYLYSS--------NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
|+++++|.+++... ...+++..+..++.|+++|++||| +++|+||||||+||++++++.+||+|||.+.
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~ 153 (262)
T cd00192 77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSR 153 (262)
T ss_pred eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccc
Confidence 99999999999876 356899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
...............++..|+|||......++.++||||+||++|||++ |..||..... .+.... +
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~--------~ 220 (262)
T cd00192 154 DVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-----EEVLEY--------L 220 (262)
T ss_pred ccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH--------H
Confidence 7765433233345567889999999888889999999999999999999 6999876421 111111 1
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.++... ..+..++..+.+++.+||..+|++|||+.|++++|+
T Consensus 221 ~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 221 RKGYRL-------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HcCCCC-------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111000 112234577999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=320.22 Aligned_cols=239 Identities=20% Similarity=0.326 Sum_probs=188.4
Q ss_pred ceeeccCcceEEEEEeCC-------------CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 712 NLIGRGGFGSVYKARIQD-------------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
+.||+|+||.||+|++.+ ...||+|++..........+..|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~--- 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV--- 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 368999999999997532 2358999887655555667888999999999999999999988765
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc-------EEE
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV-------AHL 851 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~-------~kl 851 (1002)
..++||||+++|+|..++......+++..+.+++.||++|++||| +++|+||||||+||+++.++. +|+
T Consensus 78 -~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 78 -ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred -CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 557999999999999998776666899999999999999999999 899999999999999987654 899
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccC-CCCcCcccchHHHHHHHHHHH-hCCCCCcccccccccHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGS-EGRVSTNGDVYNFGVMLMETF-TGKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~ell-tg~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
+|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|+.||....... ..
T Consensus 154 ~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-----~~--- 219 (262)
T cd05077 154 SDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE-----KE--- 219 (262)
T ss_pred CCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH-----HH---
Confidence 999998755322 2345778899999876 466899999999999999998 5888876432110 00
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.......... ......+.+++.+||+.+|++||++.++++++
T Consensus 220 ------~~~~~~~~~~--------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 220 ------RFYEGQCMLV--------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ------HHHhcCccCC--------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0000000000 01134688999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=324.82 Aligned_cols=256 Identities=29% Similarity=0.495 Sum_probs=203.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|+..+.||+|+||.||+|+.. ++..||+|++.... ......+.+|+.++++++||||+++++++..++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~-- 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK-- 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--
Confidence 457889999999999999999753 46789999987543 234567889999999999999999999988766
Q ss_pred hHHHHHhhccCCCCChhHhhhccC---------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccC
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN---------------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDL 836 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~---------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDl 836 (1002)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| .++++||||
T Consensus 82 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl 156 (288)
T cd05050 82 --PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDL 156 (288)
T ss_pred --ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccc
Confidence 5689999999999999997432 13678888999999999999999 899999999
Q ss_pred CCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCccc
Q 037042 837 KPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEI 915 (1002)
Q Consensus 837 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~ 915 (1002)
||+||++++++.+||+|||++.................+..|+|||...+..++.++|||||||++|||++ |..||...
T Consensus 157 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 157 ATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred cHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999876544332222223345677999999888889999999999999999998 88888643
Q ss_pred ccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 916 FNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
... ++.. .+.+..... .+..++..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 237 ~~~-----~~~~--------~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 AHE-----EVIY--------YVRDGNVLS-------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CHH-----HHHH--------HHhcCCCCC-------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 221 1111 111111110 112245678999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=320.38 Aligned_cols=256 Identities=25% Similarity=0.453 Sum_probs=203.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.+|++.+.||+|+||.||+|+.. .+..||+|.++... ....+.+..|+.++++++||||+++++++..++ .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 79 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK----P 79 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----c
Confidence 46888899999999999999753 23479999987543 334567889999999999999999999987766 6
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||++..+
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 68999999999999999876666899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 861 TREDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......++..|+|||++.+..++.++|||||||++||+++ |..||......+ ... .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~-----------~~~ 223 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIK-----------AIE 223 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHH-----------HHh
Confidence 5432211 1122234567999999988889999999999999999887 999986532211 111 111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
+.... . .+..++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 224 ~~~~~-~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 224 EGYRL-P------APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCcC-C------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11000 0 0112356788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=318.54 Aligned_cols=252 Identities=24% Similarity=0.431 Sum_probs=201.8
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..+.||+|+||.||+|....+..||+|++.... ...+.+.+|++++++++|||++++++++... ..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEE-----PIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----CcEEEE
Confidence 4688889999999999999998777789999886543 2346788899999999999999999987533 357999
Q ss_pred ccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 786 EYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||+++|+|.++++... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999999997643 35789999999999999999999 8999999999999999999999999999997664432
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......++..|+|||+..+..++.++|||||||++|||++ |+.||....... ...+ +......
T Consensus 157 ~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~-----------~~~~~~~ 222 (260)
T cd05069 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQ-----------VERGYRM 222 (260)
T ss_pred cc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH-----------HHcCCCC
Confidence 21 1223446778999999888889999999999999999999 899987532211 1111 0000000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
..+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus 223 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0112345678999999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=318.13 Aligned_cols=259 Identities=22% Similarity=0.307 Sum_probs=207.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+||+++++++...+ ..
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~----~~ 77 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN----EL 77 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC----eE
Confidence 57888999999999999999865 7999999988642 2233567889999999999999999999998765 56
Q ss_pred HHhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
++||||+++|+|.+++... +..+++.++..++.++++|++||| +.+|+||||||+||+++.++.++|+|||++.
T Consensus 78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceee
Confidence 8999999999999988642 235789999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......++..|+|||...+..++.++|||||||++|||++|+.||.... .....+.....
T Consensus 155 ~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~-------- 221 (267)
T cd08224 155 FFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIE-------- 221 (267)
T ss_pred eccCCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhh--------
Confidence 6543221 1123457888999999888889999999999999999999999986532 11222111100
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..... . ......+..+.+++.+||..+|++||++.++++.|+++++
T Consensus 222 ~~~~~-~-----~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~~ 267 (267)
T cd08224 222 KCDYP-P-----LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMHA 267 (267)
T ss_pred cCCCC-C-----CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhcC
Confidence 00000 0 0112345678999999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=339.61 Aligned_cols=259 Identities=22% Similarity=0.244 Sum_probs=200.2
Q ss_pred HHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 701 LCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 701 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
.....++|++.+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|+.+++.++||||+++++++..+.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~- 116 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR- 116 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-
Confidence 3344578999999999999999999865 68899999986432 223455778999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++||||+++|+|.+++... .++...+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 117 ---~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 117 ---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred ---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 678999999999999998654 3788888999999999999999 99999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCC----CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEG----RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
++....... .......||+.|||||++.+. .++.++||||+||++|||++|+.||...... ..
T Consensus 189 a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-----~~------- 255 (371)
T cd05622 189 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GT------- 255 (371)
T ss_pred eeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH-----HH-------
Confidence 987653322 122345799999999987653 3789999999999999999999999753211 11
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCC--CCCHHHHHHHHH
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEK--RINAKEIVTRLL 986 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~evl~~L~ 986 (1002)
..++........ .......+..+.+++.+|+...+.+ |+++.|+++|.+
T Consensus 256 -~~~i~~~~~~~~----~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 256 -YSKIMNHKNSLT----FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred -HHHHHcCCCccc----CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 111111100000 0011124566889999999844443 789999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=325.91 Aligned_cols=259 Identities=25% Similarity=0.447 Sum_probs=204.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCc----EEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGM----EVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|+..+.||+|+||.||+|++. +|+ .||+|++..... .....+.+|+.++++++||||+++++++....
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~---- 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT---- 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC----
Confidence 46788899999999999999753 444 578898865432 33456888999999999999999999986543
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++++||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 83 -~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 83 -IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred -ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEcccccccc
Confidence 35899999999999999877666889999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
..............++..|+|||+..+..++.++|||||||++|||++ |+.||...... ....++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~~~----------- 225 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDLLE----------- 225 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH-----------
Confidence 654332222233445778999999988889999999999999999997 89998653211 1111111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
...... .+..++..+.+++.+||..+|++||+++++++.++++....
T Consensus 226 ~~~~~~-------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 226 KGERLP-------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred CCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 000000 01123456889999999999999999999999999886543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=320.62 Aligned_cols=258 Identities=23% Similarity=0.311 Sum_probs=205.9
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||.||+|+. .+++.||||.+... .......+.+|+++++.++||||+++++++...+ ..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~ 77 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN----EL 77 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC----eE
Confidence 4688889999999999999985 57999999987643 2234467889999999999999999999988766 56
Q ss_pred HHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
++||||+++++|.+++.. ....+++..+..++.||++|++||| +.+++|+||||+||+++.++.++|+|||++.
T Consensus 78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 78 NIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 799999999999998864 2335889999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......++..|+|||+..+..++.++||||||+++|||++|..||.....+ ...+... +....
T Consensus 155 ~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~-----~~~~~ 224 (267)
T cd08229 155 FFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKK-----IEQCD 224 (267)
T ss_pred ccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhh-----hhcCC
Confidence 6643321 123346888999999998888999999999999999999999998643221 1111110 11111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.+.. .+...+..+.+++.+||..+|++|||+.+|++.++++.
T Consensus 225 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 225 YPPL---------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCC---------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0100 11234567999999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=335.98 Aligned_cols=273 Identities=19% Similarity=0.223 Sum_probs=199.3
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-HHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA-LFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~~~ 782 (1002)
+|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+... ...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999985 479999999986532 234467889999999999999999999987654211 1457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|+||+. ++|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9999996 58888876544 5899999999999999999999 89999999999999999999999999999986543
Q ss_pred CCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh----------
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL---------- 931 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~---------- 931 (1002)
... .......+|..|+|||++.+. .++.++||||+||++|||++|+.||....... .+.........
T Consensus 156 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 156 DES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred Ccc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhh
Confidence 221 122345678899999988764 47999999999999999999999997642211 01110000000
Q ss_pred hhhhhcccCccCChhhhHH--HhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 ISIMKIVDGSLLSREDIQF--VAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
......+............ .........+.+++.+|++.||++|||+.|+++|-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 0000000000000000000 011123467889999999999999999999998854
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=330.30 Aligned_cols=247 Identities=20% Similarity=0.266 Sum_probs=194.4
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 781 (1002)
+|+..+.||+|+||+||+|+.. +|+.||+|++.+.. ....+.+..|.++++.+. |++|+++++++...+ ..
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~ 76 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD----RL 76 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC----EE
Confidence 3677899999999999999854 68999999987542 233456777888888885 577888998887766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 77 ~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~ 152 (323)
T cd05615 77 YFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 152 (323)
T ss_pred EEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccC
Confidence 89999999999999987654 4889999999999999999999 8999999999999999999999999999987543
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+....
T Consensus 153 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~--------~i~~~~ 217 (323)
T cd05615 153 VDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-----ELFQ--------SIMEHN 217 (323)
T ss_pred CCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHhCC
Confidence 2221 123456899999999998888999999999999999999999999764221 1111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~ 984 (1002)
... +...+..+.+++.+|++.+|.+|++. .++.+|
T Consensus 218 ~~~--------p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 218 VSY--------PKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred CCC--------CccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 110 11234567899999999999999984 556555
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=340.07 Aligned_cols=268 Identities=19% Similarity=0.151 Sum_probs=200.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC---CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
..+|.+.+.||+|+||.||++... .++.||+|.+... ....+|++++++++||||+++++++.... ..
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~----~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKS----TV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCC----EE
Confidence 357999999999999999999743 3678999987643 23467999999999999999999887665 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++|||++. ++|.+++... ..+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++...
T Consensus 162 ~lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred EEEehhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 79999995 5888888443 45899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc--ccHHHHHHHHHhhh------
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG--MTLKHWVNDWLLIS------ 933 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~------ 933 (1002)
............||..|+|||++.+..|+.++|||||||++|||++|+.||....... ..+...+.......
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 316 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN 316 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence 5433323345679999999999999999999999999999999999999986643221 11111111100000
Q ss_pred --------hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 --------IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 --------~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+.......................+.+++.+|+..+|++|||+.|++.|-.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 00000000000000000001112356788999999999999999999999854
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=318.67 Aligned_cols=253 Identities=25% Similarity=0.331 Sum_probs=202.0
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|+..+.||+|+||.||+|.. .++++||+|++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE---- 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC----
Confidence 4688999999999999999985 468999999986432 123457888999999999999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|+||+++++|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||+++.
T Consensus 78 ~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~ 153 (263)
T cd06625 78 TLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 153 (263)
T ss_pred eEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 6789999999999999987654 4788889999999999999999 89999999999999999999999999999976
Q ss_pred ccCCCceee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
......... .....++..|+|||+..+..++.++||||+||++|||++|+.||...... ... ..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~---------~~~~ 220 (263)
T cd06625 154 LQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAI---------FKIA 220 (263)
T ss_pred ccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHH---------HHHh
Confidence 543221111 12345778899999999888999999999999999999999998653211 000 0000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...... ..+..+...+.+++.+||..+|++|||+.|+++|.
T Consensus 221 ~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 221 TQPTNP------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred ccCCCC------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 000000 01123456788999999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=315.98 Aligned_cols=248 Identities=31% Similarity=0.483 Sum_probs=198.9
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCCC
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPH 790 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~ 790 (1002)
++||+|+||.||+|...+++.||+|++...... ....+..|++++++++||||+++++++.... ..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ----PIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC----CeEEEEEcCCC
Confidence 468999999999998766999999998765433 5577899999999999999999999988766 56899999999
Q ss_pred CChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeec
Q 037042 791 GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870 (1002)
Q Consensus 791 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 870 (1002)
++|.+++......+++..+..++.+++.|++||| +++++||||||+||+++.++.+||+|||++.............
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 9999999776556889999999999999999999 8999999999999999999999999999997654322111112
Q ss_pred cCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhH
Q 037042 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949 (1002)
Q Consensus 871 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 949 (1002)
...++..|+|||...++.++.++|||||||++|||++ |..||....... .... +.... ..
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--~~~~--------~~~~~--~~------- 214 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--TRER--------IESGY--RM------- 214 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--HHHH--------HhcCC--CC-------
Confidence 2234567999999888889999999999999999999 888886532211 1110 00000 00
Q ss_pred HHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+..++..+.+++.+|++.+|++|||+.|+++.|+
T Consensus 215 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 215 -PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -CCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 011234567999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-37 Score=329.85 Aligned_cols=254 Identities=22% Similarity=0.334 Sum_probs=205.4
Q ss_pred cCCCCCceeeccCcceEEEEEeCC-CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.|.++..||.|+||.||+|..++ +-..|.|++....+...+++.-||+|+..++||+||++++.|...+ ..+++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en----kLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN----KLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC----ceEEE
Confidence 346677789999999999998654 5556788888777777889999999999999999999998776555 56789
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
.|||.||-++..+-.-+..+.+.++..+++|++.||.||| ++.|||||+|+.|||++-+|.++++|||.+.......
T Consensus 108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~ 184 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR 184 (1187)
T ss_pred EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHH
Confidence 9999999999988777778999999999999999999999 9999999999999999999999999999886443221
Q ss_pred ceeeeccCCCCccccccccc-----CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 865 QFVTQTQTPATIGYMALEYG-----SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
.....+.||++|||||+. ...+|+.++||||||+++.||..+.+|..+..+... +.+|..
T Consensus 185 --qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV-------------llKiaK 249 (1187)
T KOG0579|consen 185 --QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-------------LLKIAK 249 (1187)
T ss_pred --hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH-------------HHHHhh
Confidence 123467899999999974 456899999999999999999999999776432211 122222
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..... ...|..-...|.|++.+|+..+|+.||+++++++|-+
T Consensus 250 SePPT-----LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpf 291 (1187)
T KOG0579|consen 250 SEPPT-----LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPF 291 (1187)
T ss_pred cCCCc-----ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence 11111 1122233567999999999999999999999998843
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=321.38 Aligned_cols=273 Identities=24% Similarity=0.391 Sum_probs=208.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-----CCcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-----DGMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
+.|+..+.||+|+||.||+|++. +++.||||++...... ....+..|++++++++||||+++++++...+. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~--~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGG--R 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCC--C
Confidence 35777899999999999999853 3688999999765443 56789999999999999999999998866321 1
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||.+..
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 567999999999999999877656899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH-HHHHhhhhhhc
Q 037042 860 LTREDQFVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV-NDWLLISIMKI 937 (1002)
Q Consensus 860 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~-~~~~~~~~~~i 937 (1002)
......... .....++..|+|||......++.++||||||+++|||++|+.|+.............. .......+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence 763322211 1223456679999998888899999999999999999999999865432211000000 00000001111
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
....... ..+..++..+.+++.+||+.+|++|||+.|++++|+++.
T Consensus 239 ~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 239 LKEGERL------PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHcCCcC------CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 1111000 011234567999999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=341.02 Aligned_cols=254 Identities=21% Similarity=0.282 Sum_probs=197.0
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||+||+|+.. +++.||+|++++.. ......+..|++++.+++||+|+++++++...+ ..
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~----~~ 76 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR----NL 76 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----EE
Confidence 36888999999999999999854 68999999997532 234567788999999999999999999988766 67
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 77 YLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred EEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence 89999999999999997654 4889999999999999999999 9999999999999999999999999999987553
Q ss_pred CCCce---------------------------------eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhC
Q 037042 862 REDQF---------------------------------VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTG 908 (1002)
Q Consensus 862 ~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg 908 (1002)
..... .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG 232 (360)
T cd05627 153 KAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (360)
T ss_pred cccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence 21100 001134689999999999999999999999999999999999
Q ss_pred CCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC---HHHHHHHH
Q 037042 909 KKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN---AKEIVTRL 985 (1002)
Q Consensus 909 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt---~~evl~~L 985 (1002)
+.||...... ..... +... ......+. .......+.+++.+|+. +|.+|++ +.|+++|-
T Consensus 233 ~~Pf~~~~~~-----~~~~~-----i~~~-~~~~~~p~------~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp 294 (360)
T cd05627 233 YPPFCSETPQ-----ETYRK-----VMNW-KETLVFPP------EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHP 294 (360)
T ss_pred CCCCCCCCHH-----HHHHH-----HHcC-CCceecCC------CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCC
Confidence 9999763221 11110 0000 00000000 00123557778888764 9999984 78888773
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=325.32 Aligned_cols=250 Identities=26% Similarity=0.334 Sum_probs=202.7
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+|+..+.||+|+||.||+|.. .+++.||+|.+..........+.+|+.+++.++||||+++++++..+. ..++|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~----~~~lv 95 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD----ELWVV 95 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC----EEEEe
Confidence 4788899999999999999985 468999999987665555677889999999999999999999988765 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++... .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 96 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred ecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 9999999999998653 4788999999999999999999 8999999999999999999999999999987654332
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......+++.|+|||...+..++.++|||||||++|||++|+.||........ +... ........
T Consensus 171 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~----~~~~--------~~~~~~~~ 236 (296)
T cd06654 171 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----LYLI--------ATNGTPEL 236 (296)
T ss_pred c--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh----HHHH--------hcCCCCCC
Confidence 1 12334688899999998888899999999999999999999999975432111 1000 00000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..+......+.+++.+||.++|++||++.|++++
T Consensus 237 ------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 ------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred ------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0112344568899999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=332.52 Aligned_cols=269 Identities=21% Similarity=0.196 Sum_probs=199.2
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--h
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--A 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~ 778 (1002)
..++|+..+.||+|+||.||+|+.. +|+.||||++... .......+.+|+.+++.++||||+++++++...... .
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999854 6899999998653 233456778899999999999999999988654321 1
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++||||+++ ++.+.+.. .++...+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 135799999976 66666543 3788888999999999999999 8999999999999999999999999999997
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh-------
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL------- 931 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------- 931 (1002)
...... ......||..|+|||++.+..++.++||||+||++|||++|+.||...... ..|......
T Consensus 172 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~----~~~~~~~~~~~~~~~~ 244 (359)
T cd07876 172 TACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI----DQWNKVIEQLGTPSAE 244 (359)
T ss_pred ccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCcHH
Confidence 643321 123456889999999999989999999999999999999999999754221 111110000
Q ss_pred ------hhhhhccc--CccCChhhhH----------HHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 ------ISIMKIVD--GSLLSREDIQ----------FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 ------~~~~~i~~--~~~~~~~~~~----------~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
........ +......... ..........+.+++.+|+..||++|||+.|+++|-+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000000 0000000000 0001122456889999999999999999999999865
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=331.44 Aligned_cols=256 Identities=20% Similarity=0.214 Sum_probs=196.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+++.. +++.||+|++.+.. ....+.+.+|+.+++.++|+||+++++++..++ ..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~ 76 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN----NL 76 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC----eE
Confidence 46889999999999999999854 68999999997531 223456788999999999999999999998776 67
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++.+....+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||++....
T Consensus 77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 77 YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 8999999999999999875556899999999999999999999 9999999999999999999999999999997665
Q ss_pred CCCceeeeccCCCCcccccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE-----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
..... ......||+.|||||++.. ..++.++||||+||++|||++|+.||..... .+..... ..
T Consensus 154 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~-----~~~~~~i-----~~ 222 (331)
T cd05597 154 ADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKI-----MN 222 (331)
T ss_pred CCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH-----HHHHHHH-----Hc
Confidence 43221 1123468999999998763 4578899999999999999999999965321 1111110 00
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCC--CCCCCHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESP--EKRINAKEIVTRL 985 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P--~~Rpt~~evl~~L 985 (1002)
.. ....... .....+..+.+++.+|+...+ ..||++.++++|-
T Consensus 223 ~~-~~~~~~~-----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp 267 (331)
T cd05597 223 HK-EHFQFPP-----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHP 267 (331)
T ss_pred CC-CcccCCC-----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence 00 0000000 001134567788888775533 3488999999984
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=316.78 Aligned_cols=249 Identities=23% Similarity=0.319 Sum_probs=202.4
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+|+.. +++.||+|.+... .......+..|++++++++||||+++++++...+ ..++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~l 76 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG----KLNI 76 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC----EEEE
Confidence 4777899999999999999864 6899999998643 2345677889999999999999999999988765 5689
Q ss_pred hhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+++++|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 77 VMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred EEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence 99999999999999775 346889999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.... .....|+..|+|||+..+..++.++|||||||++|||++|+.||...... .... .+.....
T Consensus 154 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~--------~~~~~~~ 218 (256)
T cd08529 154 NTNF--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-----ALIL--------KIIRGVF 218 (256)
T ss_pred ccch--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHcCCC
Confidence 3321 12345788999999998888999999999999999999999999754211 0000 1111110
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.. .+...+..+.+++.+||+.+|++||++.+++++
T Consensus 219 ~~-------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 219 PP-------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CC-------CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 00 011244678999999999999999999999976
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=320.41 Aligned_cols=256 Identities=25% Similarity=0.431 Sum_probs=202.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|+..+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-- 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ-- 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--
Confidence 356888899999999999999754 24689999986543 234567888999999999999999999988765
Q ss_pred hHHHHHhhccCCCCChhHhhhccC---------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV 848 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~ 848 (1002)
..++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.
T Consensus 83 --~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~ 157 (277)
T cd05032 83 --PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLT 157 (277)
T ss_pred --CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCC
Confidence 6789999999999999986532 13678889999999999999999 899999999999999999999
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~ 927 (1002)
+||+|||+++.....+.........++..|+|||...++.++.++|||||||++||+++ |..||...... ....
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-----~~~~ 232 (277)
T cd05032 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-----EVLK 232 (277)
T ss_pred EEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-----HHHH
Confidence 99999999987654432222233456788999999888889999999999999999998 99998643221 1111
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
. +.+..... .+..++..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 233 ~--------~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 233 F--------VIDGGHLD-------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred H--------HhcCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 1 00111000 112235678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=321.77 Aligned_cols=238 Identities=21% Similarity=0.330 Sum_probs=187.1
Q ss_pred eeeccCcceEEEEEeCC-------------------------CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCccee
Q 037042 713 LIGRGGFGSVYKARIQD-------------------------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767 (1002)
Q Consensus 713 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 767 (1002)
.||+|+||.||+|.... ...||+|++..........+.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 13589999876554555678889999999999999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
++++.... ..++||||+++|+|.+++...+..+++..+..++.||++||+||| +++|+||||||+||++++.+
T Consensus 82 ~~~~~~~~----~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 82 HGVCVRGS----ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEeCC----ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccC
Confidence 99998776 668999999999999999776667899999999999999999999 89999999999999997543
Q ss_pred -------cEEEecccccccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHH-hCCCCCcccccc
Q 037042 848 -------VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETF-TGKKPTNEIFNE 918 (1002)
Q Consensus 848 -------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~ell-tg~~P~~~~~~~ 918 (1002)
.+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||......
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred cccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 4899999988654322 12346778999998765 56899999999999999985 699998653221
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.. ..+. ...... +......+.+++.+||+.+|++||++.+++++|
T Consensus 229 ~~--~~~~------------~~~~~~--------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 229 EK--ERFY------------EKKHRL--------PEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HH--HHHH------------HhccCC--------CCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 11 1110 000000 011124588999999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=318.30 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=189.9
Q ss_pred ceeeccCcceEEEEEeCC---CcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 712 NLIGRGGFGSVYKARIQD---GMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
+.||+|+||.||+|.+.+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.... ..++||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~ 76 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT----PYLLVMEF 76 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC----CcEEEEEC
Confidence 358999999999997543 45799998875432 23457888999999999999999999987665 56899999
Q ss_pred CCCCChhHhhhccC----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 788 MPHGSLEKYLYSSN----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+++|+|.++++... ...++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++.....
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCc
Confidence 99999999997532 24567778889999999999999 899999999999999999999999999999765443
Q ss_pred CceeeeccCCCCcccccccccCCC-------CcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-------RVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
..........++..|+|||+..+. .++.++|||||||++|||++ |+.||........ ..+ .......
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~---~~~~~~~ 228 (269)
T cd05087 154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTY---TVREQQL 228 (269)
T ss_pred ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHH---HhhcccC
Confidence 322222344578889999987532 35789999999999999996 9999965432211 000 0001111
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+.++... ......+.+++.+|| .+|++|||++||.+.|+
T Consensus 229 ~~~~~~~~----------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLK----------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccC----------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11111110 112345788999999 58999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=327.17 Aligned_cols=197 Identities=21% Similarity=0.277 Sum_probs=159.7
Q ss_pred CceeeccCcceEEEEEeC---CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 711 NNLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
.++||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++...... ..++||||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADR--KVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCc--EEEEEEec
Confidence 468999999999999854 46789999986542 234567899999999999999999988653321 45789999
Q ss_pred CCCCChhHhhhccC--------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee----CCCCcEEEeccc
Q 037042 788 MPHGSLEKYLYSSN--------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAHLSDFG 855 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~--------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfG 855 (1002)
+.+ +|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 82 AEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred cCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 865 8888765321 24788889999999999999999 8999999999999999 466899999999
Q ss_pred ccccccCCCce-eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCccc
Q 037042 856 ITKLLTREDQF-VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEI 915 (1002)
Q Consensus 856 la~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~ 915 (1002)
+++........ .......||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99876543221 12234578999999998876 45899999999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=331.16 Aligned_cols=238 Identities=25% Similarity=0.293 Sum_probs=185.8
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHH-HHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVEC-EVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|+.. +++.||+|++.+.. ......+..|. .+++.++||||+++++++...+ ..++|||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~----~~~lv~e 76 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD----KLYFVLD 76 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC----eEEEEEe
Confidence 46999999999999865 67889999987532 11223344444 4567889999999999988776 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+....+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~- 151 (325)
T cd05602 77 YINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG- 151 (325)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-
Confidence 999999999997654 4778888899999999999999 89999999999999999999999999999975432221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... +.... +......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~--------i~~~~~~--- 214 (325)
T cd05602 152 -TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EMYDN--------ILNKPLQ--- 214 (325)
T ss_pred -CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-----HHHHH--------HHhCCcC---
Confidence 223456899999999999989999999999999999999999999753221 11111 1111000
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKE 980 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~e 980 (1002)
.+...+..+.+++.+|++.+|.+||++.+
T Consensus 215 -----~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 215 -----LKPNITNSARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred -----CCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 01123456889999999999999998874
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=319.47 Aligned_cols=254 Identities=26% Similarity=0.374 Sum_probs=200.1
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+++.+.....||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++|+||+++++++..++ ..+
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~ 81 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG----FFK 81 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC----EEE
Confidence 4455666678999999999999854 68889999987766666778999999999999999999999988776 567
Q ss_pred HhhccCCCCChhHhhhccCCcC--CHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYIL--DIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l--~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~ 859 (1002)
+|+||+++++|.+++......+ ++..+..++.||++|++||| +++|+||||||+||+++. ++.+||+|||++..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999998654445 78888899999999999999 899999999999999976 67999999999876
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCC--cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGR--VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
...... ......++..|+|||+..... ++.++|||||||++|||++|+.||........ ..+.. ....
T Consensus 159 ~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~-----~~~~- 228 (268)
T cd06624 159 LAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKV-----GMFK- 228 (268)
T ss_pred cccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhh-----hhhc-
Confidence 543221 122345788999999876543 78999999999999999999999865322111 00000 0000
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. ....+......+.+++.+||+.+|++|||+.|+++|
T Consensus 229 ---~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 ---I-------HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ---c-------CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0 000122345678899999999999999999999986
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=328.20 Aligned_cols=248 Identities=20% Similarity=0.280 Sum_probs=194.0
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+..|+.++.++ +||+|+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e 76 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS----RLFLVIE 76 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC----EEEEEEe
Confidence 46999999999999854 68899999998642 23345678899999888 6999999999988766 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..++.||+.|++||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 151 (327)
T cd05617 77 YVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD- 151 (327)
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-
Confidence 999999999887654 4899999999999999999999 89999999999999999999999999999875332221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccc-cccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE-GMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+..... ......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~-------~~~~~~-- 221 (327)
T cd05617 152 -TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI-------LEKPIR-- 221 (327)
T ss_pred -ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH-------HhCCCC--
Confidence 123456899999999999999999999999999999999999999653221 111111111110 000000
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH------HHHHHH
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINA------KEIVTR 984 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~------~evl~~ 984 (1002)
.+...+..+.+++.+|++.||++|+++ .++.+|
T Consensus 222 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 222 ------IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred ------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 111234567899999999999999985 577666
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=316.73 Aligned_cols=249 Identities=30% Similarity=0.431 Sum_probs=199.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..+.||+|+||.||+|... |..||+|.+.... ..+.+.+|+.++++++|+|++++++++...+. ..++|+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC---ceEEEE
Confidence 46888899999999999999765 7889999986542 34678899999999999999999997654331 457999
Q ss_pred ccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 786 EYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||+++++|.+++...+. .+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 99999999999876543 5789999999999999999999 8999999999999999999999999999987654322
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
....++..|+|||+..+..++.++|||||||++|||++ |+.||.... ....... +.+-...
T Consensus 157 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~-----~~~~~~~--- 218 (256)
T cd05082 157 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPR-----VEKGYKM--- 218 (256)
T ss_pred -----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHH-----HhcCCCC---
Confidence 12334567999999988889999999999999999998 999986421 1111111 0000000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
..+..++..+.+++.+||+.+|++|||+.+++++|+++
T Consensus 219 -------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 219 -------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 01123456789999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=316.13 Aligned_cols=250 Identities=31% Similarity=0.508 Sum_probs=203.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||.||+|... |+.||+|.+..... ..+.+.+|+.++++++|+||+++++++...+ ..++|
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v 78 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN----PLYIV 78 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC----CeEEE
Confidence 356888899999999999999875 78999999976543 4677889999999999999999999987655 56899
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++++|.+++..... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 999999999999976542 5899999999999999999999 899999999999999999999999999999876332
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
. .....+..|+|||+...+.++.++||||||+++|||++ |+.||...... ..... ..+ . .
T Consensus 156 ~-----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~-----~~~---~-~ 216 (256)
T cd05039 156 Q-----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPH-----VEK---G-Y 216 (256)
T ss_pred c-----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHH-----Hhc---C-C
Confidence 2 12234567999999888889999999999999999997 99998653211 10000 000 0 0
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
... .+..++..+.+++.+||..+|++||++.|++++|+.+
T Consensus 217 ~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 217 RME------APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCC------CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 000 0122456789999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=316.86 Aligned_cols=250 Identities=26% Similarity=0.338 Sum_probs=204.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
++|+..+.||+|+||.||+|+.. +++.||+|.+..... .+.+.+|++++++++||||+++++++.... ..+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNT----DLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCC----cEEEE
Confidence 57888999999999999999876 488999999875432 678999999999999999999999998775 67899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
+||+++++|.+++...+..+++..+..++.|+++|++||| ..+|+||||+|+||+++.++.+||+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 9999999999999876667899999999999999999999 8899999999999999999999999999998765432
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......++..|+|||+..+..++.++|||||||++|||++|+.||......... ..+......
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~-------------~~~~~~~~~- 217 (256)
T cd06612 154 A--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI-------------FMIPNKPPP- 217 (256)
T ss_pred c--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh-------------hhhccCCCC-
Confidence 1 122345788899999998888999999999999999999999998753221110 000000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
....+......+.+++.+||+.+|++|||+.|++++
T Consensus 218 ----~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 218 ----TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred ----CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 000122344678999999999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=334.39 Aligned_cols=271 Identities=20% Similarity=0.172 Sum_probs=198.8
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KA 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~ 778 (1002)
..++|+..+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++..... ..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999754 68899999987532 3345677889999999999999999998865431 11
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence 235799999976 67666643 3788889999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH--------
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL-------- 930 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~-------- 930 (1002)
...... ......||..|+|||++.+..++.++|||||||++|||++|+.||........ ....+....
T Consensus 168 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 168 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMK 243 (355)
T ss_pred cCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHH
Confidence 654322 12345689999999999888999999999999999999999999975321100 000000000
Q ss_pred --hhhhhhcccCcc----------CChh--hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 931 --LISIMKIVDGSL----------LSRE--DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 931 --~~~~~~i~~~~~----------~~~~--~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
........+... .... .............+.+++.+|++.||++|||+.|+++|-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 000000000000 0000 000001112245688999999999999999999999984
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=325.65 Aligned_cols=255 Identities=30% Similarity=0.510 Sum_probs=198.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCc--EEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGM--EVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||.||+|++. ++. .+|+|.+.... ......+.+|++++.++ +||||+++++++...+ .
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~----~ 82 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----Y 82 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC----C
Confidence 46888899999999999999864 454 45777765432 33456788899999999 8999999999998766 6
Q ss_pred HHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC
Q 037042 781 KALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~ 845 (1002)
.++||||+++|+|.++++..+ ..+++.+++.++.|++.|++||| +++|+||||||+||++++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGE 159 (303)
T ss_pred ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecC
Confidence 789999999999999997542 24788899999999999999999 899999999999999999
Q ss_pred CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHH
Q 037042 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~ 924 (1002)
++.+||+|||++....... ......++..|+|||+..+..++.++|||||||++|||+| |..||...... +
T Consensus 160 ~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~ 231 (303)
T cd05088 160 NYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----E 231 (303)
T ss_pred CCcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-----H
Confidence 9999999999986432111 1112234567999999888889999999999999999998 99998653221 1
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.... +... .... .+..++..+.+++.+||+.+|++||++.+++++++++-.
T Consensus 232 ~~~~--------~~~~-~~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 232 LYEK--------LPQG-YRLE------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHHH--------HhcC-CcCC------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111 0000 0000 011234568899999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=330.74 Aligned_cols=253 Identities=19% Similarity=0.226 Sum_probs=197.8
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+++.. +++.||+|++.+.. ......+..|+.+++.++|++|+++++++...+ ..
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~----~~ 76 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN----YL 76 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----EE
Confidence 46889999999999999999865 68899999987531 223455778999999999999999999998776 67
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 77 ~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 77 YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred EEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 8999999999999999875556889999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE-----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
..... ......||+.|+|||++.+ +.++.++||||+||++|||++|+.||..... .+... +
T Consensus 154 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~--------~ 219 (331)
T cd05624 154 QDGTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYG--------K 219 (331)
T ss_pred CCCce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-----HHHHH--------H
Confidence 43322 2233568999999998765 4678999999999999999999999965321 11111 1
Q ss_pred cccCc--cCChhhhHHHhHHHHHHHHHHHHhHccccCCCC--CCCHHHHHHH
Q 037042 937 IVDGS--LLSREDIQFVAKEQCMSFVFNMAMECTVESPEK--RINAKEIVTR 984 (1002)
Q Consensus 937 i~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~evl~~ 984 (1002)
+.... ...... ....+..+.+++.+|+...+++ |++++++++|
T Consensus 220 i~~~~~~~~~p~~-----~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 220 IMNHEERFQFPSH-----ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHcCCCcccCCCc-----cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11110 000000 0123456888999988865544 5689999887
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=331.99 Aligned_cols=237 Identities=24% Similarity=0.303 Sum_probs=186.1
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHH-HHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECE-VMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|+.. +|+.||+|++.+.. ......+..|.. +++.++||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~----~~~lv~e 76 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE----KLYFVLD 76 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC----EEEEEEc
Confidence 46999999999999854 68999999987542 223344555554 467789999999999988766 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~- 151 (325)
T cd05604 77 FVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD- 151 (325)
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC-
Confidence 999999998887654 4889999999999999999999 89999999999999999999999999999875432221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||..|+|||++.+..++.++|||||||++|||++|+.||...... +... .+.......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~--------~~~~~~~~~-- 215 (325)
T cd05604 152 -TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----EMYD--------NILHKPLVL-- 215 (325)
T ss_pred -CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----HHHH--------HHHcCCccC--
Confidence 223456899999999999999999999999999999999999999753211 1111 111111110
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAK 979 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 979 (1002)
....+..+.+++.+|++.+|.+||++.
T Consensus 216 ------~~~~~~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 216 ------RPGASLTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred ------CCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence 011335677899999999999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=331.31 Aligned_cols=264 Identities=19% Similarity=0.194 Sum_probs=194.1
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
...+|++.+.||+|+||.||+|+.. +++.||+|+.... ....|+.++++++||||+++++++..+. ..+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~ 133 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGA----ITC 133 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCC----eeE
Confidence 3457999999999999999999865 5788999985432 2346899999999999999999998776 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|+||+. ++|.+++......+++..+..|+.||+.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 134 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred EEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 9999995 5899988776667899999999999999999999 89999999999999999999999999999975432
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc-ccHHHHHHHHHhhhhh--hccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG-MTLKHWVNDWLLISIM--KIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~-~~~~~~~~~~~~~~~~--~i~~ 939 (1002)
.. ......||..|+|||++.+..++.++|||||||++|||+++..|+....... ..............+. .+..
T Consensus 210 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 286 (357)
T PHA03209 210 AP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHP 286 (357)
T ss_pred Cc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccCh
Confidence 21 1234568999999999999899999999999999999999666543321111 0000000000000000 0000
Q ss_pred CccC----C---------------hh-hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 940 GSLL----S---------------RE-DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 940 ~~~~----~---------------~~-~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.... . .. ..........+..+.++|.+||++||++|||+.|+++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 287 EEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred hhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 0000 0 00 00000111234456779999999999999999999987
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=317.71 Aligned_cols=254 Identities=26% Similarity=0.476 Sum_probs=204.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|++.+.||+|+||+||+|...++..||||.+.... ...+.+.+|+.++++++|+||+++++++.... ..++|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v 79 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE----PIYIV 79 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCC----ceEEE
Confidence 46789999999999999999998888899999987543 23467889999999999999999999987655 56899
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++++|.+++.... ..+++..+..++.+++.|++||| +.+|+||||||+||++++++.+||+|||+++.+...
T Consensus 80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999997654 36899999999999999999999 889999999999999999999999999999876542
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .......++..|+|||...+..++.++||||+||++|||++ |+.||...... .... .+....
T Consensus 157 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~--------~~~~~~- 221 (261)
T cd05034 157 EY-TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-----EVLE--------QVERGY- 221 (261)
T ss_pred hh-hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH--------HHHcCC-
Confidence 21 11123335567999999988889999999999999999999 99998653211 1111 111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
... .+...+..+.+++.+|+..+|++||+++++.+.|+.
T Consensus 222 ~~~------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 RMP------RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCC------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 000 011234578999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=321.86 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=200.4
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++||||+++++++...+ ..++|+|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~----~~~~v~e 82 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN----NLWILIE 82 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC----EEEEEEE
Confidence 667788999999999999865 57889999987665556677889999999999999999999987766 5679999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~- 158 (282)
T cd06643 83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ- 158 (282)
T ss_pred ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccccc-
Confidence 99999999988765556899999999999999999999 89999999999999999999999999999876543221
Q ss_pred eeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 867 VTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
......++..|+|||++. ...++.++|||||||++|||++|+.||........ ... ........
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~---------~~~~~~~~ 227 (282)
T cd06643 159 -RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-LLK---------IAKSEPPT 227 (282)
T ss_pred -ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-HHH---------HhhcCCCC
Confidence 123346888999999863 34578899999999999999999999865321110 000 00000000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. .+...+..+.+++.+||+.+|++||++.++++|-.
T Consensus 228 ~~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 228 LA--------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred CC--------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 00 01123457889999999999999999999998754
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=342.93 Aligned_cols=273 Identities=18% Similarity=0.206 Sum_probs=195.7
Q ss_pred HHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccC------CCcceeeeEEec
Q 037042 701 LCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH------RNIIKIISCCSI 773 (1002)
Q Consensus 701 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~ 773 (1002)
+.....+|++.++||+|+||+||+|... .++.||||+++... ........|+.+++.++| ++++++++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3345678999999999999999999854 68899999986532 233456678888877754 458888888865
Q ss_pred CchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCC-----
Q 037042 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNM----- 847 (1002)
Q Consensus 774 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~----- 847 (1002)
... +.++|||++ +++|.+++.+.+ .+++..+..|+.||+.||+||| . .+||||||||+|||++.++
T Consensus 203 ~~~---~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 203 ETG---HMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred CCc---eEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCccccc
Confidence 431 457899988 778998887654 4889999999999999999999 6 5999999999999998765
Q ss_pred -----------cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc
Q 037042 848 -----------VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF 916 (1002)
Q Consensus 848 -----------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~ 916 (1002)
.+||+|||.+..... ......||+.|+|||++.+..|+.++|||||||++|||++|+.||....
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred ccccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 499999998864322 1234578999999999999999999999999999999999999997532
Q ss_pred cccc----------cHHHHHHHHHhhhhhhcccCcc-----CChhhh------HHHhHHHHHHHHHHHHhHccccCCCCC
Q 037042 917 NEGM----------TLKHWVNDWLLISIMKIVDGSL-----LSREDI------QFVAKEQCMSFVFNMAMECTVESPEKR 975 (1002)
Q Consensus 917 ~~~~----------~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~------~~~~~~~~~~~l~~li~~cl~~~P~~R 975 (1002)
..+. ....|..........++.+... ...... ...........+.+++.+||++||++|
T Consensus 350 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 429 (467)
T PTZ00284 350 NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR 429 (467)
T ss_pred hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence 2100 0011111100000000100000 000000 000001123568899999999999999
Q ss_pred CCHHHHHHHHHh
Q 037042 976 INAKEIVTRLLK 987 (1002)
Q Consensus 976 pt~~evl~~L~~ 987 (1002)
||++|+++|-+-
T Consensus 430 ~ta~e~L~Hp~~ 441 (467)
T PTZ00284 430 LNARQMTTHPYV 441 (467)
T ss_pred CCHHHHhcCccc
Confidence 999999998663
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=321.48 Aligned_cols=253 Identities=23% Similarity=0.312 Sum_probs=201.8
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.|++.+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++.... ..++|
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG----KLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC----eEEEE
Confidence 56889999999999999999865 58999999998766666778889999999999999999999987665 66899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|..++.+....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 9999999999988765556899999999999999999999 8999999999999999999999999999987543321
Q ss_pred ceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 865 QFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
. ......++..|+|||++. ...++.++|||||||++|||++|+.||...... ... .++..
T Consensus 165 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~~~--------~~~~~ 229 (292)
T cd06644 165 Q--RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVL--------LKIAK 229 (292)
T ss_pred c--ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-----HHH--------HHHhc
Confidence 1 112345788899999874 345788999999999999999999998653211 000 01111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..... ...+...+..+.+++.+||..+|++||++.|+++|-
T Consensus 230 ~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 270 (292)
T cd06644 230 SEPPT-----LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHP 270 (292)
T ss_pred CCCcc-----CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00000 001122345688999999999999999999999863
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=329.11 Aligned_cols=255 Identities=18% Similarity=0.204 Sum_probs=197.0
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..++||+|+||+||+++.. +++.||+|++.+.. ......+..|+.++..++|++|+++++++...+ ..
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~ 76 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN----NL 76 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC----EE
Confidence 36888999999999999999865 57889999986532 223345788999999999999999999988766 66
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+..+++..+..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 77 ~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 77 YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred EEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 8999999999999999876556899999999999999999999 8999999999999999999999999999997654
Q ss_pred CCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 862 REDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
..... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..... .+... .
T Consensus 154 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~-----~~~~~--------~ 219 (332)
T cd05623 154 EDGTV-QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYG--------K 219 (332)
T ss_pred cCCcc-eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH-----HHHHH--------H
Confidence 33221 223456899999999875 34689999999999999999999999975321 11111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCC--CCCCHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPE--KRINAKEIVTR 984 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~--~Rpt~~evl~~ 984 (1002)
+.......... .....++..+.+++.+|+..+|. .|+++.|+++|
T Consensus 220 i~~~~~~~~~p---~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 220 IMNHKERFQFP---AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HhCCCccccCC---CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11110000000 00122456678889988865444 47899999998
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=314.95 Aligned_cols=249 Identities=29% Similarity=0.441 Sum_probs=198.0
Q ss_pred ceeeccCcceEEEEEeC--C--CcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ--D--GMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
++||+|+||.||+|.+. + +..||+|.+..... ...+.+..|+.++++++||||+++++++... ..++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~v~e 75 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE-----PLMLVME 75 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC-----ceEEEEE
Confidence 46999999999999743 2 36899999876543 3456788999999999999999999987643 3479999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++.... .+++..+..++.|++.|++||| ..+++||||||+||+++.++.+||+|||+++........
T Consensus 76 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 76 LAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred eCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 999999999998765 5899999999999999999999 899999999999999999999999999999876543322
Q ss_pred ee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 867 VT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 867 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
.. .....++..|+|||...+..++.++|||||||++|||++ |+.||...... ....++.. ...
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~~~~-----------~~~-- 216 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAMLES-----------GER-- 216 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHc-----------CCc--
Confidence 11 122234567999999988889999999999999999998 99998664221 11111110 000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
...+..++..+.+++.+||..+|++||++.++++.|+++.
T Consensus 217 -----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 -----LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0011234567899999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=323.85 Aligned_cols=256 Identities=22% Similarity=0.273 Sum_probs=199.7
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh--hH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~--~~ 779 (1002)
+.+.|+..+.||+|+||+||+|... +++.||+|++.... .....+..|+.+++++ +||||+++++++...... ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 4567888899999999999999854 68899999987543 3346788899999998 799999999998754321 12
Q ss_pred HHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 4579999999999999988743 36889999999999999999999 8999999999999999999999999999997
Q ss_pred cccCCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
....... ......|+..|+|||++. ...++.++|||||||++|||++|+.||....... .....
T Consensus 160 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~~~~----- 228 (272)
T cd06637 160 QLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALFLI----- 228 (272)
T ss_pred ecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HHHHH-----
Confidence 6543221 223456888999999875 3458889999999999999999999986532211 11000
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
........ ....++..+.+++.+||..+|.+|||+.|+++|
T Consensus 229 -~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 229 -PRNPAPRL---------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred -hcCCCCCC---------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 00000000 011234568899999999999999999999876
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=323.71 Aligned_cols=267 Identities=20% Similarity=0.237 Sum_probs=202.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|++.+.||+|+||.||+|+.. ++..||+|.+.... ......+.+|++++++++||||+++++++..++ ..++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~l 76 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG----EISI 76 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC----EEEE
Confidence 36889999999999999999854 68889999987543 234466888999999999999999999998776 6689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+++++|.+++...+ .+++..+..++.|+++||+||| + .+++||||||+||+++.++.+||+|||++.....
T Consensus 77 v~ey~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 77 CMEHMDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred EeeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 999999999999997664 4888999999999999999999 5 5899999999999999999999999999876533
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh------
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK------ 936 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~------ 936 (1002)
.. .....++..|+|||+..+..++.++|||||||++|||++|+.||..... .....+...... ....
T Consensus 153 ~~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~ 225 (308)
T cd06615 153 SM----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVS-EGEAKESHRP 225 (308)
T ss_pred cc----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCccc-cccccCCccc
Confidence 21 1334688899999998888899999999999999999999999865321 111111110000 0000
Q ss_pred cccCccCChhh------h--------HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 937 IVDGSLLSRED------I--------QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 937 i~~~~~~~~~~------~--------~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
........... . ...........+.+++.+||..+|++||++.|++++.+-
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 226 VSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred ccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 00000000000 0 000001134568999999999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=321.90 Aligned_cols=269 Identities=23% Similarity=0.279 Sum_probs=196.0
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhc---cCCCcceeeeEEecCch-hhH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSI---RHRNIIKIISCCSIGDF-KAL 779 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~-~~~ 779 (1002)
+|++.+.||+|+||+||+|+.. +++.||+|.++... ......+.+|+++++.+ +||||+++++++..... ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999855 68999999987532 22234556677777665 69999999998865321 122
Q ss_pred HHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++ +|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 45799999975 8988887643 35889999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh---hhh
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI---SIM 935 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~ 935 (1002)
....... .....||..|+|||++.+..++.++||||+||++|||++|++||...... ..+.......... ...
T Consensus 157 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 157 IYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhCc
Confidence 6643221 13346788999999998888999999999999999999999998653221 1111111110000 000
Q ss_pred ---hcccCccC--ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 936 ---KIVDGSLL--SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 936 ---~i~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
........ ...... ...+.....+.+++.+|+++||++|||+.|++.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQ-SVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccccCCCCCCchH-HhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000 000000 0112345678899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=327.44 Aligned_cols=265 Identities=21% Similarity=0.291 Sum_probs=201.6
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-C-----CCcceeeeEEecCchhhH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-H-----RNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~~ 779 (1002)
+|.+.+.||+|+||.|.+|.. ++++.||||+++.. .....+...|+.+++.++ | -|+|++++||...+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~---- 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN---- 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc----
Confidence 789999999999999999974 57999999999765 345567788999999996 4 48999999998777
Q ss_pred HHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC--CCcEEEecccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD--NMVAHLSDFGI 856 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DfGl 856 (1002)
+.|||+|.++. +|.++++..+. .++...++.|+.||+.||.+|| ..+|||+||||+|||+.+ ...+||+|||.
T Consensus 262 HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 262 HLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred ceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccc
Confidence 88999999855 99999987654 6889999999999999999999 999999999999999963 45899999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh----
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI---- 932 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~---- 932 (1002)
|+.....-. + -.-+..|+|||++.+.+|+.+.||||||||++||++|.+.|.+..+ ...+..+++-....
T Consensus 338 Sc~~~q~vy--t---YiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne-~DQl~~I~e~lG~Pp~~m 411 (586)
T KOG0667|consen 338 SCFESQRVY--T---YIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE-YDQLARIIEVLGLPPPKM 411 (586)
T ss_pred ccccCCcce--e---eeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH-HHHHHHHHHHhCCCCHHH
Confidence 987654432 1 2335579999999999999999999999999999999877765322 12222211110000
Q ss_pred -----hhhhcccC---------------------------------ccC-ChhhhHHHhHHHHHHHHHHHHhHccccCCC
Q 037042 933 -----SIMKIVDG---------------------------------SLL-SREDIQFVAKEQCMSFVFNMAMECTVESPE 973 (1002)
Q Consensus 933 -----~~~~i~~~---------------------------------~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~ 973 (1002)
+..+.++. ... ................+.+++++|+.+||.
T Consensus 412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 00000000 000 001111111123446689999999999999
Q ss_pred CCCCHHHHHHHHH
Q 037042 974 KRINAKEIVTRLL 986 (1002)
Q Consensus 974 ~Rpt~~evl~~L~ 986 (1002)
+|+|+.++++|-+
T Consensus 492 ~R~tp~qal~Hpf 504 (586)
T KOG0667|consen 492 ERITPAQALNHPF 504 (586)
T ss_pred hcCCHHHHhcCcc
Confidence 9999999999855
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=315.95 Aligned_cols=253 Identities=26% Similarity=0.451 Sum_probs=194.1
Q ss_pred ceeeccCcceEEEEEeC----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|.+. ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++...+. ..++|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG---SPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC---CcEEEEe
Confidence 46899999999999753 24579999886432 3345678889999999999999999997754331 3569999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++........+..+..++.|+++|++||| ..+|+||||||+||++++++.+||+|||+++.+......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999999999876555778888999999999999999 899999999999999999999999999999765432211
Q ss_pred e--eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhC-CCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 867 V--TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTG-KKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 867 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
. ......++..|+|||+..+..++.++|||||||++|||++| .+||.... ....... +..+...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----~~~~~~~--------~~~~~~~ 221 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-----SFDITVY--------LLQGRRL 221 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH--------HhcCCCC
Confidence 1 11233456789999998888899999999999999999995 45554321 1111111 1111100
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
. .+..++..+.+++.+||..+|++||++.|+++.|+++..
T Consensus 222 ~-------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 222 L-------QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred C-------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0 011234568899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=329.42 Aligned_cols=237 Identities=24% Similarity=0.290 Sum_probs=185.4
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHH-HHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECE-VMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
++||+|+||.||+|+.. +++.||+|++.+.. ......+..|.. +++.++||||+++++++...+ ..++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~----~~~lv~e 76 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE----KLYFVLD 76 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC----EEEEEEc
Confidence 46999999999999864 68999999987542 122334455554 578899999999999987766 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+.+...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 151 (321)
T cd05603 77 YVNGGELFFHLQRER-CFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE- 151 (321)
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC-
Confidence 999999998886644 4788888999999999999999 89999999999999999999999999999875432221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+......
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~--------~i~~~~~~--- 214 (321)
T cd05603 152 -TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMYD--------NILHKPLQ--- 214 (321)
T ss_pred -ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHHH--------HHhcCCCC---
Confidence 22345689999999999888899999999999999999999999976321 11111 11111111
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAK 979 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 979 (1002)
.+......+.+++.+|++.+|.+||++.
T Consensus 215 -----~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 215 -----LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -----CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 0112345688999999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=324.86 Aligned_cols=270 Identities=21% Similarity=0.263 Sum_probs=201.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++...+ ..+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~----~~~ 80 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK----SLT 80 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC----eEE
Confidence 357899999999999999999865 68899999987543 233456778999999999999999999998766 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||++ ++|.+++...+..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 156 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSI 156 (301)
T ss_pred EEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence 9999997 5999988776666889999999999999999999 89999999999999999999999999999976543
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh----hhhhc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI----SIMKI 937 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~----~~~~i 937 (1002)
... ......++..|+|||+..+ ..++.++|||||||++|||++|+.||........ . ..+...... ....+
T Consensus 157 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 157 PTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ-L-HFIFRILGTPTEETWPGI 232 (301)
T ss_pred CCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-H-HHHHHHcCCCChhhchhh
Confidence 221 1233456889999998765 3578899999999999999999999976432110 0 000000000 00000
Q ss_pred ccCcc------CC-hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 VDGSL------LS-REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~------~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..... .. ............+..+.+++.+|++.+|.+|||++|+++|-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 00000 00 000000011234567889999999999999999999998643
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=314.71 Aligned_cols=252 Identities=27% Similarity=0.433 Sum_probs=202.3
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.+|+..+.||+|+||.||+|.+.+++.+|+|++..... ....+..|++++++++||||+++++++.... ..++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS----PICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC----ceEEEE
Confidence 46788899999999999999887788999999875432 3467889999999999999999999987665 568999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++++|.+++...+..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 154 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ- 154 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCc-
Confidence 999999999999876666889999999999999999999 8899999999999999999999999999987654322
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
........++..|+|||+..++.++.++|||||||++|||++ |+.||..... ...... +.+.... .
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~-----~~~~~~~--~- 221 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVET-----INAGFRL--Y- 221 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHH-----HhCCCCC--C-
Confidence 111223345678999999888889999999999999999998 9999865321 111111 1100000 0
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+...+..+.+++.+||+.+|++||++.|++++|.
T Consensus 222 -------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 222 -------KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred -------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 01112456899999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=322.53 Aligned_cols=252 Identities=21% Similarity=0.314 Sum_probs=199.5
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
|+..+.||+|+||.||+|... +++.||||.+.+.. ......+..|+.++++++|++|+++++++...+ ..++
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~----~~~l 77 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD----ALCL 77 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC----EEEE
Confidence 677789999999999999854 68999999986542 122345678999999999999999999987766 5689
Q ss_pred hhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++.....
T Consensus 78 v~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 78 VLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 999999999999886543 25889999999999999999999 89999999999999999999999999999876543
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... .....|+..|+|||++.+..++.++||||+||++|||++|+.||........ .... ..+.+..
T Consensus 155 ~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~---------~~~~~~~- 220 (285)
T cd05630 155 GQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEV---------ERLVKEV- 220 (285)
T ss_pred Ccc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHH---------Hhhhhhh-
Confidence 321 1334689999999999888999999999999999999999999976322110 0000 0000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRLL 986 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L~ 986 (1002)
....+......+.+++.+||+.+|++||| +.|+++|-+
T Consensus 221 ------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 221 ------QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred ------hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 00011223456889999999999999999 899998643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=326.93 Aligned_cols=260 Identities=27% Similarity=0.438 Sum_probs=204.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCc
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGD 775 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 775 (1002)
.+|++.+.||+|+||.||+|+.. .+..||+|++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999742 12369999887543 33457788999999999 7999999999998766
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCC
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~N 840 (1002)
..++|+||+++|+|.+++.... ..+++.++..++.|+++|++||| .++|+||||||+|
T Consensus 92 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~N 164 (334)
T cd05100 92 ----PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARN 164 (334)
T ss_pred ----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccce
Confidence 5689999999999999987532 24788889999999999999999 8999999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCccccccc
Q 037042 841 VLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEG 919 (1002)
Q Consensus 841 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~ 919 (1002)
|+++.++.+||+|||+++...............++..|+|||+..+..++.++|||||||++|||++ |..||....
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--- 241 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP--- 241 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC---
Confidence 9999999999999999987654332222223344567999999988899999999999999999998 888886532
Q ss_pred ccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 920 MTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
..++.... ..+... . .+..++..+.+++.+||+.+|++||++.|++++|+++....
T Consensus 242 --~~~~~~~~--------~~~~~~-~------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 242 --VEELFKLL--------KEGHRM-D------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred --HHHHHHHH--------HcCCCC-C------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11111111 011000 0 01123467889999999999999999999999999998443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=321.76 Aligned_cols=254 Identities=24% Similarity=0.328 Sum_probs=204.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
++|++.+.||+|+||.||+|+.. ++..||+|++........+.+..|++++++++||||+++++++.... ..++|
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 80 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN----KLWIL 80 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC----eEEEE
Confidence 56888999999999999999864 68999999988665566678889999999999999999999988765 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++...+..+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 9999999999999876667899999999999999999999 8999999999999999999999999999987654322
Q ss_pred ceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 865 QFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
. ......++..|+|||+.. ...++.++|||||||++|||++|+.||....... .. .++..
T Consensus 158 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-----~~--------~~~~~ 222 (280)
T cd06611 158 Q--KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-----VL--------LKILK 222 (280)
T ss_pred c--ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-----HH--------HHHhc
Confidence 1 123346888999999864 3457889999999999999999999987532211 11 11111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... ..+...+..+.+++.+||+.+|++||++.++++|-+
T Consensus 223 ~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 223 SEPPTL-----DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred CCCCCc-----CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChh
Confidence 100000 011223456889999999999999999999999854
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=315.74 Aligned_cols=254 Identities=25% Similarity=0.338 Sum_probs=204.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
++|+..+.||+|+||.||+|... +++.+|+|++........+.+.+|++++++++||||+++++++..++ ..+++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD----KLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC----EEEEE
Confidence 57888999999999999999864 67899999998665556688899999999999999999999987766 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++......++...+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 9999999999999876556899999999999999999999 8999999999999999999999999999997655322
Q ss_pred ceeeeccCCCCcccccccccCCC---CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 865 QFVTQTQTPATIGYMALEYGSEG---RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
. ......++..|+|||..... .++.++|||||||++|||++|+.||......... . .+....
T Consensus 156 ~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-~------------~~~~~~ 220 (262)
T cd06613 156 A--KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-F------------LISKSN 220 (262)
T ss_pred h--ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-H------------HHHhcc
Confidence 1 12334678889999998766 7899999999999999999999998764321110 0 000000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.... . .......+..+.+++.+||..+|.+|||+.+++.|
T Consensus 221 ~~~~-~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 221 FPPP-K--LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred CCCc-c--ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0 00112345678999999999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=318.76 Aligned_cols=257 Identities=26% Similarity=0.417 Sum_probs=205.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCc----EEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGM----EVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|+..+.||+|+||+||+|.+. +|+ .||+|.+..... .....+.+|+.++++++||||+++++++.. .
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~---- 81 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-S---- 81 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C----
Confidence 46888899999999999999854 333 589998875543 345678899999999999999999999876 2
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++......+++..+..++.||++|++||| +.+|+||||||+||++++++.+||+|||+++.
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence 467999999999999999887667899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
..............++..|+|||......++.++|||||||++||+++ |+.||..... .++... +.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~--------~~ 225 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-----VEIPDL--------LE 225 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHHH--------Hh
Confidence 654433222223334678999999888889999999999999999998 9999876322 111111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..+...+.+++.+||..+|.+||++.++++.|.++..
T Consensus 226 ~~~~~~-------~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 226 KGERLP-------QPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111000 011234568899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=316.14 Aligned_cols=248 Identities=25% Similarity=0.374 Sum_probs=198.7
Q ss_pred ceeeccCcceEEEEEeCC--C--cEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQD--G--MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||.||+|.+.+ + ..||+|++..... ...+.+..|++++++++||||+++++++.. . ..++|+|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~----~~~~v~e 75 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H----PLMMVTE 75 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-C----eEEEEEE
Confidence 468999999999998643 3 3699999987655 566789999999999999999999999876 3 5679999
Q ss_pred cCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 787 YMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
|+++|+|.+++.... ..+++..++.++.|+++||+||| +++++||||||+||+++.++.+||+|||+++.+.....
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEecccccccccccccc
Confidence 999999999997755 46899999999999999999999 89999999999999999999999999999987754332
Q ss_pred eee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 866 FVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 866 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
... .....++..|+|||+.....++.++|||||||++|||++ |+.||...... +..... .... ...
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~-----~~~~-~~~- 220 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-----QILKKI-----DKEG-ERL- 220 (257)
T ss_pred ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH-----HhcC-CcC-
Confidence 211 123456788999999988889999999999999999999 99998653221 111110 0000 000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 221 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 -------ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011234567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=320.48 Aligned_cols=253 Identities=27% Similarity=0.428 Sum_probs=197.8
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhH--HHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAF--KSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
|+..+.||+|+||+||+|+.. +++.||+|++........ ....+|+.++++++||||+++++++.... ..++|
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~~v 76 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN----YLYIV 76 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS----EEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc----ccccc
Confidence 567789999999999999865 577899999987643322 23455999999999999999999998765 55799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||.+.......
T Consensus 77 ~~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~ 152 (260)
T PF00069_consen 77 MEYCPGGSLQDYLQKNK-PLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN 152 (260)
T ss_dssp EEEETTEBHHHHHHHHS-SBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT
T ss_pred ccccccccccccccccc-cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 99999999999998333 4899999999999999999999 8899999999999999999999999999997642211
Q ss_pred ceeeeccCCCCcccccccccC-CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGS-EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.......++..|+|||+.. +..++.++||||+|+++|+|++|..||....... ..............
T Consensus 153 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~--~~~~~~~~~~~~~~-------- 220 (260)
T PF00069_consen 153 --ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD--QLEIIEKILKRPLP-------- 220 (260)
T ss_dssp --SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH--HHHHHHHHHHTHHH--------
T ss_pred --cccccccccccccccccccccccccccccccccccccccccccccccccccchh--hhhhhhhccccccc--------
Confidence 2334567899999999988 7889999999999999999999999998751110 01111000000000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
............+.+++.+||+.+|++||++.++++|
T Consensus 221 ----~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 221 ----SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp ----HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ----ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000001112679999999999999999999999876
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=321.64 Aligned_cols=251 Identities=25% Similarity=0.334 Sum_probs=203.6
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+|+..+.||+|+||.||+|.. .+++.||+|.+........+.+..|+.+++.++||||+++++++..++ ..++|
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~lv 94 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD----ELWVV 94 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----EEEEe
Confidence 5799999999999999999985 579999999987655555677889999999999999999999998766 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++... .+++.++..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 95 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred ecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 9999999999998653 4788899999999999999999 8999999999999999999999999999997654432
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......+++.|+|||...+..++.++|||||||++|+|++|+.||......... ..+.......
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~-------------~~~~~~~~~~ 234 (297)
T cd06656 170 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-------------YLIATNGTPE 234 (297)
T ss_pred c--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe-------------eeeccCCCCC
Confidence 2 112346788999999988888999999999999999999999999653321110 0000000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...+...+..+.+++.+||..+|++||++.++++|=
T Consensus 235 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (297)
T cd06656 235 -----LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP 270 (297)
T ss_pred -----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 001223446688999999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=350.47 Aligned_cols=254 Identities=26% Similarity=0.370 Sum_probs=206.0
Q ss_pred hhcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.+-+|+...+||.|.||.||-|. .++|+..|||.++.. .....+.+.+|..++..++|||+|++||+-...+ .
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe----k 1308 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE----K 1308 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH----H
Confidence 44578889999999999999997 667999999987643 2445678889999999999999999999877655 6
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.+|.||||++|+|.+.++..+. .++.....+..|++.|++||| +.|||||||||+||+++.+|.+|.+|||.|..+
T Consensus 1309 v~IFMEyC~~GsLa~ll~~gri-~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGRI-EDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHHHhccCcHHHHHHhcch-hhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEe
Confidence 7899999999999999977653 667777788999999999999 999999999999999999999999999999887
Q ss_pred cCCCcee--eeccCCCCcccccccccCCC---CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 861 TREDQFV--TQTQTPATIGYMALEYGSEG---RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 861 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
....... .-....||+.|||||++.+. +...++||||+|||+.||+||+.||.....+ |..-+
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne------~aIMy------ 1452 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE------WAIMY------ 1452 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch------hHHHh------
Confidence 6542111 12346799999999987653 4678899999999999999999999875443 22211
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.+.-+. ....|+....+-.+++..|+..||++|.++.|+++|
T Consensus 1453 ~V~~gh-------~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1453 HVAAGH-------KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HHhccC-------CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 111111 111234466778899999999999999999988876
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=328.70 Aligned_cols=271 Identities=22% Similarity=0.232 Sum_probs=198.1
Q ss_pred HhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK-- 777 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 777 (1002)
...++|+..+.||+|+||+||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++......
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3467899999999999999999985 468899999987542 22345677899999999999999999887543211
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
....++++|++ +++|.+++... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccc
Confidence 12346888987 77998887643 4889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--h-
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--S- 933 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~- 933 (1002)
+..... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+..+....... .
T Consensus 166 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 166 RQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGTPSPEV 239 (343)
T ss_pred eecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCHHH
Confidence 865432 134568999999998766 56899999999999999999999999653211 1111111100000 0
Q ss_pred hhhccc-------CccCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVD-------GSLLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~-------~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..++.. ..... ...... ........+.+++.+|++.||++|||+.|+++|-+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~ 300 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKK-IFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY 300 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHH-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 000000 00000 000000 00112345789999999999999999999998843
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=319.85 Aligned_cols=253 Identities=24% Similarity=0.321 Sum_probs=199.6
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
++|+..+.||+|+||.||+|+. .+++.||+|+++.........+.+|+.+++.++||||+++++++...+ ..++|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~----~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD----KLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC----EEEEE
Confidence 4678889999999999999985 468999999987665555567888999999999999999999987766 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++...+ .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 85 MEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI 160 (267)
T ss_pred EeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence 99999999999987654 4889999999999999999999 8899999999999999999999999999987654322
Q ss_pred ceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 865 QFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.......|+..|+|||++. ...++.++||||+||++|||++|..||........ . + ......
T Consensus 161 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~--~----------~~~~~~ 225 (267)
T cd06645 161 --AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-L--F----------LMTKSN 225 (267)
T ss_pred --cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-H--H----------hhhccC
Confidence 1223456889999999864 45688999999999999999999999865322111 0 0 000000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
...... ......+..+.+++.+|+..+|++||+++++++|
T Consensus 226 ~~~~~~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 226 FQPPKL---KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CCCCcc---cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 000000 0001123457899999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=317.50 Aligned_cols=254 Identities=21% Similarity=0.295 Sum_probs=205.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEee--cccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
...|++.++||+||-+.||++...+.+.||+|.+. ..+......|..|+..+.++ .|.+||++|+|-..++ +.
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~----~l 435 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG----YL 435 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc----eE
Confidence 35689999999999999999998888888888764 33455678899999999999 5999999999988766 78
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
||||||=+. +|..++...........++.+.+|++.|+.++| ..||||.||||.|+|+- .|.+||+|||+|..+.
T Consensus 436 YmvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 436 YMVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQ 510 (677)
T ss_pred EEEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccC
Confidence 999998644 999999887765554578899999999999999 99999999999999995 4799999999999888
Q ss_pred CCCceeeeccCCCCcccccccccCCC-----------CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEG-----------RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
.+........-+||+.||+||.+... +.+.++||||+|||+|+|+.|+.||..... .|
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~----- 579 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------QI----- 579 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------HH-----
Confidence 77666666677899999999975432 267889999999999999999999976321 11
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.++..|.++.-..+.. ... ...++.++|+.||.+||.+||+..|+++|
T Consensus 580 -aKl~aI~~P~~~Iefp-~~~----~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 580 -AKLHAITDPNHEIEFP-DIP----ENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred -HHHHhhcCCCcccccc-CCC----CchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 1244555553211111 111 11238899999999999999999999987
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=315.51 Aligned_cols=252 Identities=21% Similarity=0.336 Sum_probs=200.2
Q ss_pred CCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc------chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC------GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
+|+..+.||+|+||+||+|...+++.||||.+.... ......+.+|++++++++|+||+++++++...+ .
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~ 76 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN----T 76 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC----e
Confidence 478889999999999999988889999999886432 223456888999999999999999999998775 6
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++|+||+++++|.+++.+.. .+++..+..++.|++.|++||| +.+|+|+||||+||++++++.++|+|||++...
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 77 ISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 789999999999999997654 4788899999999999999999 899999999999999999999999999998765
Q ss_pred cCCCc----eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 861 TREDQ----FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 861 ~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
..... ........++..|+|||+..+..++.++|||||||++|||++|+.||....... ... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~---------~ 219 (265)
T cd06631 153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA----AMF---------Y 219 (265)
T ss_pred hhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH----HHH---------H
Confidence 32111 111123468889999999988889999999999999999999999996532111 000 0
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+......... .+...+..+.+++.+||..+|++||++.|+++|
T Consensus 220 ~~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 220 IGAHRGLMPR-----LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred hhhccCCCCC-----CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000000 011234668899999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=315.19 Aligned_cols=250 Identities=24% Similarity=0.318 Sum_probs=198.1
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+|+..+.||+|+||.||+|.. .+++.||+|++.... ......+..|++++++++||||+++++++...+ ..++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 77 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN----RISIC 77 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC----EEEEE
Confidence 578889999999999999975 478999999987542 334567889999999999999999999998766 45799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|..+. .+++..+..++.|++.|++||| +.+|+|+||||+||+++.++.+||+|||++.......
T Consensus 78 ~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~ 149 (279)
T cd06619 78 TEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI 149 (279)
T ss_pred EecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence 9999999997653 3678888899999999999999 8999999999999999999999999999997654322
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccccc--HHHHHHHHHhhhhhhcccCcc
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT--LKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.....||..|+|||++.+..++.++|||||||++|||++|+.||......... ...+... +.+...
T Consensus 150 ----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------~~~~~~ 217 (279)
T cd06619 150 ----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC--------IVDEDP 217 (279)
T ss_pred ----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHH--------HhccCC
Confidence 23457889999999998888999999999999999999999999764332111 1111110 000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... .....+..+.+++.+|++.+|++||+++|+++|-+
T Consensus 218 ~~~------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 218 PVL------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred CCC------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence 000 01112356889999999999999999999998854
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=321.75 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=198.1
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
|+..+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++|++|+++++++..++ ..++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~----~~~l 77 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD----ALCL 77 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC----EEEE
Confidence 667789999999999999864 68999999986542 222345778999999999999999999887766 5689
Q ss_pred hhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+++++|.+++...+ ..+++..+..++.|++.|+.||| +.+|+||||||+||++++++.+||+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05632 78 VLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE 154 (285)
T ss_pred EEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence 999999999998887543 36899999999999999999999 89999999999999999999999999999976543
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... .....|+..|+|||++.+..++.++|+||+||++|||++|+.||........ ...+.. .+.....
T Consensus 155 ~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~--------~~~~~~~ 222 (285)
T cd05632 155 GES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDR--------RVLETEE 222 (285)
T ss_pred CCc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH--------hhhcccc
Confidence 221 1334689999999999888899999999999999999999999975322110 111100 0111000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTR 984 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~ 984 (1002)
. .+...+..+.+++.+|++.+|++||+ +.++++|
T Consensus 223 ~--------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 223 V--------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred c--------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 0 01123456789999999999999999 7788876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=321.97 Aligned_cols=252 Identities=27% Similarity=0.345 Sum_probs=204.1
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+|+..+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++ ..++|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD----ELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc----eEEEE
Confidence 4688899999999999999974 578999999987655555677889999999999999999999988766 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
+||+++++|.+++... .+++.++..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 95 MEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred EEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 9999999999988654 4899999999999999999999 8999999999999999999999999999987655432
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......++..|+|||...+..++.++|||||||++|||++|+.||........ ... +.....+..
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-----~~~-----~~~~~~~~~-- 235 (296)
T cd06655 170 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LYL-----IATNGTPEL-- 235 (296)
T ss_pred c--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHH-----HHhcCCccc--
Confidence 2 11234688899999998888899999999999999999999999976432111 000 000000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+..++..+.+++.+||..+|++||++.++++|=+
T Consensus 236 ------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~ 271 (296)
T cd06655 236 ------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPF 271 (296)
T ss_pred ------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 011234567889999999999999999999998733
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=330.17 Aligned_cols=271 Identities=19% Similarity=0.154 Sum_probs=198.8
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--h
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--A 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~ 778 (1002)
..++|+..+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++...+.. .
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3568999999999999999999854 68899999987532 33456778899999999999999999987654311 1
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 235799999975 77777643 3788889999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH--------
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL-------- 930 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~-------- 930 (1002)
...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||....... .....+....
T Consensus 175 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 175 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred ccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 654322 1234568999999999999999999999999999999999999997532211 0111110000
Q ss_pred --hhhhhhcccCccC--Chh----hh------HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 931 --LISIMKIVDGSLL--SRE----DI------QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 931 --~~~~~~i~~~~~~--~~~----~~------~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
............. ... .. ...........+.+++.+|++.||++|||+.|+++|-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp 319 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 0000000000000 000 00 0000111235688999999999999999999999984
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=319.25 Aligned_cols=239 Identities=23% Similarity=0.359 Sum_probs=188.3
Q ss_pred ceeeccCcceEEEEEeCC--------CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 712 NLIGRGGFGSVYKARIQD--------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+.||+|+||.||+|.... ...||+|.+........+.+..|+.+++.++||||+++++++..++ ..++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~----~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD----ESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC----CcEE
Confidence 368999999999997532 3358889887655555677888999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc--------EEEeccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV--------AHLSDFG 855 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~--------~kl~DfG 855 (1002)
||||+++|+|.++++..+..+++..+..++.||+.|++||| +++|+||||||+||+++.++. ++++|||
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 99999999999999876666899999999999999999999 899999999999999987765 6999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCC-CCCcccccccccHHHHHHHHHhhh
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGK-KPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~-~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
++...... ....++..|+|||++.+. .++.++|||||||++|||++|. .|+...... ....
T Consensus 154 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-----~~~~------ 216 (258)
T cd05078 154 ISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-----KKLQ------ 216 (258)
T ss_pred cccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-----HHHH------
Confidence 88755432 224577889999988764 5799999999999999999995 554332111 0000
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
+...... .+......+.+++.+||+.+|++|||++++++.|
T Consensus 217 ---~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 217 ---FYEDRHQ--------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ---HHHcccc--------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0000000 0111235688999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=315.48 Aligned_cols=251 Identities=23% Similarity=0.330 Sum_probs=187.8
Q ss_pred ceeeccCcceEEEEEeCC---CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 712 NLIGRGGFGSVYKARIQD---GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
+.||+|+||+||+|...+ ...||+|.+.... ......+.+|+++++.++||||+++++++...+ ..++||||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~----~~~lv~e~ 76 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI----PYLLVLEF 76 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC----ceEEEEEe
Confidence 358999999999997543 4568888876443 233466788999999999999999999988766 56899999
Q ss_pred CCCCChhHhhhccCC----cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 788 MPHGSLEKYLYSSNY----ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~----~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+++|+|.+++..... ..++.....++.||+.|++||| +++|+||||||+||++++++.+||+|||++......
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 153 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE 153 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccc
Confidence 999999999976542 3457778899999999999999 899999999999999999999999999998765433
Q ss_pred CceeeeccCCCCcccccccccC-------CCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 864 DQFVTQTQTPATIGYMALEYGS-------EGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
..........++..|+|||+.. ...++.++|||||||++|||++ |..||........ + .........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~----~~~~~~~~~ 228 (269)
T cd05042 154 DYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV-L----KQVVREQDI 228 (269)
T ss_pred hheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH-H----HHHhhccCc
Confidence 3222223445677899999853 2356889999999999999999 7888865322110 0 000000000
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.+..+. .+...+..+.+++..|| .+|++|||++||++.|
T Consensus 229 ~~~~~~----------~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 229 KLPKPQ----------LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCCCCc----------ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 111110 11224456778888998 5999999999999886
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=313.31 Aligned_cols=253 Identities=24% Similarity=0.427 Sum_probs=202.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||.||+|...++..||+|.+.... ...+.+.+|++++++++|+||+++++++.. . ..++|
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~----~~~~v 78 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E----PIYII 78 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C----CeEEE
Confidence 45788999999999999999997778889999887542 345678899999999999999999998865 2 45799
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ...++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999997643 35788899999999999999999 889999999999999999999999999999765433
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......++..|+|||++....++.++|||||||++||+++ |+.||....... ...+.. .. .
T Consensus 156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~-----------~~-~ 220 (260)
T cd05073 156 EYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALE-----------RG-Y 220 (260)
T ss_pred Ccc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHh-----------CC-C
Confidence 221 1223345677999999988889999999999999999999 999986532211 111100 00 0
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
... .+...+..+.+++.+|++++|++||++.++.+.|+.
T Consensus 221 ~~~------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 221 RMP------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCC------CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 000 011234568899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=317.89 Aligned_cols=269 Identities=21% Similarity=0.278 Sum_probs=208.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.... ..++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~l 80 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN----NICM 80 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC----EEEE
Confidence 46888899999999999999854 68999999886543 344578889999999999999999999998775 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++++|.+++...+ .+++..+..++.+++.|+.|||+ ..+++||||||+||++++++.++|+|||++......
T Consensus 81 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 81 CMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999999987654 48899999999999999999993 358999999999999999999999999998755322
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc---cHHHHHHHHHhhhhhhcccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM---TLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~ 940 (1002)
. .....|+..|+|||++.+..++.++|||||||++|||++|+.||........ ....+.. ....+...
T Consensus 158 ~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 228 (284)
T cd06620 158 I----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-----LLQQIVQE 228 (284)
T ss_pred c----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH-----HHHHHhhc
Confidence 1 1234688999999998888899999999999999999999999986433211 0000000 01111111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
.... .....++..+.+++.+|++.+|++|||+.|++++..-++.......
T Consensus 229 ~~~~------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~~~~~ 278 (284)
T cd06620 229 PPPR------LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRASNV 278 (284)
T ss_pred cCCC------CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccccccC
Confidence 0000 0011245678899999999999999999999998765554444333
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.76 Aligned_cols=250 Identities=24% Similarity=0.358 Sum_probs=199.2
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc---------hhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
+|...+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+.++++++||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD- 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-
Confidence 4777899999999999999854 688999998864321 12356888999999999999999999988766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++|+||+++++|.+++...+ .+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||.
T Consensus 80 ---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 80 ---HLNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred ---ccEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCC
Confidence 6789999999999999997654 4788889999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCce----eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 857 TKLLTREDQF----VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 857 a~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
++........ .......|+..|+|||...+..++.++||||+||++|||++|+.||...... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~-------- 220 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QA-------- 220 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HH--------
Confidence 9876532111 0112235788899999998888999999999999999999999999763211 10
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+.++...... ..+...+..+.+++.+||+.+|++||++.|++++
T Consensus 221 -~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 221 -IFKIGENASP-------EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred -HHHHhccCCC-------cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0111110000 0112345678899999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=325.28 Aligned_cols=245 Identities=26% Similarity=0.364 Sum_probs=197.4
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeec----ccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQ----QCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
.+||+|+|-+||||.+. +|.+||--.++- ......+.+..|+++++.++||||+++|.+|.+.... ...+|+|
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~--~in~iTE 123 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNK--TINFITE 123 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCc--eeeeeee
Confidence 57999999999999754 587887433221 1234457899999999999999999999999887643 3458999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEecccccccccCCCc
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~~~~~ 865 (1002)
.+..|+|..|+.+.+. ........|+.||++||.|||. +.++|||||||.+||+|+ .-|.|||+|.|+|+.+.....
T Consensus 124 L~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred cccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 9999999999998875 8888999999999999999995 478999999999999997 469999999999998765432
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
....|||.|||||+.. ..|+..+||||||++++||+|+.+||.......+-++....-..+..+.++-
T Consensus 202 ----ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~------- 269 (632)
T KOG0584|consen 202 ----KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVK------- 269 (632)
T ss_pred ----ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccC-------
Confidence 3368999999999865 7899999999999999999999999988755433222221111111222222
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.+++.++|.+|+.. ..+|||+.|++++
T Consensus 270 -----------dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 270 -----------DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred -----------CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 24688999999999 9999999999986
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=314.83 Aligned_cols=247 Identities=32% Similarity=0.532 Sum_probs=192.4
Q ss_pred ceeeccCcceEEEEEeC-CCc--EEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGM--EVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||.||+|+.. ++. .+|+|.+.... ......+..|+++++++ +||||+++++++...+ ..++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----~~~lv~e 76 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----YLYLAIE 76 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC----CceEEEE
Confidence 36899999999999865 343 47888887532 33456788999999999 7999999999998766 5689999
Q ss_pred cCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 787 YMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
|+++|+|.+++...+ ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+||
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl 153 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKI 153 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEE
Confidence 999999999987532 24788899999999999999999 899999999999999999999999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
+|||++....... .......+..|+|||+.....++.++|||||||++|||++ |..||...... .....
T Consensus 154 ~dfgl~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~-- 223 (270)
T cd05047 154 ADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEK-- 223 (270)
T ss_pred CCCCCccccchhh---hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHH--
Confidence 9999986322111 1112233567999999888889999999999999999997 99998653211 11111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
+..+... . .+..++..+.+++.+||+.+|.+|||+.|+++.|.++
T Consensus 224 ------~~~~~~~-~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 224 ------LPQGYRL-E------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred ------HhCCCCC-C------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 1000000 0 0112345688999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=312.92 Aligned_cols=249 Identities=20% Similarity=0.271 Sum_probs=200.1
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+|+..+.||+|+||.||+++.. +++.||+|.++.. .....+.+..|+.++++++||||+++++++...+ ..++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 76 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG----HLYIV 76 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC----EEEEE
Confidence 4778899999999999999854 6899999998643 2334567888999999999999999999998776 56899
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ..++...+..++.|++.|++||| +.+|+|+||||+||++++++.++++|||.+......
T Consensus 77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 99999999999886533 35788999999999999999999 899999999999999999999999999999766443
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......|+..|+|||+..+..++.++||||||+++|+|++|+.||..... ..... .+..+...
T Consensus 154 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~--------~~~~~~~~ 218 (255)
T cd08219 154 GA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLIL--------KVCQGSYK 218 (255)
T ss_pred cc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHH--------HHhcCCCC
Confidence 22 12335688899999999888899999999999999999999999975321 11111 11111100
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. .+...+..+.+++.+||+.+|++||++.|++..
T Consensus 219 ~-------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 P-------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred C-------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0 011234568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=311.16 Aligned_cols=250 Identities=23% Similarity=0.303 Sum_probs=202.9
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||.++. .+++.||+|.+... .......+.+|++++++++|+||+++++++.+.+ ..++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~ 76 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN----TLLI 76 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC----eEEE
Confidence 488889999999999999974 46899999988643 2344567889999999999999999999998766 5689
Q ss_pred hhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+++|+|.+++... ...+++.++..++.|+++|++||| +.+++||||||+||++++++.+||+|||++.....
T Consensus 77 ~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 77 EMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS 153 (256)
T ss_pred EEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccc
Confidence 99999999999999765 346889999999999999999999 88999999999999999999999999999986644
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......++..|+|||+..+..++.++||||||+++|||++|+.||..... .+... ++..+..
T Consensus 154 ~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~--------~~~~~~~ 218 (256)
T cd08221 154 EYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVV--------KIVQGNY 218 (256)
T ss_pred ccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHH--------HHHcCCC
Confidence 331 12345688899999998888889999999999999999999999865321 11111 1111111
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
... +..++..+.+++.+||+.+|++||++.|+++++
T Consensus 219 ~~~-------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 219 TPV-------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCC-------ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 100 123456788999999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=318.96 Aligned_cols=268 Identities=22% Similarity=0.235 Sum_probs=198.1
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|++++++++||||+++++++.... ..++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~----~~~l 76 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK----KLTL 76 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC----ceEE
Confidence 4778899999999999999864 68999999986532 223456778999999999999999999987766 6689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+||++ ++|.+++......+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 77 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 77 VFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred EEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 999997 4888888765556899999999999999999999 899999999999999999999999999999865433
Q ss_pred CceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh------hhhhh
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL------ISIMK 936 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------~~~~~ 936 (1002)
.. ......++..|+|||++.+. .++.++|||||||++|||++|+.|+.........+......... .....
T Consensus 153 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 153 VR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred CC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhh
Confidence 22 12334578899999987664 47899999999999999999999865432211111111110000 00001
Q ss_pred cccCccCCh---hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 937 IVDGSLLSR---EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 937 i~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+.+...... ..............+.+++.+||+.+|++|||++|+++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 101000000 000000112245678899999999999999999999886
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=315.86 Aligned_cols=249 Identities=28% Similarity=0.515 Sum_probs=195.7
Q ss_pred ceeeccCcceEEEEEeCC-------CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 712 NLIGRGGFGSVYKARIQD-------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+.||+|+||.||+|+..+ +..||+|.+.... ......+.+|+.++++++||||+++++++...+ ..++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~ 76 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE----PQYI 76 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC----CeEE
Confidence 368999999999998542 3579999886543 234677889999999999999999999987665 5689
Q ss_pred hhccCCCCChhHhhhccC------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-----cEEEe
Q 037042 784 ALEYMPHGSLEKYLYSSN------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-----VAHLS 852 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-----~~kl~ 852 (1002)
||||+++|+|.+++.... ..+++.+++.++.|++.|++||| +.+++|+||||+||+++.++ .+|++
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~ 153 (269)
T cd05044 77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIG 153 (269)
T ss_pred EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEEC
Confidence 999999999999987532 24788999999999999999999 89999999999999999877 89999
Q ss_pred cccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHh
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
|||+++...............++..|+|||++.++.++.++|||||||++|||++ |+.||...... .....
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~------ 225 (269)
T cd05044 154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQH------ 225 (269)
T ss_pred CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHH------
Confidence 9999976644332222223345678999999998899999999999999999998 99998653211 11110
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
+...... ..+..++..+.+++.+||..+|++||++.++++.|++
T Consensus 226 -----~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 226 -----VTAGGRL-------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred -----HhcCCcc-------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0000000 1112345678899999999999999999999999863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=323.85 Aligned_cols=264 Identities=18% Similarity=0.218 Sum_probs=194.1
Q ss_pred CCceeecc--CcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 710 ENNLIGRG--GFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 710 ~~~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
..++||+| +||+||+++. .+|+.||+|+++... ......+.+|+++++.++||||+++++++...+ ..++|
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~----~~~lv 77 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN----ELWVV 77 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC----EEEEE
Confidence 35689999 6789999975 479999999987542 234466788999999999999999999998776 56899
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++|||.+......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~ 154 (327)
T cd08227 78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINH 154 (327)
T ss_pred EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence 99999999999986542 35889999999999999999999 899999999999999999999999999875443221
Q ss_pred Cc-ee----eeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 864 DQ-FV----TQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 864 ~~-~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
.. .. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..... ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~----~~~~~~ 229 (327)
T cd08227 155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKL----NGTVPC 229 (327)
T ss_pred cccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH-HHHHh----cCCccc
Confidence 11 00 0122346778999999865 4589999999999999999999999975322111 00000 000000
Q ss_pred ccc------------------------Ccc---CCh---hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 937 IVD------------------------GSL---LSR---EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 937 i~~------------------------~~~---~~~---~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..+ ... ... ..............+.+++.+||+.||++|||++|+++|-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p 308 (327)
T cd08227 230 LLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS 308 (327)
T ss_pred cccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence 000 000 000 0000001123456789999999999999999999999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=315.12 Aligned_cols=255 Identities=24% Similarity=0.417 Sum_probs=202.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
++|+..+.||+|+||.||+|+.+ +.+.||+|.+...... ..+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE--- 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC---
Confidence 56888999999999999999853 3467999988754433 4678899999999999999999999987765
Q ss_pred HHHHHhhccCCCCChhHhhhccC--------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEE
Q 037042 779 LFKALALEYMPHGSLEKYLYSSN--------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH 850 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~--------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 850 (1002)
..++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++
T Consensus 82 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~ 157 (275)
T cd05046 82 -PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVK 157 (275)
T ss_pred -cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEE
Confidence 5689999999999999997654 14889999999999999999999 89999999999999999999999
Q ss_pred EecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHH
Q 037042 851 LSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 851 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
++|||++........ .......++..|+|||...+..++.++|||||||++|||++ |..||...... .....
T Consensus 158 l~~~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-----~~~~~- 230 (275)
T cd05046 158 VSLLSLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-----EVLNR- 230 (275)
T ss_pred EcccccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-----HHHHH-
Confidence 999999875433221 12233456778999999888888999999999999999999 78888643211 11111
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
+..+..... .+..++..+.+++.+||+.+|++||++.|++++|.+
T Consensus 231 -------~~~~~~~~~------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 231 -------LQAGKLELP------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred -------HHcCCcCCC------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 100111000 012245678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=317.22 Aligned_cols=264 Identities=23% Similarity=0.257 Sum_probs=197.5
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+|+.. ++..||+|++.... ......+.+|+.++++++||||+++++++..++ ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~ 76 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES----RLYL 76 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC----eEEE
Confidence 4778899999999999999864 68999999986432 233467888999999999999999999998766 6689
Q ss_pred hhccCCCCChhHhhhccC--CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSN--YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
||||++ ++|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 77 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 152 (285)
T cd07861 77 IFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFG 152 (285)
T ss_pred EEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence 999997 58988886533 46889999999999999999999 8999999999999999999999999999997654
Q ss_pred CCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH----------
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL---------- 930 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~---------- 930 (1002)
.... ......+++.|+|||+..+. .++.++|||||||++|||+||+.||........ .........
T Consensus 153 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 153 IPVR--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred CCcc--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhcc
Confidence 3321 12334568889999987654 478999999999999999999999975322111 000000000
Q ss_pred --hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 931 --LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 931 --~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
............. .... ......+.++.+++.+||..||++|||+.+++.|
T Consensus 230 ~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 230 TSLPDYKNTFPKWKK--GSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhhHHHHhhccccCc--chhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000000000 0000 0011245677899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=315.16 Aligned_cols=251 Identities=25% Similarity=0.308 Sum_probs=203.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||.|+||.||+|+.. +++.||+|++.... ......+.+|++++++++|+||+++++++..+. ..++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~ 76 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS----KLWI 76 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC----eEEE
Confidence 36888899999999999999855 68999999987543 344567889999999999999999999988765 6689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+||+++++|.+++... .+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||+++.....
T Consensus 77 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 77 IMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred EEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 99999999999999765 5899999999999999999999 899999999999999999999999999999877543
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......++..|+|||+..+..++.++|||||||++|||++|+.||....... .... +.....+...
T Consensus 152 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-----~~~~-----~~~~~~~~~~ 219 (274)
T cd06609 152 MS--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-----VLFL-----IPKNNPPSLE 219 (274)
T ss_pred cc--ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-----HHHH-----hhhcCCCCCc
Confidence 21 2234567888999999988889999999999999999999999996532111 0000 0000000000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....+..+.+++.+||..+|++|||++++++|-.
T Consensus 220 ---------~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~ 253 (274)
T cd06609 220 ---------GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKF 253 (274)
T ss_pred ---------ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChh
Confidence 0013456889999999999999999999998744
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=308.69 Aligned_cols=251 Identities=22% Similarity=0.334 Sum_probs=185.3
Q ss_pred eeeccCcceEEEEEeCCC---cEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 713 LIGRGGFGSVYKARIQDG---MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 713 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
.||+|+||.||+|+..++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++++.... ..++||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~----~~~lv~e~~ 77 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI----PYLLVFEYC 77 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC----ccEEEEecC
Confidence 589999999999975433 346677665433 234567899999999999999999999998765 568999999
Q ss_pred CCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 789 PHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 789 ~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
++|+|.+++.... ...+...+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchh
Confidence 9999999997642 23566777899999999999999 89999999999999999999999999999864332222
Q ss_pred eeeeccCCCCcccccccccCC-------CCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 866 FVTQTQTPATIGYMALEYGSE-------GRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
........++..|+|||+... ..++.++|||||||++|||++ |..||..... .+.......+.....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~ 229 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLNHVIKDQQVKL 229 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHhhccccc
Confidence 122234567889999998643 245789999999999999997 5667754221 111111111111111
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.++... ......+.+++..|| .+|++||+++|+++.|.
T Consensus 230 ~~~~~~----------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLE----------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccC----------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 221111 112356778999999 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=317.47 Aligned_cols=271 Identities=19% Similarity=0.224 Sum_probs=198.4
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++.+|+..+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+++++.++|+||+++++++..++ ..
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----~~ 78 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE----TL 78 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC----eE
Confidence 456899999999999999999975 468999999986543 223346778999999999999999999988765 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++|+||++ +++.+++......+.+..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 79 TFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred EEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 79999996 6887777655555788889999999999999999 8899999999999999999999999999987643
Q ss_pred CCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--------
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI-------- 932 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-------- 932 (1002)
.... ......++..|+|||+..+. .++.++|||||||++|||++|+.||.........+.+.+......
T Consensus 155 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07870 155 IPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGV 232 (291)
T ss_pred CCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhh
Confidence 3221 12334578899999987654 578899999999999999999999975432211111111100000
Q ss_pred ----hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 933 ----SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 933 ----~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..................+........+.+++.+|+..+|.+|||+.|++.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000000000000000001124568899999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=309.99 Aligned_cols=238 Identities=23% Similarity=0.378 Sum_probs=188.9
Q ss_pred ceeeccCcceEEEEEeCC-C----------cEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 712 NLIGRGGFGSVYKARIQD-G----------MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
+.||+|+||.||+|...+ + ..|++|++...... ...+.+|+.++++++||||+++++++.. . .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~----~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-D----E 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-C----C
Confidence 468999999999998654 3 25788877654333 6788899999999999999999999876 3 3
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-------cEEEec
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-------VAHLSD 853 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-------~~kl~D 853 (1002)
.++||||+++|+|.+++......+++..+..++.||+.||+||| +++|+||||||+||+++.++ .+||+|
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCC
Confidence 57999999999999999876656899999999999999999999 89999999999999999887 799999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCC--CcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHH
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEG--RVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
||++...... ....++..|+|||++... .++.++|||||||++|||++ |..||...... .+...+.
T Consensus 152 fg~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-----~~~~~~~ 220 (259)
T cd05037 152 PGIPITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-----EKERFYQ 220 (259)
T ss_pred CCcccccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-----hHHHHHh
Confidence 9999865431 233466789999998776 78999999999999999999 57777654211 1111100
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....... .....+.+++.+||..+|++|||+.|+++.|.
T Consensus 221 --------~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 --------DQHRLPM---------PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --------cCCCCCC---------CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000000 01156889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=318.00 Aligned_cols=265 Identities=21% Similarity=0.281 Sum_probs=202.0
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCc
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGD 775 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 775 (1002)
++.+....++|++.+.||+|+||+||+|... +++.||+|++.... .....+.+|+.+++++ +||||+++++++....
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 3444556789999999999999999999754 68899999876532 2345678899999999 6999999999875322
Q ss_pred h-hhHHHHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 776 F-KALFKALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 776 ~-~~~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
. .....++||||+++++|.+++.. .+..+++..+..++.|+++|+.||| +.+|+||||||+||++++++.+||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEE
Confidence 1 12256899999999999998753 2335788889999999999999999 899999999999999999999999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE-----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~ 926 (1002)
+|||+++....... ......|+..|+|||++.. ..++.++||||+||++|||++|+.||....... .+
T Consensus 166 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~----~~- 238 (286)
T cd06638 166 VDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR----AL- 238 (286)
T ss_pred ccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH----HH-
Confidence 99999976643221 1123468899999998643 457899999999999999999999986532211 10
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.++....... ...+......+.+++.+||+.+|++|||+.|++++..
T Consensus 239 --------~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 239 --------FKIPRNPPPT-----LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred --------hhccccCCCc-----ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 0100000000 0011113356889999999999999999999998853
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=308.69 Aligned_cols=250 Identities=31% Similarity=0.573 Sum_probs=200.1
Q ss_pred CCCCceeeccCcceEEEEEeCC-----CcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQD-----GMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
+++.+.||+|+||.||+|+..+ +..||+|++...... ..+.+..|+++++.++|+||+++++++...+ ..
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~ 76 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE----PL 76 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC----ee
Confidence 3566889999999999998653 388999999765433 5678899999999999999999999988765 56
Q ss_pred HHhhccCCCCChhHhhhccCCc-CCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~-l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
+++|||+++++|.+++...... +++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||+++..
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceec
Confidence 8999999999999999765543 899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
........ ....++..|+|||...+..++.++||||+||+++||++ |+.||..... ...... +..
T Consensus 154 ~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~--------~~~ 219 (258)
T smart00219 154 YDDDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----EEVLEY--------LKK 219 (258)
T ss_pred cccccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHH--------Hhc
Confidence 55432221 12346788999999888889999999999999999998 7888765211 111111 111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..... .+..++..+.+++.+|+..+|++|||+.|+++.|
T Consensus 220 ~~~~~-------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 220 GYRLP-------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCC-------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 10000 0112456789999999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=328.84 Aligned_cols=241 Identities=22% Similarity=0.247 Sum_probs=186.4
Q ss_pred eeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc---cCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI---RHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 714 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
||+|+||+||+|+.. +++.||||++.+.. .........|..++... +||||+++++++...+ ..++|||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~----~~~lv~e 76 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS----DLYLVTD 76 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC----eEEEEEc
Confidence 699999999999854 68999999987532 12233445566777665 6999999999988776 6689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~- 151 (330)
T cd05586 77 YMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK- 151 (330)
T ss_pred CCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-
Confidence 999999999987654 4889999999999999999999 89999999999999999999999999999876433221
Q ss_pred eeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 867 VTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
......||..|+|||++.+. .++.++||||+||++|||++|+.||..... .+.... +........
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~--------i~~~~~~~~ 217 (330)
T cd05586 152 -TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRN--------IAFGKVRFP 217 (330)
T ss_pred -CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHH--------HHcCCCCCC
Confidence 12345689999999987654 489999999999999999999999965321 111111 111110000
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCC----CHHHHHHH
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRI----NAKEIVTR 984 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp----t~~evl~~ 984 (1002)
.......+.+++.+||+.+|++|| ++.++++|
T Consensus 218 -------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 218 -------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred -------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 011345678999999999999998 57777776
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=314.67 Aligned_cols=267 Identities=22% Similarity=0.263 Sum_probs=200.0
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~ 76 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR----KLH 76 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC----EEE
Confidence 36888899999999999999865 68999999986432 223456788999999999999999999998766 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||++++.+..+..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 77 ~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 77 LVFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred EEEeccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 9999999988888765543 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh--hhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL--ISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ 939 (1002)
... ......++..|+|||+..+ ..++.++|||||||++|||++|+.||......+. ...+...... .....+.+
T Consensus 153 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 153 PGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred Ccc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHhhhcc
Confidence 332 1123457788999998765 4578999999999999999999999975432211 1111100000 00000000
Q ss_pred C----------ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 940 G----------SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 940 ~----------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. .......... .....+..+.+++.+||+++|++||++.|+++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLES-KFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccccccCCCcccccCHHH-HhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0 0000000000 011235678899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=318.22 Aligned_cols=254 Identities=23% Similarity=0.328 Sum_probs=200.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||+|+||+||+|+.. +|+.||+|.+... .......+.+|++++++++||||+++++++...+ ..++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~l 76 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG----AVYM 76 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC----eEEE
Confidence 36888899999999999999865 7899999988754 2334567889999999999999999999887765 6689
Q ss_pred hhccCCCCChhHhhhcc--CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSS--NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
||||+++++|.+++... ...+++..+..++.|+++|+.|||+ +.+|+||||||+||+++.++.+||+|||++....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99999999999998764 2258999999999999999999993 3589999999999999999999999999997654
Q ss_pred CCCceeeeccCCCCcccccccccCCC------CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEG------RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
... .....++..|+|||...+. .++.++|||||||++|||++|+.||...... .+.. .+.
T Consensus 155 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~-----~~~ 220 (286)
T cd06622 155 ASL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFA-----QLS 220 (286)
T ss_pred CCc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----hHHH-----HHH
Confidence 322 1234578889999987543 3588999999999999999999999653211 1110 011
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+.+..... .+..+...+.+++.+||+.+|++||++.+++.+-+
T Consensus 221 ~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 221 AIVDGDPPT-------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred HHhhcCCCC-------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 111111110 11234567889999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=312.17 Aligned_cols=258 Identities=29% Similarity=0.502 Sum_probs=199.2
Q ss_pred CCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh--H
Q 037042 708 FSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA--L 779 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--~ 779 (1002)
|.+.+.||+|+||+||+|.+. ++..||||++.... ....+.+.+|++++++++||||+++++++....... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566788999999999999753 36889999987542 334567889999999999999999999886543211 1
Q ss_pred HHHHhhccCCCCChhHhhhcc-----CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 780 FKALALEYMPHGSLEKYLYSS-----NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
..++++||+++|+|.+++... ...+++.....++.||+.|++||| +.+|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 235788999999998887532 124788889999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
|+++...............++..|++||......++.++|||||||++|||++ |+.||...... ....++.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~------ 229 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLI------ 229 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHH------
Confidence 99987654332222233455678999999888889999999999999999999 88888653221 1111100
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
...... .+..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 230 -----~~~~~~-------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 -----KGNRLK-------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----cCCcCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000000 0112346789999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=316.93 Aligned_cols=249 Identities=24% Similarity=0.313 Sum_probs=200.2
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.|+..+.||+|+||.||+|... +++.||+|++.... ....+.+..|++++++++||||+++++++.... ..++|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 80 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT----KLWII 80 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC----ceEEE
Confidence 4666788999999999999754 58899999987443 344567889999999999999999999987766 66899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++... .+++..+..++.|+++|+.||| +++++|+||+|+||++++++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 81 MEYLGGGSALDLLKPG--PLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEccCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 9999999999998653 4788999999999999999999 8999999999999999999999999999997665332
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......++..|+|||+..+..++.++|||||||++|||++|+.||........ .. .+......
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~-----------~~~~~~~~- 219 (277)
T cd06642 156 I--KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LF-----------LIPKNSPP- 219 (277)
T ss_pred h--hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--Hh-----------hhhcCCCC-
Confidence 1 11234578889999999888899999999999999999999999865322110 00 00000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.....++..+.+++.+||+.+|++||++.|+++|-.
T Consensus 220 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 220 ------TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred ------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence 001124466889999999999999999999999744
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=319.26 Aligned_cols=196 Identities=22% Similarity=0.282 Sum_probs=158.7
Q ss_pred ceeeccCcceEEEEEeC---CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 712 NLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
.+||+|+||+||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++...... ..++||||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDR--KVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCC--eEEEEEeee
Confidence 68999999999999854 45789999987542 234577899999999999999999988653322 457999998
Q ss_pred CCCChhHhhhcc--------CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee----CCCCcEEEecccc
Q 037042 789 PHGSLEKYLYSS--------NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAHLSDFGI 856 (1002)
Q Consensus 789 ~~g~L~~~l~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGl 856 (1002)
++ +|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 65 777776422 124788889999999999999999 8999999999999999 5678999999999
Q ss_pred cccccCCCce-eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCccc
Q 037042 857 TKLLTREDQF-VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEI 915 (1002)
Q Consensus 857 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~ 915 (1002)
++........ .......||..|+|||++.+ ..++.++||||+||++|||+||++||...
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9876543221 12234568899999998866 45899999999999999999999999754
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=317.07 Aligned_cols=262 Identities=23% Similarity=0.291 Sum_probs=201.9
Q ss_pred HHHHHhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 699 LELCQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 699 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
.++..+.++|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.+++++ +||||+++++++...+.
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 34445678899999999999999999986 468999999986542 2346678899999999 89999999999875432
Q ss_pred -hhHHHHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEe
Q 037042 777 -KALFKALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLS 852 (1002)
Q Consensus 777 -~~~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 852 (1002)
.....++||||+++|+|.++++. ....+++..++.++.|++.|++||| ..+|+||||||+||+++.++.+||+
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEe
Confidence 11245799999999999998864 2335889999999999999999999 8999999999999999999999999
Q ss_pred cccccccccCCCceeeeccCCCCcccccccccCCC-----CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-----RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
|||++........ ......|+..|+|||++... .++.++|||||||++|||++|+.||........ ..
T Consensus 171 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-~~---- 243 (291)
T cd06639 171 DFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-LF---- 243 (291)
T ss_pred ecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-HH----
Confidence 9999886543221 11234678889999986543 368999999999999999999999875322111 10
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
++....... ...++.....+.+++.+||+.+|++||++.|+++|
T Consensus 244 --------~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 244 --------KIPRNPPPT-----LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred --------HHhcCCCCC-----CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 110000000 00112234568999999999999999999999987
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=313.27 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=203.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
..|+..+.||+|+||.||+|... +++.||+|++.... ......+..|+.++++++||||+++++++..+. ..++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~l 79 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT----KLWI 79 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----EEEE
Confidence 35777889999999999999865 58899999987543 345677889999999999999999999998776 6789
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++|+|.+++... .+++.++..++.|++.|++|+| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 80 IMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 99999999999998654 4788899999999999999999 899999999999999999999999999999766443
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......++..|+|||+..+..++.++|||||||++|||++|..||........ . ........
T Consensus 155 ~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~---------~~~~~~~~ 218 (277)
T cd06640 155 QI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----L---------FLIPKNNP 218 (277)
T ss_pred cc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----h---------hhhhcCCC
Confidence 21 11234578889999998888899999999999999999999999875322110 0 00000000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
......++..+.+++.+||+.+|++||++.++++|-.
T Consensus 219 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 219 ------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred ------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 0112235677899999999999999999999998844
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=312.18 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=195.6
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|+..+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++......
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-- 79 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEK-- 79 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCC--
Confidence 3688899999999999999975 468999999886432 22346688899999999999999999988653211
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++++||+++++|.+++...+ .+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 80 ~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 80 TLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 3468999999999999997654 4788899999999999999999 89999999999999999999999999999976
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .......++..|+|||++.+..++.++||||+||++|||++|+.||...... .. +.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~----~~---------~~~~~ 222 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM----AA---------IFKIA 222 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH----HH---------HHHHh
Confidence 5432111 1112345788999999998888999999999999999999999999753211 10 01110
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.... .. ..+......+.+++ .||..+|++||+++|+++|
T Consensus 223 ~~~~-~~-----~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 223 TQPT-NP-----QLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred cCCC-CC-----CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 0000 00 01122345567777 6888999999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=309.69 Aligned_cols=246 Identities=26% Similarity=0.466 Sum_probs=197.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.+|++.+.||+|+||.||+|.. +++.||+|.+.... ....+.+|+.++++++||||+++++++.... .++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-----LYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-----cEEEE
Confidence 4588899999999999999975 57889999986543 3467889999999999999999999986543 47999
Q ss_pred ccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 786 EYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||+++++|.+++..... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~ 154 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV 154 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence 99999999999976543 5789999999999999999999 8999999999999999999999999999987543221
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.....+..|+|||++.++.++.++|||||||++|||++ |+.||...... .+... +.+ . ..
T Consensus 155 -----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~-----~~~---~-~~ 215 (254)
T cd05083 155 -----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-----EVKEC-----VEK---G-YR 215 (254)
T ss_pred -----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-----HHHHH-----HhC---C-CC
Confidence 22334567999999888889999999999999999998 99998653221 11110 000 0 00
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
. ..+..++..+.+++.+||+.+|++||+++++++.|++
T Consensus 216 ~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 216 M------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred C------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0 0112345678899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=346.91 Aligned_cols=256 Identities=20% Similarity=0.247 Sum_probs=197.2
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
..++|.+.+.||+|+||+||+|+.. ++..||+|++... .......+..|+.++++++|||||+++++|...... .
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~--~ 88 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ--K 88 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC--E
Confidence 4568999999999999999999854 5788999998643 233456788999999999999999999988654321 4
Q ss_pred HHHhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCC----CCCcEEccCCCCCeeeCC--------
Q 037042 781 KALALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGY----STPVIHCDLKPSNVLLGD-------- 845 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~----~~~iiHrDlkp~NILl~~-------- 845 (1002)
.++||||+++|+|.+++... ...+++..++.|+.||+.||+|||... ..+||||||||+|||++.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 57999999999999998753 235899999999999999999999421 156999999999999964
Q ss_pred ---------CCcEEEecccccccccCCCceeeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 846 ---------NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 846 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
.+.+||+|||++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 34599999999986643321 234568999999998754 4589999999999999999999999965
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
... ...++...... +... ....+..+.++|..||..+|.+||++.|++++
T Consensus 246 ~~~----~~qli~~lk~~-------p~lp---------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 246 ANN----FSQLISELKRG-------PDLP---------IKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred CCc----HHHHHHHHhcC-------CCCC---------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 321 11111111000 0000 01124568899999999999999999999965
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=308.19 Aligned_cols=250 Identities=24% Similarity=0.330 Sum_probs=199.4
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+..|++++++++|+|++++++.+...+ ...++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~l 77 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED---GLLYI 77 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC---CEEEE
Confidence 4888899999999999999854 57899999986432 234567888999999999999999998775332 13579
Q ss_pred hhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+++++|.+++.... ..+++.++..++.+++.|++||| +.+|+||||||+||+++.++.++|+|||++..+..
T Consensus 78 v~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 78 VMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred EecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 999999999999987643 35899999999999999999999 89999999999999999999999999999986643
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......+++.|+|||+..+..++.++||||+||+++||++|+.||..... ..+... +.....
T Consensus 155 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~--------~~~~~~ 219 (257)
T cd08223 155 QCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYR--------IIEGKL 219 (257)
T ss_pred cCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHH--------HHhcCC
Confidence 221 11334578899999999888899999999999999999999999864321 111111 111111
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.. .+...+..+.+++.+|++.+|++||++.++++|
T Consensus 220 ~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 PP-------MPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CC-------CccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 112345678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=311.73 Aligned_cols=255 Identities=23% Similarity=0.349 Sum_probs=197.7
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc----------chhHHHHHHHHHHHHhccCCCcceeeeEEecCc
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC----------GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1002)
+|...+.||+|+||.||+|.. .+|+.||+|.++... ....+.+..|+.++++++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 477789999999999999975 468999999875321 112356788999999999999999999988766
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
..++||||+++++|.+++.... .+++..+..++.||+.|+.||| +.+++||||||+||+++.++.++++|||
T Consensus 82 ----~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 82 ----YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred ----ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecc
Confidence 6689999999999999997764 5888999999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCCC--cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEGR--VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
+++...............++..|+|||...... ++.++||||||+++||+++|..||..... ...+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~------- 222 (272)
T cd06629 154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAMF------- 222 (272)
T ss_pred ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHHH-------
Confidence 997654322111123345788999999876654 78999999999999999999999864211 11111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
++.......... ......++..+.+++.+||.++|++||++.++++|
T Consensus 223 --~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 223 --KLGNKRSAPPIP--PDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred --HhhccccCCcCC--ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 110000000000 00112345678999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=316.57 Aligned_cols=263 Identities=21% Similarity=0.283 Sum_probs=202.0
Q ss_pred CHHHHHHhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 697 SYLELCQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 697 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
+..++......|+..+.||+|+||.||+|+. .+++.||+|++.... .....+..|+.+++++ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 3444445667899999999999999999985 468899999986543 2345688899999998 699999999988542
Q ss_pred ch--hhHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 775 DF--KALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 775 ~~--~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
.. .....++||||+++|+|.+++.... ..+++..+..++.||++|++||| +.+|+||||||+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence 21 1124579999999999999987643 35788888999999999999999 899999999999999999999999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~ 926 (1002)
+|||++........ ......|+..|+|||++. ...++.++|||||||++|||++|+.||........
T Consensus 163 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~------ 234 (282)
T cd06636 163 VDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA------ 234 (282)
T ss_pred eeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh------
Confidence 99999876543221 123356888999999865 34688899999999999999999999965322110
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
...+....... .....++..+.+++.+||+.+|++||++.|+++|
T Consensus 235 -------~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 235 -------LFLIPRNPPPK------LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred -------hhhHhhCCCCC------CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 00000000000 0011245679999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=311.40 Aligned_cols=254 Identities=22% Similarity=0.257 Sum_probs=204.4
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.... ..++|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv 77 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG----DISIC 77 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC----EEEEE
Confidence 5777889999999999999865 68999999987653 344567889999999999999999999987765 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+||+++++|.+++......++...+..++.|+++|++|+| + .+++||||||+||++++++.++|+|||.+......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 9999999999999876556889999999999999999999 7 99999999999999999999999999998765432
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ....++..|+|||+..+..++.++|||||||++|+|++|+.||................. ......
T Consensus 155 ~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~ 222 (265)
T cd06605 155 LA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI--------VNEPPP 222 (265)
T ss_pred Hh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHH--------hcCCCC
Confidence 21 125678889999999888999999999999999999999999976433222222222111 111000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.. .....+..+.+++.+||..+|++|||+.|++++-
T Consensus 223 ~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 258 (265)
T cd06605 223 RL------PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHP 258 (265)
T ss_pred CC------ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCc
Confidence 00 0111456688999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=313.87 Aligned_cols=270 Identities=20% Similarity=0.269 Sum_probs=198.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|.+..... .....+.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~ 79 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK----TLT 79 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC----eEE
Confidence 367899999999999999999865 689999999875432 22345678999999999999999999998766 678
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 80 lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 80 LVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 99999985 999998776667899999999999999999999 89999999999999999999999999999875432
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--h----hh
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--S----IM 935 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~----~~ 935 (1002)
... ......++..|+|||+..+ ..++.++||||+||++|||++|+.||.................... . ..
T Consensus 156 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 156 PSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred CCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence 211 1123346788999998765 4578999999999999999999999965432111111110000000 0 00
Q ss_pred h---cccCc--cCChhhhHHH-hHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 936 K---IVDGS--LLSREDIQFV-AKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 936 ~---i~~~~--~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. ..... .......... ........+.+++.+|++++|++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0 00000 0000000000 000111567899999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=292.49 Aligned_cols=270 Identities=20% Similarity=0.209 Sum_probs=210.4
Q ss_pred hhcCCCCC-ceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 704 ATDGFSEN-NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 704 ~~~~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.+++|++. ++||-|-.|.|.... ..+|+.+|+|++... ...++|++..-.. .|||||.++++|.........
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45666654 578999999999886 457999999998643 4457788875544 699999999988654433334
Q ss_pred HHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEecccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGI 856 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGl 856 (1002)
..+|||.|+||.|...++..+. .+++.++..|+.||+.|+.||| +..|+||||||+|+|.+ .+..+|++|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccccc
Confidence 5689999999999999987655 7899999999999999999999 99999999999999996 467899999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
|+.-.... .....+-|+.|.|||++...+|+...|+||+||++|-|++|.+||+.......... + -.+
T Consensus 211 AK~t~~~~---~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispg--M-------k~r 278 (400)
T KOG0604|consen 211 AKETQEPG---DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--M-------KRR 278 (400)
T ss_pred ccccCCCc---cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChh--H-------HhH
Confidence 98755432 33456789999999999999999999999999999999999999988654322110 0 012
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCCC
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGYP 997 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~~ 997 (1002)
|..+....+.. .+...++...++|+.++..+|.+|.|+.|++.|-+--.....+..|
T Consensus 279 I~~gqy~FP~p----EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tp 335 (400)
T KOG0604|consen 279 IRTGQYEFPEP----EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTP 335 (400)
T ss_pred hhccCccCCCh----hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCC
Confidence 22222222221 2345678899999999999999999999999998765555555444
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=310.92 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=197.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++.+....
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-- 79 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMER-- 79 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCc--
Confidence 46888999999999999999854 68999999886321 22346788899999999999999999988654311
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++++|.+++.... .+++....+++.|++.||+||| +.+|+|+||||+||+++.++.++|+|||+++.
T Consensus 80 ~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 80 TLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred eEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 3468999999999999987654 4788889999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .......++..|+|||+..+..++.++|||||||++|||++|+.||...... ... .+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~---------~~~~ 222 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAI---------FKIA 222 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHH---------HHHh
Confidence 5432111 1122345888999999988888999999999999999999999998753111 100 0100
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.... ....+......+.+++.+|+. +|++||+++|+++|-
T Consensus 223 ~~~~------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 223 TQPT------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred cCCC------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 0000 001122345668889999985 899999999999763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=308.40 Aligned_cols=249 Identities=21% Similarity=0.316 Sum_probs=201.1
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+++. .+|+.||+|++... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~l 76 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG----NLYI 76 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC----eEEE
Confidence 478889999999999999975 46899999998643 2334567889999999999999999999987766 6689
Q ss_pred hhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
|+||+++++|.+++..... .+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 77 VMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence 9999999999999876432 5788999999999999999999 89999999999999999999999999999976644
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.... .....|+..|+|||+..+..++.++|||||||+++||++|+.||.... ....+. ++..+..
T Consensus 154 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~--------~~~~~~~ 218 (256)
T cd08218 154 TVEL--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLVL--------KIIRGSY 218 (256)
T ss_pred chhh--hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHHH--------HHhcCCC
Confidence 3221 123457888999999988889999999999999999999999986521 111111 1111111
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.. .+......+.+++.+||+.+|++||++.||++|
T Consensus 219 ~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 219 PP-------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CC-------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 00 112335678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=309.20 Aligned_cols=263 Identities=23% Similarity=0.241 Sum_probs=202.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||.|++|.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++...... ..++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~--~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSS--SIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCC--eEEE
Confidence 36788899999999999999864 689999999875432 3457788999999999999999999988654322 3579
Q ss_pred hhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
||||+++++|.+++.. ....++...+..++.|+++|++||| +.+++|+||+|+||+++.++.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 9999999999988653 2335788899999999999999999 899999999999999999999999999998765
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ....++..|+|||...+..++.++||||+||++|||++|+.||...........+............+.+.
T Consensus 156 ~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd06621 156 VNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDE 231 (287)
T ss_pred ccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccC
Confidence 43221 23456788999999988899999999999999999999999998653221111121111111000000000
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. .....+..+.+++.+||..+|++|||+.|+++|-+
T Consensus 232 -----~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 232 -----PG----NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred -----CC----CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 00 00112456889999999999999999999999755
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=310.91 Aligned_cols=267 Identities=21% Similarity=0.265 Sum_probs=202.2
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++||||+++++++..+. ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~~ 76 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS----GFVL 76 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC----eeEE
Confidence 4788899999999999999864 68999999987543 334577889999999999999999999988766 6689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+||+ +++|.+++......+++.+++.++.||++|++||| +.+|+|+||||+||+++.++.++|+|||++......
T Consensus 77 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 77 VMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred Eeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 99999 99999999776667899999999999999999999 899999999999999999999999999999876543
Q ss_pred CceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh------hhhh
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI------SIMK 936 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~------~~~~ 936 (1002)
.. .......++..|+|||++.+. .++.++||||+||+++||++|++||...... ..+.......... ...+
T Consensus 153 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 153 EP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred CC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCChHHHhhccC
Confidence 32 122345688899999987654 4689999999999999999998877543211 1111111100000 0000
Q ss_pred ccc--CccCC---hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 937 IVD--GSLLS---REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 937 i~~--~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..+ ..... ...... ..+.....+.+++.+|++++|++||+++++++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 231 LPDYNKITFPESKPIPLEE-IFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cchhhcccCCCCCcchHHH-hCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 00000 000000 112335788999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=309.20 Aligned_cols=248 Identities=25% Similarity=0.316 Sum_probs=199.5
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
+|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++..+. .
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~ 76 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED----N 76 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC----e
Confidence 4777899999999999999865 78999999886532 234577889999999999999999999987765 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++|+||+++++|.+++.... .+++..+..++.|+++|++||| +.+|+|+||+|+||+++.++.+||+|||++...
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 77 LYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred EEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceec
Confidence 689999999999999997654 4789999999999999999999 899999999999999999999999999998765
Q ss_pred cCCCceeeeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
.... ......++..|+|||...... ++.++|+|||||++|+|++|+.||...... ...... ...
T Consensus 153 ~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~-----~~~-- 217 (258)
T cd06632 153 VEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV-----AAVFKI-----GRS-- 217 (258)
T ss_pred cccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH-----HHHHHH-----Hhc--
Confidence 4332 123456888899999877666 899999999999999999999998764211 100000 000
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.... ..+......+.+++.+||+.+|++||++.+++++
T Consensus 218 ~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 218 KELP-------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ccCC-------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 0000 0111234667899999999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=308.53 Aligned_cols=257 Identities=25% Similarity=0.329 Sum_probs=203.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||.|+||+||+|... ++..||+|++.... ....+.+.+|+++++.++|+||+++++.+...+ ..++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~i 76 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD----ELWL 76 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC----EEEE
Confidence 46889999999999999999854 68899999987542 335678899999999999999999999887766 5679
Q ss_pred hhccCCCCChhHhhhccC--CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSN--YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|+||+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++..+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~ 153 (267)
T cd06610 77 VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLA 153 (267)
T ss_pred EEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence 999999999999997642 35889999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCcee--eeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 862 REDQFV--TQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 862 ~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
...... ......|+..|+|||++... .++.++|||||||++|||++|+.||........ ...... . .
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~--------~-~ 223 (267)
T cd06610 154 DGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-LMLTLQ--------N-D 223 (267)
T ss_pred cCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-HHHHhc--------C-C
Confidence 443221 11234578899999987776 789999999999999999999999975422111 111000 0 0
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.+..... ......+..+.+++.+||..+|++||++.|+++|
T Consensus 224 ~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 224 PPSLETG-----ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCCcCCc-----cccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000000 0012345678999999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=320.99 Aligned_cols=284 Identities=20% Similarity=0.180 Sum_probs=206.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++..........
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367999999999999999999854 69999999987542 234566778999999999999999999876544333356
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+. |+|.+++...+. +++..+..++.||++||+||| .++|+||||||+||++++++.+||+|||++....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQP-LTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhh-hhHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 79999995 589999876544 899999999999999999999 8999999999999999999999999999997654
Q ss_pred CCCce--eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH-----------
Q 037042 862 REDQF--VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN----------- 927 (1002)
Q Consensus 862 ~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~----------- 927 (1002)
..... .......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLILSVLGSPSEEVLN 237 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH-HHHHHHHHhCCChhHhhh
Confidence 32211 11234568889999998755 458999999999999999999999996532110 0000000
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
......+.+..+.................+..+.+++.+||+.+|++||++++++.|-+--+-.+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~ 304 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD 304 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence 0000001110000000000000001122457799999999999999999999999986644433333
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=312.78 Aligned_cols=251 Identities=27% Similarity=0.352 Sum_probs=203.1
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+|...+.||+|+||.||+|.. .+++.||+|.+........+.+..|+.++++++||||+++++++...+ ..++|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~~~lv 94 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD----ELWVV 94 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC----cEEEE
Confidence 5788899999999999999975 468899999987555555677889999999999999999999988766 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
+||+++++|.+++.+. .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 95 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred EecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 9999999999998754 3788899999999999999999 8999999999999999999999999999987655433
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......+++.|+|||......++.++|||||||++||+++|+.||........ ...+......
T Consensus 170 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-------------~~~~~~~~~~- 233 (293)
T cd06647 170 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-------------LYLIATNGTP- 233 (293)
T ss_pred c--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-------------eeehhcCCCC-
Confidence 2 12334688899999998888899999999999999999999999975322111 0000000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
....+...+..+.+++.+||..+|++||++.+++.|-
T Consensus 234 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 234 ----ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred ----CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 0001222445688999999999999999999999983
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=289.52 Aligned_cols=269 Identities=21% Similarity=0.282 Sum_probs=209.8
Q ss_pred CHHHHHHhhcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 697 SYLELCQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 697 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
.+.+..+.++ +.||+|+|+.|--+. +.+|.+||||++.+........+.+|++++.++ .|+||++++++|.++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 3566666665 689999999998875 778999999999998888889999999999999 599999999999887
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC---CcEEE
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN---MVAHL 851 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl 851 (1002)
+ ..|+|||.|.||+|...+++.+. +.+.++.++.++||.||.+|| .+||+|||+||+|||..+. --|||
T Consensus 149 ~----~FYLVfEKm~GGplLshI~~~~~-F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 149 T----RFYLVFEKMRGGPLLSHIQKRKH-FNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred c----eEEEEEecccCchHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceee
Confidence 7 66899999999999999988765 888899999999999999999 9999999999999999654 34899
Q ss_pred ecccccccccCCC-----ceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccc---
Q 037042 852 SDFGITKLLTRED-----QFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE--- 918 (1002)
Q Consensus 852 ~DfGla~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~--- 918 (1002)
|||.+..-+.... ....-...+|+-.|||||+.. .-.|+.+.|.||+|||+|-|++|.+||.+.-.+
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 9998875433221 111223456888899999642 235899999999999999999999999775332
Q ss_pred --cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 919 --GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 919 --~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
......-..... +..|.++....+.. .+..++.+..+++...+..++..|.++.+++.|-
T Consensus 301 WdrGe~Cr~CQ~~L---FesIQEGkYeFPdk----dWahIS~eakdlisnLlvrda~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKL---FESIQEGKYEFPDK----DWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHP 362 (463)
T ss_pred ccCCCccHHHHHHH---HHHHhccCCcCChh----hhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCc
Confidence 111111111111 22333443332221 2345677888999999999999999999999853
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=314.31 Aligned_cols=251 Identities=24% Similarity=0.335 Sum_probs=199.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
..|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----~~ 90 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH----TA 90 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC----eE
Confidence 45888899999999999999864 68999999986432 233467889999999999999999999998766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++|+||++ |++.+++......+++..+..++.|++.|+.||| +.+|+||||+|+||++++++.+||+|||++....
T Consensus 91 ~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 91 WLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred EEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 79999997 5787777665556899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCCceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
.. ....++..|+|||++. ...++.++|||||||++|||++|+.||........ . ..+.
T Consensus 167 ~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-----~--------~~~~ 227 (307)
T cd06607 167 PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----L--------YHIA 227 (307)
T ss_pred CC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-----H--------HHHh
Confidence 32 2345778899999864 45688999999999999999999999865321110 0 0000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
...... .....++..+.+++.+||+.+|++||++.++++|.+-.+
T Consensus 228 ~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 228 QNDSPT------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred cCCCCC------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 000000 011224567899999999999999999999999866443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=312.78 Aligned_cols=268 Identities=21% Similarity=0.260 Sum_probs=200.1
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch-----hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR-----AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
+|+..+.||+|+||.||+|... +|+.||||++...... ....+..|++++++++|+||+++++++...+ .
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~ 76 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS----N 76 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC----E
Confidence 4777889999999999999864 6899999998754322 3456778999999999999999999998755 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+ +|+|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 77 ~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~ 152 (298)
T cd07841 77 INLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSF 152 (298)
T ss_pred EEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence 68999999 88999999776546899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh-------
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI------- 932 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~------- 932 (1002)
..... ......++..|+|||.+.+ ..++.++|||||||++|||++|.+||...... ..+..........
T Consensus 153 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 153 GSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred cCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHcCCCchhhhhh
Confidence 54322 1123356778999998754 45789999999999999999998777653221 1111111100000
Q ss_pred --hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 --SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 --~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
................. .........+.+++.+||+++|++|||+.|+++|=+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~ 284 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLK-QIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284 (298)
T ss_pred cccccccccccccCCcchh-hhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcc
Confidence 00000000000000000 011234567899999999999999999999999743
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=313.80 Aligned_cols=264 Identities=22% Similarity=0.302 Sum_probs=199.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|+..+.||+|+||.||+|... +++.||+|++.+.. ....+.+.+|+++++.++||||+++++++..++ ..+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 76 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK----RLY 76 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCC----eEE
Confidence 36888899999999999999875 58999999886532 223567888999999999999999999997665 668
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|+||++++++.++..... .+++..+..++.||++|++||| +.+|+||||+|+||++++++.++|+|||++.....
T Consensus 77 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 77 LVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred EEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 9999999999988775543 4899999999999999999999 88999999999999999999999999999986644
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh-----hhhhh
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL-----ISIMK 936 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~-----~~~~~ 936 (1002)
... ......++..|+|||+..+ ..++.++|||||||++|||++|++||...... ..+...... ....+
T Consensus 153 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07846 153 PGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI----DQLYHIIKCLGNLIPRHQE 226 (286)
T ss_pred Ccc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH----HHHHHHHHHhCCCchhhHH
Confidence 322 1223457888999998765 44788999999999999999999998643211 111110000 00000
Q ss_pred ------cc----cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 937 ------IV----DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 937 ------i~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+. .+......... ...+..+..+.+++.+||+.+|++||++.++++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 227 IFQKNPLFAGMRLPEVKEIEPLE-KRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhccchHhhccccccccCcchHH-HhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00 00000000000 0112346779999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=317.26 Aligned_cols=253 Identities=25% Similarity=0.320 Sum_probs=201.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc---hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||+||+|... +++.||+|.+..... ...+.+..|++++++++||||+++++++..+. ..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~ 76 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET----YL 76 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC----EE
Confidence 36888899999999999999865 589999999876432 24567888999999999999999999987766 56
Q ss_pred HHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
++||||+.+++|.+++.... ..+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 153 (316)
T cd05574 77 CLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQS 153 (316)
T ss_pred EEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence 89999999999999987643 36889999999999999999999 899999999999999999999999999998755
Q ss_pred cCCCcee---------------------------eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCc
Q 037042 861 TREDQFV---------------------------TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTN 913 (1002)
Q Consensus 861 ~~~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~ 913 (1002)
....... ......||..|+|||+..+..++.++|||||||++|+|++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 154 DVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred cccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 3221100 0112357889999999988889999999999999999999999997
Q ss_pred ccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC----HHHHHHH
Q 037042 914 EIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN----AKEIVTR 984 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt----~~evl~~ 984 (1002)
....... ..++......... ....+..+.+++.+||..+|++||+ ++|+++|
T Consensus 234 ~~~~~~~-------------~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 234 GSNRDET-------------FSNILKKEVTFPG------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred CCchHHH-------------HHHHhcCCccCCC------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 5432211 1111111111110 1114567999999999999999999 8888876
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=314.89 Aligned_cols=250 Identities=23% Similarity=0.306 Sum_probs=198.6
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
|.....||+|+||.||+|... ++..||||.+........+.+.+|+.++++++||||+++++++..++ ..++|||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~----~~~lv~e 99 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD----ELWVVME 99 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC----eEEEEEe
Confidence 444467999999999999854 68899999987655555677889999999999999999999988766 6689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++++|.+++... .+++..+..++.||+.|++||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 100 ~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~- 173 (292)
T cd06658 100 FLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP- 173 (292)
T ss_pred CCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-
Confidence 99999999988554 3788999999999999999999 88999999999999999999999999999876543221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......|+..|+|||+..+..++.++|||||||++|||++|+.||...... .. ... +..........
T Consensus 174 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~-~~~-----~~~~~~~~~~~-- 240 (292)
T cd06658 174 -KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL----QA-MRR-----IRDNLPPRVKD-- 240 (292)
T ss_pred -cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HH-HHH-----HHhcCCCcccc--
Confidence 112345788999999988888999999999999999999999998653211 00 000 11111111100
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.......+.+++.+||..+|.+|||++|++++-.
T Consensus 241 ------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~ 274 (292)
T cd06658 241 ------SHKVSSVLRGFLDLMLVREPSQRATAQELLQHPF 274 (292)
T ss_pred ------ccccCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence 1123456889999999999999999999998843
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=320.39 Aligned_cols=276 Identities=25% Similarity=0.323 Sum_probs=202.2
Q ss_pred CCCCCceeeccCcceEEEEE-eCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~~~ 782 (1002)
.|...+.||+||||.||+|+ ..+|+.||||.+++.. ....+..-+|+++|++++|||||+++++-..... ......
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 35566889999999999999 5579999999998643 3345777889999999999999999987544330 012346
Q ss_pred HhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee--CCCC--cEEEecccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL--GDNM--VAHLSDFGI 856 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl--~~~~--~~kl~DfGl 856 (1002)
+|||||.||+|+..+.+... .+++.+.+.+..+++.||.||| .++||||||||.||++ +.+| ..||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 99999999999999987654 6999999999999999999999 9999999999999998 3334 489999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccC-CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHH-HHHHHHHhhh-
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGS-EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLK-HWVNDWLLIS- 933 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~-~~~~~~~~~~- 933 (1002)
|+..+++.. ....+||..|++||+.. .+.|+..+|.|||||++||++||..||.....+..... .|........
T Consensus 171 Arel~d~s~---~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 171 ARELDDNSL---FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred cccCCCCCe---eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 999887653 35678999999999887 48899999999999999999999999987544432111 1221111111
Q ss_pred hhhcccC----ccCChhhhHH--HhHHHHHHHHHHHHhHccccCCCCCC--CHHHHHHHHHhh
Q 037042 934 IMKIVDG----SLLSREDIQF--VAKEQCMSFVFNMAMECTVESPEKRI--NAKEIVTRLLKI 988 (1002)
Q Consensus 934 ~~~i~~~----~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~P~~Rp--t~~evl~~L~~i 988 (1002)
....... .......... .-.......+-+.+..++..+|++|. .+.+....+..|
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 1111111 1111111110 01122344566777788899999998 665555554443
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=310.32 Aligned_cols=252 Identities=25% Similarity=0.321 Sum_probs=192.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHH-HHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEV-MKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|++.+.||+|+||.||+|+.. +|+.||+|+++... ......+..|+.. ++..+||||+++++++...+ ..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~----~~~ 76 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG----DVW 76 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC----cEE
Confidence 36888899999999999999865 69999999987643 2233455556665 56678999999999998766 568
Q ss_pred HhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 783 LALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
+||||++ |+|.+++.. .+..+++..+..++.||+.|++||| ++ +++||||||+||+++.++.+||+|||++.
T Consensus 77 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 77 ICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred EEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 9999996 588877754 2336899999999999999999999 66 89999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCC----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSE----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
...... ......++..|+|||++.+ ..++.++|+|||||++|||++|+.||........ . +
T Consensus 153 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~---------~ 217 (283)
T cd06617 153 YLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ---Q---------L 217 (283)
T ss_pred cccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH---H---------H
Confidence 654321 1133457888999998754 4578999999999999999999999865322111 1 1
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+........ .....+..+.+++.+||..+|++||++.++++|-.
T Consensus 218 ~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 263 (283)
T cd06617 218 KQVVEEPSPQL------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPF 263 (283)
T ss_pred HHHHhcCCCCC------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence 11111100000 01123467889999999999999999999998744
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=311.89 Aligned_cols=246 Identities=23% Similarity=0.270 Sum_probs=200.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..+.||+|+||.||+|... +++.||+|++.+.. ....+.+.+|++++++++||||+++++++..+. ..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~ 76 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS----NL 76 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC----eE
Confidence 36888899999999999999865 68999999987532 234567888999999999999999999998766 66
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++++|.+++...+ .++...+..++.|+++||+||| +.+|+||||+|+||+++.++.+||+|||++....
T Consensus 77 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 77 YLVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred EEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 89999999999999997764 5889999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.. .....+++.|+|||...+..++.++||||||+++|||++|+.||...... .. ...+....
T Consensus 153 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~--------~~~~~~~~ 214 (290)
T cd05580 153 GR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI-----QI--------YEKILEGK 214 (290)
T ss_pred CC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-----HH--------HHHHhcCC
Confidence 43 13446888999999988888899999999999999999999998653311 00 01111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRL 985 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L 985 (1002)
... +......+.+++.+||..+|.+|+ +++|+++|-
T Consensus 215 ~~~--------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~ 255 (290)
T cd05580 215 VRF--------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHP 255 (290)
T ss_pred ccC--------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCc
Confidence 111 112245688999999999999999 888888764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=309.34 Aligned_cols=257 Identities=24% Similarity=0.295 Sum_probs=201.2
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch--hhH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF--KAL 779 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~--~~~ 779 (1002)
..++|+..+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+++++++ +|+||+++++++..... ...
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4578999999999999999999864 688999999876533 346789999999999 79999999999876441 122
Q ss_pred HHHHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++||||+++++|.+++.... ..+++..+..++.|+++|++||| +.+++||||+|+||+++.++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 4579999999999999887533 46899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSE-----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
+........ ......|+..|+|||++.. ..++.++|||||||++|||++|+.||........ .
T Consensus 160 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~--------- 227 (275)
T cd06608 160 SAQLDSTLG--RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA-L--------- 227 (275)
T ss_pred ceecccchh--hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH-H---------
Confidence 876543221 1233468889999998643 3478899999999999999999999965321110 1
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.++....... ...+......+.+++.+||..||++|||+.|+++|
T Consensus 228 ---~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 228 ---FKIPRNPPPT-----LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred ---HHhhccCCCC-----CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1111110000 01112245678899999999999999999999875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=314.27 Aligned_cols=252 Identities=21% Similarity=0.253 Sum_probs=195.8
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+|+..+.||+|+||.||+|+.. .++.||+|.+.... ......+.+|+++++.++||||+++++++..++ ..+
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~ 77 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR----HLC 77 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC----EEE
Confidence 6888899999999999999855 58899999987543 223457788999999999999999999987765 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++...+ .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 78 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 78 MVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 9999999999999997654 4888899999999999999999 89999999999999999999999999999863211
Q ss_pred CCc-------------eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH
Q 037042 863 EDQ-------------FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 863 ~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
... ........++..|+|||.+.+..++.++|+|||||++|||++|+.||..... .++....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----~~~~~~~ 228 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFGQV 228 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 000 0011224578889999998888899999999999999999999999864321 1111111
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH---HHHHHH
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA---KEIVTR 984 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~---~evl~~ 984 (1002)
... ...... .....+..+.+++.+||+.+|++||++ .+++++
T Consensus 229 ~~~--------~~~~~~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 229 ISD--------DIEWPE-----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred Hhc--------ccCCCC-----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 100 000000 001235668999999999999999985 555555
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=315.47 Aligned_cols=250 Identities=23% Similarity=0.307 Sum_probs=198.3
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
|+....||+|+||.||+|... +++.||+|++........+.+.+|+.+++.++||||+++++++..++ ..++|+|
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~~~iv~e 98 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE----ELWVLME 98 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCC----eEEEEEe
Confidence 334457999999999999854 68999999987654445667889999999999999999999988766 5689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~- 172 (297)
T cd06659 99 FLQGGALTDIVSQT--RLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP- 172 (297)
T ss_pred cCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-
Confidence 99999999987553 4789999999999999999999 89999999999999999999999999999875543221
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........ . .. +.........
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~----~~-----~~~~~~~~~~--- 238 (297)
T cd06659 173 -KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-M----KR-----LRDSPPPKLK--- 238 (297)
T ss_pred -cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H----HH-----HhccCCCCcc---
Confidence 12334688899999999888899999999999999999999999865321110 0 00 0000000000
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
........+.+++.+||+.+|++||++.|++++-.
T Consensus 239 -----~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~ 273 (297)
T cd06659 239 -----NAHKISPVLRDFLERMLTREPQERATAQELLDHPF 273 (297)
T ss_pred -----ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChh
Confidence 01123456889999999999999999999999754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=307.17 Aligned_cols=252 Identities=23% Similarity=0.329 Sum_probs=197.9
Q ss_pred CCCCCceeeccCcceEEEEEeCC--CcEEEEEEeecc----------cchhHHHHHHHHHHHHh-ccCCCcceeeeEEec
Q 037042 707 GFSENNLIGRGGFGSVYKARIQD--GMEVAVKVFNQQ----------CGRAFKSFDVECEVMKS-IRHRNIIKIISCCSI 773 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 773 (1002)
+|++.+.||+|+||.||+|.... ++.||+|.+... .......+..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999998654 788999987532 12234556778888875 799999999999887
Q ss_pred CchhhHHHHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEE
Q 037042 774 GDFKALFKALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH 850 (1002)
Q Consensus 774 ~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 850 (1002)
.+ ..++||||+++++|.+++.. ....+++..++.++.|++.|+.|||. ..+++||||||+||+++.++.+|
T Consensus 81 ~~----~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~ 154 (269)
T cd08528 81 ND----RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVT 154 (269)
T ss_pred CC----eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEE
Confidence 66 56899999999999988753 33468889999999999999999992 36899999999999999999999
Q ss_pred EecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 851 LSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 851 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
|+|||.+....... ......|+..|+|||+..+..++.++|||||||++|||++|+.||...... ....
T Consensus 155 l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-----~~~~--- 223 (269)
T cd08528 155 ITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-----SLAT--- 223 (269)
T ss_pred Eecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-----HHHH---
Confidence 99999998755433 224456888999999998888999999999999999999999998653211 1111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+.+...... .....+..+.+++.+||+.+|++||++.|+..+++
T Consensus 224 -----~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 224 -----KIVEAVYEPL------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -----HHhhccCCcC------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111111000 00123456889999999999999999999999885
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=315.00 Aligned_cols=272 Identities=21% Similarity=0.252 Sum_probs=198.3
Q ss_pred CCCCCceeeccCcceEEEEEeC---CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
+|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++...... .
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~--~ 78 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADK--S 78 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCc--e
Confidence 4778899999999999999854 47899999988632 34456778899999999999999999999876211 5
Q ss_pred HHHhhccCCCCChhHhhhccC----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC----CCcEEEe
Q 037042 781 KALALEYMPHGSLEKYLYSSN----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD----NMVAHLS 852 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~----~~~~kl~ 852 (1002)
.++||||+++ ++.+++.... ..++...+..++.||+.|++||| +.+|+||||||+||+++. ++.+||+
T Consensus 79 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~ 154 (316)
T cd07842 79 VYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIG 154 (316)
T ss_pred EEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEEC
Confidence 6799999975 6766664321 25788899999999999999999 899999999999999999 9999999
Q ss_pred cccccccccCCCc-eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccc--------cH
Q 037042 853 DFGITKLLTREDQ-FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM--------TL 922 (1002)
Q Consensus 853 DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~--------~~ 922 (1002)
|||++........ ........++..|+|||+..+. .++.++|||||||+++||++|+.||........ .+
T Consensus 155 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
T cd07842 155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQL 234 (316)
T ss_pred CCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHH
Confidence 9999987644322 1122344678899999987664 578999999999999999999999976433220 01
Q ss_pred HHHHHHHH------------hhhhhh---cccCccCChhhhHHHhHH--HHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 923 KHWVNDWL------------LISIMK---IVDGSLLSREDIQFVAKE--QCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 923 ~~~~~~~~------------~~~~~~---i~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..++.... ...... .................. .....+.+++.+|++++|++|||+.|+++|
T Consensus 235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 235 ERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11110000 000000 000000000111111111 344678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=306.77 Aligned_cols=254 Identities=23% Similarity=0.320 Sum_probs=199.6
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc------chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC------GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
+|+..+.||+|+||.||+|+. .+++.||+|++.... ....+.+..|+.++++++|+||+++++++...+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS---- 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC----
Confidence 478889999999999999984 578999999986432 123567889999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEecccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITK 858 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~ 858 (1002)
..++|+||+++++|.+++...+ .+++..+..++.|++.|++||| +++++||||||+||+++.++ .+||+|||.+.
T Consensus 77 ~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~ 152 (268)
T cd06630 77 HFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAA 152 (268)
T ss_pred eEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence 5689999999999999997654 4888999999999999999999 89999999999999998765 69999999997
Q ss_pred cccCCCcee--eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 859 LLTREDQFV--TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 859 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
.+....... ......++..|+|||...+..++.++||||+||+++||++|+.||...... ....... +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~--------~ 222 (268)
T cd06630 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIF--------K 222 (268)
T ss_pred ccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHH--------H
Confidence 765432110 112345788999999988888999999999999999999999998643211 1111110 0
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+...... ...+......+.+++.+|+..+|++||++.|+++|
T Consensus 223 ~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 223 IASATTA------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HhccCCC------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 0000000 00122345678899999999999999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=305.40 Aligned_cols=248 Identities=24% Similarity=0.363 Sum_probs=198.6
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+|.. .+++.||||++.... ......+..|++++++++||||+++++++..++ ..++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~l 76 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK----ALMI 76 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC----EEEE
Confidence 478889999999999999975 468899999987542 334577889999999999999999999887655 5679
Q ss_pred hhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~~~ 861 (1002)
||||+++++|.+++.... ..+++..+..++.++++|++||| +++|+||||||+||+++.+ +.+||+|||.+....
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 77 VMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred EEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 999999999999997653 35889999999999999999999 8999999999999999854 568999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.... .....++..|+|||...+..++.++|||||||++|+|++|+.||...... ..... +....
T Consensus 154 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~~~~--------~~~~~ 217 (256)
T cd08220 154 SKSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----ALVLK--------IMSGT 217 (256)
T ss_pred CCcc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----HHHHH--------HHhcC
Confidence 4322 12345788999999998888999999999999999999999998653211 11111 00000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
... .+...+..+.+++.+||+.+|++|||+.|+++|
T Consensus 218 ~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 218 FAP-------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCC-------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 000 011234668899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=313.35 Aligned_cols=263 Identities=20% Similarity=0.305 Sum_probs=185.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC----CcEEEEEEeecccchhH-----------HHHHHHHHHHHhccCCCcceeee
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFNQQCGRAF-----------KSFDVECEVMKSIRHRNIIKIIS 769 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~ 769 (1002)
..+|.+.++||+|+||+||+|+..+ +..+|+|+......... .....+...++.++|++|+++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3579999999999999999998653 45677776432221110 11122334456678999999999
Q ss_pred EEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcE
Q 037042 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVA 849 (1002)
Q Consensus 770 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~ 849 (1002)
++........+.++++|++.. ++.+.+.... ..++..+..++.|+++|++||| +++|+||||||+|||++.++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcE
Confidence 776544222233466676633 6666655432 2567788899999999999999 8999999999999999999999
Q ss_pred EEecccccccccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHH
Q 037042 850 HLSDFGITKLLTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~ 924 (1002)
+|+|||+|+.+....... ......||+.|+|||+..+..++.++||||+||++|||++|+.||............
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 999999998764322111 112346999999999999999999999999999999999999999765222111111
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...+. +..+..+.. ....++..+.+++..|+..+|++||++.++.+.+
T Consensus 246 ~~~~~----~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 246 AKCDF----IKRLHEGKI---------KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hHHHH----HHHhhhhhh---------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 00000 111111100 1123457799999999999999999999999876
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=311.46 Aligned_cols=268 Identities=22% Similarity=0.254 Sum_probs=201.4
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++|+||+++++++..++ ..++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~i 77 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG----RLYL 77 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC----EEEE
Confidence 6888899999999999999865 58899999986532 334577899999999999999999999998765 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||++++.+..+.... ..+++..+..++.||++|++||| ..+|+||||+|+||++++++.+||+|||++......
T Consensus 78 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 78 VFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred EEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 99999987776655443 45899999999999999999999 899999999999999999999999999999876544
Q ss_pred CceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh--hhhhhcc--
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL--ISIMKIV-- 938 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~i~-- 938 (1002)
... ......++..|+|||+..+. .++.++||||||+++|||++|+.||......+. +......... .......
T Consensus 154 ~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07833 154 PAS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ-LYLIQKCLGPLPPSHQELFSS 231 (288)
T ss_pred ccc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHhhhccc
Confidence 321 11334678889999998887 789999999999999999999999875322110 1000000000 0000000
Q ss_pred cC--------ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 939 DG--------SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 939 ~~--------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
++ ............+..++..+.+++.+||..+|++||++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 232 NPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred CccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00 00001111111222346789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=314.34 Aligned_cols=254 Identities=24% Similarity=0.332 Sum_probs=209.1
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
....|.+.+.||+|.|+.|..|+. .++..||+|.+++.. ......+.+|+++|+.++|||||+++.+..... .
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~----~ 129 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA----T 129 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc----e
Confidence 346799999999999999999984 469999999998763 233455889999999999999999999998776 7
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.|+||||+.+|.+++++...+. ..+..+..++.|+.+|++|+| ++.|||||||++|||++.+.++||+|||++..+
T Consensus 130 lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred eEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceee
Confidence 8899999999999999998876 455888899999999999999 999999999999999999999999999999988
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ...+|++.|.|||++.+.+| ++.+|+||+||++|-|+.|..||++..-. ...+
T Consensus 206 ~~~~~l---qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-----------------~Lr~ 265 (596)
T KOG0586|consen 206 DYGLML---QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-----------------ELRP 265 (596)
T ss_pred cccccc---cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc-----------------cccc
Confidence 755433 45789999999999998887 78999999999999999999999863211 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
+.+........ -......+++++++..+|.+|++.+++.++-+.-.
T Consensus 266 rvl~gk~rIp~----~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 266 RVLRGKYRIPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred hheeeeecccc----eeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 11111111111 12345678899999999999999999999866443
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=306.06 Aligned_cols=253 Identities=27% Similarity=0.369 Sum_probs=200.6
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+|... +++.||+|++..... .....+..|++++++++|+||+++++++...+ ..++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~l 76 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE----KVYI 76 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCC----EEEE
Confidence 4788899999999999999854 689999999876544 36678899999999999999999999887665 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+||+++++|.+++.... .+++..+..++.++++|++||| +.+|+||||+|+||++++++.+||+|||++......
T Consensus 77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 77 FMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred EEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 999999999999997654 4788899999999999999999 899999999999999999999999999999876543
Q ss_pred Cceee--eccCCCCcccccccccCCCC---cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 864 DQFVT--QTQTPATIGYMALEYGSEGR---VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 864 ~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
..... .....++..|+|||++.+.. ++.++||||||+++||+++|+.||........ .... .....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-~~~~--------~~~~~ 223 (264)
T cd06626 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-IMFH--------VGAGH 223 (264)
T ss_pred CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-HHHH--------HhcCC
Confidence 32111 11345788999999987766 89999999999999999999999965321100 0000 00000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..... ....+...+.+++.+||+.+|++||++.|++.+
T Consensus 224 ~~~~~--------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 224 KPPIP--------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCCCC--------cccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 011234567899999999999999999999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=309.00 Aligned_cols=250 Identities=24% Similarity=0.376 Sum_probs=199.3
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc-cchhHHHHHHHHHHHHhcc---CCCcceeeeEEecCchhhHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIR---HRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.|+..+.||+|+||.||+|.. .+++.||+|+++.. .....+.+.+|+.++++++ |||++++++++..+. ..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~----~~ 77 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP----RL 77 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC----EE
Confidence 377788999999999999985 57899999998754 2344567889999999996 999999999987665 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++++|.+++... .+++..+..++.|+++|++||| +.+|+||||+|+||++++++.++|+|||++....
T Consensus 78 ~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 78 WIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 7999999999999998664 5889999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ......|+..|+|||...++ .++.++|||||||++|+|++|+.||...... .+.. .+...
T Consensus 153 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~--------~~~~~ 217 (277)
T cd06917 153 QNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMM--------LIPKS 217 (277)
T ss_pred CCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhh--------ccccC
Confidence 4432 22334688899999987654 4689999999999999999999999753211 1100 00000
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... ......+..+.+++.+||+.+|++||++.|++++-+
T Consensus 218 ~~~~------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~ 257 (277)
T cd06917 218 KPPR------LEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKW 257 (277)
T ss_pred CCCC------CCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChH
Confidence 0000 001113467889999999999999999999998754
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=310.18 Aligned_cols=270 Identities=20% Similarity=0.221 Sum_probs=199.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|+..+.||+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++||||+++++++...+. ...+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~--~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNL--DKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCC--CcEE
Confidence 56888999999999999999865 58899999987443 2233456789999999999999999998876521 1668
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++ +|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99999975 999998876656899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh---------h
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL---------I 932 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~---------~ 932 (1002)
... ......++..|+|||...+. .++.++||||+||++|||++|+.||....... ........... .
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 159 PLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred Ccc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHhh
Confidence 321 12334578889999987654 46899999999999999999999997542211 01111000000 0
Q ss_pred hhhhcccCcc--CChhhhHHHhHHH-HHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 933 SIMKIVDGSL--LSREDIQFVAKEQ-CMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 933 ~~~~i~~~~~--~~~~~~~~~~~~~-~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.+........ ..........+.. ....+.+++.+||+.+|++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000000000 0000000011111 35678899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=318.04 Aligned_cols=290 Identities=21% Similarity=0.215 Sum_probs=207.5
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh-hHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK-ALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 780 (1002)
..+|.+.+.||+|+||+||+|+. .+++.||||.+... .......+.+|+.+++.++||||+++++++...... ...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45789999999999999999985 46899999998753 223345677899999999999999999987654311 123
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++|+||+. ++|.+++...+ .+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||++...
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 579999996 68988887654 5899999999999999999999 899999999999999999999999999999866
Q ss_pred cCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH---Hhhhh--
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW---LLISI-- 934 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~---~~~~~-- 934 (1002)
..... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||...... .......... .....
T Consensus 159 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 159 SEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred CCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHhCCCChHHhhh
Confidence 44321 1233457888999998654 46899999999999999999999999653211 0000000000 00000
Q ss_pred ------hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhcccC--CCCCCCCCCC
Q 037042 935 ------MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKINDLD--FNGYPSYAFC 1002 (1002)
Q Consensus 935 ------~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~~~--~~~~~~y~~~ 1002 (1002)
.+..+..............+.++..+.+++.+||+++|++|||++|+++| +..+++.. +...++++||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~~~~~~~~~ 313 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPVCQTPFSFD 313 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCccCCCccchh
Confidence 00000000000000001112356778999999999999999999999999 66655332 2223355554
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=303.79 Aligned_cols=254 Identities=21% Similarity=0.288 Sum_probs=201.9
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||.|+||.||+|.. .+++.||+|++.... ....+.+..|++++++++||||+++++++...... ..++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~--~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQ--TLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCC--EEEE
Confidence 477889999999999999974 468899999987432 33456788899999999999999999987643311 3469
Q ss_pred hhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCC--CCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 784 ALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGY--STPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
+|||+++++|.+++... ...+++..++.++.|+++|++|||... +.+|+||||||+||+++.++.+||+|||++.
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccc
Confidence 99999999999998764 346899999999999999999999554 6789999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
........ .....++..|+|||+..+..++.++||||||+++|+|++|+.||..... ..+... +.
T Consensus 159 ~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~--------~~ 223 (265)
T cd08217 159 ILGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-----LQLASK--------IK 223 (265)
T ss_pred cccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-----HHHHHH--------Hh
Confidence 76543321 1234688899999999888899999999999999999999999976321 111111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
++... ..+...+..+.+++.+|++.+|++||++.+|++|
T Consensus 224 ~~~~~-------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 224 EGKFR-------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred cCCCC-------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11100 0112345678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=311.28 Aligned_cols=249 Identities=24% Similarity=0.330 Sum_probs=198.3
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
|...+.||+|+||.||+|+.. ++..||+|++.... ......+..|++++++++|||++++++++...+ ..++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~l 102 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH----TAWL 102 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC----eEEE
Confidence 677789999999999999854 68999999986432 234567888999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++ ++.+.+......+++.++..++.|++.|+.||| +.+|+||||+|+||+++.++.+||+|||++......
T Consensus 103 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 103 VMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred EEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 9999975 888887665667899999999999999999999 899999999999999999999999999998754432
Q ss_pred CceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
....|+..|+|||++. .+.++.++|||||||++|||++|+.||....... ... .+...
T Consensus 179 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~------------~~~~~ 239 (317)
T cd06635 179 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALY------------HIAQN 239 (317)
T ss_pred ------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHH------------HHHhc
Confidence 2345788899999863 4568999999999999999999999986531110 000 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
..... .....+..+.+++.+||+.+|++||++.+++++...+.
T Consensus 240 ~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 240 ESPTL------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred cCCCC------CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 10000 01224466899999999999999999999999877554
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=307.92 Aligned_cols=251 Identities=24% Similarity=0.290 Sum_probs=199.9
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.|...+.||+|++|.||+|.. .+++.||+|++........+.+.+|+.++++++||||+++++++..++ ..++|+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~----~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD----ELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC----eEEEEE
Confidence 355567999999999999985 468999999987554445567889999999999999999999988766 568999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+........
T Consensus 96 e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 96 EFLEGGALTDIVTHT--RMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred eccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence 999999999998773 4788999999999999999999 89999999999999999999999999998875543221
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
......|+..|+|||...+..++.++|||||||++|||++|+.||..... ...... +.....+...
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~-----~~~~~~~~~~-- 236 (285)
T cd06648 171 --RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKR-----IRDNLPPKLK-- 236 (285)
T ss_pred --ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHH-----HHhcCCCCCc--
Confidence 12234588899999998888899999999999999999999999865211 111111 0100000000
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+..++..+.+++.+||+.+|++||++.++++|-.
T Consensus 237 ------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (285)
T cd06648 237 ------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPF 271 (285)
T ss_pred ------ccccCCHHHHHHHHHHcccChhhCcCHHHHccCcc
Confidence 01123467899999999999999999999998633
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=335.00 Aligned_cols=259 Identities=23% Similarity=0.352 Sum_probs=194.1
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh---
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA--- 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--- 778 (1002)
...+|++.+.||+||||.||+++.+ ||+.||||++.-. .......+.+|+..+++++|||||++|..|.+.....
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 4567888999999999999999966 8999999998754 3445677889999999999999999887654322110
Q ss_pred --------------------------------------------------------------------------------
Q 037042 779 -------------------------------------------------------------------------------- 778 (1002)
Q Consensus 779 -------------------------------------------------------------------------------- 778 (1002)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred --------------------------------HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC
Q 037042 779 --------------------------------LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826 (1002)
Q Consensus 779 --------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~ 826 (1002)
...||-||||+..++.+++++....-.....++++.+|++||+|+|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH-- 714 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH-- 714 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH--
Confidence 1124678888887777777665542256778899999999999999
Q ss_pred CCCCcEEccCCCCCeeeCCCCcEEEeccccccccc----C------------CCceeeeccCCCCcccccccccCCC---
Q 037042 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT----R------------EDQFVTQTQTPATIGYMALEYGSEG--- 887 (1002)
Q Consensus 827 ~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~----~------------~~~~~~~~~~~gt~~y~aPE~~~~~--- 887 (1002)
++|||||||||.||+++++..|||+|||+|+... . .......+..+||.-|+|||++.+.
T Consensus 715 -~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 715 -DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred -hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 9999999999999999999999999999998722 0 1112234677899999999987654
Q ss_pred CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHc
Q 037042 888 RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMEC 967 (1002)
Q Consensus 888 ~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 967 (1002)
.|+.|+|+||+|||++||+. ||....+. ... +..+.++.+..+.+ ........-.++|..|
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~TsMER----a~i--------L~~LR~g~iP~~~~----f~~~~~~~e~slI~~L 854 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTSMER----ASI--------LTNLRKGSIPEPAD----FFDPEHPEEASLIRWL 854 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCchHHH----HHH--------HHhcccCCCCCCcc----cccccchHHHHHHHHH
Confidence 49999999999999999987 45443221 111 22333333333211 1112233456799999
Q ss_pred cccCCCCCCCHHHHHHH
Q 037042 968 TVESPEKRINAKEIVTR 984 (1002)
Q Consensus 968 l~~~P~~Rpt~~evl~~ 984 (1002)
++.||.+||||.|++..
T Consensus 855 l~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 855 LSHDPSKRPTATELLNS 871 (1351)
T ss_pred hcCCCccCCCHHHHhhc
Confidence 99999999999999864
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=308.83 Aligned_cols=264 Identities=23% Similarity=0.264 Sum_probs=196.6
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+|+.. +|+.||||++.... ......+..|++++++++||||+++++++...+ ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~~ 76 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN----KLYL 76 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCC----cEEE
Confidence 4788899999999999999864 68999999886443 223457888999999999999999999987666 5689
Q ss_pred hhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+. ++|.+++.... ..+++..+..++.|+++|++||| ..+++||||+|+||+++.++.+||+|||++.....
T Consensus 77 v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~ 152 (284)
T cd07860 77 VFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 152 (284)
T ss_pred Eeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhccc
Confidence 999996 58988886543 36889999999999999999999 89999999999999999999999999999876543
Q ss_pred CCceeeeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh---------
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--------- 932 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--------- 932 (1002)
... ......++..|+|||+..+.. ++.++|||||||++|||+||+.||....... ............
T Consensus 153 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 153 PVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred Ccc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhh
Confidence 321 123345678899999876644 6889999999999999999999996532211 111111100000
Q ss_pred ---hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 933 ---SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 933 ---~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.....+.. .. ...... ........+.+++.+|++.||++|||++|+++|
T Consensus 230 ~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 230 SLPDYKPSFPK-WA-RQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHHhhccc-cc-ccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000000 00 000000 011234567899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=307.62 Aligned_cols=255 Identities=27% Similarity=0.343 Sum_probs=205.9
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..+.|+..+.||+|+||.||+|... +++.||+|++..... ..+.+..|++++++++|+||+++++++...+ ..+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGD----ELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC----EEE
Confidence 3566888899999999999999866 688999999976544 4677889999999999999999999998776 668
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|+||+++++|.+++......+++..+..++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||++.....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 999999999999999886546899999999999999999999 89999999999999999999999999999876543
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......++..|+|||+..+..++.++|||||||++|||++|+.||........ .. .+.....
T Consensus 169 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-----~~--------~~~~~~~ 233 (286)
T cd06614 169 EKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-----LF--------LITTKGI 233 (286)
T ss_pred chh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-----HH--------HHHhcCC
Confidence 321 11233477889999998888899999999999999999999999865321110 00 0000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... ..+..++..+.+++.+|++.+|.+||++.+++++-.
T Consensus 234 ~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 234 PPL-----KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred CCC-----cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 000 011224567889999999999999999999998765
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=301.11 Aligned_cols=251 Identities=25% Similarity=0.322 Sum_probs=204.4
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+|+..+.||+|+||.||+|+.. +++.||||++..... .....+..|++++++++|+||+++++++.... ..++|
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv 77 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG----EISIV 77 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC----eEEEE
Confidence 5888899999999999999865 599999999876543 45678999999999999999999999988765 66899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+||+++++|.+++... ..+++..+..++.|+++|++||| + .+++||||+|+||+++.++.++|+|||.+......
T Consensus 78 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 78 LEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred EEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999999999765 35899999999999999999999 8 99999999999999999999999999999876543
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.... ....++..|+|||......++.++||||||+++|||++|+.||...... ...+... .+......
T Consensus 154 ~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~--------~~~~~~~~ 221 (264)
T cd06623 154 LDQC--NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQ--------AICDGPPP 221 (264)
T ss_pred CCcc--cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHH--------HHhcCCCC
Confidence 3211 2345778899999998888999999999999999999999999765321 1111111 11111000
Q ss_pred ChhhhHHHhHHH-HHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 944 SREDIQFVAKEQ-CMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 944 ~~~~~~~~~~~~-~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. .+.. .+..+.+++.+|++++|++||++.|++++
T Consensus 222 ~-------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 S-------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred C-------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 0111 45678999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=304.61 Aligned_cols=247 Identities=23% Similarity=0.311 Sum_probs=199.3
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
-|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++ ..++|
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 80 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT----KLWII 80 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC----eEEEE
Confidence 4777889999999999999754 68899999986442 334567889999999999999999999998776 66899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++... .+++..+..++.|++.|++||| ..+++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 81 MEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 9999999999998654 4789999999999999999999 8999999999999999999999999999987654322
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......++..|+|||...+..++.++|||||||++|||++|..||...... .+... +......
T Consensus 156 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~--------~~~~~~~- 219 (277)
T cd06641 156 I--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFL--------IPKNNPP- 219 (277)
T ss_pred h--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHH--------HhcCCCC-
Confidence 1 112345788899999988888899999999999999999999998653211 11110 0000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..+..++..+.+++.+||+.+|++||++.++++|
T Consensus 220 ------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 220 ------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0012234668899999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=293.74 Aligned_cols=267 Identities=23% Similarity=0.309 Sum_probs=220.4
Q ss_pred HHHHHhhcCCCCCceeeccCcceEEEEEeCC------CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEE
Q 037042 699 LELCQATDGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCC 771 (1002)
Q Consensus 699 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 771 (1002)
.++.....+++....+-+|.||+||+|.|.+ .+.|-||.++... +.+...+..|.-.+..+.|||+.++.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 4455556678888889999999999996542 4457788876553 34556788899999999999999999988
Q ss_pred ecCchhhHHHHHhhccCCCCChhHhhhcc-----C--CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC
Q 037042 772 SIGDFKALFKALALEYMPHGSLEKYLYSS-----N--YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844 (1002)
Q Consensus 772 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~ 844 (1002)
.+... ..+++|.++.-|+|..|+... . ..++..+...+|.|++.|++||| +++|||.||.++|.+||
T Consensus 357 ie~~~---~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 357 IEDYA---TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVID 430 (563)
T ss_pred eeccC---cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceeh
Confidence 76442 446788999999999999832 2 25777788899999999999999 99999999999999999
Q ss_pred CCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHH
Q 037042 845 DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLK 923 (1002)
Q Consensus 845 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~ 923 (1002)
+.-+|||+|=.+++.+.+.+++.-+.....+..||+||.+....|+.++|||||||++|||+| |+.|+.+.++.++ .
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm--~ 508 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM--E 508 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH--H
Confidence 999999999999999999888777777778899999999999999999999999999999999 9999987654332 1
Q ss_pred HHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 924 HWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 924 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. -+.|+. +...|-+|+++++.+|..||...|++||+++++..-|.++...
T Consensus 509 ~-----------ylkdGy-------RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 509 H-----------YLKDGY-------RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred H-----------HHhccc-------eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 1 122222 2223457999999999999999999999999999999988643
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=305.19 Aligned_cols=267 Identities=22% Similarity=0.270 Sum_probs=199.8
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+|+..+.||+|++|.||+|+.. +|+.||||+++.... ...+.+..|++++++++||||+++++++...+ ..++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 76 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN----KLMLV 76 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC----cEEEE
Confidence 4788899999999999999865 689999999875432 23466778999999999999999999998776 56899
Q ss_pred hccCCCCChhHhhhccC--CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 785 LEYMPHGSLEKYLYSSN--YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
|||+++ +|.+++.... ..+++..+..++.|+++|++||| +.+++||||||+||++++++.++++|||++.....
T Consensus 77 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~ 152 (284)
T cd07836 77 FEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI 152 (284)
T ss_pred EecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence 999985 8988886544 35899999999999999999999 88999999999999999999999999999976543
Q ss_pred CCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh------hhh
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI------SIM 935 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~------~~~ 935 (1002)
... ......++..|+|||++.+. .++.++|||||||++|||++|+.||......+. ........... .+.
T Consensus 153 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 153 PVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred Ccc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhHHHHh
Confidence 221 11234568889999987654 578999999999999999999999976432211 11111100000 000
Q ss_pred h--cccCccCC-hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 936 K--IVDGSLLS-REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 936 ~--i~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. ........ .........+.++..+.+++.+|++.+|++||++.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 00000000 0000111122346778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=314.66 Aligned_cols=278 Identities=21% Similarity=0.230 Sum_probs=201.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh-hHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK-ALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 781 (1002)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|+.++++++||||+++++++...... ....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46799999999999999999975 468999999986432 33456678899999999999999999987654421 1235
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++|+||+++ ++.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 789999965 888877543 4889999999999999999999 8999999999999999999999999999997654
Q ss_pred CCCcee-eeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH---Hhhhhhh
Q 037042 862 REDQFV-TQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW---LLISIMK 936 (1002)
Q Consensus 862 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~---~~~~~~~ 936 (1002)
...... ......||..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....+.... ..+....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~ 236 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-QLNLILGVLGTPSQEDLNC 236 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHH
Confidence 332211 1123467889999998654 568999999999999999999999996532110 000000000 0000111
Q ss_pred cccCcc-------CChhhhH-HHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhc
Q 037042 937 IVDGSL-------LSREDIQ-FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIN 989 (1002)
Q Consensus 937 i~~~~~-------~~~~~~~-~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~ 989 (1002)
+.+... ....... ....+.....+.+++.+||+.+|++|||+.|+++| ++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 111000 0000000 00011235678999999999999999999999998 55554
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=300.18 Aligned_cols=250 Identities=28% Similarity=0.367 Sum_probs=203.8
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
+|+..+.||+|++|.||+|... +++.|++|++........+.+.+|++++++++|++|+++++++.... ..++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD----ELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----eEEEEE
Confidence 3777899999999999999865 68999999998765556688999999999999999999999987765 567999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++++|.+++......+++..+..++.|+++|++||| ..+++||||+|+||++++++.++|+|||.+........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 999999999999876556899999999999999999999 89999999999999999999999999999987655432
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
.....++..|+|||...+..++.++||||||+++++|++|+.||...... ............. ..
T Consensus 154 ---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~-----~~-- 218 (253)
T cd05122 154 ---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM-----KALFKIATNGPPG-----LR-- 218 (253)
T ss_pred ---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH-----HHHHHHHhcCCCC-----cC--
Confidence 13345788899999988888999999999999999999999998753211 1000000000000 00
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.+...+..+.+++.+||+.+|++|||+.|+++|
T Consensus 219 ------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 219 ------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ------cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011124568999999999999999999999876
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=310.62 Aligned_cols=274 Identities=18% Similarity=0.235 Sum_probs=197.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh----
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK---- 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 777 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457999999999999999999864 68999999886432 22334567899999999999999999988764311
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
....++||||+.+ ++.+++......+++.++..++.||++|++||| +.+++||||||+||+++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 1234799999965 888888766556899999999999999999999 889999999999999999999999999999
Q ss_pred ccccCCCce--eeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh---
Q 037042 858 KLLTREDQF--VTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL--- 931 (1002)
Q Consensus 858 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~--- 931 (1002)
......... .......++..|+|||...+. .++.++|||||||++|||++|+.||....... ....+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~--~~~~~~~~~~~~~ 244 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH--QLTLISQLCGSIT 244 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCC
Confidence 866443221 112234577889999987654 37889999999999999999999986532211 1111111000
Q ss_pred hhhh------hccc----CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 932 ISIM------KIVD----GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 932 ~~~~------~i~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.... ...+ +............+......+.+++.+||+.+|++|||++|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0000 0000 000000000000001123457799999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=313.12 Aligned_cols=276 Identities=24% Similarity=0.282 Sum_probs=201.0
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1002)
..++|+..+.||+|+||.||+|... +++.||+|++.+. .......+.+|+.+++++ +||||+++++++...+. .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~--~ 82 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND--K 82 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC--c
Confidence 3467888999999999999999865 6889999988542 223345677899999999 99999999998865432 1
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||++ ++|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 3579999997 4999988765 5788999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCce---eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH-------
Q 037042 860 LTREDQF---VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND------- 928 (1002)
Q Consensus 860 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~------- 928 (1002)
....... .......|+..|+|||++.+ ..++.++|||||||++|||++|+.||........ .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~ 235 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAE 235 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHH
Confidence 6443221 12223457889999997654 4578999999999999999999999965322110 0000000
Q ss_pred ----HHhhhhhhcccCccCC-hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhc
Q 037042 929 ----WLLISIMKIVDGSLLS-REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIN 989 (1002)
Q Consensus 929 ----~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~ 989 (1002)
........+.+..... ........ ..++..+.+++.+||+.+|++|||+.+++++ +..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELL-PKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhc-cCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 0000000011100000 00001111 1246778999999999999999999999988 44443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=289.19 Aligned_cols=249 Identities=23% Similarity=0.261 Sum_probs=201.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccc---hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG---RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|...++||+|.||.|..++- .+|+.+|+|+++++.- ........|-++++..+||.+..+--.|...+ .
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d----r 242 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD----R 242 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc----e
Confidence 46788999999999999999984 4799999999987643 33455667999999999999998877777666 6
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.|.||||+.||.|.-.+.+.+. +++...+.+-..|+.||.||| +++||.||+|.+|.|+|+||.+||+|||+++.-
T Consensus 243 lCFVMeyanGGeLf~HLsrer~-FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSRERV-FSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred EEEEEEEccCceEeeehhhhhc-ccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhc
Confidence 7899999999999988877654 788888889999999999999 899999999999999999999999999999864
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .++...+||+.|+|||++....|+.++|.|.+|||+|||++|+.||.....+.. -+ -|.-.
T Consensus 319 I~~g--~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL--Fe-----------LIl~e 383 (516)
T KOG0690|consen 319 IKYG--DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL--FE-----------LILME 383 (516)
T ss_pred cccc--ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH--HH-----------HHHhh
Confidence 3222 245678999999999999999999999999999999999999999987433211 00 00000
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
.+ ..|....++...++...+..||.+|. .+.||.+|
T Consensus 384 d~--------kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 384 DL--------KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred hc--------cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 01 11223445677888899999999997 46677665
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=314.59 Aligned_cols=272 Identities=20% Similarity=0.197 Sum_probs=200.0
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KA 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~ 778 (1002)
...+|+..+.||+|+||.||+|+.. +|+.||+|++.+. .......+.+|+.++++++||||+++++++..... ..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999854 7899999998643 23344567789999999999999999998864431 11
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++||||+++ +|.+.+... ++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 166 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence 235799999965 888887543 788889999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc----------cHHHHHHH
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM----------TLKHWVND 928 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~----------~~~~~~~~ 928 (1002)
....... .....++..|+|||+..+..++.++|||||||++|+|++|+.||........ ...++...
T Consensus 167 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 167 TAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred eCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 7644321 2234578889999999888999999999999999999999999965321100 00011111
Q ss_pred HHhhhhhhcccCccCC-hhhhHH------------HhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 929 WLLISIMKIVDGSLLS-REDIQF------------VAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~-~~~~~~------------~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... ......+..... ...... ......+..+.+++.+|++.||++|||+.|+++|=+
T Consensus 244 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~ 313 (353)
T cd07850 244 LQP-TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313 (353)
T ss_pred hhh-hhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChh
Confidence 000 000000000000 000000 001123567889999999999999999999998853
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=310.43 Aligned_cols=272 Identities=23% Similarity=0.230 Sum_probs=200.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|++.+.||+|+||+||+|... +|+.||+|+++... ......+.+|++++++++|+||+++++++...... ..
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLD--SI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCC--eE
Confidence 467999999999999999999864 68999999987442 22234566799999999999999999998654321 35
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++ +|.+++......+++.++..++.|+++|++||| +.+++||||||+||+++.++.+||+|||++....
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 799999975 898888776566899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc--
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV-- 938 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~-- 938 (1002)
.... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||....... .+..... ........+.
T Consensus 160 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~~-~~~~~~~~~~~~ 235 (309)
T cd07845 160 LPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLIIQ-LLGTPNESIWPG 235 (309)
T ss_pred CccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-hcCCCChhhchh
Confidence 4322 1223345778999998765 457999999999999999999999997532211 1111111 0000000000
Q ss_pred -c------C-ccC--ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 939 -D------G-SLL--SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 939 -~------~-~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
+ . ... ....... ........+.+++.+|+++||++|||+.|+++|-+-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f 293 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKH-KFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293 (309)
T ss_pred hhcccccccccccCCCCCchHH-hccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 0 0 000 0000000 001135667899999999999999999999998663
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=304.47 Aligned_cols=248 Identities=23% Similarity=0.314 Sum_probs=200.6
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+|+..+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+.+|++++++++||||+++++++..+. ..+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 76 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE----NMY 76 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC----eEE
Confidence 4788899999999999999865 68999999997542 234678889999999999999999999887666 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|+||+++++|.+++... ..+++..+..++.|+++|++||| ..+++|+||||+||++++++.++|+|||.+.....
T Consensus 77 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 77 LVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred EEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence 999999999999999766 35889999999999999999999 88999999999999999999999999999876654
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. ......|+..|+|||+.....++.++|+||+|+++|+|++|+.||...... ...+.. +....
T Consensus 153 ~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~--------~~~~~-- 216 (258)
T cd05578 153 DT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIR--------AKQET-- 216 (258)
T ss_pred Cc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHH--------HHhcc--
Confidence 32 123456788899999988888999999999999999999999999764322 111111 11110
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH--HHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA--KEIVT 983 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~--~evl~ 983 (1002)
. ....+...+..+.+++.+||+.+|++||++ +|+++
T Consensus 217 ~-----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 217 A-----DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred c-----cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 0 000112345678899999999999999999 66654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=303.55 Aligned_cols=265 Identities=20% Similarity=0.224 Sum_probs=193.9
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
|+..+.||+|+||.||+|+.. +++.||+|++++.. .........|+.+++++. |+||+++++++.+.... ..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~--~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTG--RLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCC--cEEEE
Confidence 566789999999999999854 68999999987542 222234457888999885 99999999998876211 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
+||++ |++.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++. +.+||+|||+++......
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 99997 5888888765556899999999999999999999 899999999999999999 999999999998764432
Q ss_pred ceeeeccCCCCcccccccccC-CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh---hhhhcccC
Q 037042 865 QFVTQTQTPATIGYMALEYGS-EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI---SIMKIVDG 940 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~ 940 (1002)
.. ....++..|+|||+.. ++.++.++||||+||++|||++|..||......+ ...+....... ...+....
T Consensus 154 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 154 PY---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred Cc---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcCCCCHHHHHhhcc
Confidence 21 2245788899999754 4557899999999999999999999996532211 11111110000 00000000
Q ss_pred ------ccCChhhhH-HHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 941 ------SLLSREDIQ-FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 941 ------~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
......... .......+..+.+++.+||+++|++||+++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000000000 00112356789999999999999999999999986
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=287.65 Aligned_cols=275 Identities=21% Similarity=0.224 Sum_probs=198.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC---C--CcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ---D--GMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~---~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
...|+....||+|.||.||+|..+ + .+.+|+|.++.+. .......-+|+..++.++||||+.+..++...+
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d-- 100 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD-- 100 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC--
Confidence 346889999999999999999532 2 3379999997552 233456678999999999999999998887643
Q ss_pred hHHHHHhhccCCCCChhHhhhccC----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC----CcE
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN----MVA 849 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~----~~~ 849 (1002)
...++++||++. +|...++-++ ..++...+..|++||+.|+.||| ++=|+|||+||.|||+..+ |.|
T Consensus 101 -~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~V 175 (438)
T KOG0666|consen 101 -KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRV 175 (438)
T ss_pred -ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCee
Confidence 156799999988 8988886543 26888889999999999999999 8889999999999999876 999
Q ss_pred EEecccccccccCCCcee-eeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCccccccc--c-----
Q 037042 850 HLSDFGITKLLTREDQFV-TQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEG--M----- 920 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P~~~~~~~~--~----- 920 (1002)
||+|||+++.+..+-... +....+.|.+|.|||.+.+.+ |+++.||||+|||+.||+|-.+-|......- .
T Consensus 176 KIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~ 255 (438)
T KOG0666|consen 176 KIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQH 255 (438)
T ss_pred EeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchH
Confidence 999999999887654332 334567899999999887764 8999999999999999999888776532210 0
Q ss_pred -cHHHHHHHHHhh------hhhhcccC---------ccCChhhhHHHhH--HHHHHHHHHHHhHccccCCCCCCCHHHHH
Q 037042 921 -TLKHWVNDWLLI------SIMKIVDG---------SLLSREDIQFVAK--EQCMSFVFNMAMECTVESPEKRINAKEIV 982 (1002)
Q Consensus 921 -~~~~~~~~~~~~------~~~~i~~~---------~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~~P~~Rpt~~evl 982 (1002)
.+..+++-.... .+.++-+- ..........+.. ..-.+..++++.+++++||.+|.|+++++
T Consensus 256 dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAl 335 (438)
T KOG0666|consen 256 DQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQAL 335 (438)
T ss_pred HHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHh
Confidence 011111100000 00000000 0000000111100 00123378999999999999999999999
Q ss_pred HHHH
Q 037042 983 TRLL 986 (1002)
Q Consensus 983 ~~L~ 986 (1002)
+|.-
T Consensus 336 eh~y 339 (438)
T KOG0666|consen 336 EHPY 339 (438)
T ss_pred cccc
Confidence 9865
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=300.84 Aligned_cols=249 Identities=21% Similarity=0.229 Sum_probs=193.3
Q ss_pred HHHHhhcCCCCCcee--eccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCc
Q 037042 700 ELCQATDGFSENNLI--GRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGD 775 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~l--G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 775 (1002)
+.....+.|++.+.+ |+|+||.||+++. .+++.+|+|++....... .|+.....+ +||||+++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence 344445667776766 9999999999985 468899999987542111 122222222 7999999999998776
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEecc
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDF 854 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~Df 854 (1002)
..++||||+++|+|.+++.... .+++..+..++.||++|++||| +.+++||||||+||+++.++ .++|+||
T Consensus 83 ----~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 83 ----GHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred ----eeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 6789999999999999997765 5899999999999999999999 89999999999999999988 9999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
|+++..... ....++..|+|||++.+..++.++||||+||++|||++|+.||.....+......+....
T Consensus 155 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----- 223 (267)
T PHA03390 155 GLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ----- 223 (267)
T ss_pred ccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-----
Confidence 998765432 223578899999999888899999999999999999999999985443332222222211
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-HHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-AKEIVTR 984 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-~~evl~~ 984 (1002)
.... ......+..+.+++.+||+.+|++||+ ++|+++|
T Consensus 224 ----~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 224 ----QKKL--------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred ----cccC--------CcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 0000 011134567899999999999999996 6999875
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=305.09 Aligned_cols=269 Identities=23% Similarity=0.290 Sum_probs=200.2
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++|||++++++++...+ ....++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG--KGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC--CCcEEEE
Confidence 567789999999999999865 58999999998653 334567888999999999999999999987661 1156899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
+||+++ +|.+++......+++..++.++.||++|++||| +.+++|+||||+||++++++.+||+|||++.......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 999975 899888776556899999999999999999999 8899999999999999999999999999998765443
Q ss_pred ceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh---h---hhhc
Q 037042 865 QFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI---S---IMKI 937 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~---~~~i 937 (1002)
. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ............ . ..++
T Consensus 155 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 155 S-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred c-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccc
Confidence 2 12234456788999997654 457899999999999999999999987543211 111111100000 0 0000
Q ss_pred -----ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 938 -----VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 938 -----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..................++..+.+++.+||..+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000000011111111236778999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=304.69 Aligned_cols=243 Identities=21% Similarity=0.272 Sum_probs=186.1
Q ss_pred eeeccCcceEEEEEeC-CCcEEEEEEeecccc---hhHHHHHHHHHHHH---hccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 713 LIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---RAFKSFDVECEVMK---SIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 713 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~---~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.||+|+||.||+|... +++.||+|++.+... .....+..|..+++ ..+||+|+.+++++..++ ..++||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~ 76 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD----KLCFIL 76 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC----eEEEEE
Confidence 4899999999999864 689999999865321 11223344444433 347999999999987766 567999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++........
T Consensus 77 e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 152 (279)
T cd05633 77 DLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 152 (279)
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc
Confidence 9999999999987654 4899999999999999999999 89999999999999999999999999999876543221
Q ss_pred eeeeccCCCCcccccccccC-CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 866 FVTQTQTPATIGYMALEYGS-EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
....|+..|+|||... +..++.++||||+||++|||++|+.||........ .. .... ......
T Consensus 153 ----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~-~~~~-----~~~~~~---- 216 (279)
T cd05633 153 ----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HE-IDRM-----TLTVNV---- 216 (279)
T ss_pred ----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HH-HHHH-----hhcCCc----
Confidence 2346899999999876 45689999999999999999999999975422211 11 1100 000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRL 985 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L 985 (1002)
..+...+..+.+++.+|++.+|++|| +++|+++|-
T Consensus 217 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 217 ------ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred ------CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 01123456788999999999999999 699999884
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=299.34 Aligned_cols=249 Identities=21% Similarity=0.300 Sum_probs=198.7
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|...+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++...+ ..++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~----~~~l 76 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG----RLFI 76 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC----eEEE
Confidence 4778899999999999999865 68899999986532 233467789999999999999999999987766 5689
Q ss_pred hhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~ 861 (1002)
|+||+++++|.+++..... .+++..+..++.|+++|++||| +.+|+|+||||+||++++++ .+||+|||.+....
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (257)
T cd08225 77 VMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN 153 (257)
T ss_pred EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence 9999999999999876443 5789999999999999999999 89999999999999998875 56999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.... ......|++.|+|||+.....++.++|||||||++|||++|+.||.... ..+++.... ...
T Consensus 154 ~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~--------~~~ 218 (257)
T cd08225 154 DSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKIC--------QGY 218 (257)
T ss_pred CCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHh--------ccc
Confidence 4322 1123457889999999888889999999999999999999999986532 122221111 111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
... .....+..+.+++.+||..+|++|||+.|++++
T Consensus 219 ~~~-------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 219 FAP-------ISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCC-------CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 000 011234568899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=305.94 Aligned_cols=266 Identities=23% Similarity=0.239 Sum_probs=196.8
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
|+..+.||.|++|.||+|... +|+.||+|++.... ......+..|++++++++||||+++++++..++ ..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~----~~~iv 76 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSEN----KLYLV 76 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCC----eEEEE
Confidence 567789999999999999854 79999999987543 223456788999999999999999999988765 67899
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||++ ++|.+++.... ..+++..+..++.|+++||+||| +++++||||+|+||+++.++.++|+|||++......
T Consensus 77 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~ 152 (283)
T cd07835 77 FEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP 152 (283)
T ss_pred EeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC
Confidence 99995 68999987654 35899999999999999999999 889999999999999999999999999999765432
Q ss_pred CceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh---------h
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI---------S 933 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~---------~ 933 (1002)
.. ......++..|+|||++.+. .++.++|||||||++|||++|+.||....... ............ .
T Consensus 153 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 153 VR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred cc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhh
Confidence 21 11233567889999987654 47899999999999999999999997542211 111111100000 0
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..+....................+..+.+++.+|++++|++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000000000000000112234678899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=331.08 Aligned_cols=254 Identities=28% Similarity=0.472 Sum_probs=206.4
Q ss_pred CCCCceeeccCcceEEEEEeC----C----CcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ----D----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~----~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
..+.+.+|+|+||.|++|... . ...||||.++... ....+.+..|+++|+.+ +|+||+.++|+|...+
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~-- 375 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG-- 375 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC--
Confidence 345568999999999999732 1 4569999987543 34568899999999999 6999999999998754
Q ss_pred hHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCee
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVL 842 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NIL 842 (1002)
..++|+||+..|+|.++++..+ ..+.....+.++.|||.|++||+ +.++||||+.++|||
T Consensus 376 --~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 376 --PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVL 450 (609)
T ss_pred --ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEE
Confidence 6689999999999999999877 34888999999999999999999 999999999999999
Q ss_pred eCCCCcEEEecccccccccCCCceeeeccCC--CCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCccccccc
Q 037042 843 LGDNMVAHLSDFGITKLLTREDQFVTQTQTP--ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEG 919 (1002)
Q Consensus 843 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~ 919 (1002)
++++..+||+|||+|+.....+.... .... -+..|||||.+....|+.++|||||||++||++| |..||.......
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~-~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRT-KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEe-cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 99999999999999997766554432 2222 3556999999999999999999999999999999 889987622111
Q ss_pred ccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 920 MTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
.+.++ +.++. +...|..|..+++++|+.||+.+|++||++.|+.+.++..
T Consensus 530 -~l~~~-----------l~~G~-------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 530 -ELLEF-----------LKEGN-------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred -HHHHH-----------HhcCC-------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 11111 11111 2223456788999999999999999999999999999883
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=310.76 Aligned_cols=277 Identities=20% Similarity=0.235 Sum_probs=199.8
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
..+|...+.||+|+||.||+|+. .+|+.||||++.+.. ......+.+|++++++++||||+++++++...... ..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 36899999999999999999985 468999999986532 22345678899999999999999999988654311 11
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|+||+.. ++.++.. ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred eEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 23689999864 7776652 24788999999999999999999 89999999999999999999999999999876
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh--hhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL--ISIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~ 936 (1002)
..... ....++..|+|||+..+ ..++.++|||||||++|||++|+.||....... .+...+..... ....+
T Consensus 167 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 167 ADAEM-----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCCCC-----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 53321 23456788999998766 468999999999999999999999997532111 01100000000 00000
Q ss_pred cccCc----------cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhcccCCCC
Q 037042 937 IVDGS----------LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKINDLDFNG 995 (1002)
Q Consensus 937 i~~~~----------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~~~~~~ 995 (1002)
..... ......... ........+.+++.+||+++|++||+++|+++| ++.+++.....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~ 310 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFST-LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEET 310 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHH-HhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccC
Confidence 00000 000000000 001234568899999999999999999999987 88777654333
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=328.74 Aligned_cols=258 Identities=23% Similarity=0.272 Sum_probs=210.4
Q ss_pred HHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCc
Q 037042 700 ELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1002)
++....++|.+.++||+|+||.|..++.+ +++.||+|++.+. ......-|..|.++|..-+.+-||.+.-.|.+..
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 44455688999999999999999999854 6889999999863 2234567888999999999999999998888777
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
+.|+|||||+||+|-.++.... .+++..++.++..|+-||.-+| +.|+|||||||+|||+|..|.+||+|||
T Consensus 149 ----~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 149 ----YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred ----ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccch
Confidence 8899999999999999998887 6999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccC----C-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGS----E-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
.+-.+..++.. .....+|||.|++||++. + +.|++.+|.||+||++|||+.|..||+... +.
T Consensus 221 sClkm~~dG~V-~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-----lv------- 287 (1317)
T KOG0612|consen 221 SCLKMDADGTV-RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-----LV------- 287 (1317)
T ss_pred hHHhcCCCCcE-EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-----HH-------
Confidence 99888765543 345678999999999754 3 569999999999999999999999997631 11
Q ss_pred hhhhhhcccC--ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC---HHHHHHHHH
Q 037042 931 LISIMKIVDG--SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN---AKEIVTRLL 986 (1002)
Q Consensus 931 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt---~~evl~~L~ 986 (1002)
+...+|.+. .+..+ .....+....++|.+.+. +|+.|.. ++|+-.|-.
T Consensus 288 -eTY~KIm~hk~~l~FP------~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpF 340 (1317)
T KOG0612|consen 288 -ETYGKIMNHKESLSFP------DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPF 340 (1317)
T ss_pred -HHHHHHhchhhhcCCC------cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCcc
Confidence 112333333 11111 112356677788877765 7899988 999988854
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=298.36 Aligned_cols=254 Identities=26% Similarity=0.340 Sum_probs=204.9
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||||+++++++.... ....++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE--KNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC--CCeEEE
Confidence 4777899999999999999865 689999999876542 45678899999999999999999999988762 115579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+||+++++|.+++.... .+++..+..++.|+++|++||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 999999999999998765 6899999999999999999999 899999999999999999999999999999877654
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
..........++..|+|||......++.++||||||+++++|++|+.||...... ... ...+......
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~---------~~~~~~~~~~ 222 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP---MAA---------LYKIGSSGEP 222 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch---HHH---------HHhccccCCC
Confidence 3211123456788999999988888999999999999999999999999764311 000 1111110000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. ..+...+..+.+++.+|+..+|++||++.|+++|
T Consensus 223 ~------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 223 P------EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred c------CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 0 0122335779999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=307.72 Aligned_cols=254 Identities=26% Similarity=0.320 Sum_probs=192.3
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|...+.||+|+||+||+++.. +++.||+|.+.... ......+.+|+.++.++. ||||+++++++..+. ..++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~----~~~~ 80 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG----DCWI 80 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC----cEEE
Confidence 4566688999999999999854 68999999987543 234567888999999996 999999999887655 5578
Q ss_pred hhccCCCCChhHhh---hcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 784 ALEYMPHGSLEKYL---YSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 784 v~e~~~~g~L~~~l---~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
||||+.. ++.++. ... ...+++..+..++.++++|++|||+ ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 157 (288)
T cd06616 81 CMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQ 157 (288)
T ss_pred EEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHH
Confidence 9999864 555433 222 2458899999999999999999993 35899999999999999999999999999976
Q ss_pred ccCCCceeeeccCCCCcccccccccCCC---CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEG---RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
...... .....|+..|+|||++.+. .++.++||||+||++|||++|+.||..... ..+ .+.+
T Consensus 158 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~--------~~~~ 222 (288)
T cd06616 158 LVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFD--------QLTQ 222 (288)
T ss_pred hccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHH--------HHhh
Confidence 543321 1233578889999988765 689999999999999999999999865321 000 1111
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
+........ ....+..++..+.+++.+||+.+|++|||+.|++++-
T Consensus 223 ~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~ 268 (288)
T cd06616 223 VVKGDPPIL---SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP 268 (288)
T ss_pred hcCCCCCcC---CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 111110000 0001123456789999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=259.06 Aligned_cols=266 Identities=23% Similarity=0.234 Sum_probs=202.1
Q ss_pred CCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.|...++||+|.||+||+|+ +.+++.||+|+++-+ ++.......+||-+++.++|.|||+++++..... ...+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdk----kltl 78 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK----KLTL 78 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCc----eeEE
Confidence 46667899999999999998 556899999988743 4456678899999999999999999999876555 4568
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+|||+. +|..+...-.+.++...++.++.|+.+|+.++| ++.+.|||+||+|.+|+.+|+.|++|||+|+.++-+
T Consensus 79 vfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 79 VFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred eHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 9999965 999999888888999999999999999999999 999999999999999999999999999999988754
Q ss_pred CceeeeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHh------hhhh
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLL------ISIM 935 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~------~~~~ 935 (1002)
-. ..+..+.|.+|.+|.++-+.+ |+...|+||-||++.|+.. |++.|.+..-++ ++......... ..+.
T Consensus 155 vr--cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvdd-qlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 155 VR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred eE--eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHH-HHHHHHHHhCCCccccCCccc
Confidence 33 335567899999999987765 8999999999999999998 555565533222 23222221110 0122
Q ss_pred hcccCccCChhhhHHHhH----HHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAK----EQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+.-|-...... ...... +.....=.+++++.+.-+|..|.+++++++|
T Consensus 232 ~lpdyk~yp~y-pattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 232 KLPDYKPYPIY-PATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred cCCCCcccCCc-cccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 22222111110 000111 1222334678888889999999999999886
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=327.02 Aligned_cols=273 Identities=16% Similarity=0.152 Sum_probs=189.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--CCcEEEEEEe--------------ec---ccchhHHHHHHHHHHHHhccCCCcc
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--DGMEVAVKVF--------------NQ---QCGRAFKSFDVECEVMKSIRHRNII 765 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~--------------~~---~~~~~~~~~~~E~~~l~~l~h~niv 765 (1002)
.++|++.+.||+|+||+||++..+ .+..+++|.+ .+ ........+++|++++++++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 468999999999999999998643 2222222211 11 1122345678999999999999999
Q ss_pred eeeeEEecCchhhHHHHHhhccCCCCChhHhhhccC----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCe
Q 037042 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNV 841 (1002)
Q Consensus 766 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NI 841 (1002)
++++++...+ ..++|+|++. +++.+++.... .......+..++.||+.||+||| +++|+||||||+||
T Consensus 227 ~l~~~~~~~~----~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NI 298 (501)
T PHA03210 227 KIEEILRSEA----NTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENI 298 (501)
T ss_pred cEeEEEEECC----eeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHE
Confidence 9999998776 5678999985 57877775432 12335567789999999999999 89999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCC-Cccccc-cc
Q 037042 842 LLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP-TNEIFN-EG 919 (1002)
Q Consensus 842 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P-~~~~~~-~~ 919 (1002)
|++.++.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||++|||++|..+ +..... ..
T Consensus 299 Ll~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~ 377 (501)
T PHA03210 299 FLNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPG 377 (501)
T ss_pred EECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHH
Confidence 9999999999999999876543221 22345789999999999999999999999999999999998865 332211 11
Q ss_pred ccHHHHHHHHH--hh-------hhhhcccCccCC---hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 920 MTLKHWVNDWL--LI-------SIMKIVDGSLLS---REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 920 ~~~~~~~~~~~--~~-------~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+.+.+.... .+ .+...++..... ............+..+.+++.+|+++||.+|||+.|+++|-.
T Consensus 378 ~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 378 KQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 11111111100 00 000000000000 000001111123456788899999999999999999998743
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=308.23 Aligned_cols=267 Identities=21% Similarity=0.297 Sum_probs=193.1
Q ss_pred ceeecc--CcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRG--GFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
..||+| +||+||+|+.. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++ ..++|+|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~----~~~~v~e 79 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS----WLWVISP 79 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC----ceEEEEe
Confidence 346666 99999999864 79999999987532 234577889999999999999999999998776 6789999
Q ss_pred cCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 787 YMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
|+.++++.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+........
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~ 156 (328)
T cd08226 80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ 156 (328)
T ss_pred cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence 999999999987643 25888899999999999999999 89999999999999999999999999986543322111
Q ss_pred eee-----eccCCCCcccccccccCCC--CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH---------H
Q 037042 866 FVT-----QTQTPATIGYMALEYGSEG--RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND---------W 929 (1002)
Q Consensus 866 ~~~-----~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~---------~ 929 (1002)
... .....++..|+|||++.+. .++.++||||+||++|||++|+.||........ ....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPLDITT 235 (328)
T ss_pred cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCccccc
Confidence 000 0112345679999998764 478999999999999999999999976432111 0000000 0
Q ss_pred Hhhhhhhc-----------ccCc-------cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 930 LLISIMKI-----------VDGS-------LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 930 ~~~~~~~i-----------~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.......+ .+.. ...........+..+...+.+++.+||+.+|++|||+.|+++|-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 00000000 0000 000000111123346678999999999999999999999998743
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=298.63 Aligned_cols=245 Identities=24% Similarity=0.301 Sum_probs=196.7
Q ss_pred eeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 714 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
||.|+||.||+|+.. +++.||+|++.+.. ....+.+..|+.++++++||||+++++++..+. ..++|+||++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~ 76 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK----YIYMLMEYCL 76 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC----ccEEEEecCC
Confidence 689999999999865 58999999987542 234567889999999999999999999987766 6789999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeee
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 869 (1002)
+++|.+++.+.. .+++..+..++.||++|++|+| +.+++|+||||+||+++.++.++|+|||++....... ..
T Consensus 77 ~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~ 149 (262)
T cd05572 77 GGELWTILRDRG-LFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KT 149 (262)
T ss_pred CCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cc
Confidence 999999997654 4888999999999999999999 8999999999999999999999999999998765432 11
Q ss_pred ccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhH
Q 037042 870 TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949 (1002)
Q Consensus 870 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 949 (1002)
....++..|+|||......++.++|+||+|+++|||++|..||.....+. ..... ++.++....
T Consensus 150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~--------~~~~~~~~~----- 213 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYN--------DILKGNGKL----- 213 (262)
T ss_pred ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHH--------HHhccCCCC-----
Confidence 23467888999999888889999999999999999999999997643211 11111 111100000
Q ss_pred HHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHHH
Q 037042 950 FVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRLL 986 (1002)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L~ 986 (1002)
..+...+..+.+++.+||+.+|++||+ ++|+++|-+
T Consensus 214 -~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~ 254 (262)
T cd05572 214 -EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKW 254 (262)
T ss_pred -CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChh
Confidence 011223567899999999999999999 788887644
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=305.41 Aligned_cols=254 Identities=25% Similarity=0.301 Sum_probs=196.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC-CcEEEEEEeeccc-chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|...+ ++.||||++.... ......+..|+.++.+.. ||||+++++++.... ..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~ 89 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS----DV 89 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC----eE
Confidence 3568889999999999999998764 8999999987543 234455667887777764 999999999998766 67
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
++||||+. +++.+++......+++..+..++.|+++|++||| + .+|+||||+|+||++++++.+||+|||++..+
T Consensus 90 ~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 90 FICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred EEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 89999985 4788877665557899999999999999999999 5 58999999999999999999999999999766
Q ss_pred cCCCceeeeccCCCCcccccccccCCCC----cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGR----VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
..... .....++..|+|||.+.+.. ++.++|||||||++|||++|+.||.....+...+ ..
T Consensus 166 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~------------~~ 230 (296)
T cd06618 166 VDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVL------------TK 230 (296)
T ss_pred cCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHH------------HH
Confidence 43322 12345778899999876543 7899999999999999999999986532111101 11
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+......... ....++..+.+++.+||+.+|++||++.+++++-+
T Consensus 231 ~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 231 ILQEEPPSLP-----PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred HhcCCCCCCC-----CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 1111110000 00123456899999999999999999999998865
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=304.56 Aligned_cols=271 Identities=21% Similarity=0.228 Sum_probs=196.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCch-hhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDF-KALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~-~~~~ 780 (1002)
++|+..+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.+++++. ||||+++++++...+. ....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999864 68999999876542 223467888999999995 6999999998876542 1123
Q ss_pred HHHhhccCCCCChhHhhhccC----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEeccc
Q 037042 781 KALALEYMPHGSLEKYLYSSN----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDFG 855 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfG 855 (1002)
.++||||+++ ++.+++.... ..+++..++.++.||++||+||| .++|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 5799999986 8988876532 25789999999999999999999 899999999999999998 8999999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh-
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS- 933 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~- 933 (1002)
++........ ......+++.|+|||++.+ ..++.++|||||||++|||++|..||........ ............
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ 233 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFKLLGTPTE 233 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHhCCCCh
Confidence 9876543221 1223356788999998755 4579999999999999999999999875322110 111111000000
Q ss_pred -----hhhcccCc---cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 934 -----IMKIVDGS---LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 934 -----~~~i~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.....+.. ........ ...+..+..+.+++.+||.++|.+||++.|++.|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLS-RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhCcchhhccchhhcCcccchhHH-HhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000 00000000 0112345778999999999999999999999876
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=300.14 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=197.9
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc-----cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ-----CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|+..+.||+|+||.||+|+. .+++.||+|++... .......+.+|++++++++||||+++++++......
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~-- 79 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEK-- 79 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCC--
Confidence 4688899999999999999985 46899999987532 123456788999999999999999999988654321
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|+||+++++|.+++.... .+++..+..++.||++|++||| +.+|+||||||+||+++.++.++|+|||+++.
T Consensus 80 ~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 80 KLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 3458999999999999987654 3788899999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .......++..|+|||+..+..++.++|||||||++|||++|+.||...... .. +.++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~---------~~~~~ 222 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----AA---------IFKIA 222 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----HH---------HHHHH
Confidence 5431110 1112345888999999988888999999999999999999999999753111 00 11111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..... ...+....+.+.+++.+||. .|.+||++.+++.|
T Consensus 223 ~~~~~------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 223 TQPTK------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred cCCCC------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 00000 01123345678999999999 57999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=307.44 Aligned_cols=265 Identities=18% Similarity=0.204 Sum_probs=190.6
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
+.+|.|+++.||+++. +++.||||++... .....+.+..|++++++++||||+++++++...+ ..+++|||++
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~----~~~~~~e~~~ 82 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS----ELYVVSPLMA 82 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC----eEEEEEeccC
Confidence 3344444444444443 6899999998754 3445678999999999999999999999988766 5689999999
Q ss_pred CCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce--
Q 037042 790 HGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF-- 866 (1002)
Q Consensus 790 ~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~-- 866 (1002)
+|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 99999999764 235788899999999999999999 899999999999999999999999999998765432211
Q ss_pred ---eeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH---Hhh------
Q 037042 867 ---VTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW---LLI------ 932 (1002)
Q Consensus 867 ---~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~---~~~------ 932 (1002)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||................. ...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 11123456778999998765 3588999999999999999999999976432211111000000 000
Q ss_pred --hhhh----cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 --SIMK----IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 --~~~~----i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... ..+... ...............+.+++.+||+.+|++|||+.++++|-.
T Consensus 240 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 240 EDSMSQSRSSNEHPNN--RDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred cCCcCcccccccccch--hhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 0000 000000 000111112234567889999999999999999999998844
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-33 Score=302.42 Aligned_cols=264 Identities=22% Similarity=0.227 Sum_probs=200.7
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
|+..+.||+|++|.||+|... +++.+|+|++..... .....+..|++++++++|+||+++++++..++ ..++|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v 76 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG----DLYLV 76 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC----CEEEE
Confidence 567789999999999999864 689999999875432 34567888999999999999999999987765 66899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
+||+++ ++.+++......+++..+..++.|+++|++||| ..+|+|+||||+||++++++.+||+|||.+.......
T Consensus 77 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 77 FEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred EeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 999975 898888776556899999999999999999999 8999999999999999999999999999998765443
Q ss_pred ceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--h-hhhccc-
Q 037042 865 QFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--S-IMKIVD- 939 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~-~~~i~~- 939 (1002)
. ......++..|+|||...+. .++.++||||+||++|+|++|+.||......+. ........... . ...+.+
T Consensus 153 ~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05118 153 R--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIFRTLGTPDPEVWPKFTSL 229 (283)
T ss_pred c--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCchHhcccchhh
Confidence 1 12334577889999987766 689999999999999999999999865432110 11100000000 0 000000
Q ss_pred --------CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 940 --------GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 940 --------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+...... .....+..+..+.+++.+||+++|.+||++.+++.|
T Consensus 230 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 230 ARNYKFSFPKKAGMP--LPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhccccccC--HHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000000 001123456789999999999999999999999876
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=309.01 Aligned_cols=275 Identities=21% Similarity=0.254 Sum_probs=200.9
Q ss_pred HhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA- 778 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~- 778 (1002)
...++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+..|++++++++||||+++++++.......
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3467899999999999999999974 479999999986432 223456788999999999999999999886544211
Q ss_pred -HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 779 -LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 779 -~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
...++||||+ +++|.+++... .+++..+..++.||++|++||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 1236899999 77998888643 4889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHH-----------
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHW----------- 925 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~----------- 925 (1002)
....... ....++..|+|||++.+ ..++.++||||+||++|+|++|+.||....... .....
T Consensus 166 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 166 RQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTGTPSKEF 239 (343)
T ss_pred cccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHH
Confidence 7654321 23456888999998765 458899999999999999999999997532210 01111
Q ss_pred HHHHHhhhhhhcccCcc-CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhcc
Q 037042 926 VNDWLLISIMKIVDGSL-LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIND 990 (1002)
Q Consensus 926 ~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~ 990 (1002)
................. ....... ...+.+...+.+++.+|++.+|++|||+.++++| ++.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDFR-SLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchHH-HhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 00000000000000000 0000000 0112345678899999999999999999999966 444443
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=294.13 Aligned_cols=252 Identities=22% Similarity=0.312 Sum_probs=201.0
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
+.|+.-++||+|+||.||-.+. .+|+.+|.|.+.+.. .........|-.+++++..+.||.+--.|...+ ..
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd----~L 260 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD----AL 260 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC----ce
Confidence 4577889999999999999875 479999999886542 223456778999999999999999977777777 78
Q ss_pred HHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|+|+..|.||+|.=++...+. .+++..++.+|.+|+.||++|| ..+||+||+||+|||+|+.|+++|+|.|+|..+
T Consensus 261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEec
Confidence 999999999999888877653 6899999999999999999999 999999999999999999999999999999988
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
...+.. ...+||.+|||||++..+.|+..+|.||+||++|||+.|+.||..--.- . .| ++ +|+
T Consensus 338 ~~g~~~---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK-v---k~------eE----vdr 400 (591)
T KOG0986|consen 338 PEGKPI---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK-V---KR------EE----VDR 400 (591)
T ss_pred CCCCcc---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh-h---hH------HH----HHH
Confidence 776543 4558999999999999999999999999999999999999998652111 0 00 01 111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
+..... ...++.-+++..++-+..+..||.+|. .++||-+|
T Consensus 401 r~~~~~---~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 401 RTLEDP---EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred HHhcch---hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 111000 001123345677888889999999997 45566655
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=300.79 Aligned_cols=244 Identities=21% Similarity=0.290 Sum_probs=192.1
Q ss_pred eeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 714 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
||+|+||+||+|... +|+.||+|++.+.. ......+..|++++++++||||+++++++...+ ..++||||++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~ 76 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD----DLCLVMTLMN 76 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC----eEEEEEecCC
Confidence 689999999999754 68999999987532 223445678999999999999999999987765 5689999999
Q ss_pred CCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceee
Q 037042 790 HGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868 (1002)
Q Consensus 790 ~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 868 (1002)
+++|.+++..... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.+||+|||.+....... .
T Consensus 77 ~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~ 150 (277)
T cd05577 77 GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---K 150 (277)
T ss_pred CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---c
Confidence 9999999876543 5889999999999999999999 8999999999999999999999999999987654321 1
Q ss_pred eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhh
Q 037042 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDI 948 (1002)
Q Consensus 869 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 948 (1002)
.....++..|+|||+..+..++.++||||+||++|+|++|+.||........ ...... .+....
T Consensus 151 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~--------~~~~~~------- 214 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KEELKR--------RTLEMA------- 214 (277)
T ss_pred cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HHHHHh--------cccccc-------
Confidence 2334577889999998888899999999999999999999999965432111 000000 000000
Q ss_pred HHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 949 QFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 949 ~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
...+...+..+.+++.+||+.+|++|| ++.+++.|
T Consensus 215 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 215 -VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred -ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 001122356688999999999999999 77778876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=295.98 Aligned_cols=249 Identities=25% Similarity=0.334 Sum_probs=202.5
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|+||.||+|... ++..||+|++..... ...+.+..|++++++++|||++++++.+..++ ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~----~~~l 76 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKG----KLCI 76 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCC----EEEE
Confidence 4778899999999999999865 689999999875432 45677889999999999999999999887765 5679
Q ss_pred hhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|+||+++++|.+++.... ..+++..+..++.++++|++||| +.+++|+||+|+||+++.++.++|+|||.+...
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 153 (258)
T cd08215 77 VMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVL 153 (258)
T ss_pred EEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeec
Confidence 999999999999997753 56899999999999999999999 889999999999999999999999999999866
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......|++.|+|||...+..++.++||||+|+++++|++|+.||..... ........ ..
T Consensus 154 ~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~--------~~ 218 (258)
T cd08215 154 SSTVD--LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKIL--------KG 218 (258)
T ss_pred ccCcc--eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHh--------cC
Confidence 54331 22334678889999998888899999999999999999999999865321 11111111 10
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.... .+...+..+.+++.+||..+|++||++.|++++
T Consensus 219 ~~~~-------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 219 QYPP-------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 011234678899999999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=305.70 Aligned_cols=252 Identities=23% Similarity=0.321 Sum_probs=198.3
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.|+..+.||+|+||.||+|+.. +++.||+|.+... .......+.+|+++++.++|+|++++++++.... ..+
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 91 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH----TAW 91 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC----eeE
Confidence 4667788999999999999854 6889999988642 2234456788999999999999999999988765 667
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+. |++.+.+......+++.++..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 92 lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 92 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 9999996 5888877655556899999999999999999999 89999999999999999999999999999876543
Q ss_pred CCceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
. ....++..|+|||++. ...++.++|||||||++|||++|+.||....... ... .+..
T Consensus 168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~--------~~~~ 228 (308)
T cd06634 168 A------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALY--------HIAQ 228 (308)
T ss_pred c------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-----HHH--------HHhh
Confidence 2 2345788899999864 3567899999999999999999999986531110 000 0000
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
...... .....+..+.+++.+||.++|++||++.+++++-+-.+..
T Consensus 229 ~~~~~~------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 229 NESPAL------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred cCCCCc------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 000000 0112456688999999999999999999999997766543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=300.28 Aligned_cols=244 Identities=27% Similarity=0.353 Sum_probs=193.1
Q ss_pred eeccCcceEEEEEeC-CCcEEEEEEeecccc---hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 714 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++..+. ..++|+||++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~ 76 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK----NLYLVMEYLP 76 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc----EEEEEEecCC
Confidence 689999999999876 599999999875432 34567888999999999999999998887665 5689999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc----
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ---- 865 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~---- 865 (1002)
+++|.+++.+.+ .+++..+..++.||++||+||| ..+++||||+|+||++++++.++|+|||++........
T Consensus 77 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 77 GGDLASLLENVG-SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 999999998755 5899999999999999999999 89999999999999999999999999999876443211
Q ss_pred --eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 866 --FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 866 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
........++..|+|||......++.++||||||+++||+++|..||...... .... .+......
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~--------~~~~~~~~ 219 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIFQ--------NILNGKIE 219 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHhcCCcC
Confidence 11223445788899999988888999999999999999999999999753221 1111 11111111
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH---HHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA---KEIVTR 984 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~---~evl~~ 984 (1002)
.... ...+..+.+++.+||+.+|++|||+ .|++++
T Consensus 220 ~~~~------~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 220 WPED------VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred CCcc------ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 1110 0125678899999999999999999 555543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=308.44 Aligned_cols=278 Identities=23% Similarity=0.223 Sum_probs=206.2
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch-hhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF-KALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 782 (1002)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+. .....+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999865 58999999987643 3445778899999999999999999998876531 112457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||++ ++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||++.....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 9999997 48998887654 6899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCce-eeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH----------
Q 037042 863 EDQF-VTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL---------- 930 (1002)
Q Consensus 863 ~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~---------- 930 (1002)
.... .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||........ .........
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHhcCCCChhHhhhc
Confidence 3210 112344578889999998877 789999999999999999999999976432110 000000000
Q ss_pred -hhhhhhcccC-ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhccc
Q 037042 931 -LISIMKIVDG-SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKINDL 991 (1002)
Q Consensus 931 -~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~~ 991 (1002)
.......... .......... .....+..+.+++.+||+++|++||++.++++| ++.++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSK-LFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred cccchhhHHhhcccCCcchhHH-hcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0000000000 0000000000 112245678999999999999999999999997 6666653
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=306.90 Aligned_cols=268 Identities=23% Similarity=0.252 Sum_probs=197.7
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..+++|+..+.||+|+||.||+|... +++.||||++.+.. ....+.+..|++++++++||||+++++++.....
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--- 83 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE--- 83 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC---
Confidence 45778999999999999999999754 79999999886432 2345677889999999999999999998865321
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|+||+ +++|.+++... .+++.....++.|+++|++||| +.+|+||||||+||++++++.+||+|||.+..
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 456899998 56898888643 3788888899999999999999 89999999999999999999999999999875
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccc----------cHHHHHHH
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM----------TLKHWVND 928 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~----------~~~~~~~~ 928 (1002)
..... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ...++...
T Consensus 158 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 158 QDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred cCCCc-----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 43221 23456788999998765 5689999999999999999999999965322100 00111111
Q ss_pred HHhhhhhhcccC-ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 929 WLLISIMKIVDG-SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 929 ~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.......++... .......... ..+.+...+.++|.+|++.+|++||++.+++.+=
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~ 289 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSE-KFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHH-HcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 100000000000 0000000000 0012346789999999999999999999999883
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.7e-32 Score=297.03 Aligned_cols=269 Identities=23% Similarity=0.267 Sum_probs=196.6
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhc---cCCCcceeeeEEecCch-hhHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSI---RHRNIIKIISCCSIGDF-KALF 780 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~-~~~~ 780 (1002)
|++.+.||+|+||.||+|+.. +++.||+|+++... ......+..|+.+++++ +||||+++++++...+. ....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999976 58999999987432 22234566788877766 59999999999877652 1123
Q ss_pred HHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.+++|||+++ +|.+++..... .+++..+..++.|+++||+||| +.+++|+||+|+||++++++.+||+|||++..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 6799999975 89888876433 5899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc-
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV- 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~- 938 (1002)
....... ....++..|+|||+..+..++.++|||||||++|||++|++||...... .....+.............
T Consensus 157 ~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFEMAL---TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCCccc---ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcCC
Confidence 6543221 2335788899999998888999999999999999999999998753221 1111111111000000000
Q ss_pred c----C-ccCChhhh-HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 939 D----G-SLLSREDI-QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 939 ~----~-~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. . ........ ...........+.+++.+||+.+|++||++.|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0 0 00000000 001112345678899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-32 Score=301.44 Aligned_cols=246 Identities=22% Similarity=0.285 Sum_probs=195.7
Q ss_pred CCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 710 ENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
...+||+|+||.||+|.. .+++.||||++..........+..|+.+++.++|+||+++++++..++ ..++||||+
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~ 99 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD----ELWVVMEFL 99 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC----EEEEEEecC
Confidence 346799999999999986 478999999986554455677889999999999999999999998776 668999999
Q ss_pred CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceee
Q 037042 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868 (1002)
Q Consensus 789 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 868 (1002)
++++|.+++... .+++.....++.|++.|++||| +.+++||||||+||+++.++.++|+|||++........ .
T Consensus 100 ~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~ 172 (292)
T cd06657 100 EGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 172 (292)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--c
Confidence 999999987543 3788999999999999999999 88999999999999999999999999999876543221 1
Q ss_pred eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhh
Q 037042 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDI 948 (1002)
Q Consensus 869 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 948 (1002)
.....|+..|+|||...+..++.++||||+||++|||++|..||...... ....... ........
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~--------~~~~~~~~----- 237 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIR--------DNLPPKLK----- 237 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH--------hhCCcccC-----
Confidence 12345788999999988888899999999999999999999998652111 0001000 00000000
Q ss_pred HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 949 QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 949 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
....++..+.+++.+||..+|.+||++.++++|
T Consensus 238 ---~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 238 ---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred ---CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 001234567889999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-32 Score=303.91 Aligned_cols=275 Identities=23% Similarity=0.226 Sum_probs=200.1
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch---
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--- 776 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 776 (1002)
...++|++.+.||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++.....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578999999999999999999865 68999999987543 2234567789999999999999999998865431
Q ss_pred ---hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 777 ---KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 777 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
.....++|+||+++ ++.+++......+++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCc
Confidence 01145799999976 777777765556899999999999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
||++........ .......++..|+|||...+ ..++.++||||+||++|||++|++||...... ..+..........
T Consensus 160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~ 237 (302)
T cd07864 160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLELISRLCGSP 237 (302)
T ss_pred ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCC
Confidence 999987654332 11123345778999997754 35789999999999999999999999753211 1111111100000
Q ss_pred h---hhhc--------ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 933 S---IMKI--------VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 933 ~---~~~i--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. ...+ .+........... .....+..+.+++.+||+.+|++||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLRE-EFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred Chhhcccccccccccccccccccccchhh-hcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0000 0000000000000 111235678999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-34 Score=280.71 Aligned_cols=253 Identities=23% Similarity=0.243 Sum_probs=190.3
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-hhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+....||.|+||+|+|...+ .|+.+|||+++.... ...+++..|.+...+- +.||||++||.+..++ ..|++
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG----dcWiC 141 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG----DCWIC 141 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC----ceeee
Confidence 334467999999999998754 699999999986543 5567888888875554 7899999999875554 56899
Q ss_pred hccCCCCChhHhhh---c-cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 785 LEYMPHGSLEKYLY---S-SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~---~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
||.|+- +++.+-. . .+..+++...-.|+...+.||.||.. ...|||||+||+|||++..|.+|+||||++..+
T Consensus 142 MELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 142 MELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred HHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 999954 7655432 2 23368888888899999999999986 678999999999999999999999999999766
Q ss_pred cCCCceeeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
...- ..+..+|-..|||||.+.. ..|+.++||||+|++++|+.||..|+..+. . ..+++..++
T Consensus 219 v~Si---AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~----------s--vfeql~~Vv 283 (361)
T KOG1006|consen 219 VDSI---AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD----------S--VFEQLCQVV 283 (361)
T ss_pred HHHH---HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH----------H--HHHHHHHHH
Confidence 4321 2244567788999997653 359999999999999999999999986632 2 122333333
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.+....-.... ...+....+..++..|+.+|-..||+..++.++
T Consensus 284 ~gdpp~l~~~~--~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 284 IGDPPILLFDK--ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cCCCCeecCcc--cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 33221111000 001234568899999999999999999998765
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-32 Score=294.84 Aligned_cols=248 Identities=28% Similarity=0.381 Sum_probs=201.3
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|+..+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|||++++++++..+. ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~ 76 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD----SLYI 76 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC----EEEE
Confidence 4778899999999999999855 688999999876543 45678899999999999999999999987765 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++++|.+++.... .+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||.+......
T Consensus 77 v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 77 ILEYAENGSLRQIIKKFG-PFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred EEecCCCCcHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 999999999999997663 5899999999999999999999 899999999999999999999999999999876543
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
... .....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ...... .......
T Consensus 153 ~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~---------~~~~~~~ 217 (254)
T cd06627 153 SKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFR---------IVQDDHP 217 (254)
T ss_pred ccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHH---------HhccCCC
Confidence 321 2334678899999998887789999999999999999999999875321 111100 0000000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..+...+..+.+++.+|+..+|++||++.|++.+
T Consensus 218 -------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 218 -------PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred -------CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 0112234678899999999999999999999864
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-32 Score=302.32 Aligned_cols=266 Identities=22% Similarity=0.231 Sum_probs=195.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|+..+.||+|++|+||+|+.. +|+.||+|++.... ......+..|++++++++||||+++++++.... ..+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 77 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK----RLY 77 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC----eEE
Confidence 46888999999999999999865 68999999986432 233466788999999999999999999998766 678
Q ss_pred HhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEecccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDFGITKLL 860 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~ 860 (1002)
+||||++ +++.+++..... ..++..+..++.||+.||+||| +++|+||||||+||+++. ++.+||+|||++...
T Consensus 78 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 78 LVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred EEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 9999996 488887755433 3678888899999999999999 899999999999999985 567999999999765
Q ss_pred cCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... ......++..|+|||++.+. .++.++||||+||++|+|+||+.||......+. ........ ........+
T Consensus 154 ~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~~~~-~~~~~~~~~ 229 (294)
T PLN00009 154 GIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIFRIL-GTPNEETWP 229 (294)
T ss_pred CCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHh-CCCChhhcc
Confidence 43211 11334568889999987654 578999999999999999999999975322111 11110000 000000000
Q ss_pred Cc----------cC-ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 940 GS----------LL-SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 940 ~~----------~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+. .. ...... ...+..+..+.+++.+|++.+|++||++.++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 230 GVTSLPDYKSAFPKWPPKDLA-TVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred ccccchhhhhhcccCCCCCHH-HhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 00 000000 0112234668899999999999999999999986
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.8e-34 Score=277.70 Aligned_cols=283 Identities=19% Similarity=0.254 Sum_probs=206.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeec--ccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh---
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQ--QCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA--- 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--- 778 (1002)
...|....+||+|.||+||+|+. ++|+.||+|++-. +.+.......+|+++++.++|+|++.+++.|.......
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 34577788999999999999984 4688899986532 22344567788999999999999999998886533221
Q ss_pred -HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 779 -LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 779 -~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
...++||++|+. +|...+......++..++.++++++..||.|+| ...|+|||+||+|+||+.+|.+||+|||++
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 235899999987 999998777667999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCc--eeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh---
Q 037042 858 KLLTREDQ--FVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL--- 931 (1002)
Q Consensus 858 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~--- 931 (1002)
+.+...+. ...++..+.|.+|.+||.+.+ ..|+++.|||.-|||+.||+||.+-+....+... + +.++....
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqq-l-~~Is~LcGs~t 249 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ-L-HLISQLCGSIT 249 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHH-H-HHHHHHhccCC
Confidence 87654432 223466677999999997766 4599999999999999999999988766433211 1 11111100
Q ss_pred -h--------hhhhcccCccCChhhhHHH----hHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 932 -I--------SIMKIVDGSLLSREDIQFV----AKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 932 -~--------~~~~i~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
+ .+.+-+.-........+.. .+-.-.+...+++.+++..||.+|+.+.+++.|-.-.++..+
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 0 0111110000000000000 000012367899999999999999999999999776665443
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-32 Score=308.04 Aligned_cols=275 Identities=20% Similarity=0.220 Sum_probs=200.4
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecC
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIG 774 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1002)
..++....++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 345566788999999999999999999974 578999999987542 22345677899999999999999999988643
Q ss_pred chh--hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEe
Q 037042 775 DFK--ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLS 852 (1002)
Q Consensus 775 ~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 852 (1002)
... ....+++++++ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||++++++.+||+
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~ 162 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 162 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEe
Confidence 311 11345777776 77998887654 3889999999999999999999 8999999999999999999999999
Q ss_pred cccccccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
|||+++..... .....++..|+|||+..+ ..++.++|||||||++|||++|+.||...... ............
T Consensus 163 dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~ 236 (345)
T cd07877 163 DFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGT 236 (345)
T ss_pred ccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 99998764322 133467888999998765 56889999999999999999999998653221 111111110000
Q ss_pred --hhh-hhcccC----------ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 --ISI-MKIVDG----------SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 --~~~-~~i~~~----------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+ ..+.+. .......... .......+.+++.+|++.+|++||++.+++.|=.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANV--FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhh--cCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 000 000000 0000000000 0012456889999999999999999999998854
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-32 Score=309.63 Aligned_cols=271 Identities=19% Similarity=0.222 Sum_probs=196.0
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh------
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA------ 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~------ 778 (1002)
.+|+..+.||+|+||+||+|.. .+|+.||+|++........+.+.+|++++++++||||+++++++.......
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5789999999999999999985 468999999987665556677889999999999999999998766543211
Q ss_pred ----HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEec
Q 037042 779 ----LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLSD 853 (1002)
Q Consensus 779 ----~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~D 853 (1002)
...++||||++ ++|.+++... .+++..++.++.||++|++||| +.+|+||||||+||+++ +++.+|++|
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECC
Confidence 13469999997 5898888643 4789999999999999999999 89999999999999997 456789999
Q ss_pred ccccccccCCCcee-eeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 854 FGITKLLTREDQFV-TQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 854 fGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
||+++......... ......++..|+|||+... ..++.++|||||||++|||++|+.||........ ..........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~ 237 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILESVPV 237 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCC
Confidence 99997654322111 1123357888999997644 5578999999999999999999999975422110 0000000000
Q ss_pred ------hh----hhh-cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 932 ------IS----IMK-IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 932 ------~~----~~~-i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.. ... +............. ..+.....+.+++.+|++++|++|||+.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRD-LLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHH-HccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00 000 00000000000000 011234668899999999999999999999977
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-32 Score=306.42 Aligned_cols=272 Identities=19% Similarity=0.181 Sum_probs=194.5
Q ss_pred CCCCCceeeccCcceEEEEEeC-C--CcEEEEEEeeccc--chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-D--GMEVAVKVFNQQC--GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
+|+..+.||+|+||.||+|+.. . +..||+|++.... ....+.+.+|+++++++ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777899999999999999854 4 7889999986432 22346678899999999 599999999876443222224
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++++||+. ++|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 567888885 68999886544 4889999999999999999999 899999999999999999999999999999866
Q ss_pred cCCCce--eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHH-----------HHH
Q 037042 861 TREDQF--VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLK-----------HWV 926 (1002)
Q Consensus 861 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~-----------~~~ 926 (1002)
...... .......||..|+|||+..+ ..++.++||||+||++|+|++|+.||....... ... .+.
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQVLGTPDEETL 234 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 533221 11133468899999998665 468999999999999999999999986532110 000 111
Q ss_pred HHHHhhhhhhcccCcc-CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 927 NDWLLISIMKIVDGSL-LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
................ ....... .....+...+.+++.+|++++|++|||+.|++++=
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~ 293 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEHP 293 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 1000000000000000 0000000 00112346788999999999999999999999873
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-32 Score=295.42 Aligned_cols=247 Identities=24% Similarity=0.313 Sum_probs=199.7
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+|++.+.||+|+||.||+|+.. +++.+|+|++.... ......+..|++++++++|+||+++++++.... ..++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~ 76 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGN----KLCI 76 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC----EEEE
Confidence 4778899999999999999754 68899999987542 233566778999999999999999999887665 5679
Q ss_pred hhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|+||+++++|.+++.+. +..+++..+..++.|+++|++||| +.+++||||+|+||+++.++.+|++|||++...
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~ 153 (256)
T cd08530 77 VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVL 153 (256)
T ss_pred EehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhh
Confidence 99999999999998662 235888999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .....++..|+|||...+..++.++|+||+|+++|||++|+.||...... ..... +...
T Consensus 154 ~~~~----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-----~~~~~--------~~~~ 216 (256)
T cd08530 154 KKNM----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-----DLRYK--------VQRG 216 (256)
T ss_pred ccCC----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HhcC
Confidence 5431 12345788899999998888999999999999999999999999754221 11110 0001
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.... .+......+.+++.+|++.+|++||++.|+++|
T Consensus 217 ~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 217 KYPP-------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCC-------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 112345678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-32 Score=295.64 Aligned_cols=244 Identities=20% Similarity=0.271 Sum_probs=186.5
Q ss_pred eeeccCcceEEEEEe-CCCcEEEEEEeecccc---hhHHHHHHHHH---HHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 713 LIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG---RAFKSFDVECE---VMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 713 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.||+|+||.||+|+. .+++.||+|++.+... .....+..|.. .++...||+|+++++++...+ ..++||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~v~ 76 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD----KLSFIL 76 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC----EEEEEE
Confidence 489999999999975 4689999999875421 11122333433 444457999999999888766 567999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++|+|.+++...+ .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 77 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~ 152 (278)
T cd05606 77 DLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 152 (278)
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC
Confidence 9999999999887544 5899999999999999999999 89999999999999999999999999999876543221
Q ss_pred eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 866 FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
....|+..|+|||+..++ .++.++||||+||++|||++|+.||........ ..... ........
T Consensus 153 ----~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~------~~~~~~~~--- 217 (278)
T cd05606 153 ----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDR------MTLTMAVE--- 217 (278)
T ss_pred ----cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHH------HhhccCCC---
Confidence 234688999999997654 689999999999999999999999976422111 00000 00000000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
.+...+..+.+++.+|+..+|.+|| ++.|+++|-+
T Consensus 218 -------~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~ 257 (278)
T cd05606 218 -------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPF 257 (278)
T ss_pred -------CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcc
Confidence 1112346788999999999999999 9999998743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-32 Score=300.84 Aligned_cols=244 Identities=24% Similarity=0.294 Sum_probs=192.8
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
|...+.||+|+||+||+|+.. +|+.||+|++.... ......+..|++++++++|||++++++++...+ ..++
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~l 98 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH----TAWL 98 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC----EEEE
Confidence 666678999999999999854 68999999987432 234466788999999999999999999998776 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+. |++.+++......+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 99 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~ 174 (313)
T cd06633 99 VMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA 174 (313)
T ss_pred EEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCC
Confidence 999996 5888888766667899999999999999999999 899999999999999999999999999998643221
Q ss_pred CceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
....|+..|+|||++. ...++.++|||||||++|||++|..||....... .... +...
T Consensus 175 ------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-----~~~~--------~~~~ 235 (313)
T cd06633 175 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYH--------IAQN 235 (313)
T ss_pred ------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHH--------HHhc
Confidence 2346788899999874 4568899999999999999999999986532110 0000 0000
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..... .....+..+.+++.+||+++|.+||++.+++++
T Consensus 236 ~~~~~------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 236 DSPTL------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCCC------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 011223468899999999999999999999987
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=297.10 Aligned_cols=243 Identities=23% Similarity=0.284 Sum_probs=186.7
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeecccc---hhHHHHHHHHHHH-HhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---RAFKSFDVECEVM-KSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||.||+|... +|+.||||++.+... .....+..|..++ ...+|+||+++++++..++ ..++|+|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e 77 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD----YLYLVME 77 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC----eEEEEEe
Confidence 56899999999999864 689999999875421 1223344555544 3458999999999998766 6689999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++++|.+++...+ .+++..+..++.|+++||.||| +.+++||||+|+||+++.++.+||+|||++......
T Consensus 78 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 150 (260)
T cd05611 78 YLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN--- 150 (260)
T ss_pred ccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceecccc---
Confidence 999999999997654 4888999999999999999999 899999999999999999999999999998754321
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
....++..|+|||...+..++.++||||+|+++|||++|..||..... ......... .......
T Consensus 151 ---~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~--------~~~~~~~ 214 (260)
T cd05611 151 ---KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAVFDNILS--------RRINWPE 214 (260)
T ss_pred ---ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHh--------cccCCCC
Confidence 234578889999998888899999999999999999999999965322 111111100 0000000
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCH---HHHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINA---KEIVTRL 985 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~---~evl~~L 985 (1002)
. ....++..+.+++.+||+.+|++||++ +|++.|-
T Consensus 215 ~----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~ 252 (260)
T cd05611 215 E----VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHP 252 (260)
T ss_pred c----ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcCh
Confidence 0 111345678999999999999999966 5666653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-32 Score=300.05 Aligned_cols=252 Identities=22% Similarity=0.286 Sum_probs=195.7
Q ss_pred CCCCCceeeccCcceEEEEEe----CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 707 GFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
+|+..+.||+|+||.||+|+. .+|+.||+|++.... ....+.+..|+++++++ +|+||+++++++..+.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-- 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT-- 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC--
Confidence 477889999999999999975 368999999987532 22346678899999999 5999999999887665
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..++||||+++++|.+++.... .+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++
T Consensus 79 --~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 152 (290)
T cd05613 79 --KLHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 152 (290)
T ss_pred --eEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccc
Confidence 5679999999999999997654 4788889999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCC--CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEG--RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
........ .......|+..|+|||..... .++.++|||||||++|||++|+.||..... ......+...
T Consensus 153 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~------- 223 (290)
T cd05613 153 KEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRR------- 223 (290)
T ss_pred eecccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHH-------
Confidence 86543321 112234588899999987653 468899999999999999999999864211 1111111111
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
+...... .+..+...+.+++.+||+.+|++|| ++.+++.|
T Consensus 224 -~~~~~~~--------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 224 -ILKSEPP--------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -hhccCCC--------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0000000 0122446788999999999999997 77888876
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-33 Score=299.94 Aligned_cols=247 Identities=21% Similarity=0.335 Sum_probs=202.9
Q ss_pred CceeeccCcceEEEEE-eCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 711 NNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
.+.||.|.||+||-|+ .++|+.||||++.+.. .....++++|+.|++.+.||.||.+...|+..+ ..++|||.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e----rvFVVMEK 644 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPE----RVFVVMEK 644 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc----eEEEEehh
Confidence 3789999999999997 5589999999998653 345688999999999999999999999998777 56799999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC---CcEEEecccccccccCCC
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN---MVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DfGla~~~~~~~ 864 (1002)
+.|.-|+-.+...++++++.....+..||+.||.||| -++|+|+|+||+|||+... ..+||||||+|+.+++..
T Consensus 645 l~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 645 LHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred hcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 9776666667777778999989999999999999999 8999999999999999643 579999999999887643
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
- ....+||+.|+|||+++...|...-|+||.||++|.-++|..||.+..+ +.+ +|.+.....
T Consensus 722 F---RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd----Ind-----------QIQNAaFMy 783 (888)
T KOG4236|consen 722 F---RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED----IND-----------QIQNAAFMY 783 (888)
T ss_pred h---hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc----hhH-----------Hhhcccccc
Confidence 2 2457899999999999999999999999999999999999999976321 111 122222111
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+. ..+.++.....++|...+++.-++|.+....+.|.+
T Consensus 784 Pp----~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 784 PP----NPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred CC----CchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence 11 123566778889999999999999999998887754
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-32 Score=305.25 Aligned_cols=271 Identities=20% Similarity=0.217 Sum_probs=196.7
Q ss_pred cCCCC-CceeeccCcceEEEEEeC-CCcEEEEEEeecccchh--------------HHHHHHHHHHHHhccCCCcceeee
Q 037042 706 DGFSE-NNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRA--------------FKSFDVECEVMKSIRHRNIIKIIS 769 (1002)
Q Consensus 706 ~~~~~-~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~~ 769 (1002)
++|.. .+.||+|+||+||+|... +++.||||++....... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45653 477999999999999854 68999999986432211 124678999999999999999999
Q ss_pred EEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcE
Q 037042 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVA 849 (1002)
Q Consensus 770 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~ 849 (1002)
++..++ +.++||||++ |+|.+++.... .+++.....++.|++.|++||| +.+|+||||||+||+++.++.+
T Consensus 88 ~~~~~~----~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~ 158 (335)
T PTZ00024 88 VYVEGD----FINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGIC 158 (335)
T ss_pred EEecCC----cEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCE
Confidence 988776 6789999997 59999886543 4889999999999999999999 8999999999999999999999
Q ss_pred EEecccccccccCCCc------------eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccc
Q 037042 850 HLSDFGITKLLTREDQ------------FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIF 916 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~ 916 (1002)
||+|||++........ ........++..|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999976651110 0111233467889999987664 46899999999999999999999997643
Q ss_pred cccccHHHHHHHHHhhh---hhhcc-----cCccCC-hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 917 NEGMTLKHWVNDWLLIS---IMKIV-----DGSLLS-REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~---~~~i~-----~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
..+ .+........... ..... ...... ..... .....+...+.+++.+|++.+|++||+++|++.|-+-
T Consensus 239 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~ 316 (335)
T PTZ00024 239 EID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF 316 (335)
T ss_pred HHH-HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence 221 1111111000000 00000 000000 00000 0111235678899999999999999999999987653
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-32 Score=296.19 Aligned_cols=262 Identities=20% Similarity=0.255 Sum_probs=195.3
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-hhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
|++.+.||+|+||+||+|+.. +++.||+|++..... .......+|+..+++++ ||||+++++++...+ ..++|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~----~~~lv 76 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREND----ELYFV 76 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC----cEEEE
Confidence 567789999999999999875 588999999865432 22334556899999998 999999999987765 66899
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+ +|+|.+++.... ..+++..+..++.|+++|+.||| +++++|+||+|+||++++++.++|+|||+++.....
T Consensus 77 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 77 FEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred EecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 9999 789999887654 46899999999999999999999 899999999999999999999999999999866543
Q ss_pred CceeeeccCCCCcccccccccC-CCCcCcccchHHHHHHHHHHHhCCCCCccccccccc-----------HHHHHHHHHh
Q 037042 864 DQFVTQTQTPATIGYMALEYGS-EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT-----------LKHWVNDWLL 931 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~-----------~~~~~~~~~~ 931 (1002)
.. .....++..|+|||+.. ...++.++|+||||++++||++|+.||......+.. ...|......
T Consensus 153 ~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 153 PP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred CC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 22 12345788899999764 445799999999999999999999998654221110 0011111000
Q ss_pred hhhhhcccCccCCh--hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 932 ISIMKIVDGSLLSR--EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. ...+...... ....... +.....+.+++.+||+.+|++|||++|++.+
T Consensus 230 ~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 230 A---SKLGFRFPQFAPTSLHQLI-PNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred h---ccccccccccccccHHHHc-ccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0 0000000000 0001111 1124678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-32 Score=307.84 Aligned_cols=269 Identities=22% Similarity=0.254 Sum_probs=197.7
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KA 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~ 778 (1002)
..++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++...+. ..
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567999999999999999999865 68899999986532 2334667789999999999999999987755432 11
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++|+||+ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence 1357999998 66999988763 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH----------
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN---------- 927 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~---------- 927 (1002)
..... .....++..|+|||...+ ..++.++||||+||++|||++|+.||....... .+.....
T Consensus 167 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 167 HTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNLVGTPDEELL 240 (343)
T ss_pred ccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHHHH
Confidence 65432 133457888999998754 467899999999999999999999996532210 0111100
Q ss_pred -HHHhhhhhhcccCccCCh-hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 928 -DWLLISIMKIVDGSLLSR-EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 928 -~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.+................ ..... .....+..+.+++.+|++.+|++|||+.|+++|-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~ 299 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKE-VFSGANPLAIDLLEKMLVLDPDKRITAAEALAHP 299 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHH-HhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCC
Confidence 000000000000000000 00000 0112356789999999999999999999999873
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-32 Score=303.53 Aligned_cols=274 Identities=20% Similarity=0.203 Sum_probs=197.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchh----
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK---- 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 777 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++......
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999855 689999998864322 2234667899999999999999999887554311
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
....++|+||+.+ ++.+.+......+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 1234789999965 787777665556999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCcee---------eeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 858 KLLTREDQFV---------TQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 858 ~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
+......... ..+...++..|+|||+..+. .++.++|||||||++|||++|++||....... .......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~~~~~~ 241 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QLHLIFK 241 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 7654322111 11233567889999986654 58999999999999999999999986532211 1111111
Q ss_pred HHHhh---------hhhhcccCccC--ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 928 DWLLI---------SIMKIVDGSLL--SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 928 ~~~~~---------~~~~i~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..... ......+.... ....... ........+.+++.+|++.+|++|||+.|++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE-RFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHH-HcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00000 00000000000 0000000 011223568899999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-33 Score=292.06 Aligned_cols=260 Identities=27% Similarity=0.400 Sum_probs=202.4
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEee--ccc-----chhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN--QQC-----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~--~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
.++|-...+||+|+|++||+|. +.+.+.||||+-. +.. +...+..-+|.+|.+.++||-||++|+|+.-...
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 3567778899999999999996 5678999999853 221 1234566789999999999999999999976442
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEec
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSD 853 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~D 853 (1002)
.+|-|+|||+|-+|+-|++..+. +++.+++.|..||+.||.||... +.+|||-|+||.|||+. .-|.+||+|
T Consensus 542 ---sFCTVLEYceGNDLDFYLKQhkl-mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 542 ---SFCTVLEYCEGNDLDFYLKQHKL-MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred ---cceeeeeecCCCchhHHHHhhhh-hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 46889999999999999987764 88999999999999999999854 78999999999999994 568999999
Q ss_pred ccccccccCCCce-----eeeccCCCCcccccccccCCC----CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHH
Q 037042 854 FGITKLLTREDQF-----VTQTQTPATIGYMALEYGSEG----RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 854 fGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~ 924 (1002)
||+++.++.+.+. .......||.+|++||.+.-+ +.+.|+||||+|||+|.++.|+.||........
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd---- 692 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD---- 692 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH----
Confidence 9999999765432 123556899999999975433 478999999999999999999999976432211
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+.... -| .......+...+....+..++|++|+++--++|....++..+
T Consensus 693 ILqeN------TI-----lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 693 ILQEN------TI-----LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred HHhhh------ch-----hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 11100 01 111112222334456778899999999999999998888754
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-32 Score=298.55 Aligned_cols=250 Identities=26% Similarity=0.372 Sum_probs=200.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc---cchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|...+.||+|+||.||+|+.. +|+.||+|++.+. .....+.+..|++++++++ ||||+++++++...+ .
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~----~ 76 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE----N 76 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc----e
Confidence 36888899999999999999865 7999999998753 2233467888999999998 999999999887665 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++.+.+ .+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++++|||++...
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~ 152 (280)
T cd05581 77 LYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVL 152 (280)
T ss_pred EEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence 679999999999999997764 5899999999999999999999 899999999999999999999999999998765
Q ss_pred cCCCce------------------eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccH
Q 037042 861 TREDQF------------------VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922 (1002)
Q Consensus 861 ~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~ 922 (1002)
...... .......++..|+|||+.....++.++||||+|++++++++|+.||......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---- 228 (280)
T cd05581 153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY---- 228 (280)
T ss_pred CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH----
Confidence 443210 1122345788999999988888999999999999999999999999764310
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH----HHHHHH
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA----KEIVTR 984 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~----~evl~~ 984 (1002)
.. ...+...... .+...+..+.+++.+||+.+|++||++ +++++|
T Consensus 229 ~~---------~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 229 LT---------FQKILKLEYS--------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HH---------HHHHHhcCCC--------CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 00 0011111000 011224568899999999999999999 888765
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-33 Score=285.68 Aligned_cols=242 Identities=21% Similarity=0.256 Sum_probs=192.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch---hHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR---AFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1002)
..+|....+||+|+||.|..|..+ +.+.+|||+++++.-. ..+-...|-+++.-- +-|.++++..++..-+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD---- 423 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD---- 423 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh----
Confidence 346889999999999999999755 5678999999876422 223334566676655 5689999999988776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..+.||||+.||+|.-.+++-+. +.+..+..+|..||-||-+|| +++|+.||+|.+||++|.+|.+||+|||+++.
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred heeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccc
Confidence 67899999999999988887664 777788899999999999999 99999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
---++. +....+||+.|+|||++.+.+|+..+|.|||||++|||+.|++||+...+++. ...|.+
T Consensus 500 ni~~~~--TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el-------------F~aI~e 564 (683)
T KOG0696|consen 500 NIFDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-------------FQAIME 564 (683)
T ss_pred cccCCc--ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH-------------HHHHHH
Confidence 433222 33567899999999999999999999999999999999999999987543321 112222
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN 977 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 977 (1002)
.... .|...+.+..++....+...|.+|..
T Consensus 565 hnvs--------yPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 565 HNVS--------YPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ccCc--------CcccccHHHHHHHHHHhhcCCccccC
Confidence 2222 22334566777888888999999963
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-32 Score=296.45 Aligned_cols=254 Identities=21% Similarity=0.262 Sum_probs=194.6
Q ss_pred CCCCCceeeccCcceEEEEEe----CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 707 GFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
+|++.+.||+|+||.||+|+. .+++.||||++++.. ....+.+..|+++++++ +||||+++++++..+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~-- 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT-- 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC--
Confidence 377789999999999999974 357889999987532 22345678899999999 5999999999887665
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..++||||+++|+|.+++.... .+++..+..++.|+++||+||| ..+++||||||+||+++.++.++|+|||++
T Consensus 79 --~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~ 152 (288)
T cd05583 79 --KLHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLS 152 (288)
T ss_pred --EEEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccc
Confidence 5679999999999999987654 4788899999999999999999 899999999999999999999999999998
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCC--cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGR--VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
+........ ......|+..|+|||...+.. ++.++||||||+++|||++|..||...... .....+...
T Consensus 153 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~------- 223 (288)
T cd05583 153 KEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEISRR------- 223 (288)
T ss_pred ccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHHHH-------
Confidence 765443221 112345788999999876654 788999999999999999999998642111 111111111
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+...... .+......+.+++.+||+.+|++|||+.++.+.|.
T Consensus 224 -~~~~~~~--------~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 224 -ILKSKPP--------FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred -HHccCCC--------CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 1110000 11123456889999999999999999766654443
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=293.56 Aligned_cols=265 Identities=26% Similarity=0.288 Sum_probs=198.8
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|++++++++|+||+++++++...+ ..++|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~~v 76 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTER----KLYLV 76 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC----ceEEE
Confidence 556788999999999999865 59999999987653 334567788999999999999999999987765 67899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
+||++ ++|.+++......+++..+..++.|+++|++||| +.+|+||||+|+||++++++.+||+|||++.......
T Consensus 77 ~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 77 FEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred ecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 99998 5999999876456899999999999999999999 8999999999999999999999999999998765432
Q ss_pred ceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH---hh---hhhhc
Q 037042 865 QFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL---LI---SIMKI 937 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~---~~---~~~~i 937 (1002)
. ......++..|+|||...+. .++.++|||||||++|||++|+.||........ +........ .. .+..+
T Consensus 153 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07829 153 R--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ-LFKIFQILGTPTEESWPGVTKL 229 (282)
T ss_pred c--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCCCcHHHHHhhccc
Confidence 2 12233457789999987766 789999999999999999999999865322110 111000000 00 00000
Q ss_pred --ccCccCCh--hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 938 --VDGSLLSR--EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 938 --~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.+...... ...... .+.....+.+++.+||..+|++||++.+++.|
T Consensus 230 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 230 PDYKPTFPKFPPKDLEKV-LPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccccccCccchHHh-cccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000 000000 11225679999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-33 Score=293.17 Aligned_cols=257 Identities=20% Similarity=0.277 Sum_probs=210.6
Q ss_pred cCCCCCceeeccCcceEEEEEeCCC-cEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDG-MEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++++...||-|+||.|=.++.+.. ..+|+|++++. ...+.+.+..|-++|..++.|.||++|..|.+.. +.
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k----yv 495 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK----YV 495 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch----hh
Confidence 4566677899999999999986643 34899988764 3556678889999999999999999999998777 88
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|+.||-|-||.+...++..+. ++....+.++..+.+|++||| .++||+||+||+|.+++.+|-+||.|||+|+.+.
T Consensus 496 YmLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred hhhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 999999999999999987665 888888999999999999999 9999999999999999999999999999999998
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.+.++ ..++||+.|.|||++.....+.++|.||+|+.+|||++|.+||....+-. .+.. +.+-+|
T Consensus 572 ~g~KT---wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk----tYn~------ILkGid-- 636 (732)
T KOG0614|consen 572 SGRKT---WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK----TYNL------ILKGID-- 636 (732)
T ss_pred cCCce---eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH----HHHH------HHhhhh--
Confidence 77654 34689999999999999999999999999999999999999998753321 1100 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHHHhhcccCC
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRLLKINDLDF 993 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L~~i~~~~~ 993 (1002)
....|..+.....++|++.+..+|.+|.. +.|+-+|-| +.+.++
T Consensus 637 -------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W-f~gfdw 685 (732)
T KOG0614|consen 637 -------KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW-FEGFDW 685 (732)
T ss_pred -------hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh-hhcCCh
Confidence 01122345566789999999999999985 788888876 444443
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-32 Score=326.53 Aligned_cols=146 Identities=27% Similarity=0.405 Sum_probs=129.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|.+.++||+|+||+||+|+.. +++.||||+++... ......+..|+.+++.++||||+++++++...+ .
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----~ 78 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN----N 78 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC----E
Confidence 357889999999999999999865 68999999987542 233467888999999999999999999887766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++||||+++++|.+++...+ .+++..++.|+.||+.||+||| .++|+||||||+|||++.++.+||+|||+++
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 689999999999999997654 4788889999999999999999 8899999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=288.55 Aligned_cols=248 Identities=21% Similarity=0.281 Sum_probs=192.2
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc-----cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ-----CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
+|.+.+.||+|+||.||+|+.. .+..+++|+++.. .......+..|+.++++++||||+++++++...+ .
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 76 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD----A 76 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC----c
Confidence 4788899999999999999754 3455666665432 1223345677999999999999999999887665 5
Q ss_pred HHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 781 KALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
.++|+||+++++|.+++.. ....+++..++.++.|+++|++||| +.+++|+||||+||++++ +.+||+|||++
T Consensus 77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~ 152 (260)
T cd08222 77 FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVS 152 (260)
T ss_pred eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCce
Confidence 6799999999999998864 2336899999999999999999999 899999999999999975 57999999998
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
........ ......|+..|+|||...+..++.++|+||||+++|+|++|..||.... ...... .+
T Consensus 153 ~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~--------~~ 217 (260)
T cd08222 153 RLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVL--------RI 217 (260)
T ss_pred eecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHH--------HH
Confidence 77644322 1123457888999999888888999999999999999999999986421 111111 11
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..+.... .+..++..+.+++.+||..+|++||++.|+++|
T Consensus 218 ~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 218 VEGPTPS-------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HcCCCCC-------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1111110 112345678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-32 Score=283.05 Aligned_cols=265 Identities=21% Similarity=0.250 Sum_probs=200.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-C-CC----cceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-H-RN----IIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~n----iv~~~~~~~~~~~~ 777 (1002)
+.+|.+...+|+|.||.|.+.... .+..||||+++.. ....++...|+++++++. + |+ +|++.++|...+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg-- 164 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG-- 164 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC--
Confidence 678999999999999999998744 4789999998754 455677788999999993 3 22 677777787666
Q ss_pred hHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-----------
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD----------- 845 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~----------- 845 (1002)
+.|+|+|.+ |-++.+++...+. +++..+++.|++|++++++||| +.+++|-|+||+|||+.+
T Consensus 165 --hiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 165 --HICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred --ceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCC
Confidence 778999988 5599999988665 7899999999999999999999 999999999999999832
Q ss_pred ---------CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc
Q 037042 846 ---------NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF 916 (1002)
Q Consensus 846 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~ 916 (1002)
+..+||+|||.|+...+.. +..+.|..|.|||++.+-+++.++||||+||||+|+.||...|..-.
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe 313 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE 313 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC
Confidence 3458999999998765544 34567888999999999999999999999999999999999886532
Q ss_pred cccccHHHHHHHHHhh---h-hhhc-----ccC-ccC-----------------ChhhhHHHhHHHHHHHHHHHHhHccc
Q 037042 917 NEGMTLKHWVNDWLLI---S-IMKI-----VDG-SLL-----------------SREDIQFVAKEQCMSFVFNMAMECTV 969 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~---~-~~~i-----~~~-~~~-----------------~~~~~~~~~~~~~~~~l~~li~~cl~ 969 (1002)
+. ..+ ..++....+ . +.+. +.. .+. .+..........+...+++|+++|+.
T Consensus 314 n~-EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~ 391 (415)
T KOG0671|consen 314 NL-EHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLE 391 (415)
T ss_pred cH-HHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHc
Confidence 11 111 111110000 0 0000 000 000 00111111233456679999999999
Q ss_pred cCCCCCCCHHHHHHHH
Q 037042 970 ESPEKRINAKEIVTRL 985 (1002)
Q Consensus 970 ~~P~~Rpt~~evl~~L 985 (1002)
+||.+|+|+.|++.|-
T Consensus 392 fDP~~RiTl~EAL~Hp 407 (415)
T KOG0671|consen 392 FDPARRITLREALSHP 407 (415)
T ss_pred cCccccccHHHHhcCH
Confidence 9999999999999874
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-32 Score=297.79 Aligned_cols=243 Identities=23% Similarity=0.279 Sum_probs=196.1
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++.|.....+|.|+|++|-.+. ..+++..|||++.+.. .+...|+.++... +||||+++.+.+.++- +.+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~----~~~ 392 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGK----EIY 392 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCc----eee
Confidence 3567777789999999999986 4568899999997652 3345577776666 6999999999998776 778
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee-CCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl-~~~~~~kl~DfGla~~~~ 861 (1002)
+|||++.||-+.+.+...+. .. ..+..|+.+|+.|+.||| .++|||||+||+|||+ +..++++|+|||.++...
T Consensus 393 ~v~e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred eeehhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 99999999999888876553 22 667789999999999999 8999999999999999 699999999999998766
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.. ....+-|..|.|||+....+|++++|+|||||+||+|++|+.||.....+ ..+. ..+..+.
T Consensus 468 ~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~-----------~~i~~~~ 530 (612)
T KOG0603|consen 468 RS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIH-----------TRIQMPK 530 (612)
T ss_pred hh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHH-----------HhhcCCc
Confidence 54 12345678899999999999999999999999999999999999764332 1110 1111110
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
..+..++...+++.+||++||.+||+|.++..|-+.
T Consensus 531 ----------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 531 ----------FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ----------cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 013456788999999999999999999999998775
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=284.15 Aligned_cols=240 Identities=28% Similarity=0.333 Sum_probs=192.7
Q ss_pred eeccCcceEEEEEeC-CCcEEEEEEeecccc---hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 714 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
||+|+||.||++... +++.||+|++.+... .....+..|++++++++||||+++++.+..+. ..++||||++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~~~ 76 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE----KLYLVLEYAP 76 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC----eeEEEEecCC
Confidence 689999999999865 589999999876432 24567888999999999999999999887666 6789999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeee
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 869 (1002)
+++|.+++.... .+++.....++.|+++|+.|+| +.+++|+||||+||+++.++.++|+|||++........ ..
T Consensus 77 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~ 150 (250)
T cd05123 77 GGELFSHLSKEG-RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RT 150 (250)
T ss_pred CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cc
Confidence 999999997765 4899999999999999999999 89999999999999999999999999999987654321 12
Q ss_pred ccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhH
Q 037042 870 TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949 (1002)
Q Consensus 870 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 949 (1002)
....++..|+|||...+..++.++|+||||+++||+++|+.||..... ..... .+......
T Consensus 151 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~--------~~~~~~~~------ 211 (250)
T cd05123 151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYE--------KILKDPLR------ 211 (250)
T ss_pred cCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHH--------HHhcCCCC------
Confidence 345678889999998888889999999999999999999999965322 11111 11111110
Q ss_pred HHhHHHHHHHHHHHHhHccccCCCCCCCH---HHHHHH
Q 037042 950 FVAKEQCMSFVFNMAMECTVESPEKRINA---KEIVTR 984 (1002)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~---~evl~~ 984 (1002)
.+...+..+.+++.+||..+|++||++ .++.+|
T Consensus 212 --~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 212 --FPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred --CCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 111124668899999999999999999 555543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=302.00 Aligned_cols=257 Identities=22% Similarity=0.298 Sum_probs=208.9
Q ss_pred hhcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCc-hhhHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGD-FKALF 780 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~~~~~ 780 (1002)
.++.|++...||+|.||.||+++ .++|+.+|||+.....+ ..++++.|.++++.. .|||++.+||++.-.+ .....
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq 95 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ 95 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence 35678999999999999999998 56799999999876643 346788899999987 6999999999886533 23346
Q ss_pred HHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.|+|||||.+|+..|+++.-. ..+.|..+..|...++.|+.||| ...++|||||-.|||++.++.||++|||.+..
T Consensus 96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeee
Confidence 789999999999999997643 37899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCC-----CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEG-----RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
++..- .......||+.|||||++... .|+..+|+||+|++..||.-|.+|+.++++... +
T Consensus 173 ldsT~--grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra-------------L 237 (953)
T KOG0587|consen 173 LDSTV--GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA-------------L 237 (953)
T ss_pred eeccc--ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-------------h
Confidence 66432 123456899999999987653 378889999999999999999999988765422 2
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.+|.. ........++.-..+|.++|..|+..|-++||++.++++|
T Consensus 238 F~IpR-----NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 238 FLIPR-----NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ccCCC-----CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 22211 1111222234446789999999999999999999999876
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-32 Score=256.79 Aligned_cols=209 Identities=25% Similarity=0.302 Sum_probs=166.5
Q ss_pred cCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+.......||+|+||.|-+.+ ..+|...|||+++... .+..+...+|+++..+. .+|.+|.+||.+.... ..+
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg----dvw 121 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG----DVW 121 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc----cEE
Confidence 344555779999999998887 4579999999997553 34456778888876554 7999999999665444 568
Q ss_pred HhhccCCCCChhHhhh---ccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLY---SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
++||.|+- +|..+-. ..+...++...-+||..|.+||.|||. +..|+|||+||+|||++.+|+||+||||++..
T Consensus 122 IcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 122 ICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred EeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEccccccee
Confidence 99999965 8876543 244578899999999999999999996 67899999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCC----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHH
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~ 924 (1002)
+.+.-. .+...|-..|||||.+.. ..|+.++||||+|+++.||.+++.||+....+-..+.+
T Consensus 199 L~dSiA---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq 264 (282)
T KOG0984|consen 199 LVDSIA---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ 264 (282)
T ss_pred ehhhhH---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence 654321 133457778999997543 47999999999999999999999999886655444433
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=255.75 Aligned_cols=265 Identities=18% Similarity=0.249 Sum_probs=202.7
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+++|+|-|++||.|. ..+.+.++||++++. ..+.+.+|+.+++.+. ||||+++++...+.... ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sk--tpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESK--TPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCcccc--Cch
Confidence 4679999999999999999997 567889999999854 3477899999999996 99999999998876654 446
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~ 861 (1002)
+|+||+.+.+....-. .++...++.++.++++||.|+| +.||+|||+||.|++||. ....+|+|+|+|.++.
T Consensus 112 LiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 9999999977766543 3677888999999999999999 999999999999999984 5679999999999887
Q ss_pred CCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc---
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI--- 937 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i--- 937 (1002)
+.... ...+.+..|.-||.+.. ..|+..-|+|||||++..|+..+.||........++...+.-.....+...
T Consensus 185 p~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 185 PGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred CCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 76543 23345667889997654 568999999999999999999999987765555555554432222111111
Q ss_pred ----ccCcc----------CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 938 ----VDGSL----------LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 938 ----~~~~~----------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.|+.. ....+.......-..++..+++.+.+..|.++|+|++|++.|
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 11111 001111111111234678899999999999999999999987
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=289.63 Aligned_cols=207 Identities=19% Similarity=0.279 Sum_probs=175.9
Q ss_pred cCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.-|..++.||-|+||+|.+++ .++...||+|.+++.+ ......++.|.+||...+.+-||++|-.|.+.+ ..
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd----nL 704 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD----NL 704 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC----ce
Confidence 347888999999999999997 4556779999998764 334567889999999999999999999998887 77
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|+||||++||++..++.+.+- +++.-++.+...++.|+++.| +.|+|||||||+|||||.+|.+||+|||+++-+.
T Consensus 705 YFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred EEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccce
Confidence 899999999999999987764 777778888889999999999 9999999999999999999999999999996443
Q ss_pred CCCce----------------------------------------eeeccCCCCcccccccccCCCCcCcccchHHHHHH
Q 037042 862 REDQF----------------------------------------VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVM 901 (1002)
Q Consensus 862 ~~~~~----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~ 901 (1002)
..... ......+||..|+|||++....|+..+|.||.|||
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 21100 01122459999999999999999999999999999
Q ss_pred HHHHHhCCCCCcccccccc
Q 037042 902 LMETFTGKKPTNEIFNEGM 920 (1002)
Q Consensus 902 l~elltg~~P~~~~~~~~~ 920 (1002)
||||+.|+.||....+.+.
T Consensus 861 l~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTPGET 879 (1034)
T ss_pred HHHHhhCCCCccCCCCCcc
Confidence 9999999999988665543
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=280.92 Aligned_cols=219 Identities=17% Similarity=0.106 Sum_probs=174.3
Q ss_pred cCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCCCCChhH
Q 037042 717 GGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEK 795 (1002)
Q Consensus 717 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~ 795 (1002)
|.||.||+++. .+++.||+|++.+.. ....|...+....||||+++++++...+ ..++||||+++|+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSED----SVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCC----eEEEEEecCCCCCHHH
Confidence 89999999985 478999999987643 2334555555667999999999987765 5689999999999999
Q ss_pred hhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCC
Q 037042 796 YLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875 (1002)
Q Consensus 796 ~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt 875 (1002)
++.+.. .+++..+..++.|+++|++|+| +++|+||||||+||+++.++.++++|||.+....... ....++
T Consensus 75 ~l~~~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~ 145 (237)
T cd05576 75 HISKFL-NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVE 145 (237)
T ss_pred HHHHhc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCcC
Confidence 987654 4889999999999999999999 8999999999999999999999999999886654321 233456
Q ss_pred cccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHH
Q 037042 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQ 955 (1002)
Q Consensus 876 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 955 (1002)
..|+|||......++.++||||+||++|||++|+.|+....... ..... . ..+..
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------------~~~~~--~--------~~~~~ 200 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---------------NTHTT--L--------NIPEW 200 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------------ccccc--c--------CCccc
Confidence 77999999888889999999999999999999998865321100 00000 0 01112
Q ss_pred HHHHHHHHHhHccccCCCCCCCH
Q 037042 956 CMSFVFNMAMECTVESPEKRINA 978 (1002)
Q Consensus 956 ~~~~l~~li~~cl~~~P~~Rpt~ 978 (1002)
.+..+.+++.+|++.||++||++
T Consensus 201 ~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 201 VSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCHHHHHHHHHHccCCHHHhcCC
Confidence 34568899999999999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=305.43 Aligned_cols=265 Identities=18% Similarity=0.181 Sum_probs=169.2
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-C----CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEec-C-ch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-D----GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI-G-DF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~-~~ 776 (1002)
..++|+..+.||+|+||.||+|+.. + +..||||++...... +....| .++...+.+++.++..+.. . ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4578999999999999999999864 4 689999987643211 111111 1111122222222211110 0 01
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCc-------------------CCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCC
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYI-------------------LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLK 837 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlk 837 (1002)
.....++|+||+++++|.+++...... .....+..++.||+.||+||| +++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 112567999999999999998754321 112345679999999999999 8999999999
Q ss_pred CCCeeeCC-CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCC----------------------CcCcccc
Q 037042 838 PSNVLLGD-NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG----------------------RVSTNGD 894 (1002)
Q Consensus 838 p~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~D 894 (1002)
|+|||++. ++.+||+|||+|+.+...... ......+|+.|||||..... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 689999999999866443221 22345688999999954322 2345679
Q ss_pred hHHHHHHHHHHHhCCCCCcccccc--------cccHHHHHHHHHhhhhhhcccCccCChhhhH-HHhHHHHHHHHHHHHh
Q 037042 895 VYNFGVMLMETFTGKKPTNEIFNE--------GMTLKHWVNDWLLISIMKIVDGSLLSREDIQ-FVAKEQCMSFVFNMAM 965 (1002)
Q Consensus 895 vwSlGv~l~elltg~~P~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~l~~li~ 965 (1002)
|||+||++|||+++..|++..... +.....|.. ..... ......+ ............+++.
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~d~~~~~~~dLi~ 431 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRK---------LVEPR-ASPDLRRGFEVLDLDGGAGWELLK 431 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHH---------hhccc-cchhhhhhhhhccccchHHHHHHH
Confidence 999999999999987775432100 011111111 11111 0000000 0000111234568999
Q ss_pred HccccCCCCCCCHHHHHHHHH
Q 037042 966 ECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 966 ~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+|++.||++|||+.|+++|=+
T Consensus 432 ~mL~~dP~kR~ta~e~L~Hpf 452 (566)
T PLN03225 432 SMMRFKGRQRISAKAALAHPY 452 (566)
T ss_pred HHccCCcccCCCHHHHhCCcC
Confidence 999999999999999999844
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=260.77 Aligned_cols=271 Identities=20% Similarity=0.271 Sum_probs=199.0
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-HHHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA-LFKAL 783 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~~~l 783 (1002)
.+..+.||.|+||+||.++.. +|+.||+|.+...- -...+.+.+|+.++...+|.|+...++...-..... ...|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344578999999999999854 79999999886432 234577889999999999999999888765444322 24578
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
++|.|.. +|...+-..+ .++...+.-+.+||++||+||| +.+|.||||||.|.|++.+...||||||+|+..+.+
T Consensus 135 ~TELmQS-DLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHh-hhhheeccCC-CCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 9999955 8888886655 4888888999999999999999 999999999999999999999999999999876654
Q ss_pred CceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH------------
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL------------ 930 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~------------ 930 (1002)
+. ..++..+.|..|.|||++.+. .|+.++||||.||++.|++..+..|....+-. .+ +.+.+..
T Consensus 210 ~~-~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Piq-QL-~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 210 DR-LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIE-QL-QMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred hh-hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHH-HH-HHHHHHhCCCcHHHHHHHh
Confidence 43 345667789999999998875 58999999999999999999998886543211 11 1111111
Q ss_pred hhhhhhcccCccCChhhhH---HHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQ---FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+.-.-+..+....+.... ...+.....+...+.++++.+||++|.+..+++.|+.
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 1111111111111111100 0011122344567888999999999999999998864
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=263.62 Aligned_cols=247 Identities=20% Similarity=0.250 Sum_probs=197.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc---cchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1002)
..+|...++||+|+|+.|..++. ++.+.+|+|+++++ .....+-++.|-.++.+. +||.+|-+..+|..+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes---- 324 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES---- 324 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc----
Confidence 35788999999999999999985 46888999999865 234456677888888877 7999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..+.|.||++||+|.-.+++.+. ++++.++.+...|.-||.||| ++|||.||+|.+|||+|..|.+|++|+|+++.
T Consensus 325 rlffvieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred eEEEEEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhc
Confidence 56789999999999888877665 899999999999999999999 99999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccc--ccccHHHHHHHHHhhhhhhc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFN--EGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~--~~~~~~~~~~~~~~~~~~~i 937 (1002)
--.+.. +.+..+||+.|+|||++++..|++.+|.|++||+++||+.|+.||+-... +++...++.-....++
T Consensus 401 ~l~~gd--~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek---- 474 (593)
T KOG0695|consen 401 GLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK---- 474 (593)
T ss_pred CCCCCc--ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh----
Confidence 433322 33567999999999999999999999999999999999999999986432 3444333332222221
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI 976 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp 976 (1002)
.+. .|...+.....+++.-+++||.+|.
T Consensus 475 ---qir--------iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 475 ---QIR--------IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ---ccc--------ccceeehhhHHHHHHhhcCCcHHhc
Confidence 111 1112233455677888899999986
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-31 Score=300.04 Aligned_cols=245 Identities=25% Similarity=0.413 Sum_probs=188.7
Q ss_pred CCCCceeeccCcc-eEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhh
Q 037042 708 FSENNLIGRGGFG-SVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 708 ~~~~~~lG~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
|...+.+|.|+.| .||+|... |+.||||++-.+ ..+-..+||..++.- +|||||++|+.-.+.. +.||+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q----F~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQ----FLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCc----eEEEEe
Confidence 4445678999887 57889875 889999998643 345678899999988 6999999998765555 778999
Q ss_pred ccCCCCChhHhhhccCC---cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-----CCcEEEeccccc
Q 037042 786 EYMPHGSLEKYLYSSNY---ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-----NMVAHLSDFGIT 857 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~---~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DfGla 857 (1002)
|.|.. +|.|+++.... .......+.+..|+++|++||| +.+||||||||+||||+. ...++|+|||++
T Consensus 583 ELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred hHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccc
Confidence 99966 99999988411 1111345788999999999999 899999999999999975 357999999999
Q ss_pred ccccCCCc-eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhC-CCCCcccccccccHHHHHHHHHhhhhh
Q 037042 858 KLLTREDQ-FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTG-KKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 858 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
+.+..+.. .....+..||-+|+|||++....-+.++||||+||++|+.++| ..||.+....+.+
T Consensus 659 Kkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N-------------- 724 (903)
T KOG1027|consen 659 KKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN-------------- 724 (903)
T ss_pred cccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh--------------
Confidence 99876543 2234567899999999999998888999999999999999985 8999875333221
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
|..+...- ......+++ +..++|.+|++++|..||+|.+|+.|
T Consensus 725 -Il~~~~~L---~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 725 -ILTGNYTL---VHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred -hhcCccce---eeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 11111000 000011122 78899999999999999999999976
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-30 Score=291.78 Aligned_cols=271 Identities=19% Similarity=0.217 Sum_probs=182.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-----------------CCCcEEEEEEeecccchhHH--------------HHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-----------------QDGMEVAVKVFNQQCGRAFK--------------SFDVE 752 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~--------------~~~~E 752 (1002)
..++|++.++||+|+||+||+|.. ..++.||||++........+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 357899999999999999999963 23568999998644322222 23347
Q ss_pred HHHHHhccCCCc-----ceeeeEEecCc----hhhHHHHHhhccCCCCChhHhhhccC----------------------
Q 037042 753 CEVMKSIRHRNI-----IKIISCCSIGD----FKALFKALALEYMPHGSLEKYLYSSN---------------------- 801 (1002)
Q Consensus 753 ~~~l~~l~h~ni-----v~~~~~~~~~~----~~~~~~~lv~e~~~~g~L~~~l~~~~---------------------- 801 (1002)
+.++.+++|.++ ++++++|.... ......++||||+++|+|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 67777765421 11124579999999999999987431
Q ss_pred -CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCccccc
Q 037042 802 -YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA 880 (1002)
Q Consensus 802 -~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~a 880 (1002)
..+++..+..++.|+++|++|+| +.+|+||||||+||+++.++.+||+|||++..+...... ......+|+.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeC
Confidence 12356778899999999999999 889999999999999999999999999999765433221 1122234789999
Q ss_pred ccccCCCC--------------------c--CcccchHHHHHHHHHHHhCCC-CCcccccccccHHHHHHHHHhhhhhhc
Q 037042 881 LEYGSEGR--------------------V--STNGDVYNFGVMLMETFTGKK-PTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 881 PE~~~~~~--------------------~--~~~~DvwSlGv~l~elltg~~-P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
||.+.... | ..+.||||+||+++||++|.. |+.....-......+-.+. ...+.
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~---~~~r~ 455 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDL---NRWRM 455 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchH---HHHHh
Confidence 99765322 1 234799999999999999886 6643211111111000000 00000
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCC---CCCCCHHHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESP---EKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P---~~Rpt~~evl~~L~ 986 (1002)
...... .............+++.+|+..+| .+|+|++|+++|-+
T Consensus 456 ~~~~~~-----~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~ 502 (507)
T PLN03224 456 YKGQKY-----DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF 502 (507)
T ss_pred hcccCC-----CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence 000000 000112345678899999999765 78999999999854
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-29 Score=263.88 Aligned_cols=239 Identities=29% Similarity=0.331 Sum_probs=191.4
Q ss_pred CcceEEEEEeC-CCcEEEEEEeecccchh-HHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCCCCChhH
Q 037042 718 GFGSVYKARIQ-DGMEVAVKVFNQQCGRA-FKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEK 795 (1002)
Q Consensus 718 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~ 795 (1002)
+||.||+|... +|+.||+|++....... .+.+.+|++.+++++|+||+++++++.... ..++++||+++++|.+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~l~~e~~~~~~L~~ 76 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDED----KLYLVMEYCDGGDLFD 76 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC----EEEEEEeCCCCCCHHH
Confidence 58999999876 58999999997654433 688999999999999999999999987655 5679999999999999
Q ss_pred hhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCC
Q 037042 796 YLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875 (1002)
Q Consensus 796 ~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt 875 (1002)
++..... +++..+..++.++++++.||| +.+++|+||+|+||+++.++.++|+|||.+....... ......++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~ 149 (244)
T smart00220 77 LLKKRGR-LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGT 149 (244)
T ss_pred HHHhccC-CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCC
Confidence 9876554 788999999999999999999 8899999999999999999999999999998765432 22345678
Q ss_pred cccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHH
Q 037042 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQ 955 (1002)
Q Consensus 876 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 955 (1002)
..|+|||......++.++||||+|++++++++|..||...... ...... +.......... ...
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~----~~~~~~--------~~~~~~~~~~~-----~~~ 212 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL----LELFKK--------IGKPKPPFPPP-----EWK 212 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHH--------HhccCCCCccc-----ccc
Confidence 8899999988888899999999999999999999998653111 111111 00000000000 000
Q ss_pred HHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 956 CMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 956 ~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.+..+.+++.+|+..+|++||++.+++++
T Consensus 213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 213 ISPEAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred CCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence 34678899999999999999999999974
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=263.11 Aligned_cols=135 Identities=25% Similarity=0.343 Sum_probs=118.1
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-----C---CCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-----H---RNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~~~ 775 (1002)
..+|-+.++||-|.|++||++. ..+.+.||+|+.+.. +...+....||+++++++ | .+||++++.|...+
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 3578899999999999999997 457889999998754 455677788999999984 3 36999999999988
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL 843 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl 843 (1002)
.+..++|||+|+. |-+|..++....+ .++...+++|++||+.||.|||. ..+|||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeee
Confidence 8888999999998 6699999887655 68999999999999999999997 6799999999999998
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=244.97 Aligned_cols=267 Identities=21% Similarity=0.193 Sum_probs=197.6
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh--
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA-- 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-- 778 (1002)
...+|...+.+|.|+- .|..|-.. .++.||+|..... .....+...+|...+..+.|+||++++.++.-.....
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 3457888889999988 56556432 5889999987543 2334567788999999999999999999886544332
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...|+|||||+. +|...+.- .++-.....|..|++.|+.||| +.+|+|||+||+||++..+..+||.|||+|+
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~~---elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVILM---ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHHH---hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhc
Confidence 346899999965 89888773 3677788899999999999999 9999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh-------
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL------- 931 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------- 931 (1002)
..... ..++..+.|..|.|||++.+..|.+.+||||.||++.||++|+.-|.+ ...+.+|.+....
T Consensus 167 ~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g----~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 167 TEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG----KDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred ccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC----chHHHHHHHHHHHhcCCCHH
Confidence 65433 244566788999999999998899999999999999999999998864 2233344321110
Q ss_pred --hhhh-------hcccCccCChh--------hh-HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 932 --ISIM-------KIVDGSLLSRE--------DI-QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 932 --~~~~-------~i~~~~~~~~~--------~~-~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.++. +.......... +. ....++-......+++.+|+..+|++|.+++++++|-
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 0000 00000000000 00 0001112345688999999999999999999999984
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-29 Score=278.32 Aligned_cols=254 Identities=25% Similarity=0.346 Sum_probs=202.7
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+++|.|.||.||||+. ..++..|||+++-......+.++.|+-+++..+|||||.+++.+...+ -.++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d----klwi 89 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD----KLWI 89 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc----CcEE
Confidence 35788899999999999999985 468999999999887778888999999999999999999999886655 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
+||||.+|+|++.-+..+ ++++.++..+.....+|++||| +++-+|||||-.||++++.|.+|++|||.+..+...
T Consensus 90 cMEycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred EEEecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhh
Confidence 999999999999876655 5888999999999999999999 999999999999999999999999999998765432
Q ss_pred CceeeeccCCCCccccccccc---CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 864 DQFVTQTQTPATIGYMALEYG---SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
......+.||+.|||||+. +.+.|..++|||+.|++..|+-.-++|..+.++...... . ...-.++
T Consensus 166 --i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L--------m-TkS~~qp 234 (829)
T KOG0576|consen 166 --IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL--------M-TKSGFQP 234 (829)
T ss_pred --hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH--------h-hccCCCC
Confidence 1223457899999999964 456799999999999999999998888655433211000 0 0001111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
-... .+..-...|.++++.|+..+|++||+++.+++|
T Consensus 235 p~lk-------Dk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 235 PTLK-------DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred Cccc-------CCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 0000 111124568899999999999999999877643
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-28 Score=261.20 Aligned_cols=198 Identities=20% Similarity=0.303 Sum_probs=168.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--------hhHHHHHHHHHHHHhcc---CCCcceeeeEEe
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--------RAFKSFDVECEVMKSIR---HRNIIKIISCCS 772 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~~~~~~~ 772 (1002)
..+|+..+.+|.|+||.|+.|..+ +...|+||.+.++.- +..-.+-.||.||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 346899999999999999999865 567899998876521 11123456999999997 999999999999
Q ss_pred cCchhhHHHHHhhccC-CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 773 IGDFKALFKALALEYM-PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 773 ~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
+.+ +.|++||-. ++-+|.+++..+.. +++..+..|+.||+.|+++|| +.+|||||||-+||.++.+|-+||
T Consensus 640 ddd----~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 640 DDD----YYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred cCC----eeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEE
Confidence 888 778999875 45689999987764 899999999999999999999 999999999999999999999999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcc
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
+|||.|.....+. ...++||..|.|||++.+.+| +..-|||++|+++|-++...-||+.
T Consensus 712 idfgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 712 IDFGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred eeccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9999987655432 134679999999999999888 6779999999999999998888764
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=239.99 Aligned_cols=211 Identities=35% Similarity=0.517 Sum_probs=181.6
Q ss_pred eeccCcceEEEEEeCC-CcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCCCC
Q 037042 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHG 791 (1002)
Q Consensus 714 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g 791 (1002)
||+|++|.||+++..+ ++.+++|++...... ..+.+.+|++.++.++|++|+++++++.... ..++++||++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~~~~e~~~~~ 76 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN----HLYLVMEYCEGG 76 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCC----eEEEEEecCCCC
Confidence 6899999999998764 899999998765432 3577899999999999999999999988754 567999999999
Q ss_pred ChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEecccccccccCCCceeeec
Q 037042 792 SLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDFGITKLLTREDQFVTQT 870 (1002)
Q Consensus 792 ~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~ 870 (1002)
+|.+++......+++..+..++.+++++++||| +.+++|+||+|.||+++. ++.++|+|||.+........ ...
T Consensus 77 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~ 151 (215)
T cd00180 77 SLKDLLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLK 151 (215)
T ss_pred cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhh
Confidence 999999876445889999999999999999999 889999999999999999 89999999999986654321 123
Q ss_pred cCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhH
Q 037042 871 QTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949 (1002)
Q Consensus 871 ~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 949 (1002)
...+...|++||..... .++.++|+|++|+++++|
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 34567789999998777 788999999999999998
Q ss_pred HHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..+.+++.+|+..+|++||++.++++++
T Consensus 188 --------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 --------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred --------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3477899999999999999999998764
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-28 Score=257.25 Aligned_cols=268 Identities=21% Similarity=0.267 Sum_probs=199.8
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc------CCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR------HRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~ 776 (1002)
.-.+|.+....|+|-|++|.+|... .|..||||+++.. +...+.=..|+++|+++. ..|+++++..|....
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn- 507 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN- 507 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc-
Confidence 3467888889999999999999854 5889999999865 334566678999999995 347888887776655
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEec
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSD 853 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~D 853 (1002)
+.|||+|-+.- +|.+.+...+. .+....+..+++|+.-||..|. ..+|+|.||||.|||+++ ...+||||
T Consensus 508 ---HLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCD 580 (752)
T KOG0670|consen 508 ---HLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCD 580 (752)
T ss_pred ---eeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeecc
Confidence 78999998844 99999987654 6888899999999999999999 899999999999999985 46789999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHH--------
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHW-------- 925 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~-------- 925 (1002)
||.|......+-+ .......|.|||++.+-.|+...|+||.||+|||+.||+..|.+..+..+ +..+
T Consensus 581 fGSA~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~M-Lrl~me~KGk~p 655 (752)
T KOG0670|consen 581 FGSASFASENEIT----PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQM-LRLFMELKGKFP 655 (752)
T ss_pred Ccccccccccccc----HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHH-HHHHHHhcCCCc
Confidence 9999877655432 22234569999999999999999999999999999999999987544322 1111
Q ss_pred ---------HHHHHhhh--hh-hcccC-----------ccCChhhhHH--H-------hHHHHHHHHHHHHhHccccCCC
Q 037042 926 ---------VNDWLLIS--IM-KIVDG-----------SLLSREDIQF--V-------AKEQCMSFVFNMAMECTVESPE 973 (1002)
Q Consensus 926 ---------~~~~~~~~--~~-~i~~~-----------~~~~~~~~~~--~-------~~~~~~~~l~~li~~cl~~~P~ 973 (1002)
....+... +. .-+|. ......+... . ........+.+|+.+|+..||+
T Consensus 656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~ 735 (752)
T KOG0670|consen 656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE 735 (752)
T ss_pred HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence 11111110 00 00000 0000000000 0 1123456789999999999999
Q ss_pred CCCCHHHHHHHH
Q 037042 974 KRINAKEIVTRL 985 (1002)
Q Consensus 974 ~Rpt~~evl~~L 985 (1002)
+|.|..++++|-
T Consensus 736 KRit~nqAL~Hp 747 (752)
T KOG0670|consen 736 KRITVNQALKHP 747 (752)
T ss_pred hcCCHHHHhcCC
Confidence 999999999874
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-27 Score=248.35 Aligned_cols=269 Identities=23% Similarity=0.311 Sum_probs=203.8
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
...+.|..+++||+|.|++||+|... ..+.||+|.+.... ....+..|++++..+ .+.||+++.+++..++
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd-- 108 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND-- 108 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC--
Confidence 34567899999999999999999733 46789999887543 346688999999999 5899999999998888
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEecccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLSDFGI 856 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGl 856 (1002)
.+++|+||+++....++... ++...+..+++.+..||+|+| ..|||||||||+|+|.+ ..+.-.|.|||+
T Consensus 109 --~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 109 --QVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred --eeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechh
Confidence 78899999999998888764 567888999999999999999 99999999999999997 457889999999
Q ss_pred cccccCCC----------------------------------cee--------eeccCCCCcccccccccC-CCCcCccc
Q 037042 857 TKLLTRED----------------------------------QFV--------TQTQTPATIGYMALEYGS-EGRVSTNG 893 (1002)
Q Consensus 857 a~~~~~~~----------------------------------~~~--------~~~~~~gt~~y~aPE~~~-~~~~~~~~ 893 (1002)
|....... ... ......||++|.|||++. .+..+.++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97221100 000 011234999999999754 45679999
Q ss_pred chHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc---ccCccCCh--------------hhh--------
Q 037042 894 DVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI---VDGSLLSR--------------EDI-------- 948 (1002)
Q Consensus 894 DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~--------------~~~-------- 948 (1002)
||||.||+++-+++++.||.....+-..+.+.+.......+.+. .+...... ...
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 99999999999999999998877776666666544433322221 11100000 000
Q ss_pred -----HHHhHHHH-HHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 949 -----QFVAKEQC-MSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 949 -----~~~~~~~~-~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
......++ +..+++++.+|+..+|.+|.|++|+++|
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 00011122 3378999999999999999999999987
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-28 Score=250.48 Aligned_cols=414 Identities=22% Similarity=0.258 Sum_probs=223.6
Q ss_pred CCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeecc-ccccccccchhhHHhhhchhhcc
Q 037042 128 FESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSF-NGLQGAYDHGFLQIFVKNIFVQF 206 (1002)
Q Consensus 128 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~~~~~~~~~ 206 (1002)
-.+++|..|+|+...|.+|+.+.+||+||||+|+|+.+-|+.|.+|.+|.+|-+.+ |+|+
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~------------------- 129 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT------------------- 129 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-------------------
Confidence 45677777777766666777777777777777777777777777777766666555 7776
Q ss_pred cCCcccCCCCc-cccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccc
Q 037042 207 SHNFSKCEIPN-EIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS 285 (1002)
Q Consensus 207 ~~n~~~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 285 (1002)
.+|+ .|++|..|+.|.+.-|++.-+..+.|..+++|..|.+-+|.+. .+....|..+.+++.+++..|.+-
T Consensus 130 -------~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~i 201 (498)
T KOG4237|consen 130 -------DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFI 201 (498)
T ss_pred -------hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccc
Confidence 3442 4566777777777777777666666777777777777777665 455555666666777777666632
Q ss_pred ccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcc
Q 037042 286 GSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGIL 365 (1002)
Q Consensus 286 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 365 (1002)
. ..+++.+.. ++ ...|..+++..-..-..+.++++..++..- | ...++.+..--.+.....++.
T Consensus 202 c-----dCnL~wla~-~~------a~~~ietsgarc~~p~rl~~~Ri~q~~a~k-f---~c~~esl~s~~~~~d~~d~~c 265 (498)
T KOG4237|consen 202 C-----DCNLPWLAD-DL------AMNPIETSGARCVSPYRLYYKRINQEDARK-F---LCSLESLPSRLSSEDFPDSIC 265 (498)
T ss_pred c-----ccccchhhh-HH------hhchhhcccceecchHHHHHHHhcccchhh-h---hhhHHhHHHhhccccCcCCcC
Confidence 1 122222211 11 112233444444444444455544443321 0 001111111111222233332
Q ss_pred cccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccC
Q 037042 366 SRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCR 445 (1002)
Q Consensus 366 ~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 445 (1002)
|...+..+ ++|+.|+|++|+|+++-+.+|.++.++++|+|..|+|...-...|.++..|++|+|.+|+|+..-|.+|..
T Consensus 266 P~~cf~~L-~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~ 344 (498)
T KOG4237|consen 266 PAKCFKKL-PNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQT 344 (498)
T ss_pred hHHHHhhc-ccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccc
Confidence 32222222 23444445555555555566666666666666666666555556666666666666666666666666666
Q ss_pred CccccEEEccCCcCCccC-CccccCCccCcccccccccccccCCccccccccCceeeccCCCCC---CCCcccc------
Q 037042 446 LAKVYQLDLSNNKLSGSI-PACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT---GPLPLEI------ 515 (1002)
Q Consensus 446 l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---~~~~~~~------ 515 (1002)
+..|.+|+|-.|.+.-.- -.+++. .|..+.-.+..| . ..-..++.+.++.+.+. ...|++.
T Consensus 345 ~~~l~~l~l~~Np~~CnC~l~wl~~-------Wlr~~~~~~~~~-C-q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~ 415 (498)
T KOG4237|consen 345 LFSLSTLNLLSNPFNCNCRLAWLGE-------WLRKKSVVGNPR-C-QSPGFVRQIPISDVAFGDFRCGGPEELGCLTSS 415 (498)
T ss_pred cceeeeeehccCcccCccchHHHHH-------HHhhCCCCCCCC-C-CCCchhccccchhccccccccCCccccCCCCCC
Confidence 666666666655542100 000000 011111111110 0 01112233333333221 0111111
Q ss_pred ---ccccccee-eeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC
Q 037042 516 ---GNLKVLVK-IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS 591 (1002)
Q Consensus 516 ---~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 591 (1002)
...+-+.+ ...|++.++ .+|..+. ..-.+|++.+|.++ .+|.. .+.+| .+||++|+++..--..|.+++
T Consensus 416 ~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~t 488 (498)
T KOG4237|consen 416 PCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMT 488 (498)
T ss_pred CCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchh
Confidence 11222322 234555544 4444332 45678899999998 67776 66788 899999999877777889999
Q ss_pred ccceeeCCCC
Q 037042 592 YLKDLNLSFN 601 (1002)
Q Consensus 592 ~L~~L~Ls~N 601 (1002)
+|.+|-||+|
T Consensus 489 ql~tlilsyn 498 (498)
T KOG4237|consen 489 QLSTLILSYN 498 (498)
T ss_pred hhheeEEecC
Confidence 9999999887
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-27 Score=230.23 Aligned_cols=253 Identities=20% Similarity=0.290 Sum_probs=185.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeE-EecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISC-CSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~-~~~~~~~~~~~ 781 (1002)
.+.|.+.+.+|+|.||.+-.++.+ ..+.+|+|.+...- ...++|.+|...=-.+ .|.||+.-|++ |...+ +.
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d----~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD----AY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCc----eE
Confidence 467999999999999999999865 57889999887552 3457788887754444 58999988764 33333 55
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee-C-CCCcEEEeccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL-G-DNMVAHLSDFGITKL 859 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl-~-~~~~~kl~DfGla~~ 859 (1002)
..++||++.|+|.+-+...+ +.+....+++.|+++|+.||| ++.+||||||.+|||| + +..+||+||||..+.
T Consensus 98 vF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred EEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccc
Confidence 68999999999999987754 788888999999999999999 9999999999999999 3 445899999999876
Q ss_pred ccCCCceeeeccCCCCcccccccccC---CCC--cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGS---EGR--VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~--~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
.+..- .....+..|-|||... .+. ..+.+|||.||+++|.++||+.||......+..+..|.........
T Consensus 173 ~g~tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 173 VGTTV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP 247 (378)
T ss_pred cCcee-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc
Confidence 54321 1122345588998532 333 4788999999999999999999998766666666666553222211
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCC---CCHHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKR---INAKEIVTRL 985 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---pt~~evl~~L 985 (1002)
++- .... .-.+.++.+.++-+.++|++| .+++...+.+
T Consensus 248 -~~P--~~F~----------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 248 -ALP--KKFN----------PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred -cCc--hhhc----------ccCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 111 0111 112456778888899999999 4444444333
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-28 Score=250.80 Aligned_cols=289 Identities=20% Similarity=0.220 Sum_probs=234.4
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecc-cccccccCcccCCCCCCCCEEe
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGD-NQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
..+.++|..|+|+...|.+|+.+++|+.||||+|+|+.+-|++|.+|.+|..|-+.+ |+|+ .+|...|+.|..|+.|.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHh
Confidence 468999999999977777899999999999999999999999999999988776665 9998 89999999999999999
Q ss_pred CCCCcccccCCccccCCCCCceEEcccccCCCCCcc-ccccccccceeeeccccccccccchhhHHhhhchhhcccCCcc
Q 037042 133 LSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPK-EIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFS 211 (1002)
Q Consensus 133 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~ 211 (1002)
+.-|++.-...+.|..+++|..|.|-.|.+. .++. .|..+..++.+.+..|.+-..-.-.|......
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a----------- 214 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLA----------- 214 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHh-----------
Confidence 9999999888889999999999999999998 5555 89999999999999999654333333322221
Q ss_pred cCCCCccccCccccceeeccCcccccccccccccc-cccceeecccCCCccccCCccccCCCccchhhcccccccccccc
Q 037042 212 KCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNM-STIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPN 290 (1002)
Q Consensus 212 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 290 (1002)
..|.+++..+...-..+.++++..+.+..|... .++..=..+.+...+.-+...|.+|++|+.|+|++|+|+++-+.
T Consensus 215 --~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~ 292 (498)
T KOG4237|consen 215 --MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDG 292 (498)
T ss_pred --hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhh
Confidence 345667777777777788888877666665532 22322222333333455666688899999999999999988888
Q ss_pred cccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 291 FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 291 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
+|.++.++++|.|..|+|..+....|.++++|+.|+|.+|+|+.+.. ++|..+..|.+|+|-.|.+.
T Consensus 293 aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~-----~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 293 AFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP-----GAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred hhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec-----ccccccceeeeeehccCccc
Confidence 99999999999999999988888889999999999999999988754 45888888888888888764
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=236.02 Aligned_cols=199 Identities=30% Similarity=0.435 Sum_probs=170.5
Q ss_pred CCCCceeeccCcceEEEEEeCC-CcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 708 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++.... ..++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~----~~~~v~ 76 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPE----PLYLVM 76 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCC----ceEEEE
Confidence 4567889999999999998764 899999999866544 6778899999999999999999999987665 567999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++++|.+++......+++.....++.+++.++.||| +.+++|+|++|+||+++.++.++|+|||.+........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 999999999999775433788999999999999999999 88999999999999999999999999999987654320
Q ss_pred eeeeccCCCCccccccccc-CCCCcCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 866 FVTQTQTPATIGYMALEYG-SEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
. ......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 154 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 A-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred c-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0 11234567789999987 666788899999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=220.22 Aligned_cols=169 Identities=20% Similarity=0.173 Sum_probs=129.5
Q ss_pred CChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeec
Q 037042 791 GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870 (1002)
Q Consensus 791 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 870 (1002)
|+|.+++...+..+++.+++.|+.||++||+||| +.+ ||+||+++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc------
Confidence 6899999876667999999999999999999999 555 999999999999999 99987654322
Q ss_pred cCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHH
Q 037042 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQF 950 (1002)
Q Consensus 871 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 950 (1002)
..||+.|||||++.+..|+.++|||||||++|||++|+.||.........+..+.... .... +. ..
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~-----~~~~-~~--~~----- 129 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGM-----PADD-PR--DR----- 129 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHh-----ccCC-cc--cc-----
Confidence 2578999999999999999999999999999999999999865432222222221110 0000 00 00
Q ss_pred HhHHHHH--HHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 951 VAKEQCM--SFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 951 ~~~~~~~--~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
....... ..+.+++.+||..+|++||++.|+++|+..+..
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 0011222 268999999999999999999999999987653
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.5e-24 Score=270.75 Aligned_cols=362 Identities=21% Similarity=0.260 Sum_probs=218.6
Q ss_pred CcEEEEEeCCCCCcc--ccCcccCCCCCCCEEEcccCC------CCCCCCccccccc-CCcEEEecccccccccCcccCC
Q 037042 53 HRVTALNISHLSLSG--TIPSRLGNLSSLQSLFLHSNQ------FSGSIPFSIFNIH-TLKLLSFGDNQLSGEIPTNICS 123 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~--~~p~~l~~l~~L~~L~L~~N~------l~~~~p~~~~~l~-~L~~L~L~~N~l~~~ip~~~~~ 123 (1002)
.+|..+.+.-..+.. .-+.++..+++|+.|.+..+. +...+|..+..++ +|+.|++.+|.+. .+|..+
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-- 608 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-- 608 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC--
Confidence 345554444333321 223468889999999997664 3345777777764 5888999888886 777765
Q ss_pred CCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchh
Q 037042 124 NLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIF 203 (1002)
Q Consensus 124 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~ 203 (1002)
...+|++|+|++|++. .+|..+..+++|++|+|++|...+.+|. ++.+++|++|+|++|....
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~--------------- 671 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLV--------------- 671 (1153)
T ss_pred CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCcc---------------
Confidence 4678888888888887 6777788888888888888765556764 7788888888888765322
Q ss_pred hcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccc
Q 037042 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNH 283 (1002)
Q Consensus 204 ~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~ 283 (1002)
++|..++++++|+.|++++|...+.+|..+ ++++|+.|++++|...
T Consensus 672 ----------~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L----------------------- 717 (1153)
T PLN03210 672 ----------ELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRL----------------------- 717 (1153)
T ss_pred ----------ccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCc-----------------------
Confidence 577888888888888888765444556544 5666666666665432
Q ss_pred ccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCC
Q 037042 284 FSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDG 363 (1002)
Q Consensus 284 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 363 (1002)
+.+|.. ..+|++|+|++|.+.. +|..+ .+++|+.|++.++....+...+ ..+..
T Consensus 718 --~~~p~~---~~nL~~L~L~~n~i~~-lP~~~-~l~~L~~L~l~~~~~~~l~~~~------~~l~~------------- 771 (1153)
T PLN03210 718 --KSFPDI---STNISWLDLDETAIEE-FPSNL-RLENLDELILCEMKSEKLWERV------QPLTP------------- 771 (1153)
T ss_pred --cccccc---cCCcCeeecCCCcccc-ccccc-cccccccccccccchhhccccc------cccch-------------
Confidence 223321 2355666666666653 34333 4666777766654433221110 00000
Q ss_pred cccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccc
Q 037042 364 ILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEV 443 (1002)
Q Consensus 364 ~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 443 (1002)
.....+++|+.|++++|...+.+|..++++++|+.|++++|..-+.+|..+ ++++|+.|+|++|..-..+|..
T Consensus 772 -----~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~- 844 (1153)
T PLN03210 772 -----LMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI- 844 (1153)
T ss_pred -----hhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc-
Confidence 011123456666666666666677777777777777777764434555544 5667777777766443344432
Q ss_pred cCCccccEEEccCCcCCccCCccccCCccCcccccccc-cccccCCccccccccCceeeccCC
Q 037042 444 CRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASN-ELISVIPSTFWNLKDILYLNLSSN 505 (1002)
Q Consensus 444 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N 505 (1002)
..+|+.|+|++|.|+ .+|..+..+++|+.|+|++| ++.. +|..+..+++|+.+++++|
T Consensus 845 --~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~-l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 845 --STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQR-VSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred --ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCc-cCcccccccCCCeeecCCC
Confidence 235556666666665 34555555555555555553 2222 3334444444444444444
|
syringae 6; Provisional |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=256.06 Aligned_cols=125 Identities=22% Similarity=0.263 Sum_probs=78.1
Q ss_pred CCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccccccc
Q 037042 297 KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHS 376 (1002)
Q Consensus 297 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 376 (1002)
+|+.|+|++|+|+++ |.. ..+|+.|++++|+|+.+|.. ..+|+.|+|++|+|.+++. .+.+
T Consensus 343 ~Lq~LdLS~N~Ls~L-P~l---p~~L~~L~Ls~N~L~~LP~l---------~~~L~~LdLs~N~Lt~LP~------l~s~ 403 (788)
T PRK15387 343 GLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLTSLPAL---------PSGLKELIVSGNRLTSLPV------LPSE 403 (788)
T ss_pred ccceEecCCCccCCC-CCC---CcccceehhhccccccCccc---------ccccceEEecCCcccCCCC------cccC
Confidence 455555555555532 221 13445555555555554421 1345666666666654422 2245
Q ss_pred ccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccC
Q 037042 377 LKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCR 445 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 445 (1002)
|+.|++++|+|++ +|..+ .+|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+..+..
T Consensus 404 L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 404 LKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred CCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 6777777777764 45432 46778888888888 67888888999999999999998877766533
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-25 Score=273.08 Aligned_cols=203 Identities=15% Similarity=0.186 Sum_probs=142.4
Q ss_pred hccC-CCcceeeeEEecCc---hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEE
Q 037042 758 SIRH-RNIIKIISCCSIGD---FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833 (1002)
Q Consensus 758 ~l~h-~niv~~~~~~~~~~---~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH 833 (1002)
.++| +||+++++++..+. ......+.++||+ +++|.+++......+++.+++.++.||++||+||| +++|+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH---SQGIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHH---hCCeee
Confidence 3455 57888888773322 1112456788987 55999999866556899999999999999999999 999999
Q ss_pred ccCCCCCeeeCC-------------------CCcEEEecccccccccCCCc--------------eeeeccCCCCccccc
Q 037042 834 CDLKPSNVLLGD-------------------NMVAHLSDFGITKLLTREDQ--------------FVTQTQTPATIGYMA 880 (1002)
Q Consensus 834 rDlkp~NILl~~-------------------~~~~kl~DfGla~~~~~~~~--------------~~~~~~~~gt~~y~a 880 (1002)
|||||+|||++. ++.+|++|||+++....... ........||+.|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999954 44566666666654221000 000112357889999
Q ss_pred ccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHH
Q 037042 881 LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFV 960 (1002)
Q Consensus 881 PE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l 960 (1002)
||++.+..|+.++|||||||++|||++|..|+..... ...... ..... ... .......
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-------~~~~~~----~~~~~-----~~~------~~~~~~~ 241 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-------TMSSLR----HRVLP-----PQI------LLNWPKE 241 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-------HHHHHH----HhhcC-----hhh------hhcCHHH
Confidence 9999999999999999999999999999888653210 111000 00000 000 0112334
Q ss_pred HHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 961 FNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 961 ~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+++.+||+++|.+||++.|+++|-+
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h~~ 267 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQSEF 267 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhchh
Confidence 57888999999999999999998754
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=267.59 Aligned_cols=276 Identities=21% Similarity=0.240 Sum_probs=150.7
Q ss_pred CccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccccccccccccc
Q 037042 216 PNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295 (1002)
Q Consensus 216 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 295 (1002)
|..+..+++|+.|+|+++.....+|. +..+++|+.|+|++|.....++. .+..+++|+.|++++|...+.+|..+ ++
T Consensus 627 ~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~-si~~L~~L~~L~L~~c~~L~~Lp~~i-~l 703 (1153)
T PLN03210 627 WDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPS-SIQYLNKLEDLDMSRCENLEILPTGI-NL 703 (1153)
T ss_pred ccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccch-hhhccCCCCEEeCCCCCCcCccCCcC-CC
Confidence 33444444555555544432223332 44444555555554433222222 23445566666666654334566554 68
Q ss_pred CCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccc
Q 037042 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375 (1002)
Q Consensus 296 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 375 (1002)
++|+.|+|++|......|.. .++|+.|+|++|.++.+|..+ .+++|++|++.++....+.
T Consensus 704 ~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP~~~-------~l~~L~~L~l~~~~~~~l~---------- 763 (1153)
T PLN03210 704 KSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEFPSNL-------RLENLDELILCEMKSEKLW---------- 763 (1153)
T ss_pred CCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccccccc-------cccccccccccccchhhcc----------
Confidence 89999999999766566643 467899999999999887532 4677777777665432210
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEcc
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
+.+....|..+...++|+.|+|++|...+.+|.+++++++|+.|++++|..-+.+|..+ ++++|+.|+|+
T Consensus 764 ---------~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls 833 (1153)
T PLN03210 764 ---------ERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLS 833 (1153)
T ss_pred ---------ccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECC
Confidence 01111122223334577777777777666677777777777777777765444555544 56666777776
Q ss_pred CCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCC-CCCCCCcccccccccceeeeCCCC
Q 037042 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSN-SLTGPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 456 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
+|.....+|.. .++|+.|+|++|.++. +|..+..+++|++|+|++| +++ .+|..+..++.|+.+++++|
T Consensus 834 ~c~~L~~~p~~---~~nL~~L~Ls~n~i~~-iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 834 GCSRLRTFPDI---STNISDLNLSRTGIEE-VPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CCCcccccccc---ccccCEeECCCCCCcc-ChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 65433333322 2344555555555443 3444444555555555442 233 23333444444444444433
|
syringae 6; Provisional |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-24 Score=251.17 Aligned_cols=206 Identities=24% Similarity=0.327 Sum_probs=148.2
Q ss_pred ccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeec
Q 037042 224 NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLEL 303 (1002)
Q Consensus 224 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 303 (1002)
+|+.|++++|+|+. +|.. .++|+.|++++|+++. ++. .+++|++|+|++|+|++ +|.. ..+|+.|++
T Consensus 263 sL~~L~Ls~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-LP~----~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~L 329 (788)
T PRK15387 263 GLLELSIFSNPLTH-LPAL---PSGLCKLWIFGNQLTS-LPV----LPPGLQELSVSDNQLAS-LPAL---PSELCKLWA 329 (788)
T ss_pred ccceeeccCCchhh-hhhc---hhhcCEEECcCCcccc-ccc----cccccceeECCCCcccc-CCCC---ccccccccc
Confidence 44445555555442 2221 1334455555555542 221 23567778888887774 4432 246788889
Q ss_pred CCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecC
Q 037042 304 QKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMS 383 (1002)
Q Consensus 304 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~ 383 (1002)
++|+|++ +|.. ..+|+.|+|++|+|+.+|.. ..+|+.|++++|+|..+.. .+.+|+.|+++
T Consensus 330 s~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~LP~l---------p~~L~~L~Ls~N~L~~LP~------l~~~L~~LdLs 390 (788)
T PRK15387 330 YNNQLTS-LPTL---PSGLQELSVSDNQLASLPTL---------PSELYKLWAYNNRLTSLPA------LPSGLKELIVS 390 (788)
T ss_pred ccCcccc-cccc---ccccceEecCCCccCCCCCC---------CcccceehhhccccccCcc------cccccceEEec
Confidence 9999885 3432 25899999999999998742 2568889999999987532 34579999999
Q ss_pred CCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccC
Q 037042 384 DCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSI 463 (1002)
Q Consensus 384 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 463 (1002)
+|+|++ +|.. .++|+.|++++|+|++ +|..+ .+|+.|+|++|+|+ .+|+.++++++|+.|+|++|+|++..
T Consensus 391 ~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~ 461 (788)
T PRK15387 391 GNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERT 461 (788)
T ss_pred CCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchH
Confidence 999985 5543 3679999999999995 56543 46889999999998 78999999999999999999999887
Q ss_pred CccccCC
Q 037042 464 PACFGDL 470 (1002)
Q Consensus 464 p~~~~~l 470 (1002)
+..+..+
T Consensus 462 ~~~L~~l 468 (788)
T PRK15387 462 LQALREI 468 (788)
T ss_pred HHHHHHH
Confidence 7766443
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=211.56 Aligned_cols=254 Identities=20% Similarity=0.279 Sum_probs=199.0
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.-.|.+.++||+|+||+.+.|+ +-++++||||.-... ....++..|.+..+.+. .++|...|-+..++- +-.
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~----~Ni 100 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGK----YNI 100 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccc----hhh
Confidence 4579999999999999999997 567999999985433 23467888999999985 689999987776665 678
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-----CCcEEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-----NMVAHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DfGla 857 (1002)
+|+|.. |.+|+|+..-++..++..++..||.|+..-++|+| .+.+|.|||||+|+||+. ...+.|+|||+|
T Consensus 101 LVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 999988 78999999888888999999999999999999999 899999999999999974 346999999999
Q ss_pred ccccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 858 KLLTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 858 ~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
+.+.+++... ......||-+||+-....+.+.+.+.|+-|+|.|+++.+-|..||.+.-.+.- .+
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn----------K~ 246 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN----------KE 246 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch----------HH
Confidence 9887654321 12334589999999999999999999999999999999999999987432211 11
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCCCCCCCC
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGYPSYAFC 1002 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~~~y~~~ 1002 (1002)
+..+|.+.....+. .+ -|-. =+.|..+.|+-.+..++.+.|||.||
T Consensus 247 kYeKIGe~Kr~T~i--------------~~---Lc~g-------~P~efa~Yl~yvR~L~F~E~PDYdyl 292 (449)
T KOG1165|consen 247 KYEKIGETKRSTPI--------------EV---LCEG-------FPEEFATYLRYVRRLDFFETPDYDYL 292 (449)
T ss_pred HHHHhccccccCCH--------------HH---HHhc-------CHHHHHHHHHHHHhcCcccCCCHHHH
Confidence 22333333222111 11 1111 23577788888888899999998775
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=249.95 Aligned_cols=313 Identities=19% Similarity=0.292 Sum_probs=165.3
Q ss_pred CCChhHHHHHHHHHHhccCCCCCccccC----CCCCCCCCcccc--------------cEeeCCCCcEEEEEeCCCCCcc
Q 037042 6 SNITTDLDALHALKTHITNDPTNFFAKN----WNSSISFCNWTG--------------VTCDVHSHRVTALNISHLSLSG 67 (1002)
Q Consensus 6 ~~~~~~~~~l~~~k~~~~~~~~~~~~~~----w~~~~~~c~w~g--------------v~c~~~~~~v~~L~l~~~~l~~ 67 (1002)
..+..|.+.++...+.+.. |.- .++ |++++++|-=+. .+-+...+.||.+...+.....
T Consensus 59 ~~~~~~~~~~~~~~~~l~~-p~~--~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~ 135 (754)
T PRK15370 59 TASPEEIKSKFECLRMLAF-PAY--ADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQAS 135 (754)
T ss_pred CCCHHHHHHHHHHHHHhcC-Cch--hhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCcccccccccccccc
Confidence 3467888999999999854 432 346 999999996544 2222234567777665532221
Q ss_pred ccCcccCCCCCCCEEEc----ccCCCCCCCC---ccc-----ccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 68 TIPSRLGNLSSLQSLFL----HSNQFSGSIP---FSI-----FNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 68 ~~p~~l~~l~~L~~L~L----~~N~l~~~~p---~~~-----~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
... +.-+.-.+... ..+.-.+.-+ ..+ .-..+.+.|+++++.++ .+|..+. +.|+.|+|++
T Consensus 136 ~~~---~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip---~~L~~L~Ls~ 208 (754)
T PRK15370 136 SAS---GSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP---EQITTLILDN 208 (754)
T ss_pred cCC---CCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc---cCCcEEEecC
Confidence 110 00000000000 0000000000 000 00123455555555555 4554432 3455556666
Q ss_pred CcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI 215 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 215 (1002)
|+|+ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|++|.++ .+
T Consensus 209 N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~--------------------------~L 256 (754)
T PRK15370 209 NELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT--------------------------EL 256 (754)
T ss_pred CCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC--------------------------cC
Confidence 6555 3444333 35666666666655 4444432 24566666666554 23
Q ss_pred CccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccccccccccccc
Q 037042 216 PNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295 (1002)
Q Consensus 216 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 295 (1002)
|..+. ++|+.|+|++|+|+. +|..+. ++|+.|+|++|+|++.... -.++|++|++++|+++. +|..+ .
T Consensus 257 P~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~LP~~----lp~sL~~L~Ls~N~Lt~-LP~~l--~ 324 (754)
T PRK15370 257 PERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRTLPAH----LPSGITHLNVQSNSLTA-LPETL--P 324 (754)
T ss_pred ChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccccCccc----chhhHHHHHhcCCcccc-CCccc--c
Confidence 33332 355666666666653 344433 3566666666666532111 12467778888888774 44433 2
Q ss_pred CCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccc
Q 037042 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375 (1002)
Q Consensus 296 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 375 (1002)
++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+.+|..+ .++|+.|+|++|.|..+++ .++.
T Consensus 325 ~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~LP~~l--------p~~L~~LdLs~N~Lt~LP~-----~l~~ 388 (754)
T PRK15370 325 PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITVLPETL--------PPTITTLDVSRNALTNLPE-----NLPA 388 (754)
T ss_pred ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCcCChhh--------cCCcCEEECCCCcCCCCCH-----hHHH
Confidence 578888888888875 455443 67888888888888776532 2467777777777765432 1223
Q ss_pred cccEEecCCCCCC
Q 037042 376 SLKIFDMSDCNVS 388 (1002)
Q Consensus 376 ~L~~L~L~~N~l~ 388 (1002)
+|+.|++++|+|.
T Consensus 389 sL~~LdLs~N~L~ 401 (754)
T PRK15370 389 ALQIMQASRNNLV 401 (754)
T ss_pred HHHHHhhccCCcc
Confidence 4555555555554
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-23 Score=245.09 Aligned_cols=238 Identities=22% Similarity=0.376 Sum_probs=166.9
Q ss_pred CcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcc
Q 037042 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTN 120 (1002)
Q Consensus 41 c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~ 120 (1002)
+-|.-..|-. ...+.|+|++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..
T Consensus 168 a~~r~~~Cl~--~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~ 238 (754)
T PRK15370 168 AVQRMRDCLK--NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPAT 238 (754)
T ss_pred HHHHHHhhcc--cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChh
Confidence 3455556754 35789999999998 5787764 58999999999999 6787665 58999999999998 67876
Q ss_pred cCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhh
Q 037042 121 ICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVK 200 (1002)
Q Consensus 121 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 200 (1002)
+. ++|+.|+|++|.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++
T Consensus 239 l~---~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~------------ 297 (754)
T PRK15370 239 LP---DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT------------ 297 (754)
T ss_pred hh---ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc------------
Confidence 53 47899999999998 6777665 47999999999998 5777664 479999999998874
Q ss_pred chhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcc
Q 037042 201 NIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLW 280 (1002)
Q Consensus 201 ~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls 280 (1002)
+|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.+++..... .++|+.|+|+
T Consensus 298 --------------LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~LP~~l----~~sL~~L~Ls 354 (754)
T PRK15370 298 --------------LPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTSLPASL----PPELQVLDVS 354 (754)
T ss_pred --------------Ccccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCccccCChhh----cCcccEEECC
Confidence 343332 468888888888875 444332 46777777777766422111 2566667777
Q ss_pred cccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchh
Q 037042 281 GNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTL 337 (1002)
Q Consensus 281 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~ 337 (1002)
+|+|+ .+|..+ .++|++|+|++|+|+.+ |..+. .+|+.|++++|+|+.+|.
T Consensus 355 ~N~L~-~LP~~l--p~~L~~LdLs~N~Lt~L-P~~l~--~sL~~LdLs~N~L~~LP~ 405 (754)
T PRK15370 355 KNQIT-VLPETL--PPTITTLDVSRNALTNL-PENLP--AALQIMQASRNNLVRLPE 405 (754)
T ss_pred CCCCC-cCChhh--cCCcCEEECCCCcCCCC-CHhHH--HHHHHHhhccCCcccCch
Confidence 77666 345443 24666666666666643 33332 246666666666666554
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.9e-23 Score=224.89 Aligned_cols=165 Identities=19% Similarity=0.193 Sum_probs=128.5
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC--CCcEEEEEEeecc-----cchhHHHHHHHHHHHHhccCCCcce-eeeEEecCc
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ--DGMEVAVKVFNQQ-----CGRAFKSFDVECEVMKSIRHRNIIK-IISCCSIGD 775 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~ 775 (1002)
..++|+..+.||+|+||+||+|+.. +++.||||++... .......+.+|++++++++|+||++ ++++ +
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~- 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G- 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C-
Confidence 3567999999999999999999754 5788899987533 1223567899999999999999985 4432 1
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccC-CCCCeeeCCCCcEEEecc
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDL-KPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDl-kp~NILl~~~~~~kl~Df 854 (1002)
..++||||++|++|... ... . ...++.++++||+||| +++|+|||| ||+|||++.++.+||+||
T Consensus 92 ----~~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 92 ----KDGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred ----CcEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 24799999999999632 111 1 1467889999999999 899999999 999999999999999999
Q ss_pred cccccccCCCceee------eccCCCCcccccccccCCC
Q 037042 855 GITKLLTREDQFVT------QTQTPATIGYMALEYGSEG 887 (1002)
Q Consensus 855 Gla~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 887 (1002)
|+|+.+........ .+...+++.|+|||++...
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99997755432111 1345678889999986543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=197.82 Aligned_cols=201 Identities=23% Similarity=0.308 Sum_probs=170.0
Q ss_pred hcCCCCCceeeccCcceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhccC-CCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH-RNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~ 782 (1002)
...|..+++||.|+||.+|.|. ..+|++||||+-..... ..++..|..+.+.++| ..|..+..|..+.+ +..
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~----ynv 87 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKD----YNV 87 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccc----cce
Confidence 4579999999999999999997 67899999998654432 3567789999999975 67888877777666 668
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~ 859 (1002)
+|||.. |.+|+++..-+...++..+++.+|-|+..-++|+| .++++||||||+|+|++- ...+.++|||+|+.
T Consensus 88 lVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred eeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhh
Confidence 999988 88999999888778999999999999999999999 899999999999999963 45799999999998
Q ss_pred ccCCCc-----eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccc
Q 037042 860 LTREDQ-----FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915 (1002)
Q Consensus 860 ~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~ 915 (1002)
+.+... ........||.+|.+-....+...+.+.|+-|+|.++.++--|..||.+.
T Consensus 164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 164 YRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred hccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 754321 12234567999999988888888899999999999999999999999875
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=217.11 Aligned_cols=261 Identities=20% Similarity=0.237 Sum_probs=192.8
Q ss_pred CCCCCceeeccCcceEEEEEeCC--CcEEEEEEeecccchhHHHHHHHHHHHHhccC----CCcceeeeEEe-cCchhhH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQD--GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH----RNIIKIISCCS-IGDFKAL 779 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~-~~~~~~~ 779 (1002)
+|.+.+.||+|+||.||.|.... ...+|+|+...........+..|+.++..+.. +++..+++... ...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~---- 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED---- 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc----
Confidence 79999999999999999998654 35899998776533333377889999998873 58888888773 444
Q ss_pred HHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-----CcEEEec
Q 037042 780 FKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-----MVAHLSD 853 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-----~~~kl~D 853 (1002)
+.++||+.+ |.+|.++..... ..++..++..|+.|++.+|+++| +.|++||||||+|+.++.. ..+.+.|
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 668999987 779999886554 57999999999999999999999 9999999999999999854 4699999
Q ss_pred ccccc--cccCCCc----ee-e-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHH
Q 037042 854 FGITK--LLTREDQ----FV-T-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHW 925 (1002)
Q Consensus 854 fGla~--~~~~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~ 925 (1002)
||+|+ .+..... .. . .....||..|+++.+..+...+.+.|+||++.++.|+..|..||........ ....
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~ 249 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKF 249 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHH
Confidence 99998 3322211 11 1 1345699999999999999999999999999999999999999966432211 1111
Q ss_pred HHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 926 VNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 926 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.... ....... .....+..+.+++..+-..+...+|....+...++.....
T Consensus 250 ~~~~----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 250 EKDP----RKLLTDR-----------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred HHHh----hhhcccc-----------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 1100 0000000 0011234455666666668889999999998887766543
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-23 Score=202.25 Aligned_cols=246 Identities=20% Similarity=0.309 Sum_probs=186.1
Q ss_pred CCceeeccCcceEEEEEeCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhcc
Q 037042 710 ENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
...+|.+...|+.|+|+|. |..+++|+++-. ..+...+|..|.-.++-+.||||..+++.|.... ...++..|
T Consensus 194 l~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp----nlv~isq~ 268 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP----NLVIISQY 268 (448)
T ss_pred hhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC----CceEeeee
Confidence 3456788889999999998 556677776532 2344567888999998899999999999997765 66789999
Q ss_pred CCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEe--cccccccccCCC
Q 037042 788 MPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLS--DFGITKLLTRED 864 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~--DfGla~~~~~~~ 864 (1002)
|+.|+|...++.... ..+..++.++|.+||+|++|||.. .+-|.---+.+..+++|++.+++|. |-.++.
T Consensus 269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf------ 341 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF------ 341 (448)
T ss_pred ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee------
Confidence 999999999998655 677788999999999999999953 3334445688999999999988874 221111
Q ss_pred ceeeeccCCCCcccccccccCCCCc---CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRV---STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...+..-.+.||+||.+...+- -.++|+|||.+++||+.|...||.+..+-+-.. +
T Consensus 342 ---qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm-------------k----- 400 (448)
T KOG0195|consen 342 ---QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM-------------K----- 400 (448)
T ss_pred ---eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh-------------h-----
Confidence 1122334677999998776543 457999999999999999999998854421100 1
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
..-++.+...|+.....+.++|.-|++.||.+||.+..++-.|+++.
T Consensus 401 -ialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 401 -IALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -hhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 11122233344556777899999999999999999999999998864
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-22 Score=235.20 Aligned_cols=254 Identities=20% Similarity=0.215 Sum_probs=185.8
Q ss_pred CCceeeccCcceEEEEEe-CCCcEEEEEEee----cc-cch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 710 ENNLIGRGGFGSVYKARI-QDGMEVAVKVFN----QQ-CGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~----~~-~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..+.+|.|++|.|+.+.. ...+..+.|.++ .. ... ....+..|+.+-..+.|||++..+..+.+.. ...
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~----~~~ 397 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID----GIL 397 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc----cch
Confidence 457899999998887753 334444555432 11 111 1222666888888899999987776655443 222
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
-+||||++ +|..++.+.. .+....+-.++.|+..|++|+| ..||.|||+|++|++++.+|.+||+|||.+..+.-
T Consensus 398 ~~mE~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 398 QSMEYCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hhhhcccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeecc
Confidence 34999999 9999998763 3777888899999999999999 99999999999999999999999999999876644
Q ss_pred CCce--eeeccCCCCcccccccccCCCCcCcc-cchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQF--VTQTQTPATIGYMALEYGSEGRVSTN-GDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
+... ....+.+|...|+|||+..+.+|.+. +||||.|+++..|.+|+.||..+...+....+ ....+
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~----------~~~~~ 542 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT----------NNYSD 542 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh----------hcccc
Confidence 3332 34567889999999999999999654 89999999999999999999887555433200 00000
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+........+ .....+..-..++.+|++++|.+|.|+++|++.
T Consensus 543 ~~~~~~~~~~--~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 543 QRNIFEGPNR--LLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ccccccChHH--HHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 0000001111 123455667889999999999999999999875
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.8e-20 Score=205.66 Aligned_cols=258 Identities=29% Similarity=0.379 Sum_probs=195.2
Q ss_pred CCCCceeeccCcceEEEEEeCCCcEEEEEEeecccch---hHHHHHHHHHHHHhccCC-CcceeeeEEecCchhhHHHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR---AFKSFDVECEVMKSIRHR-NIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~l 783 (1002)
|...+.||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +|+++++++.... ..++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~~~ 75 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG----SLYL 75 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC----EEEE
Confidence 566788999999999999876 78999998765332 367889999999999988 7999999985554 2579
Q ss_pred hhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~ 860 (1002)
+++|+.++++.+++..... .+.......++.|++.+++|+| ..+++|||+||+||+++..+ .++++|||.++..
T Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~ 152 (384)
T COG0515 76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLL 152 (384)
T ss_pred EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence 9999999999977766542 5888899999999999999999 89999999999999999888 7999999999865
Q ss_pred cCCCcee----eeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccc--cccHHHHHHHHHh
Q 037042 861 TREDQFV----TQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE--GMTLKHWVNDWLL 931 (1002)
Q Consensus 861 ~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~--~~~~~~~~~~~~~ 931 (1002)
....... ......|+..|+|||...+ ..+....|+||+|++++++++|..||...... .......+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---- 228 (384)
T COG0515 153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL---- 228 (384)
T ss_pred CCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH----
Confidence 5433221 2355679999999999877 57899999999999999999999996654321 011111100
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
....+......... ........+.+++.+|+..+|..|.++.+...+
T Consensus 229 ----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 229 ----ELPTPSLASPLSPS--NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ----hcCCcccccccCcc--ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000000000000 001223568899999999999999999988876
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=9e-21 Score=219.68 Aligned_cols=248 Identities=20% Similarity=0.238 Sum_probs=176.2
Q ss_pred CCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccc-hhHHHH---HHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG-RAFKSF---DVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+|...+.||.+.|=.|.+|+.++|. |+||++-+... .....+ ..|++ ...++|||++++..+..... ..|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k----AAy 97 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK----AAY 97 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH----HHH
Confidence 4556688999999999999998887 99999876542 222333 33444 55568999999876644333 668
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc-c
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL-T 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~-~ 861 (1002)
||-+|+.+ +|.|.+.... .+...+.+.||.|+..|+..+| ..+|+|+|||.+|||++.=.-+.|+||..-+.. -
T Consensus 98 lvRqyvkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYL 172 (1431)
T KOG1240|consen 98 LVRQYVKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYL 172 (1431)
T ss_pred HHHHHHhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccC
Confidence 99999977 9999997654 4778888999999999999999 999999999999999999889999999865432 1
Q ss_pred CCCceeee----ccCCCCcccccccccCC----------CC-cCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHH
Q 037042 862 REDQFVTQ----TQTPATIGYMALEYGSE----------GR-VSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHW 925 (1002)
Q Consensus 862 ~~~~~~~~----~~~~gt~~y~aPE~~~~----------~~-~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~ 925 (1002)
+.+..... .....-..|+|||.+.. .+ .+++-||||.||+++|+++ |++||.-. +.
T Consensus 173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--------QL 244 (1431)
T KOG1240|consen 173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--------QL 244 (1431)
T ss_pred CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH--------HH
Confidence 12211111 11223346999996543 12 6788999999999999999 67777531 11
Q ss_pred HHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 926 VNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 926 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..+ ..+. ....+.....-....+.+++..|++.||++|.++++.++.-
T Consensus 245 ~aY---------r~~~---~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 245 LAY---------RSGN---ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred HhH---------hccC---ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 111 0000 01111111111223578899999999999999999998873
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.5e-21 Score=194.42 Aligned_cols=174 Identities=11% Similarity=0.119 Sum_probs=133.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHH---------HHHHHHHHHHhccCCCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFK---------SFDVECEVMKSIRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---------~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1002)
..+|+..+++|.|+||.||.+.. ++..+|||+++........ .+++|++.+.++.||+|.....++....
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 57899999999999999999766 5778999999754332222 2688999999999999999998865433
Q ss_pred hhh----HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 776 FKA----LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 776 ~~~----~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
... ...++||||++|.+|.++.. .+. ....+++.++..+| ..+++|||+||+||+++.++ +++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~l 175 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRI 175 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEE
Confidence 111 13578999999999988732 222 34669999999999 99999999999999999988 999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETF 906 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell 906 (1002)
+|||........... ..+.....|..++|+|||||++....
T Consensus 176 iDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 176 IDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999988654322110 11344455778999999999876543
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.6e-22 Score=182.38 Aligned_cols=162 Identities=35% Similarity=0.582 Sum_probs=148.4
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.++|.|.||||.++ .+|+.+.+|.+|++|++++|+++ .+|.++.++++|++|+++-|++. .+|..+ +.+|.|+.||
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgf-gs~p~levld 108 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGF-GSFPALEVLD 108 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCcccc-CCCchhhhhh
Confidence 57899999999998 89999999999999999999999 89999999999999999999997 677765 7799999999
Q ss_pred CCCCcccc-cCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcc
Q 037042 133 LSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFS 211 (1002)
Q Consensus 133 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~ 211 (1002)
|++|.+.. .+|..|..++.|+-|+|++|.|. .+|+.+++|++|+.|.+..|.+-
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll------------------------ 163 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL------------------------ 163 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh------------------------
Confidence 99999984 68999999999999999999998 89999999999999999999986
Q ss_pred cCCCCccccCccccceeeccCcccccccccccccc
Q 037042 212 KCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNM 246 (1002)
Q Consensus 212 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 246 (1002)
++|.+++.|+.|+.|++.+|+++ ++|..++++
T Consensus 164 --~lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 164 --SLPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred --hCcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 68999999999999999999998 667766654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.5e-20 Score=185.95 Aligned_cols=140 Identities=17% Similarity=0.158 Sum_probs=108.7
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccch--h------------------------HHHHHHHHHHHHhccCCCc
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR--A------------------------FKSFDVECEVMKSIRHRNI 764 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~ni 764 (1002)
...||+|+||.||+|...+|+.||||+++..... . ......|++.++++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999999778999999999754211 0 1223459999999988877
Q ss_pred ceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHH-HcCCCCCcEEccCCCCCeee
Q 037042 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL-YFGYSTPVIHCDLKPSNVLL 843 (1002)
Q Consensus 765 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~~~iiHrDlkp~NILl 843 (1002)
.....+.... .++||||++++++....... ..++......++.|++.++.|+ | ..+|+||||||+||++
T Consensus 82 ~~p~~~~~~~------~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli 151 (190)
T cd05147 82 PCPEPILLKS------HVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLY 151 (190)
T ss_pred CCCcEEEecC------CEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEE
Confidence 5443332211 26999999998776553322 3578889999999999999999 6 7899999999999999
Q ss_pred CCCCcEEEeccccccccc
Q 037042 844 GDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 844 ~~~~~~kl~DfGla~~~~ 861 (1002)
+ ++.++|+|||+|....
T Consensus 152 ~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 152 H-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred E-CCcEEEEEccccccCC
Confidence 8 4789999999997543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.9e-19 Score=181.25 Aligned_cols=140 Identities=21% Similarity=0.247 Sum_probs=110.8
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccch--------------------------hHHHHHHHHHHHHhccCCCc
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR--------------------------AFKSFDVECEVMKSIRHRNI 764 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~ni 764 (1002)
...||+|+||.||+|+..+|+.||||+++..... .......|++.+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999998778999999998754210 01224578999999999987
Q ss_pred ceeeeEEecCchhhHHHHHhhccCCCCChhHh-hhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCee
Q 037042 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKY-LYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVL 842 (1002)
Q Consensus 765 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NIL 842 (1002)
.....+.... .++||||++++++... +.. ..++......++.|++.++.++| . .+|+||||||+||+
T Consensus 82 ~~p~~~~~~~------~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIl 150 (190)
T cd05145 82 PVPEPILLKK------NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNIL 150 (190)
T ss_pred CCceEEEecC------CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEE
Confidence 5544433222 2699999998865443 332 24677888999999999999999 7 99999999999999
Q ss_pred eCCCCcEEEecccccccccC
Q 037042 843 LGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 843 l~~~~~~kl~DfGla~~~~~ 862 (1002)
++ ++.++|+|||+|.....
T Consensus 151 l~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 151 YH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EE-CCCEEEEEcccceecCC
Confidence 98 89999999999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-20 Score=173.20 Aligned_cols=161 Identities=33% Similarity=0.529 Sum_probs=132.4
Q ss_pred CCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchh
Q 037042 124 NLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIF 203 (1002)
Q Consensus 124 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~ 203 (1002)
++..++.|.||+|+++ .+|..+..+.+|++|++++|+++ .+|.+++.+++|+.|+++-|++.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~---------------- 92 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN---------------- 92 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh----------------
Confidence 4666777888888888 77778889999999999999998 88888999999999999988886
Q ss_pred hcccCCcccCCCCccccCccccceeeccCccccc-ccccccccccccceeecccCCCccccCCccccCCCccchhhcccc
Q 037042 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG-VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGN 282 (1002)
Q Consensus 204 ~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N 282 (1002)
.+|..||.++.|++|||.+|++.. .+|..|+.+..| +.|+|++|
T Consensus 93 ----------~lprgfgs~p~levldltynnl~e~~lpgnff~m~tl-------------------------ralyl~dn 137 (264)
T KOG0617|consen 93 ----------ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTL-------------------------RALYLGDN 137 (264)
T ss_pred ----------cCccccCCCchhhhhhccccccccccCCcchhHHHHH-------------------------HHHHhcCC
Confidence 578889999999999999888863 456666655544 45555555
Q ss_pred cccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhh
Q 037042 283 HFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLEL 339 (1002)
Q Consensus 283 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~ 339 (1002)
.+. .+|..++++++|+.|.+.+|.+- ..|..++.++.|++|++.+|+++.+|.++
T Consensus 138 dfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel 192 (264)
T KOG0617|consen 138 DFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPEL 192 (264)
T ss_pred Ccc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChhh
Confidence 554 77888999999999999999987 57889999999999999999999999875
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-19 Score=201.27 Aligned_cols=224 Identities=23% Similarity=0.272 Sum_probs=174.6
Q ss_pred eeccCcceEEEEE----eCCCcEEEEEEeecccc--hhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHHhhc
Q 037042 714 IGRGGFGSVYKAR----IQDGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 714 lG~G~~g~Vy~~~----~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+|+|+||.|+.++ .+.|.-+|+|+.++... +.......|..++..++ ||.+|++.-.+.... ..+++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~----kl~l~ld 77 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG----KLYLILD 77 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc----chhHhhh
Confidence 7999999999875 33577899998876431 11225566888888886 999999988877665 6789999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|..+|++...+..... .+......+...++-|++++| +.+|+|||+|++||+++.+|.+|+.|||+++..-..+.
T Consensus 78 ~~rgg~lft~l~~~~~-f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~- 152 (612)
T KOG0603|consen 78 FLRGGDLFTRLSKEVM-FDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI- 152 (612)
T ss_pred hcccchhhhccccCCc-hHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh-
Confidence 9999999888876554 556666677788899999999 99999999999999999999999999999987654432
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
.+||..|||||++. ....++|.||||++++||+||..||... . +..|....
T Consensus 153 -----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~---------~--------~~~Il~~~----- 203 (612)
T KOG0603|consen 153 -----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD---------T--------MKRILKAE----- 203 (612)
T ss_pred -----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH---------H--------HHHHhhhc-----
Confidence 18999999999988 6788999999999999999999999761 0 11111111
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINA 978 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~ 978 (1002)
...+.+......+++..+...+|..|.-.
T Consensus 204 ---~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 204 ---LEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ---cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 11234455667778888888888888754
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-18 Score=173.60 Aligned_cols=186 Identities=13% Similarity=0.071 Sum_probs=138.2
Q ss_pred CCCceeeccCcceEEEEEeCCCcEEEEEEeecccc----hhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHH
Q 037042 709 SENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG----RAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.+...|++|+||+||.+.. .+.+++.+.+..... .....+.+|+++|+++. |++|++++++. ..++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~--------~~~l 75 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD--------GRHL 75 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc--------CEEE
Confidence 3457899999999998766 577888777764422 11235789999999995 58899998862 2369
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccC-CCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDL-KPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDl-kp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|||+.|.+|...... ....++.|++++++++| ..+|+|||| ||+|||++.++.++|+|||+|....+
T Consensus 76 vmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 76 DRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP 144 (218)
T ss_pred EEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence 9999999998654321 11357789999999999 999999999 79999999999999999999986554
Q ss_pred CCce----e--e-----eccCCCCcccccccccCCC-CcC-cccchHHHHHHHHHHHhCCCCCcc
Q 037042 863 EDQF----V--T-----QTQTPATIGYMALEYGSEG-RVS-TNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 863 ~~~~----~--~-----~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
.... . . ......++.|++|+-..-- ..+ ...+.++-|..+|.++|++.|+..
T Consensus 145 ~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 145 RARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 3321 0 0 1112256778888742221 223 567899999999999999998654
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=5e-19 Score=184.02 Aligned_cols=200 Identities=18% Similarity=0.197 Sum_probs=136.5
Q ss_pred cCCCcceeeeEEecCchh-----------------------hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHH
Q 037042 760 RHRNIIKIISCCSIGDFK-----------------------ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDV 816 (1002)
Q Consensus 760 ~h~niv~~~~~~~~~~~~-----------------------~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i 816 (1002)
+|||||++.++|.++-.. ....|+||..++. +|.+++.... .+.....-|..|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHH
Confidence 499999998876442111 1122577777755 8888887654 3455566788999
Q ss_pred HHHHHHHHcCCCCCcEEccCCCCCeee--CCC--CcEEEecccccccccCCCc---ee-eeccCCCCcccccccccCCCC
Q 037042 817 ASALEYLYFGYSTPVIHCDLKPSNVLL--GDN--MVAHLSDFGITKLLTREDQ---FV-TQTQTPATIGYMALEYGSEGR 888 (1002)
Q Consensus 817 a~~l~~LH~~~~~~iiHrDlkp~NILl--~~~--~~~kl~DfGla~~~~~~~~---~~-~~~~~~gt~~y~aPE~~~~~~ 888 (1002)
++|+.||| +++|.|||+|++|||+ |+| ....|+|||++-.-+...- +. ......|.-.-||||+....+
T Consensus 351 LEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999 9999999999999999 344 4578999998753322110 00 011223555689999864322
Q ss_pred ------cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHH
Q 037042 889 ------VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFN 962 (1002)
Q Consensus 889 ------~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~ 962 (1002)
--.|+|.|+.|.+.||+++..-||+...+.-.+.+.+. +..-...++.++..+.+
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-------------------e~qLPalp~~vpp~~rq 488 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-------------------ESQLPALPSRVPPVARQ 488 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh-------------------hhhCCCCcccCChHHHH
Confidence 24689999999999999999999987322211111110 01111134567788999
Q ss_pred HHhHccccCCCCCCCHHHHHHH
Q 037042 963 MAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 963 li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
++...++.||.+|+++.-+...
T Consensus 489 lV~~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred HHHHHhcCCccccCCccHHHhH
Confidence 9999999999999997655443
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2e-18 Score=192.90 Aligned_cols=220 Identities=26% Similarity=0.379 Sum_probs=164.7
Q ss_pred HHhccCCCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCc-EEc
Q 037042 756 MKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV-IHC 834 (1002)
Q Consensus 756 l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i-iHr 834 (1002)
|+.+.|.|+.+++|.+..+. ..+.|.+||..|+|.|.+......+++.....+..+|+.||+|+| ..+| .|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~----~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh---~s~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP----EMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLH---NSPIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecCC----ceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHh---cCcceeee
Confidence 45789999999999998875 667899999999999999887767999999999999999999999 4444 999
Q ss_pred cCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCC-------cCcccchHHHHHHHHHHHh
Q 037042 835 DLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR-------VSTNGDVYNFGVMLMETFT 907 (1002)
Q Consensus 835 Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwSlGv~l~ellt 907 (1002)
.+++.|.++|....+||+|||+.................-..-|.|||.+.... .+.++||||||++++|+++
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred eeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 999999999999999999999987664311111112222344599999876631 4677999999999999999
Q ss_pred CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 908 GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 908 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.+.||+........ .+.+.. +.+ ++......... ...+....+..++.+||..+|+.||+++.+-..++.
T Consensus 154 r~~~~~~~~~~~~~-~eii~~-----~~~--~~~~~~rP~i~--~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~ 223 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDP-DEIILR-----VKK--GGSNPFRPSIE--LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT 223 (484)
T ss_pred ccCccccccccCCh-HHHHHH-----HHh--cCCCCcCcchh--hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence 99999875443332 121111 111 01111111111 011445578999999999999999999999999988
Q ss_pred hcccC
Q 037042 988 INDLD 992 (1002)
Q Consensus 988 i~~~~ 992 (1002)
+....
T Consensus 224 ~~~~~ 228 (484)
T KOG1023|consen 224 INKGG 228 (484)
T ss_pred hcccc
Confidence 87654
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-20 Score=205.64 Aligned_cols=210 Identities=22% Similarity=0.252 Sum_probs=113.8
Q ss_pred ccCCCCCccEEEccCCccCccCCccccCCCC---CCEEEccCCcccc----cCCccccCC-ccccEEEccCCcCCcc---
Q 037042 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQK---LQVLYFPDNKLEG----SIPDEVCRL-AKVYQLDLSNNKLSGS--- 462 (1002)
Q Consensus 394 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~~~--- 462 (1002)
.+..+++|+.|++++|.+.+..+..+..+.+ |+.|++++|++++ .+...+..+ ++|+.|+|++|.+++.
T Consensus 76 ~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 155 (319)
T cd00116 76 GLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE 155 (319)
T ss_pred HHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH
Confidence 3444455555555555554433433433333 5555555555542 122233344 5566666666665521
Q ss_pred -CCccccCCccCccccccccccccc----CCccccccccCceeeccCCCCCCC----CcccccccccceeeeCCCCccCc
Q 037042 463 -IPACFGDLASLRNLSLASNELISV----IPSTFWNLKDILYLNLSSNSLTGP----LPLEIGNLKVLVKIDFSMNNFSG 533 (1002)
Q Consensus 463 -~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~ 533 (1002)
++..+..+++|++|++++|.+.+. ++..+...++|+.|++++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 156 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 156 ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 223344455566666666665531 222333445666777776666532 22334556667777777777664
Q ss_pred cCccccc-----CCccccEEEccCeeecc----cCCcccccccccceeccccccccCC----CcccccCC-CccceeeCC
Q 037042 534 VIPNAIG-----GIKDLQFLFLEYNILQG----SIPDSFGDLMSLKSLNLSNNNLSGS----IPVSLEKL-SYLKDLNLS 599 (1002)
Q Consensus 534 ~~p~~~~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls 599 (1002)
.....+. ....|+.|++++|.++. .+...+..+++|+.+++++|.++.. +...+... +.|+.+++.
T Consensus 236 ~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (319)
T cd00116 236 AGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVK 315 (319)
T ss_pred HHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccC
Confidence 3222222 13677777777777752 2334455567777888888877743 33344444 577777777
Q ss_pred CCcC
Q 037042 600 FNKL 603 (1002)
Q Consensus 600 ~N~l 603 (1002)
+|+|
T Consensus 316 ~~~~ 319 (319)
T cd00116 316 DDSF 319 (319)
T ss_pred CCCC
Confidence 7764
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-20 Score=205.87 Aligned_cols=282 Identities=22% Similarity=0.195 Sum_probs=137.2
Q ss_pred EEEeCCCCCc-cccCcccCCCCCCCEEEcccCCCCCC----CCcccccccCCcEEEecccccccccCc------ccCCCC
Q 037042 57 ALNISHLSLS-GTIPSRLGNLSSLQSLFLHSNQFSGS----IPFSIFNIHTLKLLSFGDNQLSGEIPT------NICSNL 125 (1002)
Q Consensus 57 ~L~l~~~~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~------~~~~~l 125 (1002)
.|+|..+.++ +..+..+..+++|++|+|+++.++.. ++..+...++|++|+++++.+.+ .+. ..+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHHHHHHHHHHhc
Confidence 3556666665 34445555666666666666666432 44445555556666666665542 111 112334
Q ss_pred CCCCEEeCCCCcccccCCccccCCCC---CceEEcccccCCC----CCccccccc-cccceeeeccccccccccchhhHH
Q 037042 126 PFFESLNLSKNMFHGGIPSALSNCTY---LRILRLSYNDFAG----GIPKEIGNL-TKLEELYLSFNGLQGAYDHGFLQI 197 (1002)
Q Consensus 126 ~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~ 197 (1002)
++|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|++|+|++|.+++....
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~----- 155 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE----- 155 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH-----
Confidence 55555555555555444444443333 5555555555542 122233344 4555555555555431100
Q ss_pred hhhchhhcccCCcccCCCCccccCccccceeeccCcccccc----cccccccccccceeecccCCCccccCCccccCCCc
Q 037042 198 FVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV----IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPN 273 (1002)
Q Consensus 198 ~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 273 (1002)
.++..+..+++|++|+|++|.+++. ++..+.. +++
T Consensus 156 ----------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~-------------------------~~~ 194 (319)
T cd00116 156 ----------------ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKA-------------------------NCN 194 (319)
T ss_pred ----------------HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHh-------------------------CCC
Confidence 1222333444555555555555421 1112222 234
Q ss_pred cchhhccccccccc----ccccccccCCCCeeecCCCccCCCCcccccc-----ccccchhccccccCccchhhhhhhcc
Q 037042 274 LEELYLWGNHFSGS----IPNFIFNASKLSRLELQKNSFSGFIPSTFGN-----LRNLKRLGLNNNHLTSLTLELSFLSS 344 (1002)
Q Consensus 274 L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~l~~~~~~~~~ 344 (1002)
|++|+|++|.+++. ++..+..+++|++|++++|.+++.....+.. .++|+.|++++|.++.... ..+...
T Consensus 195 L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~-~~l~~~ 273 (319)
T cd00116 195 LEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGA-KDLAEV 273 (319)
T ss_pred CCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHH-HHHHHH
Confidence 55555555554422 2233445566777777777666433322222 2567777777777653211 112233
Q ss_pred cCCCCCCcEEeCCCCCCCCcccccc---cccccccccEEecCCCC
Q 037042 345 LSNCKYLEFIDLSSNSIDGILSRKS---VGNLSHSLKIFDMSDCN 386 (1002)
Q Consensus 345 l~~l~~L~~L~Ls~N~l~~~~~~~~---~~~~~~~L~~L~L~~N~ 386 (1002)
+..+++|+++++++|.+........ .......|+.+++.+|.
T Consensus 274 ~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 274 LAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 4555777777777777764321111 11112457777777664
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.5e-18 Score=178.28 Aligned_cols=234 Identities=20% Similarity=0.257 Sum_probs=144.1
Q ss_pred CCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhcc----------CCCcceeeeEEec
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIR----------HRNIIKIISCCSI 773 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~----------h~niv~~~~~~~~ 773 (1002)
+...+.||.|+|+.||.++.. +|+++|||++.... ....+.+++|.-....+. |-.++..++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 445688999999999999865 59999999875332 234566666654443322 1111111111111
Q ss_pred Cchh----------hH---HHHHhhccCCCCChhHhhhc---cCC---cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEc
Q 037042 774 GDFK----------AL---FKALALEYMPHGSLEKYLYS---SNY---ILDIFQRLNIMIDVASALEYLYFGYSTPVIHC 834 (1002)
Q Consensus 774 ~~~~----------~~---~~~lv~e~~~~g~L~~~l~~---~~~---~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHr 834 (1002)
...+ .. ..+++|+-+ .++|.+++.. ... .+....+..+..|+.+.+++|| ..||+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEec
Confidence 1000 00 113455655 4488776542 221 2344556777899999999999 9999999
Q ss_pred cCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCC--------CCcCcccchHHHHHHHHHHH
Q 037042 835 DLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE--------GRVSTNGDVYNFGVMLMETF 906 (1002)
Q Consensus 835 Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGv~l~ell 906 (1002)
||||+|++++.+|.++|+||+.....+... .. ...+..|.|||.... -.++.+.|.|++|+++|.|+
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~----~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRY----RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEE----EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCcee----ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 999999999999999999998876554321 11 334567999996433 24789999999999999999
Q ss_pred hCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCC
Q 037042 907 TGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKR 975 (1002)
Q Consensus 907 tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 975 (1002)
+|+.||.....+..... ... ...+.++.+.++|..+++++|++|
T Consensus 245 C~~lPf~~~~~~~~~~~-----------------------~f~--~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW-----------------------DFS--RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG-----------------------GGT--TSS---HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc-----------------------cch--hcCCcCHHHHHHHHHHccCCcccC
Confidence 99999987543322100 000 111467889999999999999988
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.2e-18 Score=173.25 Aligned_cols=141 Identities=15% Similarity=0.224 Sum_probs=107.5
Q ss_pred CCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-----cCCCcceeeeEEecCchhhHHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-----RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
....+.||+|+||.||. ...++.. +||++........+.+.+|+.+++.+ .||||+++++++...........
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34557899999999996 3234444 79988765444567899999999999 57999999999987632111223
Q ss_pred Hhhcc--CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHH-HHHHcCCCCCcEEccCCCCCeeeCC----CCcEEEeccc
Q 037042 783 LALEY--MPHGSLEKYLYSSNYILDIFQRLNIMIDVASAL-EYLYFGYSTPVIHCDLKPSNVLLGD----NMVAHLSDFG 855 (1002)
Q Consensus 783 lv~e~--~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l-~~LH~~~~~~iiHrDlkp~NILl~~----~~~~kl~DfG 855 (1002)
+|+|| +++|+|.+++.+.. +++. ..++.+++.++ +||| +.+|+||||||+|||++. ++.++|+||+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 78999 66899999997642 4544 35677777777 9999 999999999999999974 3489999955
Q ss_pred cc
Q 037042 856 IT 857 (1002)
Q Consensus 856 la 857 (1002)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 44
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-17 Score=197.63 Aligned_cols=198 Identities=24% Similarity=0.283 Sum_probs=153.8
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc---CCCcceeeeEEecCchhhH
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR---HRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~ 779 (1002)
...+.|.+.+.||+|+||.||+|...+|+.||+|+-++...- +|..=.+++.+++ -+-|..+..++...+
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~---- 767 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQN---- 767 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCC----
Confidence 345678888999999999999999888999999997655322 1222223344444 133444443333333
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-------CCCcEEEe
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-------DNMVAHLS 852 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-------~~~~~kl~ 852 (1002)
.-++|+||.+.|+|.+++...+ ..++.-+..+..|+++.+++|| ..+|||+||||+|.++. +...++|+
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~~-~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTNK-VMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred cceeeeeccccccHHHhhccCC-CCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEE
Confidence 2358999999999999998554 5899999999999999999999 99999999999999994 24569999
Q ss_pred cccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCC
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P 911 (1002)
|||.+-.+.--....+....++|..+-.+|+..+..++.++|-|.+..+++.|+.|+.-
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99999776433222344566788899999999999999999999999999999999754
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.5e-17 Score=169.24 Aligned_cols=143 Identities=18% Similarity=0.170 Sum_probs=111.4
Q ss_pred cCCCCCceeeccCcceEEEEE--eCCCcEEEEEEeecccch------------------------hHHHHHHHHHHHHhc
Q 037042 706 DGFSENNLIGRGGFGSVYKAR--IQDGMEVAVKVFNQQCGR------------------------AFKSFDVECEVMKSI 759 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 759 (1002)
..|++.+.||+|+||.||+|. ..+|+.||||+++..... ....++.|++.++++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999998 568999999998743210 112356899999999
Q ss_pred cCC--CcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC-cEEccC
Q 037042 760 RHR--NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP-VIHCDL 836 (1002)
Q Consensus 760 ~h~--niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-iiHrDl 836 (1002)
.+. .+.+++++ .. .++||||++++++........ .........++.||+.+++||| ..+ |+||||
T Consensus 108 ~~~~i~~p~~~~~---~~-----~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Di 175 (237)
T smart00090 108 YEAGVPVPKPIAW---RR-----NVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLY---KEGELVHGDL 175 (237)
T ss_pred HhcCCCCCeeeEe---cC-----ceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCC
Confidence 753 34444443 11 269999999988876653322 3555667889999999999999 888 999999
Q ss_pred CCCCeeeCCCCcEEEeccccccccc
Q 037042 837 KPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 837 kp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
||+||+++ ++.++|+|||.|....
T Consensus 176 kp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 176 SEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred ChhhEEEE-CCCEEEEEChhhhccC
Confidence 99999999 8899999999987544
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-16 Score=191.41 Aligned_cols=157 Identities=29% Similarity=0.517 Sum_probs=127.8
Q ss_pred CCCChhHHHHHHHHHHhccCCCCCccccCCCCCCCCC----cccccEeeCC--C--CcEEEEEeCCCCCccccCcccCCC
Q 037042 5 TSNITTDLDALHALKTHITNDPTNFFAKNWNSSISFC----NWTGVTCDVH--S--HRVTALNISHLSLSGTIPSRLGNL 76 (1002)
Q Consensus 5 ~~~~~~~~~~l~~~k~~~~~~~~~~~~~~w~~~~~~c----~w~gv~c~~~--~--~~v~~L~l~~~~l~~~~p~~l~~l 76 (1002)
+.+.+.|.+||+++|+++. +|.. .+|.++ .|| .|.||.|+.. + .+|+.|+|++|++.|.+|..++.|
T Consensus 367 ~~t~~~~~~aL~~~k~~~~-~~~~---~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L 441 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLG-LPLR---FGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKL 441 (623)
T ss_pred cccCchHHHHHHHHHHhcC-Cccc---CCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCC
Confidence 4556789999999999985 4443 379753 332 7999999632 2 259999999999999999999999
Q ss_pred CCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCC-CCCceE
Q 037042 77 SSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNC-TYLRIL 155 (1002)
Q Consensus 77 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L 155 (1002)
++|+.|+|++|.++|.+|..++.+++|++|+|++|+++|.+|..+ +++++|++|+|++|+++|.+|..++.+ .++..+
T Consensus 442 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l-~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l 520 (623)
T PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESL-GQLTSLRILNLNGNSLSGRVPAALGGRLLHRASF 520 (623)
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHH-hcCCCCCEEECcCCcccccCChHHhhccccCceE
Confidence 999999999999999999999999999999999999998888776 578888888888888888888887763 466778
Q ss_pred EcccccCCCCCc
Q 037042 156 RLSYNDFAGGIP 167 (1002)
Q Consensus 156 ~Ls~N~l~~~~p 167 (1002)
++++|......|
T Consensus 521 ~~~~N~~lc~~p 532 (623)
T PLN03150 521 NFTDNAGLCGIP 532 (623)
T ss_pred EecCCccccCCC
Confidence 888776543333
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-17 Score=181.96 Aligned_cols=176 Identities=26% Similarity=0.375 Sum_probs=134.2
Q ss_pred HHHHhhccCCCCChhHhhhccC--CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSN--YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
+.++.|++|...+|.+++.+.. ...++.....++.|++.|++| ++.+|||+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 5789999999999999996443 367788889999999999998 67899999999999999999999999999
Q ss_pred ccccCCC----ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhh
Q 037042 858 KLLTRED----QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 858 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
..+.... .....+...||..||+||.+.+..|+.|+||||+|++++|++. -..+++.. .
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~----------------~ 467 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI----------------A 467 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH----------------H
Confidence 8776554 2334467789999999999999999999999999999999998 33333221 0
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
....+.|+.+. +.+.. ..+.-..++.+++.+.|.+||++.++..+
T Consensus 468 t~~d~r~g~ip-~~~~~------d~p~e~~ll~~lls~~p~~RP~~~~~~~~ 512 (516)
T KOG1033|consen 468 TLTDIRDGIIP-PEFLQ------DYPEEYTLLQQLLSPSPEERPSAIEVALH 512 (516)
T ss_pred hhhhhhcCCCC-hHHhh------cCcHHHHHHHHhcCCCcccCchHHHHhhh
Confidence 12233333222 11111 11233467889999999999966665544
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-16 Score=163.86 Aligned_cols=144 Identities=22% Similarity=0.193 Sum_probs=112.0
Q ss_pred HHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccch----------------------hHHHHHHHHHHHHh
Q 037042 701 LCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR----------------------AFKSFDVECEVMKS 758 (1002)
Q Consensus 701 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~ 758 (1002)
+......|...+.||+|+||.||+|...+|+.||||+++..... .......|+.++.+
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 33333447888999999999999999888999999987643210 11236778999999
Q ss_pred ccCCC--cceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccC
Q 037042 759 IRHRN--IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDL 836 (1002)
Q Consensus 759 l~h~n--iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDl 836 (1002)
+.|++ +++.++. . ..++||||+++++|.+.... .....++.++++++.++| ..+|+||||
T Consensus 90 l~~~~i~v~~~~~~---~-----~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl 151 (198)
T cd05144 90 LYEEGFPVPKPIDW---N-----RHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY---KHGIIHGDL 151 (198)
T ss_pred HHHcCCCCCceeec---C-----CceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH---HCCCCcCCC
Confidence 98874 4444432 1 23799999999999776431 234578899999999999 899999999
Q ss_pred CCCCeeeCCCCcEEEecccccccccC
Q 037042 837 KPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 837 kp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||+||++++++.++|+|||++.....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCCC
Confidence 99999999999999999999976554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.4e-17 Score=190.60 Aligned_cols=210 Identities=23% Similarity=0.300 Sum_probs=143.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
..+|..++.|-.|+||.||.++.+ ..+.+|+|+ +++.- +.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee------------------
Confidence 467999999999999999999866 466788854 32211 1110 33333344443
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+-...+...+. ++. +.+.|++|+| +.+|+|||+||+|.+|+.-|.+|++|||+++.....
T Consensus 136 -------gDc~tllk~~g~-lPv--------dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 -------GDCATLLKNIGP-LPV--------DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred -------chhhhhcccCCC-Ccc--------hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 233333332221 222 2278999999 999999999999999999999999999998643211
Q ss_pred Cc------------e-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 864 DQ------------F-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 864 ~~------------~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
.. . ......+||+.|+|||++....|+..+|.|++|+++||.+-|+.||....+++. +.+
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel-fg~------ 269 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQ------ 269 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH-Hhh------
Confidence 00 0 011345799999999999999999999999999999999999999987544321 111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN 977 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 977 (1002)
++.....+.+. .+..+.+..+++.+.++.+|..|--
T Consensus 270 ------visd~i~wpE~-----dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 270 ------VISDDIEWPEE-----DEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred ------hhhhhcccccc-----CcCCCHHHHHHHHHHHHhChHhhcc
Confidence 22212222211 1233467889999999999999974
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.7e-16 Score=162.88 Aligned_cols=134 Identities=22% Similarity=0.296 Sum_probs=110.1
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccch--------hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR--------AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
+.||+|++|.||+|.+ +|..|++|+....... ....+.+|++++..+.|++|+....++...+ ..++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~----~~~l 76 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE----NFII 76 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC----CCEE
Confidence 5799999999999987 5778999986532211 1245778999999999998877666654444 3468
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
||||++|++|.+++.... . .+..++.+++.++.++| ..+++|||++|.||+++ ++.++++|||.+..
T Consensus 77 v~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 77 VMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999999986532 2 77899999999999999 89999999999999999 78999999998864
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.2e-16 Score=182.97 Aligned_cols=138 Identities=18% Similarity=0.225 Sum_probs=109.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEe-ecc-c------chhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVF-NQQ-C------GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~-~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
...|...+.||+|+||+||+|.+.+. .+++|+. .+. . ....+.+.+|++++++++|++++..+.++....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~- 409 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE- 409 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC-
Confidence 34556778999999999999987644 3444432 221 1 112356788999999999999988777666544
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++||||+++++|.+++. ....++.++++++.||| +.+|+|||+||+||++ +++.++|+|||+
T Consensus 410 ---~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGl 473 (535)
T PRK09605 410 ---EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGL 473 (535)
T ss_pred ---CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcc
Confidence 3469999999999999875 34678999999999999 8999999999999999 678999999999
Q ss_pred cccc
Q 037042 857 TKLL 860 (1002)
Q Consensus 857 a~~~ 860 (1002)
++..
T Consensus 474 a~~~ 477 (535)
T PRK09605 474 GKYS 477 (535)
T ss_pred cccC
Confidence 8753
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.8e-16 Score=159.77 Aligned_cols=131 Identities=19% Similarity=0.278 Sum_probs=103.5
Q ss_pred eeeccCcceEEEEEeCCCcEEEEEEeeccc---c-----hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 713 LIGRGGFGSVYKARIQDGMEVAVKVFNQQC---G-----RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 713 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.||+|+||+||+|.+ +|..|++|+..... . .....+.+|+++++.++|+++.....++...+ ..++|
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~----~~~lv 75 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD----NKTIV 75 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC----CCEEE
Confidence 389999999999985 47889999865321 1 11355778999999999886554444433333 34699
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|||++|++|.+++..... .++.+++++++++| ..+++|||++|.||+++ ++.++++|||+++..
T Consensus 76 ~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 76 MEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999999999988754321 78999999999999 99999999999999999 899999999998653
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-16 Score=186.34 Aligned_cols=259 Identities=20% Similarity=0.228 Sum_probs=197.0
Q ss_pred cCCCCCceeeccCcceEEEEEeC--CCcEEEEEEeecc--cchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ--DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 780 (1002)
..|...+.||+|+|+.|-..... ....+|+|.+... ..........|..+-+.+. |+|++++++.....+ .
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~----~ 95 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR----S 95 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCc----c
Confidence 45777788999999999888643 3455777766533 2334455666888877776 999999999887776 6
Q ss_pred HHHhhccCCCCChhHhh-hccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEecccccc
Q 037042 781 KALALEYMPHGSLEKYL-YSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITK 858 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l-~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~ 858 (1002)
.++++||.++|++.+-+ +......+......+..|+..++.|+|. ..++.|||+||+|.+++..+ ..+++|||+|.
T Consensus 96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhc
Confidence 78999999999999988 5544245666777899999999999995 67899999999999999999 99999999998
Q ss_pred cccC-CCceeeeccCCC-CcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 859 LLTR-EDQFVTQTQTPA-TIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 859 ~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
.+.. ..........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..||.........+..|.......
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--- 250 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRF--- 250 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccccc---
Confidence 8766 443334455677 9999999988774 457889999999999999999999988766554444443321000
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.............++..+++..+|..|.+.+++-..=+
T Consensus 251 -------------~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~ 288 (601)
T KOG0590|consen 251 -------------TQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNW 288 (601)
T ss_pred -------------ccCccccCChhhhhcccccccCCchhcccccccccccc
Confidence 00111223456778889999999999999988866544
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.4e-15 Score=150.92 Aligned_cols=137 Identities=21% Similarity=0.232 Sum_probs=98.9
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccch--hHHH----------------------HHHHHHHHHhccCC--Cc
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR--AFKS----------------------FDVECEVMKSIRHR--NI 764 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~--ni 764 (1002)
.+.||+|+||+||+|+..+|+.||||+++..... .... ...|.+.+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999778999999998753211 1111 13566666666543 34
Q ss_pred ceeeeEEecCchhhHHHHHhhccCCCCChhH-hhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCee
Q 037042 765 IKIISCCSIGDFKALFKALALEYMPHGSLEK-YLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVL 842 (1002)
Q Consensus 765 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NIL 842 (1002)
.+.+++. ..++||||++++.+.. .+.... .. .....++.+++.++.++| . .+|+||||||+||+
T Consensus 82 ~~~~~~~--------~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nil 147 (187)
T cd05119 82 PKPIDLN--------RHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNIL 147 (187)
T ss_pred CceEecC--------CCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEE
Confidence 4554432 2369999999954422 111111 11 556789999999999999 7 99999999999999
Q ss_pred eCCCCcEEEecccccccccC
Q 037042 843 LGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 843 l~~~~~~kl~DfGla~~~~~ 862 (1002)
++ ++.++++|||.+.....
T Consensus 148 i~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 148 VD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred EE-CCcEEEEECcccccccC
Confidence 99 89999999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.6e-14 Score=140.25 Aligned_cols=135 Identities=17% Similarity=0.213 Sum_probs=112.5
Q ss_pred CCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccC--CCcceeeeEEecCchhhHHHHHhhcc
Q 037042 710 ENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH--RNIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
+.+.||+|.++.||+++..+ ..+++|+...... ...+..|+.+++.++| ..+++++++....+ ..++++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~----~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDG----WSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----ccEEEEEe
Confidence 35789999999999999764 7899999865533 4678899999999976 58999988776554 56899999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
++++.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.++.
T Consensus 75 ~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 999877654 4556678899999999999954446899999999999999999999999998864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.51 E-value=5e-14 Score=148.24 Aligned_cols=138 Identities=16% Similarity=0.191 Sum_probs=105.7
Q ss_pred ceee-ccCcceEEEEEeCCCcEEEEEEeeccc-------------chhHHHHHHHHHHHHhccCCCc--ceeeeEEecCc
Q 037042 712 NLIG-RGGFGSVYKARIQDGMEVAVKVFNQQC-------------GRAFKSFDVECEVMKSIRHRNI--IKIISCCSIGD 775 (1002)
Q Consensus 712 ~~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~~ 775 (1002)
..|| .|+.|+||++... +..+|||++.... ......+.+|++++.+++|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5688 8999999999875 7789999875311 1123567889999999998775 67777654432
Q ss_pred hhhHHHHHhhccCCC-CChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 776 FKALFKALALEYMPH-GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
......++||||++| .+|.+++... .++.. .+.+|++++.+|| ..||+||||||.|||++.++.++|+||
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDf 186 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDF 186 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEEC
Confidence 211122499999997 6898888653 24433 3678999999999 999999999999999999899999999
Q ss_pred ccccc
Q 037042 855 GITKL 859 (1002)
Q Consensus 855 Gla~~ 859 (1002)
|.+..
T Consensus 187 g~~~~ 191 (239)
T PRK01723 187 DRGEL 191 (239)
T ss_pred CCccc
Confidence 98864
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.6e-16 Score=167.79 Aligned_cols=171 Identities=30% Similarity=0.501 Sum_probs=149.6
Q ss_pred EEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCC
Q 037042 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLS 134 (1002)
Q Consensus 55 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls 134 (1002)
.+..||+.|.++ ++|.....+..|+.|.|..|.+. .+|.++.++..|++|||+.|+++ .+|..+|. || |+.|-++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~-lp-Lkvli~s 151 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCD-LP-LKVLIVS 151 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhc-Cc-ceeEEEe
Confidence 456788899998 88999999999999999999998 89999999999999999999998 88888872 44 8999999
Q ss_pred CCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCC
Q 037042 135 KNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214 (1002)
Q Consensus 135 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 214 (1002)
+|+++ .+|..++.+..|..||.|.|++. .+|..+++|.+|+.|.+..|++. .
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~--------------------------~ 203 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE--------------------------D 203 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh--------------------------h
Confidence 99998 88888999999999999999998 78888999999999999999987 5
Q ss_pred CCccccCccccceeeccCcccccccccccccccccceeecccCCCc
Q 037042 215 IPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260 (1002)
Q Consensus 215 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 260 (1002)
+|.++. .-.|..||+++|+++ .+|..|..|+.|++|-|.+|.|.
T Consensus 204 lp~El~-~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 204 LPEELC-SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred CCHHHh-CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 777777 445889999999998 67989998888888888888876
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.2e-14 Score=167.44 Aligned_cols=118 Identities=36% Similarity=0.578 Sum_probs=98.5
Q ss_pred cceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCC
Q 037042 520 VLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLS 599 (1002)
Q Consensus 520 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 599 (1002)
.++.|+|++|.++|.+|..++.+++|+.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47888999999998899999999999999999999998899889999999999999999999999999999999999999
Q ss_pred CCcCcccCCCCC--CCCCCccccccCCCCCCCCCCCCCCCCC
Q 037042 600 FNKLEGEIPKGG--SFGNFSAESFEGNKLLCGSPNLHVPPCK 639 (1002)
Q Consensus 600 ~N~l~~~~p~~~--~~~~~~~~~~~~n~~~c~~~~~~~~pc~ 639 (1002)
+|+++|.+|..- .........+.+|+.+|+.|. ..+|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC--CCCCc
Confidence 999999998641 122334567889999999764 34664
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.6e-15 Score=163.71 Aligned_cols=181 Identities=30% Similarity=0.509 Sum_probs=121.6
Q ss_pred cccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccce
Q 037042 99 NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEE 178 (1002)
Q Consensus 99 ~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 178 (1002)
.+..-...||+.|+++ ++|..++ .+-.|+.|.|.+|.|. .+|..+.++..|.+|||+.|+++ .+|..+..|+ |+.
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~-~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEAC-AFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHH-HHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 3444445555555555 5555553 3555666666666666 67777777777777777777776 6666666654 677
Q ss_pred eeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCC
Q 037042 179 LYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNS 258 (1002)
Q Consensus 179 L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 258 (1002)
|.+++|+++ .+|.+++.+..|..||.+.|.+. .+|..++++.+|
T Consensus 148 li~sNNkl~--------------------------~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~sl--------- 191 (722)
T KOG0532|consen 148 LIVSNNKLT--------------------------SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSL--------- 191 (722)
T ss_pred EEEecCccc--------------------------cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHH---------
Confidence 777777776 46777777777777777777776 345555554444
Q ss_pred CccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhh
Q 037042 259 LSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLE 338 (1002)
Q Consensus 259 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~ 338 (1002)
+.|.+..|++. .+|..+.. -.|.+||++.|+|+ .+|-.|.+|+.|++|-|.+|.+++-|.+
T Consensus 192 ----------------r~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPAq 252 (722)
T KOG0532|consen 192 ----------------RDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPAQ 252 (722)
T ss_pred ----------------HHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChHH
Confidence 44444444444 34555553 35788888888888 6788888999999999999998888877
Q ss_pred h
Q 037042 339 L 339 (1002)
Q Consensus 339 ~ 339 (1002)
+
T Consensus 253 I 253 (722)
T KOG0532|consen 253 I 253 (722)
T ss_pred H
Confidence 6
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.40 E-value=2e-13 Score=156.84 Aligned_cols=201 Identities=33% Similarity=0.453 Sum_probs=141.0
Q ss_pred EEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCC-CCCEEeCCCCcccccCCccccCCCCCceEEccc
Q 037042 81 SLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLP-FFESLNLSKNMFHGGIPSALSNCTYLRILRLSY 159 (1002)
Q Consensus 81 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 159 (1002)
.|+++.|.+. ..+..+..++.++.|++.+|.++ .||... ..++ +|+.|++++|++. .+|..++++++|+.|++++
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~-~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLI-GLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCcccc-ccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 5777777775 33445556677788888888877 566655 2342 7888888888887 6666778888888888888
Q ss_pred ccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccccc
Q 037042 160 NDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVI 239 (1002)
Q Consensus 160 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 239 (1002)
|+++ .+|...+.+++|+.|++++|+++ .+|..++.+..|++|.+++|++. ..
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~--------------------------~l~~~~~~~~~L~~l~~~~N~~~-~~ 224 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS--------------------------DLPPEIELLSALEELDLSNNSII-EL 224 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc--------------------------cCchhhhhhhhhhhhhhcCCcce-ec
Confidence 8887 66666667788888888888877 45665566666778888877543 35
Q ss_pred ccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccc
Q 037042 240 PAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFG 317 (1002)
Q Consensus 240 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 317 (1002)
+..+.++.++..+.+.+|++...+ .....++++++|++++|.++. ++. ++.+.+++.|++++|.+....|....
T Consensus 225 ~~~~~~~~~l~~l~l~~n~~~~~~--~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 225 LSSLSNLKNLSGLELSNNKLEDLP--ESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred chhhhhcccccccccCCceeeecc--chhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchhhhc
Confidence 666777777777777777765321 223466778888888888874 333 77788888888888888766655443
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.38 E-value=7e-13 Score=151.84 Aligned_cols=143 Identities=20% Similarity=0.240 Sum_probs=99.7
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccchhH----------------------------------------HHHH
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAF----------------------------------------KSFD 750 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 750 (1002)
.+.||.|++|.||+|+.++|+.||||+.++...... -.+.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 368999999999999999999999999865421110 0233
Q ss_pred HHHHHHHhcc----CCCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHH-HHHHHHc
Q 037042 751 VECEVMKSIR----HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVAS-ALEYLYF 825 (1002)
Q Consensus 751 ~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~-~l~~LH~ 825 (1002)
+|.+.+.+++ |.+-+.+-.++.+.. ...++||||++|+++.++........ .+..++..++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~---~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~- 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRT---SERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVL- 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhc---CCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHH-
Confidence 4555555542 322233322222111 12479999999999988765432212 23456776666 467788
Q ss_pred CCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 826 ~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
..|++|+|+||.||+++.++.++++|||++..+.+
T Consensus 275 --~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 275 --RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred --hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 89999999999999999999999999999987754
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.3e-13 Score=153.30 Aligned_cols=275 Identities=32% Similarity=0.358 Sum_probs=197.1
Q ss_pred CcccccEeeCCCCcEE---EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCccccccc-CCcEEEecccccccc
Q 037042 41 CNWTGVTCDVHSHRVT---ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIH-TLKLLSFGDNQLSGE 116 (1002)
Q Consensus 41 c~w~gv~c~~~~~~v~---~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~ 116 (1002)
+.+.+..+.... +. .++++.+.+.. -+..+..++.++.|++.+|.++ .+|.....++ +|+.|++++|++. .
T Consensus 80 ~~~l~~~~~~~~--~~~~~~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~ 154 (394)
T COG4886 80 ISSLDGSENLLN--LLPLPSLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-S 154 (394)
T ss_pred cccccccccccC--CCCCceeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-h
Confidence 566666665432 23 57888888753 3455667799999999999999 8888888885 9999999999998 6
Q ss_pred cCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhH
Q 037042 117 IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQ 196 (1002)
Q Consensus 117 ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 196 (1002)
+|..+ ..+++|+.|++++|+++ .+|...+.+++|+.|++++|+++ .+|..+..+..|++|++++|++.
T Consensus 155 l~~~~-~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~--------- 222 (394)
T COG4886 155 LPSPL-RNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII--------- 222 (394)
T ss_pred hhhhh-hccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce---------
Confidence 66444 57999999999999999 77777779999999999999998 88887777888999999999643
Q ss_pred HhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccch
Q 037042 197 IFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEE 276 (1002)
Q Consensus 197 ~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 276 (1002)
.++..+.++.++..|.+.+|++.. ++..+..++++++|++++|.++. ++. +..+.++++
T Consensus 223 -----------------~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~-i~~--~~~~~~l~~ 281 (394)
T COG4886 223 -----------------ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISS-ISS--LGSLTNLRE 281 (394)
T ss_pred -----------------ecchhhhhcccccccccCCceeee-ccchhccccccceeccccccccc-ccc--ccccCccCE
Confidence 466778888889999999998874 37778888889999999998873 332 567789999
Q ss_pred hhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeC
Q 037042 277 LYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDL 356 (1002)
Q Consensus 277 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~L 356 (1002)
|++++|.+...+|.......... +... +.+. ..+..+.....+....+..+.....+.. +.....+..++.
T Consensus 282 L~~s~n~~~~~~~~~~~~~~~~~-~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 352 (394)
T COG4886 282 LDLSGNSLSNALPLIALLLLLLE-LLLN-LLLT-LKALELKLNSILLNNNILSNGETSSPEA------LSILESLNNLWT 352 (394)
T ss_pred EeccCccccccchhhhccchhHH-hhhh-hhhh-cccccccccccccccccccccccccchh------hcccccccCcee
Confidence 99999999876665443322211 1111 2222 2223333344455555555555555433 233344444555
Q ss_pred CCCCCC
Q 037042 357 SSNSID 362 (1002)
Q Consensus 357 s~N~l~ 362 (1002)
..+...
T Consensus 353 ~~~~~~ 358 (394)
T COG4886 353 LDNALD 358 (394)
T ss_pred cccccc
Confidence 554443
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-12 Score=133.78 Aligned_cols=214 Identities=17% Similarity=0.236 Sum_probs=145.0
Q ss_pred HHHHHHhccCCCcceeeeEEecCch-hhHHHHHhhccCCCCChhHhhhccCC---cCCHHHHHHHHHHHHHHHHHHHcCC
Q 037042 752 ECEVMKSIRHRNIIKIISCCSIGDF-KALFKALALEYMPHGSLEKYLYSSNY---ILDIFQRLNIMIDVASALEYLYFGY 827 (1002)
Q Consensus 752 E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~---~l~~~~~~~i~~~ia~~l~~LH~~~ 827 (1002)
-++-+-++.|-|||++..|+.+... ......+++|||..|++..++++.++ .+......++..||..||.|||. +
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~ 195 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-C 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-c
Confidence 3444555679999999999876543 22344578999999999999987543 57777788999999999999995 4
Q ss_pred CCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC--ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHH
Q 037042 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED--QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMET 905 (1002)
Q Consensus 828 ~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el 905 (1002)
.++|+|+++..+-|++..+|-+||.--.-........ .........+-++|.|||.-.....+.++|||+||+...||
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 7999999999999999999999985322111000000 00001122356779999987777778899999999999999
Q ss_pred HhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 906 FTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 906 ltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..|..-......... . .+.+..++ .....+ .=.+.+.+|++..|..||+|.+++.|.
T Consensus 276 ailEiq~tnseS~~~-~--------ee~ia~~i---~~len~-----------lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 276 AILEIQSTNSESKVE-V--------EENIANVI---IGLENG-----------LQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HHheeccCCCcceee-h--------hhhhhhhe---eeccCc-----------cccCcCcccccCCCCCCcchhhhhcCc
Confidence 988765322111000 0 00011110 001111 112567899999999999999999886
Q ss_pred Hhhc
Q 037042 986 LKIN 989 (1002)
Q Consensus 986 ~~i~ 989 (1002)
-.+.
T Consensus 333 llfe 336 (458)
T KOG1266|consen 333 LLFE 336 (458)
T ss_pred eeee
Confidence 5543
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.8e-12 Score=142.70 Aligned_cols=249 Identities=22% Similarity=0.245 Sum_probs=179.3
Q ss_pred CCCCCceeec--cCcceEEEEEe---CCCcEEEEEEeecc--cchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhh
Q 037042 707 GFSENNLIGR--GGFGSVYKARI---QDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 707 ~~~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 778 (1002)
.|.....+|. |.+|.||.++. .++..+|+|.-+.. .......=.+|+...+.+ .|++.++.+..+..++
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~--- 191 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG--- 191 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC---
Confidence 4666788999 99999999975 36888999973322 112223335577777777 4999999888888777
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHH----HHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEec
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVAS----ALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSD 853 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~----~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~D 853 (1002)
..++-+|++. .++..+.+.....++....+.+..+..+ |+.++| ...++|-|+||.||++..+ ...+++|
T Consensus 192 -~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 192 -ILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred -cceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCC
Confidence 6677889885 6999998877666788888888888888 999999 9999999999999999999 8999999
Q ss_pred ccccccccCCCceee---eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 854 FGITKLLTREDQFVT---QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 854 fGla~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
||+...+....-... .....|...|++||... +-++...|+|++|.+..|-.+|..++...... .|.
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-----~W~---- 336 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS-----SWS---- 336 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC-----Ccc----
Confidence 999988876542111 12225677899999854 56799999999999999999987765432111 111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
++....+. .+.. +.-...+...+..|+..+|..|++++++..+
T Consensus 337 -----~~r~~~ip-~e~~-----~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 337 -----QLRQGYIP-LEFC-----EGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred -----ccccccCc-hhhh-----cCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 11000100 0000 0112334447888999999999998877654
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-11 Score=142.36 Aligned_cols=147 Identities=19% Similarity=0.214 Sum_probs=93.0
Q ss_pred cCCCCCceeeccCcceEEEEEeCC-CcEEEEEEeecccchh----------------------------------HHH--
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRA----------------------------------FKS-- 748 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~~~-- 748 (1002)
..|+. +.||+|++|.||+|+.++ |+.||||+.++..... .+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 789999999999999877 9999999997542110 111
Q ss_pred ----HHHHHHHHHhcc----CCCcceeeeEEecCchhhHHHHHhhccCCCCChhHhh--hccCCcCCHHHHHHHHHHHHH
Q 037042 749 ----FDVECEVMKSIR----HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYL--YSSNYILDIFQRLNIMIDVAS 818 (1002)
Q Consensus 749 ----~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~l~~~~~~~i~~~ia~ 818 (1002)
+.+|+..+.+++ +...+.+-.++.+-. ...++||||++|+.+.++- ...+ .+.. .++...++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s---t~~VLvmE~i~G~~l~d~~~l~~~g--~d~~---~la~~~v~ 270 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC---SETVMVMERMYGIPVSDVAALRAAG--TDMK---LLAERGVE 270 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccC---CCceEEEeeecCccHHhHHHHHhcC--CCHH---HHHHHHHH
Confidence 233443344432 333333323222110 1346999999999998752 2222 2221 22322222
Q ss_pred HHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEecccccccccCC
Q 037042 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSDFGITKLLTRE 863 (1002)
Q Consensus 819 ~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DfGla~~~~~~ 863 (1002)
+ |+++....|++|+|+||.||+++.++ .+++.|||++..+.+.
T Consensus 271 ~--~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 271 V--FFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred H--HHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 2 22222278999999999999999888 9999999999877553
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.2e-13 Score=137.38 Aligned_cols=193 Identities=20% Similarity=0.204 Sum_probs=92.3
Q ss_pred CCCCCEEeCCCCcccccCCc----cccCCCCCceEEcccccCCCCCc--------------cccccccccceeeeccccc
Q 037042 125 LPFFESLNLSKNMFHGGIPS----ALSNCTYLRILRLSYNDFAGGIP--------------KEIGNLTKLEELYLSFNGL 186 (1002)
Q Consensus 125 l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p--------------~~~~~l~~L~~L~Ls~N~l 186 (1002)
.|+|++||||+|.|.-.-+. .+.+++.|++|.|.+|.+. ..- .-...-++|+.++.++|++
T Consensus 91 ~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrl 169 (382)
T KOG1909|consen 91 CPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRL 169 (382)
T ss_pred CCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccc
Confidence 34555555555555422222 2455666666666666654 111 1123345566666666666
Q ss_pred cccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccc----cccccccccccceeecccCCCccc
Q 037042 187 QGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV----IPAEIFNMSTIQGVGLQNNSLSGS 262 (1002)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ 262 (1002)
..-... .+...|...+.|+.+.+.+|.|... +-..+..++.|+.|||.+|-++..
T Consensus 170 en~ga~---------------------~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~e 228 (382)
T KOG1909|consen 170 ENGGAT---------------------ALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLE 228 (382)
T ss_pred ccccHH---------------------HHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhH
Confidence 532111 1223344455666666666665421 122334444555555555544300
Q ss_pred cCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccc-----cccccchhccccccCccchh
Q 037042 263 LQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFG-----NLRNLKRLGLNNNHLTSLTL 337 (1002)
Q Consensus 263 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~l~~ 337 (1002)
.+ ..+...+..+++|+.|++++|.++.....+|. ..++|++|.|.+|.|+.-..
T Consensus 229 -gs--------------------~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~ 287 (382)
T KOG1909|consen 229 -GS--------------------VALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAA 287 (382)
T ss_pred -HH--------------------HHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHH
Confidence 00 01223334445566666666655544333321 24566666666666654322
Q ss_pred hhhhhcccCCCCCCcEEeCCCCCC
Q 037042 338 ELSFLSSLSNCKYLEFIDLSSNSI 361 (1002)
Q Consensus 338 ~~~~~~~l~~l~~L~~L~Ls~N~l 361 (1002)
.. ...+....+.|+.|+|++|++
T Consensus 288 ~~-la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 288 LA-LAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HH-HHHHHhcchhhHHhcCCcccc
Confidence 11 112234456666666666666
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.6e-11 Score=119.73 Aligned_cols=127 Identities=20% Similarity=0.185 Sum_probs=95.2
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcc-eeeeEEecCchhhHHHHHhhccCC
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNII-KIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
.+.++.|.++.||+++.. ++.|++|+...... ....++.|+.+++.+.+.+++ +++.+.... .++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~------~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPET------GVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCC------CeEEEEecC
Confidence 356889999999999875 77899999765432 223567899999998665544 455443221 258999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC-----cEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP-----VIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
|.++.+.- .....++.+++++++.|| ..+ ++|+|++|.||+++ ++.++++|||.+.
T Consensus 75 G~~l~~~~---------~~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTED---------FSDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCcccccc---------ccCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 98886530 111346789999999999 555 59999999999999 6789999999875
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.6e-12 Score=133.66 Aligned_cols=162 Identities=25% Similarity=0.309 Sum_probs=90.1
Q ss_pred cccCCcEEEecccccccccCc-ccCCCCCCCCEEeCCCCcccc--cCCccccCCCCCceEEcccccCCCCCccc-ccccc
Q 037042 99 NIHTLKLLSFGDNQLSGEIPT-NICSNLPFFESLNLSKNMFHG--GIPSALSNCTYLRILRLSYNDFAGGIPKE-IGNLT 174 (1002)
Q Consensus 99 ~l~~L~~L~L~~N~l~~~ip~-~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~ 174 (1002)
++.+|+...|.+.... .++. .....+++++.||||+|-|+. .+-.....|++|+.|+||.|++.-..... -..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 5667777777776664 2221 344567777777777777663 22233456777777777777775322222 12456
Q ss_pred ccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeec
Q 037042 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGL 254 (1002)
Q Consensus 175 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 254 (1002)
+|+.|.|+.|.|+-. .+-..+..+++|+.|+|..|.....-......+..|++|+|
T Consensus 198 ~lK~L~l~~CGls~k------------------------~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdL 253 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWK------------------------DVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDL 253 (505)
T ss_pred hhheEEeccCCCCHH------------------------HHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccc
Confidence 777777777777621 11122345667777777777533222233334555666666
Q ss_pred ccCCCccccCCccccCCCccchhhccccccc
Q 037042 255 QNNSLSGSLQSIPYVRLPNLEELYLWGNHFS 285 (1002)
Q Consensus 255 ~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 285 (1002)
++|++-..-+-.....++.|+.|.++.+.+.
T Consensus 254 s~N~li~~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 254 SNNNLIDFDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred cCCcccccccccccccccchhhhhccccCcc
Confidence 6666543222222344555555555555554
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.15 E-value=9.3e-12 Score=143.09 Aligned_cols=246 Identities=27% Similarity=0.301 Sum_probs=119.0
Q ss_pred ccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccC
Q 037042 317 GNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIG 396 (1002)
Q Consensus 317 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 396 (1002)
..+..++.+.+..|.|..+. ..+..+++|+.|++..|+|..+.. .+.
T Consensus 69 ~~l~~l~~l~l~~n~i~~~~------~~l~~~~~l~~l~l~~n~i~~i~~---------------------------~l~ 115 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKIL------NHLSKLKSLEALDLYDNKIEKIEN---------------------------LLS 115 (414)
T ss_pred HHhHhHHhhccchhhhhhhh------cccccccceeeeeccccchhhccc---------------------------chh
Confidence 34455555556666555421 124445555555555555554311 033
Q ss_pred CCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCC-ccccCCccCcc
Q 037042 397 NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGDLASLRN 475 (1002)
Q Consensus 397 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~ 475 (1002)
.+++|++|++++|.|+.+. .+..++.|+.|++++|.|+. + ..+..+..|+.+++++|++..+-+ . ...+.+++.
T Consensus 116 ~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~ 190 (414)
T KOG0531|consen 116 SLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISD-I-SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEE 190 (414)
T ss_pred hhhcchheecccccccccc--chhhccchhhheeccCcchh-c-cCCccchhhhcccCCcchhhhhhhhh-hhhccchHH
Confidence 4445555555555554332 23334445555555555542 1 223335556666666666654333 1 345556666
Q ss_pred cccccccccccCCccccccccCceeeccCCCCCCCCcccccccc--cceeeeCCCCccCccCcccccCCccccEEEccCe
Q 037042 476 LSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLK--VLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYN 553 (1002)
Q Consensus 476 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 553 (1002)
+++++|.+..+ ..+..+..+..+++..|.++..-+ +..+. .|+.+++++|.+.. .+..+..+.++..|++++|
T Consensus 191 l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n 265 (414)
T KOG0531|consen 191 LDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSN 265 (414)
T ss_pred HhccCCchhcc--cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhc
Confidence 66666665433 333344444445666666553211 11222 25666666666652 2244555566666666666
Q ss_pred eecccCCcccccccccceeccccccccCC---Cccc-ccCCCccceeeCCCCcCcccC
Q 037042 554 ILQGSIPDSFGDLMSLKSLNLSNNNLSGS---IPVS-LEKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 554 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~-~~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
++...- .+.....+..+.++.|.+... .... ....+.+..+.+.+|+.....
T Consensus 266 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 266 RISNLE--GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred cccccc--cccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccc
Confidence 665321 233444555555555555421 1111 333455555555555555433
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.1e-12 Score=143.60 Aligned_cols=194 Identities=30% Similarity=0.347 Sum_probs=96.1
Q ss_pred CccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCC
Q 037042 272 PNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYL 351 (1002)
Q Consensus 272 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L 351 (1002)
..++.+.+..|.+.. +-..+..+.+|..|++.+|+|..+. ..+..+++|++|+|++|+|+.+. .+..++.|
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i~-------~l~~l~~L 142 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKLE-------GLSTLTLL 142 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcc-cchhhhhcchheecccccccccc-------chhhccch
Confidence 445555566666552 2333455566667777777766442 22556666777777777666653 24455556
Q ss_pred cEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCC-ccccCCCCCCEEEc
Q 037042 352 EFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLYF 430 (1002)
Q Consensus 352 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L 430 (1002)
+.|++++|.|+.+ ..+..++.|+.+++++|++...-+ . ...+.+++.+++
T Consensus 143 ~~L~l~~N~i~~~----------------------------~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l 193 (414)
T KOG0531|consen 143 KELNLSGNLISDI----------------------------SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDL 193 (414)
T ss_pred hhheeccCcchhc----------------------------cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhc
Confidence 6666666655543 223335555555555555553332 1 344555555555
Q ss_pred cCCcccccCCccccCCccccEEEccCCcCCccCCccccCCc--cCcccccccccccccCCccccccccCceeeccCCCCC
Q 037042 431 PDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLA--SLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT 508 (1002)
Q Consensus 431 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 508 (1002)
.+|.+. ....+..+..+..+++..|.++..-+ +..+. .|+.+++++|++... +..+..+..+..|++++|++.
T Consensus 194 ~~n~i~--~i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 194 GGNSIR--EIEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred cCCchh--cccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccccc-cccccccccccccchhhcccc
Confidence 555554 22223333344444555555542211 11112 255555555555432 123333444444444444444
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.3e-11 Score=134.35 Aligned_cols=251 Identities=20% Similarity=0.175 Sum_probs=175.0
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC--CCcEEEEEEeecccchhHHHH--HHHHHHHHhc-cCCCcceeeeEEecCchhh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ--DGMEVAVKVFNQQCGRAFKSF--DVECEVMKSI-RHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 778 (1002)
...+|..+..||.|.|+.|++...+ ++..||+|...+.......++ ..|+-+...+ .|.+++.++..|..-+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r--- 339 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR--- 339 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc---
Confidence 3457888899999999999998643 678899997764432222221 2355555555 5888888877666554
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEeccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFGIT 857 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla 857 (1002)
..++-.|||++++........ ..++...++++..|++.++.++| ++.++|+|+||+||++..+ +.-++.|||.+
T Consensus 340 -~~~ip~e~~~~~s~~l~~~~~-~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 -QGYIPLEFCEGGSSSLRSVTS-QMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred -cccCchhhhcCcchhhhhHHH-HhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccccc
Confidence 345778999999987776322 34778888999999999999999 9999999999999999876 88999999998
Q ss_pred ccccCCCceeeeccCCCCccc-ccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGY-MALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
+.+.-.. .....++..| .+|+......+..++|++|||..+.|.++|..--..... ...
T Consensus 415 t~~~~~~----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~----------------~~~ 474 (524)
T KOG0601|consen 415 TRLAFSS----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ----------------SLT 474 (524)
T ss_pred cccceec----ccccccccccccchhhccccccccccccccccccccccccCcccCccccc----------------cee
Confidence 7532211 1112223334 355555566789999999999999999998765322110 111
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+..+..... .....++..+.+.+...++..||.+.++..+.+..+.
T Consensus 475 i~~~~~p~~--------~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 475 IRSGDTPNL--------PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred eecccccCC--------CchHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 111111111 1122567778888899999999999999888765543
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.7e-11 Score=118.94 Aligned_cols=65 Identities=29% Similarity=0.385 Sum_probs=15.7
Q ss_pred cCccccceeeccCccccccccccc-ccccccceeecccCCCccccCCccccCCCccchhhccccccc
Q 037042 220 GNLRNLEVLALGLNKLVGVIPAEI-FNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS 285 (1002)
Q Consensus 220 ~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 285 (1002)
..+++|++|++++|+|+.+ ++.+ ..+++|+.|+|++|+|...-+-.+...+++|+.|+|.+|.+.
T Consensus 61 ~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 61 PGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp ---TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred cChhhhhhcccCCCCCCcc-ccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 3344555555555555432 1122 234444444444444431111112223444444444444443
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.3e-11 Score=124.66 Aligned_cols=139 Identities=22% Similarity=0.217 Sum_probs=108.3
Q ss_pred ccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCcc
Q 037042 465 ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKD 544 (1002)
Q Consensus 465 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 544 (1002)
........|+++|||+|.|+. +.+...-+++++.|++|+|.++.+ ..+..+.+|+.||||+|.++. +-.+-..+-+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~~-iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLITQ-IDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchhh-hhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcC
Confidence 344455678899999998875 456667788899999999998843 347888999999999999874 3455556788
Q ss_pred ccEEEccCeeecccCCcccccccccceeccccccccCCC-cccccCCCccceeeCCCCcCcccCCC
Q 037042 545 LQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI-PVSLEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 545 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
.+.|.|+.|.|.. -..++.|-+|..||+++|+|.... -..+++++-|+.+.|.+|++.+.+-.
T Consensus 354 IKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 354 IKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred EeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 9999999999873 245778889999999999998432 24678899999999999999875543
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.10 E-value=5e-11 Score=117.00 Aligned_cols=110 Identities=29% Similarity=0.369 Sum_probs=42.3
Q ss_pred cCCCCCCCEEEcccCCCCCCCCcccc-cccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccc-cCCC
Q 037042 73 LGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSAL-SNCT 150 (1002)
Q Consensus 73 l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~ 150 (1002)
+.+..++++|+|++|.|+ .|. .++ .+.+|+.|||++|+|+ .++. +..++.|++|+|++|+|+ .+++.+ ..++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~~--l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp 88 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLEG--LPGLPRLKTLDLSNNRIS-SISEGLDKNLP 88 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---TT------TT--EEE--SS----S-CHHHHHH-T
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-cccC--ccChhhhhhcccCCCCCC-ccccchHHhCC
Confidence 445557899999999998 443 455 5788999999999998 4542 457899999999999999 454444 4689
Q ss_pred CCceEEcccccCCCCC-ccccccccccceeeeccccccc
Q 037042 151 YLRILRLSYNDFAGGI-PKEIGNLTKLEELYLSFNGLQG 188 (1002)
Q Consensus 151 ~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~ 188 (1002)
+|++|+|++|+|...- -..+..+++|+.|+|.+|.++.
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 9999999999997421 2457788999999999999974
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-11 Score=123.36 Aligned_cols=140 Identities=22% Similarity=0.325 Sum_probs=99.2
Q ss_pred CCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccc
Q 037042 215 IPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294 (1002)
Q Consensus 215 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 294 (1002)
.-..+...+.|+.||||+|.|+ .+.++..-+++++.|++|+|.+. .+++ ...+++|+.||||+|.++ .+..+-..
T Consensus 276 ~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n--La~L~~L~~LDLS~N~Ls-~~~Gwh~K 350 (490)
T KOG1259|consen 276 ALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN--LAELPQLQLLDLSGNLLA-ECVGWHLK 350 (490)
T ss_pred eEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh--hhhcccceEeecccchhH-hhhhhHhh
Confidence 3344555677889999999887 45666777778888888888876 3333 345678888888888877 45555556
Q ss_pred cCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcc
Q 037042 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGIL 365 (1002)
Q Consensus 295 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 365 (1002)
+-++++|.|+.|.|... +.++.+-+|..||+++|+|..+.. ....++++-|+.+.|.+|.|.++.
T Consensus 351 LGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~lde----V~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 351 LGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDE----VNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHH----hcccccccHHHHHhhcCCCccccc
Confidence 77788888888877644 456777777888888888777653 245677777777777777776654
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.4e-10 Score=124.84 Aligned_cols=170 Identities=17% Similarity=0.172 Sum_probs=127.8
Q ss_pred EeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCC
Q 037042 726 RIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD 805 (1002)
Q Consensus 726 ~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~ 805 (1002)
+..++.+|.|.+.+...........+-+..++.++||+|++++..+...+ ..|+|+|.+. .|..++... .
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~----~~ylvTErV~--Pl~~~lk~l----~ 102 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG----TLYLVTERVR--PLETVLKEL----G 102 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC----ceEEEeeccc--cHHHHHHHh----H
Confidence 35578899999887665555677888899999999999999999888776 6789999873 566677553 3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccC
Q 037042 806 IFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS 885 (1002)
Q Consensus 806 ~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 885 (1002)
.......+.||+.||.+||+ ..+++|++|.-..|+++..|..||++|-++......... .....--..|..|+.+.
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~--~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP--AKSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc--cccchhhhcccChhhcC
Confidence 55667789999999999985 778999999999999999999999999988654432210 00011111255666433
Q ss_pred CCCcCcccchHHHHHHHHHHHhCCCC
Q 037042 886 EGRVSTNGDVYNFGVMLMETFTGKKP 911 (1002)
Q Consensus 886 ~~~~~~~~DvwSlGv~l~elltg~~P 911 (1002)
... ...|.|-|||+++|++.|..+
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng~~~ 202 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNGSLL 202 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCcccC
Confidence 222 457999999999999999433
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-09 Score=109.81 Aligned_cols=136 Identities=19% Similarity=0.169 Sum_probs=97.7
Q ss_pred ceeeccCcceEEEEEeCC-------CcEEEEEEeecc-------------c---------chhHHHH----HHHHHHHHh
Q 037042 712 NLIGRGGFGSVYKARIQD-------GMEVAVKVFNQQ-------------C---------GRAFKSF----DVECEVMKS 758 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~-------------~---------~~~~~~~----~~E~~~l~~ 758 (1002)
..||.|--+.||.|...+ +..+|||+.+.. . ....+.+ ++|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997542 579999986421 0 0112233 379999999
Q ss_pred ccC--CCcceeeeEEecCchhhHHHHHhhccCCCCChh-HhhhccCCcCCHHHHHHHHHHHHHHHHHH-HcCCCCCcEEc
Q 037042 759 IRH--RNIIKIISCCSIGDFKALFKALALEYMPHGSLE-KYLYSSNYILDIFQRLNIMIDVASALEYL-YFGYSTPVIHC 834 (1002)
Q Consensus 759 l~h--~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~~~iiHr 834 (1002)
+.. -++.+.+++. . .++||||+.++.+. ..+... .++..+...+..+++.++.++ | ..+|||+
T Consensus 83 l~~~Gv~vP~pi~~~--~------~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~H---~~glVHG 149 (197)
T cd05146 83 MQKAGIPCPEVVVLK--K------HVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLYK---ECNLVHA 149 (197)
T ss_pred HHHcCCCCCeEEEec--C------CEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 953 5677777642 2 25999999775442 122221 244455667889999999999 7 8899999
Q ss_pred cCCCCCeeeCCCCcEEEeccccccccc
Q 037042 835 DLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 835 Dlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|+++.||+++ ++.+.|+|||.|....
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 9999999996 4689999999886543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=2e-11 Score=126.77 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=162.5
Q ss_pred CcccCCCCCCCEEEcccCCCCCC----CCcccccccCCcEEEeccc---ccccccCcccCCCCCCCCEEeCCCCcccccC
Q 037042 70 PSRLGNLSSLQSLFLHSNQFSGS----IPFSIFNIHTLKLLSFGDN---QLSGEIPTNICSNLPFFESLNLSKNMFHGGI 142 (1002)
Q Consensus 70 p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N---~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~ 142 (1002)
-+.+..+..++.|+||+|.|... +...+.+.++|+.-++|+= ++..+||..+ + .+
T Consensus 23 ~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L--------------~----~l 84 (382)
T KOG1909|consen 23 EEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEAL--------------K----ML 84 (382)
T ss_pred HHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHH--------------H----HH
Confidence 34566677888888888887532 3344555566666666541 1111222221 0 11
Q ss_pred CccccCCCCCceEEcccccCCCCCcc----ccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCcc
Q 037042 143 PSALSNCTYLRILRLSYNDFAGGIPK----EIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE 218 (1002)
Q Consensus 143 p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~ 218 (1002)
-..+..++.|++||||+|.|.-.-+. .+.+++.|++|+|.+|.+.-......-..+... . .-+-
T Consensus 85 ~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l-----~-------~~kk 152 (382)
T KOG1909|consen 85 SKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFEL-----A-------VNKK 152 (382)
T ss_pred HHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHH-----H-------HHhc
Confidence 23466778999999999999754443 356788999999999998632111111111000 0 0112
Q ss_pred ccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccc----cccccccc
Q 037042 219 IGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG----SIPNFIFN 294 (1002)
Q Consensus 219 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~ 294 (1002)
.+.=++|+++..++|++..-....+. ..|...+.|+.+.++.|.|.. .+...+..
T Consensus 153 ~~~~~~Lrv~i~~rNrlen~ga~~~A---------------------~~~~~~~~leevr~~qN~I~~eG~~al~eal~~ 211 (382)
T KOG1909|consen 153 AASKPKLRVFICGRNRLENGGATALA---------------------EAFQSHPTLEEVRLSQNGIRPEGVTALAEALEH 211 (382)
T ss_pred cCCCcceEEEEeeccccccccHHHHH---------------------HHHHhccccceEEEecccccCchhHHHHHHHHh
Confidence 33446788888888887643211111 011223455555555555431 23345678
Q ss_pred cCCCCeeecCCCccCCC----CccccccccccchhccccccCccchhhhhhhccc-CCCCCCcEEeCCCCCCCCccc---
Q 037042 295 ASKLSRLELQKNSFSGF----IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL-SNCKYLEFIDLSSNSIDGILS--- 366 (1002)
Q Consensus 295 l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l-~~l~~L~~L~Ls~N~l~~~~~--- 366 (1002)
+++|+.|||++|-++.. +...+..+++|+.|+++++.++.-... .+...+ ...+.|+.|.+.+|.|+.-..
T Consensus 212 ~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~-a~~~al~~~~p~L~vl~l~gNeIt~da~~~l 290 (382)
T KOG1909|consen 212 CPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAI-AFVDALKESAPSLEVLELAGNEITRDAALAL 290 (382)
T ss_pred CCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHH-HHHHHHhccCCCCceeccCcchhHHHHHHHH
Confidence 89999999999988744 345677889999999999999874332 233333 346899999999999974321
Q ss_pred ccccccccccccEEecCCCCCC
Q 037042 367 RKSVGNLSHSLKIFDMSDCNVS 388 (1002)
Q Consensus 367 ~~~~~~~~~~L~~L~L~~N~l~ 388 (1002)
...+.. .+.|..|+|++|++.
T Consensus 291 a~~~~e-k~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 291 AACMAE-KPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHhc-chhhHHhcCCccccc
Confidence 112233 568999999999994
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.5e-11 Score=127.43 Aligned_cols=164 Identities=26% Similarity=0.260 Sum_probs=89.8
Q ss_pred cccCCCCeeecCCCccCCCCc-cccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccc
Q 037042 293 FNASKLSRLELQKNSFSGFIP-STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371 (1002)
Q Consensus 293 ~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (1002)
.++.+|+...|.+..+..... .....+++++.|||++|-+.....-.. -...+++|+.|+||.|++..-....
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~---i~eqLp~Le~LNls~Nrl~~~~~s~--- 191 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLK---IAEQLPSLENLNLSSNRLSNFISSN--- 191 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHH---HHHhcccchhcccccccccCCcccc---
Confidence 457788888898888763321 356678888888888888877544332 2456788888888888876332111
Q ss_pred cccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCcc-CCccccCCCCCCEEEccCCcccccCCccccCCcccc
Q 037042 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGS-IPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVY 450 (1002)
Q Consensus 372 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 450 (1002)
.+ ..+++|+.|.|+.+.|+-. +-.....+|+|+.|+|..|...+.-......+..|+
T Consensus 192 ---------------~~-------~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~ 249 (505)
T KOG3207|consen 192 ---------------TT-------LLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQ 249 (505)
T ss_pred ---------------ch-------hhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHh
Confidence 10 1234455555555555411 111233455555555555532222222223344555
Q ss_pred EEEccCCcCCccCC--ccccCCccCcccccccccccc
Q 037042 451 QLDLSNNKLSGSIP--ACFGDLASLRNLSLASNELIS 485 (1002)
Q Consensus 451 ~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~ 485 (1002)
.|||++|++.. .+ ...+.++.|+.|+++.+.+..
T Consensus 250 ~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~s 285 (505)
T KOG3207|consen 250 ELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIAS 285 (505)
T ss_pred hccccCCcccc-cccccccccccchhhhhccccCcch
Confidence 55555555542 22 233455555555555555543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-10 Score=136.34 Aligned_cols=250 Identities=22% Similarity=0.255 Sum_probs=168.8
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..+.+.+.+-+-+|+++.++.++-. .|...+.|+..... ....+....+-.+.-..+||-++....-+....
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs---- 877 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRS---- 877 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCC----
Confidence 3456777778888999999988633 35444555433221 111222222333333334566665544322222
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|++|+.++++..-++.... .+....+.....+.++.+||| ...+.|||++|.|++...++..+++|||....
T Consensus 878 P~~L~~~~~~~~~~~Skl~~~~~-~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLHNSGC-LSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSK 953 (1205)
T ss_pred CcchhhHHhccCCchhhhhcCCC-cccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccc
Confidence 34799999999999998887653 444444556667888999999 77799999999999999999999999984321
Q ss_pred ccC---------------------CC--------ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCC
Q 037042 860 LTR---------------------ED--------QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKK 910 (1002)
Q Consensus 860 ~~~---------------------~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~ 910 (1002)
..- .. .........||+.|.|||...+......+|.|+.|++++|.++|.+
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 110 00 0011233568999999999999999999999999999999999999
Q ss_pred CCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH
Q 037042 911 PTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAK 979 (1002)
Q Consensus 911 P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 979 (1002)
||.....+.. +..+..+...+... +.+......+++...+..+|.+|..+.
T Consensus 1034 p~na~tpq~~-------------f~ni~~~~~~~p~g-----~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1034 PFNAETPQQI-------------FENILNRDIPWPEG-----PEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCcchhhh-------------hhccccCCCCCCCC-----ccccChhhhhhhhhhhccCchhccCcc
Confidence 9987654322 22333333333322 334456678888888899999998776
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.3e-09 Score=103.01 Aligned_cols=129 Identities=20% Similarity=0.319 Sum_probs=96.5
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEe-eccc-------chhHHHHHHHHHHHHhccCCC--cceeeeEEecCchhhHHH
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVF-NQQC-------GRAFKSFDVECEVMKSIRHRN--IIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~~-------~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~ 781 (1002)
..+++|+-+.+|.+.+. |.++++|.- ++.- .-......+|++++.+++--. +..++++.. + ..
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~--~----~~ 74 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP--D----NG 74 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC--C----CC
Confidence 35789999999999775 445777753 3210 112355677999999986444 444454433 2 23
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++|||++|..|.+++... ...++..|-.-+.-|| ..+|+|+|+.++||.++.+. +.++|||++..
T Consensus 75 ~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 75 LIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 5999999999999898765 2467778888889999 99999999999999997764 99999999864
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=7.1e-10 Score=135.72 Aligned_cols=131 Identities=31% Similarity=0.362 Sum_probs=97.7
Q ss_pred CCCCCEEEcccCCCCCCCCcccccccCCcEEEeccccc-ccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCce
Q 037042 76 LSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQL-SGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI 154 (1002)
Q Consensus 76 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 154 (1002)
....+...+-+|++. .++.+..+- +|+.|-+..|.- ...++..+|..+|.|++||||+|.=-+.+|.++++|-+||+
T Consensus 522 ~~~~rr~s~~~~~~~-~~~~~~~~~-~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIE-HIAGSSENP-KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchh-hccCCCCCC-ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 366777888888776 455544433 688888888862 23677777888888888888887666688888888888888
Q ss_pred EEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcc
Q 037042 155 LRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK 234 (1002)
Q Consensus 155 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~ 234 (1002)
|+|++..++ .+|..+++|.+|.+|++..+.-.. .+|..+..|++|++|.+..-.
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~-------------------------~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLE-------------------------SIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccc-------------------------cccchhhhcccccEEEeeccc
Confidence 888888887 888888888888888888766432 234555667888888776654
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.8e-09 Score=112.02 Aligned_cols=145 Identities=16% Similarity=0.143 Sum_probs=110.2
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhccC--CCcceeeeEEecCchhhHHHHHhhccC
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRH--RNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
+.+|.|..+.||+++..+|+.+++|+...... .....+..|+++++.+++ ..+.+++.+...... ....++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~-~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV-LGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc-cCCceEEEEEe
Confidence 56899999999999887778999999765422 134578899999999975 446777777654321 11346999999
Q ss_pred CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC-----------------------------------------
Q 037042 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY----------------------------------------- 827 (1002)
Q Consensus 789 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 827 (1002)
+|.++.+.+.. ..++..+...++.++++++.+||...
T Consensus 83 ~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 83 DGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 99988876532 23677777888999999999998421
Q ss_pred ------------CCCcEEccCCCCCeeeCC--CCcEEEeccccccc
Q 037042 828 ------------STPVIHCDLKPSNVLLGD--NMVAHLSDFGITKL 859 (1002)
Q Consensus 828 ------------~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~ 859 (1002)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 67789999997753
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.2e-09 Score=101.20 Aligned_cols=140 Identities=20% Similarity=0.293 Sum_probs=100.6
Q ss_pred CCceeeccCcceEEEEEeCCCcEEEEEE-eeccc-------chhHHHHHHHHHHHHhccCCCcc--eeeeEEecCchhhH
Q 037042 710 ENNLIGRGGFGSVYKARIQDGMEVAVKV-FNQQC-------GRAFKSFDVECEVMKSIRHRNII--KIISCCSIGDFKAL 779 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~-~~~~~-------~~~~~~~~~E~~~l~~l~h~niv--~~~~~~~~~~~~~~ 779 (1002)
....+-+|+-+.|+++.+. |+.+.||. +.+.- .-..+...+|++.+.+++--.|. +++.+-...+
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~---- 85 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGG---- 85 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCC----
Confidence 4578899999999999886 77877774 33221 11345677899999998644433 3333222222
Q ss_pred HHHHhhccCCC-CChhHhhhccCCc-CCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC---cEEEecc
Q 037042 780 FKALALEYMPH-GSLEKYLYSSNYI-LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM---VAHLSDF 854 (1002)
Q Consensus 780 ~~~lv~e~~~~-g~L~~~l~~~~~~-l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~Df 854 (1002)
.++|||++| -++.+++...-.. ........++..|-+.+.-|| ..+|||+|+..+||++..++ .+.++||
T Consensus 86 --~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdf 160 (229)
T KOG3087|consen 86 --QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDF 160 (229)
T ss_pred --eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEee
Confidence 588999977 4778888765432 222333688999999999999 99999999999999996543 4689999
Q ss_pred ccccc
Q 037042 855 GITKL 859 (1002)
Q Consensus 855 Gla~~ 859 (1002)
|++..
T Consensus 161 gls~~ 165 (229)
T KOG3087|consen 161 GLSSV 165 (229)
T ss_pred cchhc
Confidence 99853
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.7e-10 Score=81.30 Aligned_cols=40 Identities=45% Similarity=0.946 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHhccCCCCCccccCCCCC--CCCCcccccEee
Q 037042 9 TTDLDALHALKTHITNDPTNFFAKNWNSS--ISFCNWTGVTCD 49 (1002)
Q Consensus 9 ~~~~~~l~~~k~~~~~~~~~~~~~~w~~~--~~~c~w~gv~c~ 49 (1002)
.+|++||++||+++..+|..+++ +|+.. .+||+|.||+||
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~-~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLS-SWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCT-T--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccc-cCCCcCCCCCeeeccEEeC
Confidence 57999999999999878877664 89987 799999999997
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.6e-09 Score=130.89 Aligned_cols=105 Identities=29% Similarity=0.350 Sum_probs=61.6
Q ss_pred cEEEEEeCCCC--CccccC-cccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCE
Q 037042 54 RVTALNISHLS--LSGTIP-SRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFES 130 (1002)
Q Consensus 54 ~v~~L~l~~~~--l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~ 130 (1002)
.+++|-+..|. +. .++ ..|..++.|++||||+|.=-+.+|.++++|-+|++|+|++..++ .+|.++ .+|..|.+
T Consensus 546 ~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l-~~Lk~L~~ 622 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGL-GNLKKLIY 622 (889)
T ss_pred ccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHH-HHHHhhhe
Confidence 35555555554 33 233 23555666666666666555566666666666666666666666 566665 45666666
Q ss_pred EeCCCCcccccCCccccCCCCCceEEccccc
Q 037042 131 LNLSKNMFHGGIPSALSNCTYLRILRLSYND 161 (1002)
Q Consensus 131 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 161 (1002)
||+..+.....+|..+..+++||+|.|-.-.
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccc
Confidence 6666665444455555556666666665443
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.7e-09 Score=86.12 Aligned_cols=58 Identities=45% Similarity=0.618 Sum_probs=25.9
Q ss_pred CcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEccccc
Q 037042 103 LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYND 161 (1002)
Q Consensus 103 L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 161 (1002)
|++|++++|+|+ .+|...|.++++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 3 L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 444444444444 3444444444444444444444443334444444444444444443
|
... |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.4e-09 Score=85.56 Aligned_cols=61 Identities=39% Similarity=0.453 Sum_probs=57.0
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccc
Q 037042 126 PFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGL 186 (1002)
Q Consensus 126 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 186 (1002)
|+|++|++++|+|+...+..|.++++|++|++++|.++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999977778999999999999999999988888999999999999999986
|
... |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.3e-07 Score=100.93 Aligned_cols=266 Identities=13% Similarity=0.080 Sum_probs=157.2
Q ss_pred CCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEE----ecCchhhHHHHH
Q 037042 709 SENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCC----SIGDFKALFKAL 783 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~----~~~~~~~~~~~l 783 (1002)
...+.||+|+.+.+|-.- +-...+.|+..........+ .+..|... .||-+-.-+.+- ..++ .....-+
T Consensus 14 ~~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~-~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGR-RGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecc--hhhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCC-ccceeEE
Confidence 345779999999999642 11224567766443222222 23333333 455433211110 0011 0001123
Q ss_pred hhccCCCCC-hhHhhhc---cC--CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 784 ALEYMPHGS-LEKYLYS---SN--YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 784 v~e~~~~g~-L~~~l~~---~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
.|..+++.. +.++... .+ ....|...++++..+|.+.+-|| ..|.+-+|+.++|+|+++++.|.+.|-..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccce
Confidence 445544432 2222211 11 14789999999999999999999 889999999999999999999999985433
Q ss_pred ccccCCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhC-CCCCccccccc---ccHH-HHHH
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTG-KKPTNEIFNEG---MTLK-HWVN 927 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg-~~P~~~~~~~~---~~~~-~~~~ 927 (1002)
.... ........+|...|.+||.-. +-.-+...|.|.+||++++++.| +.||.+..... ..+. .+..
T Consensus 165 qi~~---ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 165 QINA---NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred eecc---CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 2221 112335667888999999643 33457779999999999999986 99997743221 1111 1110
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccC--CCCCCCHHHHHHHHHhhcc
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVES--PEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~--P~~Rpt~~evl~~L~~i~~ 990 (1002)
.....--+...........+.....+..+..+..+|+... +.-|||++..+..|.++++
T Consensus 242 ----g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 242 ----GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred ----ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 1111111111111111222233445677888888898763 6789999998888777654
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.1e-08 Score=96.17 Aligned_cols=126 Identities=21% Similarity=0.236 Sum_probs=82.7
Q ss_pred eEEEEEeCCCcEEEEEEeecc-------------cc-------------hhHHHHHHHHHHHHhccCC--CcceeeeEEe
Q 037042 721 SVYKARIQDGMEVAVKVFNQQ-------------CG-------------RAFKSFDVECEVMKSIRHR--NIIKIISCCS 772 (1002)
Q Consensus 721 ~Vy~~~~~~~~~vavK~~~~~-------------~~-------------~~~~~~~~E~~~l~~l~h~--niv~~~~~~~ 772 (1002)
.||.|...+|..||||+.+.. .. ......++|.+.|.++... ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489999888999999986421 00 0124567899999999765 566776543
Q ss_pred cCchhhHHHHHhhccCC--CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHH-HHcCCCCCcEEccCCCCCeeeCCCCcE
Q 037042 773 IGDFKALFKALALEYMP--HGSLEKYLYSSNYILDIFQRLNIMIDVASALEY-LYFGYSTPVIHCDLKPSNVLLGDNMVA 849 (1002)
Q Consensus 773 ~~~~~~~~~~lv~e~~~--~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~-LH~~~~~~iiHrDlkp~NILl~~~~~~ 849 (1002)
. .++||||++ |..+..+.... ++......++.+++..+.. +| ..+|+|+|+.+.||+++++ .+
T Consensus 80 -~------~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 80 -R------NVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp -T------TEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CE
T ss_pred -C------CEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eE
Confidence 2 259999998 65554433322 1123345677778775555 46 8999999999999999887 99
Q ss_pred EEeccccccccc
Q 037042 850 HLSDFGITKLLT 861 (1002)
Q Consensus 850 kl~DfGla~~~~ 861 (1002)
.|+|||.+....
T Consensus 146 ~iIDf~qav~~~ 157 (188)
T PF01163_consen 146 YIIDFGQAVDSS 157 (188)
T ss_dssp EE--GTTEEETT
T ss_pred EEEecCcceecC
Confidence 999999886543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.9e-09 Score=121.46 Aligned_cols=197 Identities=24% Similarity=0.298 Sum_probs=123.7
Q ss_pred ccccEEecCCCCCCCCC-CcccCCCCCccEEEccCCccCccCCccccCC-CCCCEEEccCCcccc---cC---CccccC-
Q 037042 375 HSLKIFDMSDCNVSGSI-PEEIGNLTNLIGFYLGGNNLNGSIPITLGKL-QKLQVLYFPDNKLEG---SI---PDEVCR- 445 (1002)
Q Consensus 375 ~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~---~~---p~~~~~- 445 (1002)
++++.+.+-.-.=.+.. |-.+....+|+.|.|.+..|.. ...+..+ ..|+.|-- +|.+.. .+ -..+++
T Consensus 84 qkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns 160 (1096)
T KOG1859|consen 84 QKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNS 160 (1096)
T ss_pred hhheeeeecccCCCCCCCCceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccc
Confidence 34445544332222222 4456667788888888887763 1112211 23444432 222221 01 111221
Q ss_pred --CccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCccccccccccee
Q 037042 446 --LAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523 (1002)
Q Consensus 446 --l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 523 (1002)
.-.|...+.++|.+. ....++.-++.|+.|+|++|+++.. ..+..+++|++|||++|.|+.+.--...+++ |+.
T Consensus 161 ~~Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~ 236 (1096)
T KOG1859|consen 161 PVWNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQL 236 (1096)
T ss_pred hhhhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-hee
Confidence 235777788888887 5666777788888888888888776 3777888888888888888854333344444 888
Q ss_pred eeCCCCccCccCcccccCCccccEEEccCeeecccC-Ccccccccccceecccccccc
Q 037042 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSI-PDSFGDLMSLKSLNLSNNNLS 580 (1002)
Q Consensus 524 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 580 (1002)
|.+++|.++.. ..+.+|++|+.|||++|-|++.- -.-++.|..|+.|+|.+|.+-
T Consensus 237 L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 237 LNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred eeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 88888888754 45677888888888888887532 123456677888888888876
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.2e-07 Score=98.98 Aligned_cols=144 Identities=13% Similarity=0.072 Sum_probs=99.3
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccch-hH----------HHHHHHHHHHHhccCC--CcceeeeEEecCchh-
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR-AF----------KSFDVECEVMKSIRHR--NIIKIISCCSIGDFK- 777 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~----------~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~- 777 (1002)
+.+-......|+++.+ +|+.|.||+....... .. ..+.+|.+.+.++... .+++.+++.......
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444455777766 4788999976432211 11 1377899988888533 344455555332111
Q ss_pred hHHHHHhhccCCCC-ChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-------CCc
Q 037042 778 ALFKALALEYMPHG-SLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-------NMV 848 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g-~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-------~~~ 848 (1002)
....++|+|++++. +|.+++... ....+......++.+++..+.-|| ..||+|+|+++.|||++. ++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 11246999999886 798887542 223455667789999999999999 999999999999999975 578
Q ss_pred EEEeccccccc
Q 037042 849 AHLSDFGITKL 859 (1002)
Q Consensus 849 ~kl~DfGla~~ 859 (1002)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998753
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.2e-07 Score=100.79 Aligned_cols=171 Identities=19% Similarity=0.227 Sum_probs=127.7
Q ss_pred cceEEEEE-eCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccCCC-CChhHh
Q 037042 719 FGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPH-GSLEKY 796 (1002)
Q Consensus 719 ~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~-g~L~~~ 796 (1002)
-.+.||+. ..||..|++|+++............-+++++++.|+|||++.+++....+.....++||+|+++ ++|.+.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 35789997 4489999999995443222223344578899999999999999887555444556799999886 467665
Q ss_pred hhcc--------------CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 797 LYSS--------------NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 797 l~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
-... +...++...|.++.|++.||.++| +.|+.-+-+.+.+|+++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 4321 113567788999999999999999 89999999999999999999999998887655443
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCC
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P 911 (1002)
+.. +| +. --.+-|.=.||.+++.|.||..-
T Consensus 446 d~~--------------~~--le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT--------------EP--LE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC--------------cc--hh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 320 11 11 12457999999999999999765
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.3e-09 Score=94.82 Aligned_cols=82 Identities=29% Similarity=0.441 Sum_probs=57.2
Q ss_pred CcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeec
Q 037042 103 LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLS 182 (1002)
Q Consensus 103 L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 182 (1002)
|+..+|++|.|. ..|..+-...+.++.|+|++|.|+ .+|..+..++.|+.|++++|.|. ..|..|..|.+|-.|+..
T Consensus 55 l~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 55 LTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred EEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCC
Confidence 333455555554 455554445566777777777777 67777888888888888888887 667777778888888877
Q ss_pred ccccc
Q 037042 183 FNGLQ 187 (1002)
Q Consensus 183 ~N~l~ 187 (1002)
+|.+.
T Consensus 132 ~na~~ 136 (177)
T KOG4579|consen 132 ENARA 136 (177)
T ss_pred CCccc
Confidence 77765
|
|
| >COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.2e-08 Score=102.47 Aligned_cols=191 Identities=22% Similarity=0.210 Sum_probs=113.1
Q ss_pred CCCCCCEEeCCCCcccccCCc----cccCCCCCceEEcccccCCCCCcc--------------ccccccccceeeecccc
Q 037042 124 NLPFFESLNLSKNMFHGGIPS----ALSNCTYLRILRLSYNDFAGGIPK--------------EIGNLTKLEELYLSFNG 185 (1002)
Q Consensus 124 ~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~--------------~~~~l~~L~~L~Ls~N~ 185 (1002)
..|.|+..+||+|.|....|+ .+++-+.|++|.|++|.+. .+.. -..+-+.|+..++..|+
T Consensus 90 kcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rigkal~~la~nKKaa~kp~Le~vicgrNR 168 (388)
T COG5238 90 KCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNR 168 (388)
T ss_pred cCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCC-ccchhHHHHHHHHHHHHhhhccCCCceEEEeccch
Confidence 456777777777776654443 3566677888888888764 2221 12344678889999998
Q ss_pred ccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccc-----cccccccccccceeecccCCCc
Q 037042 186 LQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV-----IPAEIFNMSTIQGVGLQNNSLS 260 (1002)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~ 260 (1002)
+..-+..- ....+..-.+|+++.+.+|.|.-. +-..++.+.+|+.|||.+|-++
T Consensus 169 lengs~~~---------------------~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft 227 (388)
T COG5238 169 LENGSKEL---------------------SAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFT 227 (388)
T ss_pred hccCcHHH---------------------HHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchh
Confidence 87422111 111222335788888888877521 1123456677888888888776
Q ss_pred --cc-cCCccccCCCccchhhccccccccccccccc------ccCCCCeeecCCCccCCCCccc-------cccccccch
Q 037042 261 --GS-LQSIPYVRLPNLEELYLWGNHFSGSIPNFIF------NASKLSRLELQKNSFSGFIPST-------FGNLRNLKR 324 (1002)
Q Consensus 261 --~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------~l~~L~~L~L~~N~l~~~~p~~-------~~~l~~L~~ 324 (1002)
|+ .-.......+.|++|.+..|-++..-...+. ..++|..|-..+|.+.+-+-.. =.+++-|..
T Consensus 228 ~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~ 307 (388)
T COG5238 228 LEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVD 307 (388)
T ss_pred hhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHH
Confidence 11 1112233445678888888777654333222 2467777778877765432111 135677777
Q ss_pred hccccccCccch
Q 037042 325 LGLNNNHLTSLT 336 (1002)
Q Consensus 325 L~L~~N~l~~l~ 336 (1002)
|.+.+|+|....
T Consensus 308 le~ngNr~~E~~ 319 (388)
T COG5238 308 LERNGNRIKELA 319 (388)
T ss_pred HHHccCcchhHH
Confidence 777777777654
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.2e-09 Score=117.98 Aligned_cols=178 Identities=28% Similarity=0.326 Sum_probs=87.9
Q ss_pred CcccCCCCCCCEEEcccCCCCCCCCcccccc-cCCcEEEecccccc----------cccCcccCCCCCCCCEEeCCCCcc
Q 037042 70 PSRLGNLSSLQSLFLHSNQFSGSIPFSIFNI-HTLKLLSFGDNQLS----------GEIPTNICSNLPFFESLNLSKNMF 138 (1002)
Q Consensus 70 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~----------~~ip~~~~~~l~~L~~L~Ls~N~l 138 (1002)
|-.|..+++|++|.|.++.+.. ...+..+ .+|++|.-. |.+. |++-.+. .-..|...+.+.|++
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~--~Wn~L~~a~fsyN~L 176 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSP--VWNKLATASFSYNRL 176 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccch--hhhhHhhhhcchhhH
Confidence 6688999999999999998862 1112211 123333221 1111 1111110 012344555555555
Q ss_pred cccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCcc
Q 037042 139 HGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE 218 (1002)
Q Consensus 139 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~ 218 (1002)
. .+-.++.-++.|+.|||++|+++... .+..|++|++|||++|.|.- +|.-
T Consensus 177 ~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~--------------------------vp~l 227 (1096)
T KOG1859|consen 177 V-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRH--------------------------VPQL 227 (1096)
T ss_pred H-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhcc--------------------------cccc
Confidence 5 44455555556666666666655321 45555566666666666552 1110
Q ss_pred -ccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccc
Q 037042 219 -IGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHF 284 (1002)
Q Consensus 219 -l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 284 (1002)
-..+. |+.|.|++|.++.. ..+.++.+|+.||+++|-|++.-+-.+.+.|..|+.|+|.+|.+
T Consensus 228 ~~~gc~-L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 228 SMVGCK-LQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred chhhhh-heeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 01122 55555555555432 23445555555555555554433333444455555666666554
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.6e-07 Score=93.47 Aligned_cols=134 Identities=22% Similarity=0.243 Sum_probs=98.5
Q ss_pred CCCCceeeccCcceEEEEEeCCCcEEEEEEeecc------------------cc----hhHHHHHHHHHHHHhccCC--C
Q 037042 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQ------------------CG----RAFKSFDVECEVMKSIRHR--N 763 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~------------------~~----~~~~~~~~E~~~l~~l~h~--n 763 (1002)
..+...||-|--+.||.|....|.++|||.-+.. .. ......++|.++|+++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 3456889999999999999999999999964310 00 1234567899999999654 6
Q ss_pred cceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee
Q 037042 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL 843 (1002)
Q Consensus 764 iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl 843 (1002)
|.+.+++- ..++||||++|-.|...- ++......++..|.+-+.... ..||||+|+.+-||++
T Consensus 173 VP~P~~~n--------RHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV 235 (304)
T COG0478 173 VPKPIAWN--------RHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILV 235 (304)
T ss_pred CCCccccc--------cceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEE
Confidence 77776542 236999999997665442 122333455666666666665 6889999999999999
Q ss_pred CCCCcEEEecccccc
Q 037042 844 GDNMVAHLSDFGITK 858 (1002)
Q Consensus 844 ~~~~~~kl~DfGla~ 858 (1002)
++||.+.++||--+.
T Consensus 236 ~~dg~~~vIDwPQ~v 250 (304)
T COG0478 236 TEDGDIVVIDWPQAV 250 (304)
T ss_pred ecCCCEEEEeCcccc
Confidence 999999999996554
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.6e-08 Score=91.31 Aligned_cols=135 Identities=22% Similarity=0.235 Sum_probs=90.6
Q ss_pred CcccccccccccccCCcc---ccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEE
Q 037042 473 LRNLSLASNELISVIPST---FWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLF 549 (1002)
Q Consensus 473 L~~L~L~~N~l~~~~~~~---~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 549 (1002)
+..++|+++++-. +++. +.....|+..+|++|.+....+..-...+.++.|+|++|.|+ .+|..+..++.|+.|+
T Consensus 29 ~h~ldLssc~lm~-i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLMY-IADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhhH-HHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 4556666666532 2333 333455666788888887543333344557888888888887 4567788888888888
Q ss_pred ccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCCC
Q 037042 550 LEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGG 611 (1002)
Q Consensus 550 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 611 (1002)
++.|.+. ..|..|..|.+|-.|+..+|.+. .+|..+-.-......++.+++|.+.-|...
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccc
Confidence 8888887 67777777888888888888877 444443333344455667778887777653
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.3e-07 Score=107.95 Aligned_cols=152 Identities=15% Similarity=0.185 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeec-------cCCCCcccccccccC
Q 037042 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT-------QTPATIGYMALEYGS 885 (1002)
Q Consensus 813 ~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~-------~~~gt~~y~aPE~~~ 885 (1002)
+.+++.|+.|+|. +.++||+.|.|++|.++..+..||+.|+.+....++..+.... ...-...|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3455699999996 7789999999999999999999999999886554422111100 111344699999998
Q ss_pred CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHh
Q 037042 886 EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAM 965 (1002)
Q Consensus 886 ~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~ 965 (1002)
+...+.++|+||+||.+|-+..|..+.-........ .. ...-.+.. .......+.+.++.+=+.
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-~~---------~~~~~~~~------~~~~~s~~~p~el~~~l~ 246 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-YS---------FSRNLLNA------GAFGYSNNLPSELRESLK 246 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcch-hh---------hhhccccc------ccccccccCcHHHHHHHH
Confidence 888899999999999999998655553322211110 00 00000000 011112456678888899
Q ss_pred HccccCCCCCCCHHHHH
Q 037042 966 ECTVESPEKRINAKEIV 982 (1002)
Q Consensus 966 ~cl~~~P~~Rpt~~evl 982 (1002)
+++..++..||++.++.
T Consensus 247 k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 247 KLLNGDSAVRPTLDLLL 263 (700)
T ss_pred HHhcCCcccCcchhhhh
Confidence 99999999999777665
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.38 E-value=1e-07 Score=107.14 Aligned_cols=183 Identities=19% Similarity=0.176 Sum_probs=134.1
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCC-cceeeeEEecCchhhHHHHHhhccCCC
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN-IIKIISCCSIGDFKALFKALALEYMPH 790 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~~lv~e~~~~ 790 (1002)
.-.++|+++.+||.+-...+...++.+... .....+++++.+++||| .+..++-+..++ +.+++++++.+
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~----~~~i~~~i~s~ 318 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGED----YLWIPMRICST 318 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCccc----ccchhhhhhcC
Confidence 447889999999987443344446665543 44566899999999999 666666555554 77899999988
Q ss_pred C-ChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeee
Q 037042 791 G-SLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869 (1002)
Q Consensus 791 g-~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 869 (1002)
+ +...-.....-.+...+...+...-+++++|+| +..=+||| ||+..+ +..|..||+....+.+.. +.
T Consensus 319 ~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~ 387 (829)
T KOG0576|consen 319 GRSSALEMTVSEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KP 387 (829)
T ss_pred CccccccCChhhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCcccCccc---cc
Confidence 7 333333222223444555566777788899999 55568898 777655 789999999987766543 23
Q ss_pred ccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 870 TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 870 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
....+|+.|+|||+.....+..+.|+|+.|+-..+|.-|.+|-..
T Consensus 388 ~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred ccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 456789999999999999999999999999988888888887544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1002 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-37 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-20 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-37 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-20 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-34 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 1e-31 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-26 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-25 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 2e-23 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-22 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 1e-21 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 3e-21 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-21 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 4e-21 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 4e-21 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 4e-21 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 4e-21 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 4e-21 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 4e-21 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 4e-21 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 4e-21 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-21 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 5e-21 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 5e-21 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 9e-21 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-20 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 5e-20 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-20 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 8e-20 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 9e-20 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-19 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 4e-19 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 5e-19 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 5e-19 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 7e-19 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 9e-19 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-18 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-18 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 1e-18 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 1e-18 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 1e-18 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 2e-18 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 2e-18 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-18 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 7e-18 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-17 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 3e-17 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 5e-17 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 6e-17 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 6e-17 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 6e-17 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 6e-17 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 7e-17 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 7e-17 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 8e-17 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 8e-17 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-16 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 2e-16 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 3e-16 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 6e-16 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-16 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 8e-16 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 8e-16 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 8e-16 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 8e-16 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 9e-16 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 9e-16 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-15 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-15 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 1e-15 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-15 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 1e-15 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-15 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 1e-15 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 1e-15 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 1e-15 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 1e-15 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-15 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-15 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 1e-15 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-15 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 2e-15 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-15 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-15 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-15 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-15 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-15 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 3e-15 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-15 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 3e-15 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 3e-15 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-15 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 4e-15 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 4e-15 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 5e-15 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 5e-15 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 5e-15 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 5e-15 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 7e-15 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 7e-15 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 8e-15 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 8e-15 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 8e-15 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 8e-15 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 8e-15 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 8e-15 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 9e-15 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 1e-14 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-14 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 1e-14 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-14 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 2e-14 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-14 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-14 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-14 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-14 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 2e-14 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 2e-14 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-14 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 3e-14 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-14 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 3e-14 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-14 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 3e-14 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 3e-14 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-14 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-14 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 4e-14 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 4e-14 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 4e-14 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-14 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 4e-14 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 4e-14 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 4e-14 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 4e-14 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 4e-14 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-14 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-14 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 5e-14 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 5e-14 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 6e-14 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 6e-14 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 6e-14 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 6e-14 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 6e-14 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 7e-14 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 7e-14 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 7e-14 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-14 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 7e-14 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 8e-14 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 8e-14 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 8e-14 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 8e-14 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 9e-14 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 9e-14 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 9e-14 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-13 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-13 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-13 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 1e-13 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-13 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 1e-13 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 1e-13 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-13 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-13 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 3e-13 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 3e-13 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 4e-13 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 4e-13 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 5e-13 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 5e-13 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 5e-13 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 5e-13 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 5e-13 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 5e-13 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 6e-13 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 8e-13 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 9e-13 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 9e-13 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 9e-13 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 9e-13 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 9e-13 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 9e-13 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 9e-13 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 1e-12 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 1e-12 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 1e-12 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-12 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-12 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 1e-12 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 1e-12 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 1e-12 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 1e-12 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 1e-12 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 1e-12 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 1e-12 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 1e-12 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 2e-12 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-12 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 2e-12 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 2e-12 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 2e-12 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-12 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-12 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 2e-12 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-12 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-12 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-12 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 2e-12 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-12 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 2e-12 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 2e-12 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-12 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 2e-12 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 2e-12 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-12 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-12 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-12 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-12 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-12 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 3e-12 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 3e-12 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 3e-12 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-12 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-12 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 3e-12 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 3e-12 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 3e-12 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-12 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-12 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 3e-12 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 3e-12 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-12 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 3e-12 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 4e-12 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-12 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-12 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-12 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-12 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 6e-12 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-12 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-12 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 7e-12 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-12 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 9e-12 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 9e-12 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 9e-12 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 9e-12 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-11 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 1e-11 | ||
| 1oec_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 1e-11 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-11 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 1e-11 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 1e-11 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 1e-11 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 2e-11 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 2e-11 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-11 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 2e-11 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 2e-11 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 2e-11 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 2e-11 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 2e-11 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-11 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 2e-11 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 2e-11 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 2e-11 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 2e-11 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 3e-11 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-11 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 3e-11 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 3e-11 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 3e-11 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-11 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 3e-11 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 3e-11 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 3e-11 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 3e-11 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 3e-11 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 3e-11 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 3e-11 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 3e-11 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 4e-11 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 4e-11 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 4e-11 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-11 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 4e-11 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 4e-11 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 4e-11 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 4e-11 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 4e-11 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 4e-11 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 4e-11 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 4e-11 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 4e-11 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 4e-11 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 4e-11 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 5e-11 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 5e-11 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 5e-11 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 5e-11 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 5e-11 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 5e-11 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 5e-11 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 5e-11 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 5e-11 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 5e-11 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 5e-11 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 5e-11 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 5e-11 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 6e-11 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 6e-11 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 6e-11 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 6e-11 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 6e-11 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 6e-11 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 7e-11 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 7e-11 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 7e-11 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 7e-11 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 7e-11 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-11 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 7e-11 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 7e-11 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 7e-11 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 7e-11 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 7e-11 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 7e-11 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 7e-11 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 7e-11 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 8e-11 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 8e-11 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 8e-11 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 8e-11 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 9e-11 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 9e-11 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 9e-11 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 9e-11 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 1e-10 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 1e-10 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 1e-10 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 1e-10 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 1e-10 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 1e-10 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 1e-10 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 1e-10 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 1e-10 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 1e-10 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 1e-10 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 1e-10 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 1e-10 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 1e-10 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 1e-10 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 1e-10 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 1e-10 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 1e-10 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 1e-10 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 1e-10 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 1e-10 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-10 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 2e-10 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 2e-10 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-10 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 2e-10 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 2e-10 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-10 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-10 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-10 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 2e-10 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 2e-10 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-10 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-10 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-10 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-10 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-10 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-10 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 2e-10 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-10 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 2e-10 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 2e-10 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 2e-10 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 2e-10 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 3e-10 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-10 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 3e-10 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 3e-10 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 3e-10 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 4e-10 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 4e-10 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-10 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 4e-10 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 4e-10 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 5e-10 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 5e-10 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 5e-10 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 5e-10 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 6e-10 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 6e-10 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 7e-10 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 7e-10 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 7e-10 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 7e-10 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 7e-10 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 7e-10 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 8e-10 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 8e-10 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 8e-10 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-09 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 1e-09 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 1e-09 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 1e-09 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-09 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 1e-09 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-09 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 1e-09 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-09 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-09 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 2e-09 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-09 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 2e-09 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-09 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 2e-09 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 2e-09 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 2e-09 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 3e-09 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 3e-09 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 3e-09 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 3e-09 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-09 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-09 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 3e-09 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-09 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-09 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-09 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 4e-09 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 4e-09 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 4e-09 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 4e-09 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 4e-09 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 4e-09 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 4e-09 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 4e-09 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 4e-09 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 4e-09 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 4e-09 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 5e-09 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 5e-09 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 5e-09 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 5e-09 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 5e-09 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 5e-09 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 5e-09 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 5e-09 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 5e-09 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 6e-09 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 6e-09 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 6e-09 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 6e-09 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 7e-09 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 7e-09 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 7e-09 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 8e-09 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 9e-09 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 9e-09 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 9e-09 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 1e-08 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-08 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 1e-08 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 1e-08 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 1e-08 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 1e-08 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 1e-08 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 1e-08 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 1e-08 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 2e-08 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-08 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 2e-08 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 2e-08 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 2e-08 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 2e-08 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 2e-08 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 2e-08 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 3e-08 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 3e-08 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-08 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 3e-08 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-08 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 3e-08 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 4e-08 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 4e-08 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 4e-08 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-08 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 4e-08 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 6e-08 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 6e-08 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 6e-08 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 7e-08 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 8e-08 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 8e-08 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 8e-08 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 9e-08 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 9e-08 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 9e-08 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 1e-07 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 1e-07 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 1e-07 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-07 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-07 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 2e-07 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 2e-07 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-07 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 3e-07 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 3e-07 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 3e-07 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 4e-07 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 4e-07 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 4e-07 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 4e-07 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 5e-07 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 5e-07 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 5e-07 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 5e-07 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 5e-07 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 5e-07 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 6e-07 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 6e-07 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 6e-07 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 7e-07 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 7e-07 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 7e-07 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 8e-07 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 9e-07 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 9e-07 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 9e-07 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 9e-07 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 9e-07 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 9e-07 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 1e-06 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 1e-06 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 1e-06 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 1e-06 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 1e-06 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 1e-06 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 1e-06 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 1e-06 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-06 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-06 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 2e-06 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 2e-06 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-06 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 2e-06 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-06 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 2e-06 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-06 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-06 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-06 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 2e-06 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 2e-06 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 2e-06 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-06 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 2e-06 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 2e-06 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 2e-06 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 2e-06 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 2e-06 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 2e-06 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 2e-06 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 2e-06 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 2e-06 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 2e-06 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 2e-06 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 2e-06 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-06 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 2e-06 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 2e-06 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-06 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 2e-06 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 2e-06 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-06 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 2e-06 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-06 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 2e-06 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 2e-06 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-06 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 2e-06 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 2e-06 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-06 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 3e-06 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-06 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 3e-06 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 3e-06 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-06 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 3e-06 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 3e-06 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 3e-06 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 3e-06 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 3e-06 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-06 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 3e-06 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 3e-06 | ||
| 3vid_A | 356 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 3e-06 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 3e-06 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 3e-06 | ||
| 3vhk_A | 368 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 4e-06 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 4e-06 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 4e-06 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 4e-06 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 5e-06 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 5e-06 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 5e-06 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 5e-06 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 5e-06 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 5e-06 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 5e-06 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 5e-06 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 5e-06 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 5e-06 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 5e-06 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 5e-06 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 5e-06 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 6e-06 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 6e-06 | ||
| 2h34_A | 309 | Apoenzyme Crystal Structure Of The Tuberculosis Ser | 7e-06 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 7e-06 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 7e-06 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 8e-06 | ||
| 3e6j_A | 229 | Crystal Structure Of Variable Lymphocyte Receptor ( | 9e-06 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 1e-05 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 1e-05 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 1e-05 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-05 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-05 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 1e-05 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 1e-05 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-05 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 1e-05 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-05 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 1e-05 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 1e-05 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 1e-05 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-05 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 1e-05 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 1e-05 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-05 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 1e-05 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-05 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 1e-05 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-05 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 2e-05 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 2e-05 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 2e-05 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 2e-05 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 2e-05 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 2e-05 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 2e-05 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 2e-05 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 2e-05 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 2e-05 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-05 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-05 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 2e-05 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 2e-05 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 2e-05 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 2e-05 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 2e-05 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-05 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 2e-05 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-05 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-05 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 2e-05 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 2e-05 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 2e-05 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 2e-05 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-05 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 2e-05 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 2e-05 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 2e-05 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 2e-05 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 2e-05 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 3e-05 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 3e-05 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 3e-05 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 3e-05 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-05 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-05 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-05 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 3e-05 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 3e-05 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 3e-05 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-05 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 3e-05 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-05 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 3e-05 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 3e-05 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 4e-05 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 4e-05 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 4e-05 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 4e-05 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 4e-05 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 4e-05 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 4e-05 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 4e-05 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 4e-05 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 4e-05 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 4e-05 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 4e-05 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 4e-05 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 4e-05 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 4e-05 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 4e-05 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 4e-05 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 4e-05 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 4e-05 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 4e-05 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 4e-05 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 4e-05 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 4e-05 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 4e-05 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 4e-05 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 4e-05 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 4e-05 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 4e-05 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 4e-05 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 4e-05 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 4e-05 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 5e-05 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 5e-05 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 5e-05 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-05 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 6e-05 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 6e-05 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 6e-05 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 6e-05 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 7e-05 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 7e-05 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 7e-05 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 8e-05 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 8e-05 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 8e-05 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 8e-05 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 8e-05 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 8e-05 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 9e-05 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 9e-05 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 9e-05 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 9e-05 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 9e-05 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 9e-05 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 1e-04 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 1e-04 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 1e-04 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 1e-04 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 1e-04 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 1e-04 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 1e-04 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-04 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 1e-04 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 1e-04 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-04 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 1e-04 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 1e-04 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 2e-04 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 2e-04 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 2e-04 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 2e-04 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-04 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 2e-04 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 2e-04 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-04 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 2e-04 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 2e-04 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 2e-04 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 2e-04 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 3e-04 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 3e-04 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 3e-04 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-04 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-04 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-04 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 3e-04 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 3e-04 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 3e-04 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 3e-04 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 3e-04 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-04 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 3e-04 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 3e-04 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 3e-04 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 3e-04 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 4e-04 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 4e-04 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 4e-04 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 4e-04 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 4e-04 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 4e-04 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 4e-04 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 4e-04 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 4e-04 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 5e-04 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 5e-04 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 5e-04 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 5e-04 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 5e-04 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 5e-04 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 5e-04 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 5e-04 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 5e-04 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 5e-04 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 5e-04 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 5e-04 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 6e-04 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 6e-04 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 6e-04 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 6e-04 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 6e-04 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 6e-04 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 6e-04 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 6e-04 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 6e-04 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 6e-04 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 6e-04 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 7e-04 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 7e-04 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 7e-04 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 7e-04 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 7e-04 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 7e-04 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 7e-04 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 7e-04 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 7e-04 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 7e-04 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 7e-04 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 8e-04 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 8e-04 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 8e-04 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 8e-04 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 8e-04 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 8e-04 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 8e-04 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 8e-04 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 8e-04 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 8e-04 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 8e-04 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 8e-04 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 9e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|1OEC|A Chain A, Fgfr2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr) Rbc36 In Complex With H-Trisaccharide Length = 229 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1002 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-176 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-160 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-108 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-73 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-39 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 3e-36 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-99 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 6e-98 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-94 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 4e-88 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 4e-59 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 5e-11 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-93 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 5e-82 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-25 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-92 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 5e-72 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-65 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 9e-92 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-85 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 5e-82 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 5e-72 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 8e-70 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 8e-52 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 5e-32 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-80 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 4e-60 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-33 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 8e-33 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-23 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 8e-18 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 5e-05 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 3e-73 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 5e-71 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 9e-62 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 8e-50 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-42 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-26 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 7e-17 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-06 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 2e-61 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 2e-59 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 9e-58 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 4e-57 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 6e-54 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-55 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-17 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-54 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-51 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 8e-45 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 4e-33 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-32 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-52 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-48 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 3e-47 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 1e-45 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-50 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-46 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 6e-45 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-36 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-32 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-22 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-04 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 4e-50 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 5e-50 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-46 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 8e-45 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 8e-28 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-26 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 9e-14 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 9e-48 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 2e-47 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 2e-47 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 5e-47 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 1e-46 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 5e-46 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 7e-46 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-43 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 5e-43 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 9e-23 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 4e-22 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 2e-45 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 5e-45 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 6e-38 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 3e-36 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-35 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 3e-33 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 6e-18 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 1e-44 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 2e-44 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 7e-44 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 3e-38 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 6e-36 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 1e-29 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 4e-43 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 1e-42 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 9e-42 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-39 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 3e-36 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 3e-35 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 6e-33 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-23 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 4e-21 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-12 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 6e-41 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 1e-40 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-39 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 4e-33 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 1e-39 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 2e-39 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 2e-39 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 3e-39 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-38 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-38 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 4e-37 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 5e-37 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-35 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 4e-27 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 3e-24 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 9e-14 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 3e-38 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 4e-38 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 8e-38 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-35 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 5e-33 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 9e-20 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 7e-05 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 1e-37 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 1e-37 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 2e-37 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-36 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 9e-30 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 7e-29 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 3e-26 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-25 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-36 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-34 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 3e-16 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-36 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 3e-34 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 8e-30 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 5e-28 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 5e-27 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-36 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-35 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 3e-35 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-21 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 7e-11 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 2e-36 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 6e-36 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 1e-35 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 2e-35 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 2e-35 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-35 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 8e-29 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 6e-25 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 4e-23 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 7e-11 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 3e-35 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 9e-35 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 1e-34 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 2e-34 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 2e-34 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 3e-34 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 4e-34 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 6e-34 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 6e-34 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 6e-34 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 8e-34 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 8e-34 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 9e-34 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-33 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-31 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 9e-29 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-17 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 2e-33 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 2e-33 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 2e-33 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 2e-33 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 3e-33 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 5e-33 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 5e-33 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 9e-33 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 9e-33 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 1e-32 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 1e-32 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 1e-32 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 1e-32 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 1e-32 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 2e-32 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 3e-32 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 4e-32 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 4e-32 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 7e-32 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 8e-32 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 1e-31 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 1e-31 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 2e-31 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 3e-31 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 4e-31 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 6e-31 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 7e-31 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 2e-25 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 9e-19 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 1e-16 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 3e-08 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-30 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-28 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 9e-27 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-25 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 8e-23 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-14 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-10 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 5e-06 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 4e-30 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-29 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 1e-28 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 1e-26 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-16 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 1e-11 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 5e-30 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 9e-30 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 9e-29 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-27 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-25 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-23 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-14 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 4e-06 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 6e-29 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 8e-29 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 3e-28 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 7e-28 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 3e-24 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 4e-24 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-23 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 3e-28 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 4e-28 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 9e-28 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 5e-27 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 9e-27 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 1e-26 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 3e-26 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 4e-26 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 5e-26 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 5e-26 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 1e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 3e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 7e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 9e-24 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 5e-23 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 6e-23 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-13 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-06 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 4e-25 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 4e-25 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 6e-25 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 9e-25 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 1e-24 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 2e-24 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 3e-24 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 3e-24 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 5e-24 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-21 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-18 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-16 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-10 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 5e-05 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 8e-24 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 8e-24 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 3e-23 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 3e-23 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 4e-23 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 5e-23 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 9e-23 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 5e-21 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 9e-17 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 7e-11 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-22 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-19 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-18 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-17 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-17 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-14 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-05 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-04 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 2e-22 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 2e-22 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 5e-22 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 7e-22 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 7e-22 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 8e-22 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 1e-21 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 2e-21 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 5e-21 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 9e-21 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 4e-18 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 8e-15 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 1e-20 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 1e-20 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-20 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-19 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-16 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 5e-15 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-10 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 2e-20 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 2e-20 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 4e-20 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 7e-20 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 5e-18 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-17 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 4e-16 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 1e-19 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-19 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 8e-18 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 1e-16 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 1e-15 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 2e-19 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 3e-19 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 4e-19 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 5e-19 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-18 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 9e-18 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-17 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-12 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-12 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 7e-11 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-09 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 6e-19 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 6e-19 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 1e-18 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 2e-18 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-18 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 1e-17 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 1e-15 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-14 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 5e-12 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 3e-18 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 3e-18 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 5e-18 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 5e-18 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 1e-17 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-17 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 1e-15 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 7e-15 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 9e-13 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-11 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 9e-18 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 1e-17 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 1e-17 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 1e-17 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 2e-17 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 3e-17 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 3e-17 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 5e-17 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 5e-17 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 6e-17 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 8e-17 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 1e-16 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 1e-16 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 2e-16 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 2e-16 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-16 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 4e-14 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 5e-14 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 9e-12 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 9e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-06 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 3e-16 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 3e-16 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 4e-16 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 7e-16 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 1e-15 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 2e-15 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 2e-15 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-15 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 3e-15 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 8e-14 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-13 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-11 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 3e-11 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 7e-11 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 4e-15 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 4e-15 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 5e-15 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 6e-15 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 7e-15 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 1e-14 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 2e-14 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-14 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 1e-13 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 9e-06 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 2e-14 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 2e-14 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 2e-14 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 3e-14 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 4e-14 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 5e-14 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 5e-14 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 6e-14 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 7e-14 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 9e-14 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-11 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 5e-11 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 1e-09 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 8e-09 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 3e-07 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-05 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 1e-13 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-13 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-12 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 3e-12 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 5e-09 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 4e-06 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 5e-06 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 1e-13 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 1e-13 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 2e-13 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 2e-13 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 2e-13 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 1e-09 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 6e-09 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 3e-13 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 3e-13 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 4e-13 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 5e-13 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 5e-13 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 8e-13 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-12 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 1e-11 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-10 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 8e-09 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 7e-13 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-12 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 6e-11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-10 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 4e-04 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 7e-13 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 7e-13 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 8e-13 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 9e-13 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 1e-12 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 1e-12 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 1e-12 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 2e-12 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 2e-12 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 3e-12 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 3e-12 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 4e-12 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 4e-12 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 6e-12 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-10 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 9e-10 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-09 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 2e-06 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 5e-12 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 5e-12 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 5e-12 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 6e-12 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 7e-12 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 9e-12 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 1e-11 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-11 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-09 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 4e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 7e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 9e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-04 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 5e-04 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 2e-11 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 3e-11 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 3e-11 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 4e-11 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 5e-11 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 5e-11 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 5e-11 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 5e-11 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 6e-11 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 5e-09 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 4e-08 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 4e-07 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 3e-06 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 3e-06 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 7e-04 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 8e-04 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 6e-11 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 9e-11 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 9e-11 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 1e-10 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 1e-10 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 2e-10 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 2e-10 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 2e-10 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 2e-10 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 2e-10 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 8e-10 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-08 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-08 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 4e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-06 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 4e-06 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 8e-05 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 8e-10 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-09 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-06 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-06 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-05 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 3e-05 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 7e-05 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-04 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 5e-04 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 1e-09 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 2e-07 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 1e-06 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 1e-09 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 2e-09 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 3e-09 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 3e-09 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 9e-09 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-08 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-06 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 3e-09 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 4e-09 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 5e-09 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 6e-09 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 4e-08 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 8e-04 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 6e-09 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 7e-09 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 2e-05 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 2e-05 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 1e-04 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 1e-08 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 1e-08 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 1e-08 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 2e-06 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 3e-06 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 4e-06 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 1e-05 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 1e-05 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 7e-05 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 9e-05 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 7e-08 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 8e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 8e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-07 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 8e-05 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-04 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-04 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-04 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-04 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 1e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-05 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-05 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 8e-05 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-04 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-07 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 4e-07 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 4e-06 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 6e-06 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-05 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-05 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-05 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 2e-07 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 7e-07 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 1e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 6e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 3e-05 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 4e-05 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 5e-05 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 2e-04 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 6e-04 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 7e-07 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 2e-06 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-04 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-04 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 7e-04 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 2e-06 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 3e-06 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 5e-05 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 1e-04 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 2e-04 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 8e-04 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 5e-06 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 5e-05 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 2e-04 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 3e-04 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 6e-04 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 5e-06 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 9e-06 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 2e-05 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 2e-05 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 3e-05 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 4e-05 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 5e-05 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 5e-05 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 7e-05 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 7e-05 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 8e-05 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 3e-04 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 3e-04 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 4e-04 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 5e-04 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 7e-04 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 531 bits (1369), Expect = e-176
Identities = 190/611 (31%), Positives = 276/611 (45%), Gaps = 49/611 (8%)
Query: 37 SISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFS 96
+IS +G + L++S + S IP LG+ S+LQ L + N+ SG +
Sbjct: 184 AISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRA 242
Query: 97 IFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALS-NCTYLRIL 155
I LKLL+ NQ G IP +L + L+L++N F G IP LS C L L
Sbjct: 243 ISTCTELKLLNISSNQFVGPIPPLPLKSL---QYLSLAENKFTGEIPDFLSGACDTLTGL 299
Query: 156 RLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI 215
LS N F G +P G+ + LE L LS N G E+
Sbjct: 300 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSG-------------------------EL 334
Query: 216 PNE-IGNLRNLEVLALGLNKLVGVIPAEIFNMST-IQGVGLQNNSLSGSL-QSIPYVRLP 272
P + + +R L+VL L N+ G +P + N+S + + L +N+ SG + ++
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394
Query: 273 NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHL 332
L+ELYL N F+G IP + N S+L L L N SG IPS+ G+L L+ L L N L
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 333 TSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP 392
L K LE + L N + G + + N + +L +S+ ++G IP
Sbjct: 455 EG-----EIPQELMYVKTLETLILDFNDLTGEIPS-GLSNCT-NLNWISLSNNRLTGEIP 507
Query: 393 EEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQL 452
+ IG L NL L N+ +G+IP LG + L L N G+IP + +
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ----SG 563
Query: 453 DLSNNKLSGSIPACFGDLASLRNLSLASN--ELISVIPSTFWNLKDILYLNLSSNSLTGP 510
++ N ++G + + A N E + L N++S G
Sbjct: 564 KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGH 623
Query: 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLK 570
N ++ +D S N SG IP IG + L L L +N + GSIPD GDL L
Sbjct: 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683
Query: 571 SLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGS 630
L+LS+N L G IP ++ L+ L +++LS N L G IP+ G F F F N LCG
Sbjct: 684 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743
Query: 631 PNLHVPPCKTS 641
P +P C S
Sbjct: 744 P---LPRCDPS 751
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 489 bits (1262), Expect = e-160
Identities = 177/641 (27%), Positives = 292/641 (45%), Gaps = 40/641 (6%)
Query: 2 AANTSNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNIS 61
A+ + ++ ++ L + K + + +W+S+ + C + GVTC +VT++++S
Sbjct: 4 ASPSQSLYREIHQLISFKDVLPDKN---LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLS 58
Query: 62 HLSLS---GTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118
L+ + S L +L+ L+SLFL ++ +GS+ +L L N LSG +
Sbjct: 59 SKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVT 117
Query: 119 TNIC-SNLPFFESLNLSKNMFHGGIP-SALSNCTYLRILRLSYNDFAGGIPKEI---GNL 173
T + + LN+S N S L +L LS N +G
Sbjct: 118 TLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGC 177
Query: 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNI-FVQFSHNFSKCEIPNEIGNLRNLEVLALGL 232
+L+ L +S N + G D N+ F+ S N IP +G+ L+ L +
Sbjct: 178 GELKHLAISGNKISGDVDVSRC----VNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISG 232
Query: 233 NKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFI 292
NKL G I + ++ + + +N G IP + L +L+ L L N F+G IP+F+
Sbjct: 233 NKLSGDFSRAISTCTELKLLNISSNQFVG---PIPPLPLKSLQYLSLAENKFTGEIPDFL 289
Query: 293 F-NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT-SLTLELSFLSSLSNCKY 350
L+ L+L N F G +P FG+ L+ L L++N+ + L ++ +L +
Sbjct: 290 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD-----TLLKMRG 344
Query: 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGN--LTNLIGFYLGG 408
L+ +DLS N G L +S+ NLS SL D+S N SG I + L YL
Sbjct: 345 LKVLDLSFNEFSGELP-ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403
Query: 409 NNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFG 468
N G IP TL +L L+ N L G+IP + L+K+ L L N L G IP
Sbjct: 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463
Query: 469 DLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSM 528
+ +L L L N+L IPS N ++ +++LS+N LTG +P IG L+ L + S
Sbjct: 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 523
Query: 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLE 588
N+FSG IP +G + L +L L N+ G+IP + S ++ N ++G V ++
Sbjct: 524 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ----SGKIAANFIAGKRYVYIK 579
Query: 589 KLSYLKDLNLSFN--KLEGEIPKG-GSFGNFSAESFEGNKL 626
K+ + + N + +G + + +
Sbjct: 580 NDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 620
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 348 bits (896), Expect = e-108
Identities = 95/636 (14%), Positives = 190/636 (29%), Gaps = 72/636 (11%)
Query: 5 TSNITTDLDALHALKTHITNDPTNFF------AKNWNSSISFCNWT---GVTCDVHSHRV 55
T+ D AL + + + NWN + W GV+ + + RV
Sbjct: 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNG-RV 83
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSG----SIPFSIFNIHTLKLLSFGDN 111
T L++ SG +P +G L+ L+ L L S+ P I + +
Sbjct: 84 TGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRM 143
Query: 112 QLSGEIPTNICS-NLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI 170
+ ++ + I + + N+ + K +
Sbjct: 144 HYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNI-TFVSKAV 202
Query: 171 GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLAL 230
LTKL + Y+ + I + + NL++L + +
Sbjct: 203 MRLTKLRQFYMGNSPFVA------ENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEV 256
Query: 231 GLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSI-------PYVRLPNLEELYLWGNH 283
+ +P + + +Q + + N Q ++ +Y+ N+
Sbjct: 257 YNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316
Query: 284 F-SGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFL 342
+ + + KL LE N G +P+ FG+ L L L N +T +
Sbjct: 317 LKTFPVETSLQKMKKLGMLECLYNQLEGKLPA-FGSEIKLASLNLAYNQITEIPANF--- 372
Query: 343 SSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSG-------SIPEEI 395
+ +E + + N + I + ++S + D S + +
Sbjct: 373 --CGFTEQVENLSFAHNKLKYIPNIFDAKSVS-VMSAIDFSYNEIGSVDGKNFDPLDPTP 429
Query: 396 GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455
N+ L N ++ L + N L IP
Sbjct: 430 FKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE-IPKNSL----------- 477
Query: 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSLTGPLPLE 514
F + L ++ L N+L + L ++ ++LS NS + P +
Sbjct: 478 -----KDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQ 531
Query: 515 IGNLKVLVKI------DFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMS 568
N L D N P I L L + N ++ + + +
Sbjct: 532 PLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKI--TPN 588
Query: 569 LKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
+ L++ +N + L ++K +
Sbjct: 589 ISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 254 bits (652), Expect = 1e-73
Identities = 67/455 (14%), Positives = 131/455 (28%), Gaps = 66/455 (14%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
N + T + NL L + +++ +P + + ++L++ N+
Sbjct: 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGIS-- 287
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGG-IPKEIGNLTKL 176
+ + ++I+ + YN+ + + + KL
Sbjct: 288 ---------------GEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKL 332
Query: 177 EELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLV 236
L +N L+G G+ L L L N++
Sbjct: 333 GMLECLYNQLEG--------------------------KLPAFGSEIKLASLNLAYNQIT 366
Query: 237 GVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG-------SI 288
IPA ++ + +N L + + + N +
Sbjct: 367 E-IPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPL 425
Query: 289 PNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLEL--SFLSSLS 346
F +S + L N S F F L + L N LT + +
Sbjct: 426 DPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFK 485
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYL 406
N L IDL N + + L L D+S + S P + N + L GF +
Sbjct: 486 NTYLLTSIDLRFNKLTKLSDDFRATTLP-YLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543
Query: 407 G------GNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460
GN P + L L N + + +++ + LD+ +N
Sbjct: 544 RNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKI--TPNISVLDIKDNPNI 600
Query: 461 GSIPACFGDLASLRNLSLASNELISVIPSTFWNLK 495
+ L ++ + ++K
Sbjct: 601 SIDLSYVCPYIEAGMYMLFYDKTQDIRGCDALDIK 635
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 2e-39
Identities = 32/244 (13%), Positives = 72/244 (29%), Gaps = 12/244 (4%)
Query: 380 FDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG-- 437
F+ + + + G L G +G +P +G+L +L+VL + +
Sbjct: 62 FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNE 121
Query: 438 --SIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLA--SLRNLSLASNELISVIPSTFWN 493
P + Q + L + S+ I +
Sbjct: 122 RLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRI 181
Query: 494 LKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYN 553
+ SN++T + + L L + + F + EY
Sbjct: 182 TLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEA-----WENENSEYA 235
Query: 554 ILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSF 613
+ + +L L + + N +P L+ L ++ +N++ N+ +
Sbjct: 236 QQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDW 295
Query: 614 GNFS 617
+
Sbjct: 296 QALA 299
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 3e-36
Identities = 47/302 (15%), Positives = 91/302 (30%), Gaps = 53/302 (17%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSG-SIPFSIFNIHTLKLLSFGDNQLS 114
+LN+++ ++ + G +++L N+ F ++ + + F N++
Sbjct: 356 ASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIG 415
Query: 115 GEIPTNICSNLPFF-------ESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAG--- 164
+ L S+NLS N S + L + L N
Sbjct: 416 S-VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPK 474
Query: 165 ----GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI- 219
+ N L + L FN L + ++
Sbjct: 475 NSLKDENENFKNTYLLTSIDLRFNKLTK--------------------------LSDDFR 508
Query: 220 -GNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGS---LQSIPYV--RLPN 273
L L + L N P + N ST++G G++N + L+ P P+
Sbjct: 509 ATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPS 567
Query: 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
L +L + N + I +S L+++ N S L +
Sbjct: 568 LTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ 624
Query: 334 SL 335
+
Sbjct: 625 DI 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 326 bits (838), Expect = 3e-99
Identities = 112/606 (18%), Positives = 208/606 (34%), Gaps = 61/606 (10%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
LN+ H LS ++L L L SN L L N LS
Sbjct: 78 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS-T 136
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALS--NCTYLRILRLSYNDFAGGIPKEIGNLTK 175
L + L LS N L + L+ L LS N P + +
Sbjct: 137 KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGR 196
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
L L+L+ L + ++ L+L ++L
Sbjct: 197 LFGLFLNNVQLGPSLTEKLCLEL----------------------ANTSIRNLSLSNSQL 234
Query: 236 VGVIPAEIFNM--STIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293
+ + + + L N+L+ + + + LP LE +L N+ + +
Sbjct: 235 STTSNTTFLGLKWTNLTMLDLSYNNLNV-VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH 293
Query: 294 NASKLSRLELQKN---------SFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSS 344
+ L L+++ S +F L+ L+ L + +N + + +
Sbjct: 294 GLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS-----NM 348
Query: 345 LSNCKYLEFIDLSSN--SIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLI 402
+ L+++ LS++ S+ + + V L I +++ +S + L +L
Sbjct: 349 FTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLE 408
Query: 403 GFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSG 461
LG N + + L+ + +Y NK + + + +L L L
Sbjct: 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN 468
Query: 462 --SIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT--------GPL 511
S P+ F L +L L L++N + ++ L+ + L+L N+L G
Sbjct: 469 VDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGP 528
Query: 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKS 571
+ L L ++ N F + + +L+ + L N L F + +SLKS
Sbjct: 529 IYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKS 588
Query: 572 LNLSNNNLSGSIPVSLEK-LSYLKDLNLSFNKLEGEIPKGGSFGNFSAES-----FEGNK 625
LNL N ++ L +L++ FN + F N+ E+ +
Sbjct: 589 LNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSH 648
Query: 626 LLCGSP 631
LC +P
Sbjct: 649 YLCNTP 654
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 322 bits (828), Expect = 6e-98
Identities = 118/589 (20%), Positives = 205/589 (34%), Gaps = 57/589 (9%)
Query: 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114
+T LN++H L + S L SL + N S P + LK+L+ N+LS
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT 174
+ + L+L N + L L LS+N + L
Sbjct: 87 Q-LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLE 145
Query: 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK 234
L+EL LS N +Q +I +L+ L L N+
Sbjct: 146 NLQELLLSNNKIQALKSEEL-----------------------DIFANSSLKKLELSSNQ 182
Query: 235 LVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYV--RLPNLEELYLWGNHFSGSIPNFI 292
+ P + + G+ L N L SL + ++ L L + S +
Sbjct: 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242
Query: 293 FN--ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350
+ L+ L+L N+ + +F L L+ L N++ L F SL
Sbjct: 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL-----FSHSLHGLFN 297
Query: 351 LEFIDLSSNSIDGILSRKSVGNLS-------HSLKIFDMSDCNVSGSIPEEIGNLTNLIG 403
+ +++L + +S S+ + L+ +M D ++ G L NL
Sbjct: 298 VRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKY 357
Query: 404 FYLGGNNLNGSIPITLG----KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKL 459
L + + L +L NK+ D L + LDL N++
Sbjct: 358 LSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEI 417
Query: 460 SGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG--PLPLEIG 516
+ + L ++ + L+ N+ + + ++F + + L L +L P
Sbjct: 418 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 477
Query: 517 NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ--------GSIPDSFGDLMS 568
L+ L +D S NN + + + + G++ L+ L L++N L G L
Sbjct: 478 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSH 537
Query: 569 LKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
L LNL +N + L LK ++L N L F N
Sbjct: 538 LHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA--SVFNNQV 584
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 313 bits (804), Expect = 2e-94
Identities = 124/589 (21%), Positives = 203/589 (34%), Gaps = 66/589 (11%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
+ SHL L+ +P L +++ L L NQ + L L G N +S +
Sbjct: 9 ADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK-L 64
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
+C LP + LNL N + CT L L L N L
Sbjct: 65 EPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLI 124
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237
L LS NGL L NL+ L L NK+
Sbjct: 125 TLDLSHNGLSST-------------------------KLGTQVQLENLQELLLSNNKIQA 159
Query: 238 VIPAEI--FNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-- 293
+ E+ F S+++ + L +N + + + L L+L S+ +
Sbjct: 160 LKSEELDIFANSSLKKLELSSNQIKE-FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLE 218
Query: 294 -NASKLSRLELQKNSFSGFIPSTFGNLR--NLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350
+ + L L + S +TF L+ NL L L+ N+L + S +
Sbjct: 219 LANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG-----NDSFAWLPQ 273
Query: 351 LEFIDLSSNSIDGI-------LSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIG 403
LE+ L N+I + L NL S +S ++ L L
Sbjct: 274 LEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEH 333
Query: 404 FYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLE-GSIPDEVCR---LAKVYQLDLSNNKL 459
+ N++ G L L+ L ++ ++ +E + ++ L+L+ NK+
Sbjct: 334 LNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKI 393
Query: 460 SGSIPACFGDLASLRNLSLASNELISVIP-STFWNLKDILYLNLSSNSLTGPLPLEIGNL 518
S F L L L L NE+ + + L++I + LS N +
Sbjct: 394 SKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALV 453
Query: 519 KVLVKIDFSMNNFSGV--IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSN 576
L ++ V P+ +++L L L N + D L L+ L+L +
Sbjct: 454 PSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQH 513
Query: 577 NNLS--------GSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
NNL+ G L+ LS+L LNL N + F +
Sbjct: 514 NNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPV--EVFKDLF 560
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 296 bits (759), Expect = 4e-88
Identities = 113/558 (20%), Positives = 187/558 (33%), Gaps = 76/558 (13%)
Query: 78 SLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNM 137
S + + + +P + + +L+ NQL N + SL++ N
Sbjct: 5 SHEVADCSHLKLT-QVPDDLPT--NITVLNLTHNQLRRLPAANF-TRYSQLTSLDVGFNT 60
Query: 138 FHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQI 197
P L++L L +N+ + K T L EL+L N +Q
Sbjct: 61 ISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK--------- 111
Query: 198 FVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNN 257
N +NL L L N L
Sbjct: 112 ----------------IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ------------ 143
Query: 258 SLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFI--FNASKLSRLELQKNSFSGFIPST 315
L NL+EL L N + F S L +LEL N F P
Sbjct: 144 -------------LENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 190
Query: 316 FGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375
F + L L LNN L E L + + LS++ + + +G
Sbjct: 191 FHAIGRLFGLFLNNVQLGPSLTEKLCLE--LANTSIRNLSLSNSQLSTTSNTTFLGLKWT 248
Query: 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDN-- 433
+L + D+S N++ + L L F+L NN+ +L L ++ L +
Sbjct: 249 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFT 308
Query: 434 -------KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASN--ELI 484
L L + L++ +N + G F L +L+ LSL+++ L
Sbjct: 309 KQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLR 368
Query: 485 SVIPSTFWNL--KDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP-NAIGG 541
++ TF +L + LNL+ N ++ L L +D +N + G
Sbjct: 369 TLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRG 428
Query: 542 IKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSG--SIPVSLEKLSYLKDLNLS 599
++++ ++L YN +SF + SL+ L L L S P + L L L+LS
Sbjct: 429 LENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488
Query: 600 FNKLEGEIPKGGSFGNFS 617
N +
Sbjct: 489 NNNIANIND--DMLEGLE 504
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 214 bits (547), Expect = 4e-59
Identities = 85/460 (18%), Positives = 153/460 (33%), Gaps = 87/460 (18%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
T L++S+ +L+ L L+ FL N S+ + ++ L+ +
Sbjct: 251 TMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS---- 306
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
F ++S + L L + ND G L
Sbjct: 307 ------------FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLIN 354
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
L+ L LS + L+ FV +H+ L +L L NK+
Sbjct: 355 LKYLSLSNSFTS-------LRTLTNETFVSLAHS--------------PLHILNLTKNKI 393
Query: 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295
+ + ++ + L N + L + L N+ E+YL N + N
Sbjct: 394 SKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALV 453
Query: 296 SKLSRLELQKNSFSGF--IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353
L RL L++ + PS F LRNL L L+NN++ ++ ++ L + LE
Sbjct: 454 PSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM-----LEGLEKLEI 508
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
+DL N++ + G + L++L L N +
Sbjct: 509 LDLQHNNLA------------------RLWKHANPGGPIYFLKGLSHLHILNLESNGFDE 550
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
L +L++ +DL N L+ + F + SL
Sbjct: 551 IPVEVFKDLFELKI------------------------IDLGLNNLNTLPASVFNNQVSL 586
Query: 474 RNLSLASNELISVIPSTFW-NLKDILYLNLSSNSLTGPLP 512
++L+L N + SV F +++ L++ N
Sbjct: 587 KSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 5e-11
Identities = 15/113 (13%), Positives = 32/113 (28%)
Query: 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQL 113
+ LN+ +L L+ + L N + N +LK L+ N +
Sbjct: 537 HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLI 596
Query: 114 SGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGI 166
+ L++ N F S ++ + + +
Sbjct: 597 TSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHY 649
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 307 bits (789), Expect = 3e-93
Identities = 111/583 (19%), Positives = 202/583 (34%), Gaps = 51/583 (8%)
Query: 59 NISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118
L+ IP L S ++L L N +S F+ L++L ++
Sbjct: 13 QCMELNFY-KIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIED 69
Query: 119 TNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEE 178
+L +L L+ N A S + L+ L + A IG+L L+E
Sbjct: 70 -GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKE 128
Query: 179 LYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV 238
L ++ N +Q ++P NL NLE L L NK+ +
Sbjct: 129 LNVAHNLIQSF------------------------KLPEYFSNLTNLEHLDLSSNKIQSI 164
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPY--VRLPNLEELYLWGNHFSGSIPNFIFNA- 295
++ + + + L + + I + L +L L N S ++
Sbjct: 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGL 224
Query: 296 SKLSRLELQKNSFSGFI---PSTFGNLRNLKRLGLNNNHLTSLTLELSFL-SSLSNCKYL 351
+ L L F L L L + L L L + + +
Sbjct: 225 AGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNV 284
Query: 352 EFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNL 411
L S +I+ + + + + ++ +C ++ +L L +
Sbjct: 285 SSFSLVSVTIERVKD----FSYNFGWQHLELVNCKFGQFPTLKLKSLKRLT-----FTSN 335
Query: 412 NGSIPITLGKLQKLQVLYFPDNKL--EGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGD 469
G + L L+ L N L +G + LDLS N + + + F
Sbjct: 336 KGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLG 394
Query: 470 LASLRNLSLASNELISVIP-STFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSM 528
L L +L + L + S F +L++++YL++S L L + +
Sbjct: 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 454
Query: 529 NNFSGVI-PNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSL 587
N+F P+ +++L FL L L+ P +F L SL+ LN+S+NN
Sbjct: 455 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY 514
Query: 588 EKLSYLKDLNLSFNKLEGEIPK--GGSFGNFSAESFEGNKLLC 628
+ L+ L+ L+ S N + + + + + N C
Sbjct: 515 KCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 557
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 5e-82
Identities = 117/568 (20%), Positives = 188/568 (33%), Gaps = 79/568 (13%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
L ++ + LSSLQ L + F I ++ TLK L+ N +
Sbjct: 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 140
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI----LRLSYNDFAGGIPKEIGNL 173
SNL E L+LS N + L + + L LS N I
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM-NFIQPGAFKE 199
Query: 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233
+L +L L N + I L LEV L L
Sbjct: 200 IRLHKLTLRNNFDSLN------------------------VMKTCIQGLAGLEVHRLVLG 235
Query: 234 KLVGVIPAEIFNMSTIQGVG------LQNNSLSGSLQSIPYV--RLPNLEELYLWGNHFS 285
+ E F+ S ++G+ + L L I + L N+ L
Sbjct: 236 EFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE 295
Query: 286 GSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL 345
+ +F +N LEL F F +L+ L + S
Sbjct: 296 R-VKDFSYN-FGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF----------SE 343
Query: 346 SNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFY 405
+ LEF+DLS N + + G + T+L
Sbjct: 344 VDLPSLEFLDLSRNGL------------------------SFKGCCSQSDFGTTSLKYLD 379
Query: 406 LGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEV-CRLAKVYQLDLSNNKLSGSIP 464
L N + + L++L+ L F + L+ V L + LD+S+ +
Sbjct: 380 LSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 438
Query: 465 ACFGDLASLRNLSLASNELI-SVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523
F L+SL L +A N + +P F L+++ +L+LS L P +L L
Sbjct: 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498
Query: 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM-SLKSLNLSNNNLSGS 582
++ S NNF + + LQ L N + S SL LNL+ N+ + +
Sbjct: 499 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 558
Query: 583 IPVS--LEKLSYLKDLNLSFNKLEGEIP 608
L+ + + L + ++E P
Sbjct: 559 CEHQSFLQWIKDQRQLLVEVERMECATP 586
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 3e-25
Identities = 34/201 (16%), Positives = 77/201 (38%), Gaps = 5/201 (2%)
Query: 51 HSHRVTALNISHLSLSGTIP-SRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFG 109
++ L+ H +L S +L +L L + + + +L++L
Sbjct: 394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 453
Query: 110 DNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKE 169
N +I + L L+LS+ P+A ++ + L++L +S+N+F
Sbjct: 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFP 513
Query: 170 IGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHN-FSKCEIPNE--IGNLRNLE 226
L L+ L S N + + F+ + N F+ C ++ + +++
Sbjct: 514 YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA-CTCEHQSFLQWIKDQR 572
Query: 227 VLALGLNKLVGVIPAEIFNMS 247
L + + ++ P++ M
Sbjct: 573 QLLVEVERMECATPSDKQGMP 593
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 295 bits (757), Expect = 3e-92
Identities = 88/298 (29%), Positives = 134/298 (44%), Gaps = 31/298 (10%)
Query: 343 SSLSNCKYLEFIDLSSNSIDGILS-RKSVGNLSHSLKIFDMSDCN-VSGSIPEEIGNLTN 400
+ + + +DLS ++ S+ NL L + N + G IP I LT
Sbjct: 44 DTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQ 102
Query: 401 LIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460
L Y+ N++G+IP L +++ L L F N L G++P + L + + N++S
Sbjct: 103 LHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162
Query: 461 GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKV 520
G+IP +G + L + +S N LTG +P NL
Sbjct: 163 GAIPDSYGSFSKLFT-----------------------SMTISRNRLTGKIPPTFANLN- 198
Query: 521 LVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLS 580
L +D S N G G K+ Q + L N L + G +L L+L NN +
Sbjct: 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIY 257
Query: 581 GSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPC 638
G++P L +L +L LN+SFN L GEIP+GG+ F ++ NK LCGSP +P C
Sbjct: 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP---LPAC 312
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 240 bits (614), Expect = 5e-72
Identities = 92/416 (22%), Positives = 135/416 (32%), Gaps = 120/416 (28%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCN--WTGVTCDV--HSHRVTALNISHLSL 65
D AL +K + N T +W + CN W GV CD ++RV L++S L+L
Sbjct: 6 QDKQALLQIKKDLGNPTT---LSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 66 SGT--IPSRLGNLSSLQSLFLHS-NQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNIC 122
IPS L NL L L++ N G IP +I
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK----------------------L 100
Query: 123 SNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLS 182
+ L L ++ G IP LS L L SYN +G +P I +L L +
Sbjct: 101 TQL---HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157
Query: 183 FNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL-EVLALGLNKLVGVIPA 241
N + G IP+ G+ L + + N+L G IP
Sbjct: 158 GNRISG-------------------------AIPDSYGSFSKLFTSMTISRNRLTGKIPP 192
Query: 242 EIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRL 301
N+ NL + L N G + ++
Sbjct: 193 TFANL--------------------------NLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 302 ELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI 361
L KNS + + G +NL L L NN + + L+ K+L +++S N
Sbjct: 227 HLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYG-----TLPQGLTQLKFLHSLNVSFN-- 278
Query: 362 DGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI 417
N+ G IP+ GNL N P+
Sbjct: 279 ------------------------NLCGEIPQG-GNLQRFDVSAYANNKCLCGSPL 309
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 221 bits (565), Expect = 3e-65
Identities = 79/353 (22%), Positives = 133/353 (37%), Gaps = 64/353 (18%)
Query: 142 IPSALSNCTYLR----ILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQI 197
I L N T L + G + ++ L LS L Y
Sbjct: 14 IKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY------- 66
Query: 198 FVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLAL-GLNKLVGVIPAEIFNMSTIQGVGLQN 256
IP+ + NL L L + G+N LVG IP I
Sbjct: 67 ----------------PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK----------- 99
Query: 257 NSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTF 316
L L LY+ + SG+IP+F+ L L+ N+ SG +P +
Sbjct: 100 --------------LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Query: 317 GNLRNLKRLGLNNNHLT-SLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375
+L NL + + N ++ ++ S L + +S N + G + + NL
Sbjct: 146 SSLPNLVGITFDGNRISGAIPDSYGSFSKL-----FTSMTISRNRLTGKIPP-TFANL-- 197
Query: 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKL 435
+L D+S + G G+ N +L N+L + +G + L L +N++
Sbjct: 198 NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRI 256
Query: 436 EGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP 488
G++P + +L ++ L++S N L G IP G+L + A+N+ + P
Sbjct: 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSP 308
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 311 bits (797), Expect = 9e-92
Identities = 97/673 (14%), Positives = 197/673 (29%), Gaps = 112/673 (16%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCNW------------TGVTCDVHSHRVTA 57
D AL A+ + +++ N++I NW GV D ++ RVT
Sbjct: 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLD-NNGRVTG 327
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
L+++ G +P +G L+ L+ L ++ + S T + +++
Sbjct: 328 LSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHY 387
Query: 118 PTNICSNLPFFESLNLSKNMFH-----GGIPSALSNCTYLRILRLSYNDFAGGIPKEIGN 172
+L ++ + I + N I K I
Sbjct: 388 KKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRI-TFISKAIQR 446
Query: 173 LTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL 232
LTKL+ +Y + + I V + NL++L + L
Sbjct: 447 LTKLQIIYFANSPFTY------DNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500
Query: 233 NKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG------ 286
+ +P +++ LP L+ L + N
Sbjct: 501 CPNMTQLPDFLYD-------------------------LPELQSLNIACNRGISAAQLKA 535
Query: 287 ---SIPNFIFNASKLSRLELQKNSFSGFIPS-TFGNLRNLKRLGLNNNHLTSLTLELSFL 342
+ + K+ + N+ F S + + L L +N + L
Sbjct: 536 DWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRH-------L 588
Query: 343 SSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE--EIGNLTN 400
+ L + L N I+ I + + ++ S + IP ++
Sbjct: 589 EAFGTNVKLTDLKLDYNQIEEI--PEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYV 645
Query: 401 LIGFYLGGNNL-----NGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455
+ N + N S + K + N+++ + + + + LS
Sbjct: 646 MGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILS 705
Query: 456 NNKLS-------GSIPACFGDLASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSL 507
NN ++ + + L + L N+L S+ L + +++S N
Sbjct: 706 NNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCF 765
Query: 508 TGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM 567
+ P + N L E N + P
Sbjct: 766 SS-FPTQPLNSSQLKAFGIRHQ------------------RDAEGNRILRQWPTGITTCP 806
Query: 568 SLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAE----SFEG 623
SL L + +N++ + L L L+++ N I A ++
Sbjct: 807 SLIQLQIGSNDIR-KVDEKL--TPQLYILDIADNPNI-SIDVTSVCPYIEAGMYVLLYDK 862
Query: 624 NKLLCGSPNLHVP 636
+ + G L +
Sbjct: 863 TQDIRGCDALGIE 875
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 286 bits (735), Expect = 1e-85
Identities = 116/559 (20%), Positives = 201/559 (35%), Gaps = 25/559 (4%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
N +L L+ IP L +S + L N + + L L Q+ I
Sbjct: 17 YNCENLGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW-I 72
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
+ + ++L L+ N +ALS L+ L + + N LE
Sbjct: 73 HEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLE 132
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL-V 236
LYL N + K + F +N ++ +L+ L+L LN +
Sbjct: 133 SLYLGSNHISSIKLPKGFP-TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191
Query: 237 GVIPAEIFNMSTIQGVGLQNNSLSG-SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295
I F+ + Q + + + + +L P
Sbjct: 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251
Query: 296 SKLS--RLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353
++S + LQK+ F +TF L+ L L HL+ L S L L+
Sbjct: 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELP------SGLVGLSTLKK 305
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEE-IGNLTNLIGFYLGGNNLN 412
+ LS+N + + S N SL + + + NL NL L +++
Sbjct: 306 LVLSANKFENLCQI-SASNFP-SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIE 363
Query: 413 GS--IPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGD 469
S + L L LQ L N+ + ++ LDL+ +L + F +
Sbjct: 364 TSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQN 423
Query: 470 LASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG---NLKVLVKIDF 526
L L+ L+L+ + L F L + +LNL N + L L +
Sbjct: 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVL 483
Query: 527 SMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVS 586
S + S + +A +K + + L +N L S ++ L + LNL++N++S +P
Sbjct: 484 SFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY-LNLASNHISIILPSL 542
Query: 587 LEKLSYLKDLNLSFNKLEG 605
L LS + +NL N L+
Sbjct: 543 LPILSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 5e-82
Identities = 105/538 (19%), Positives = 185/538 (34%), Gaps = 20/538 (3%)
Query: 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114
L S L + L +L L L Q + + H L L N L
Sbjct: 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI 94
Query: 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT 174
+ S + L + L N L L L N + +
Sbjct: 95 F-MAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTE 153
Query: 175 KLEELYLSFNGLQGAYDHGFLQIF-VKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233
KL+ L N + + N+ + + N I + + L G
Sbjct: 154 KLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPGAFDSAVFQSLNFGGT 212
Query: 234 KLVGVIPAEIFN--MSTIQGVGLQNNSLSG-SLQSIPYVRLPNLEELYLWGNHFSGSIPN 290
+ + VI + N + ++ ++ S + ++E + L ++F N
Sbjct: 213 QNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272
Query: 291 FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350
S L L+L S +PS L LK+L L+ N +L S SN
Sbjct: 273 TFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQ-----ISASNFPS 326
Query: 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCN--VSGSIPEEIGNLTNLIGFYLGG 408
L + + N+ L + NL +L+ D+S + S ++ NL++L L
Sbjct: 327 LTHLSIKGNTKRLELGTGCLENLE-NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSY 385
Query: 409 NNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEV-CRLAKVYQLDLSNNKLSGSIPACF 467
N + +L++L +L+ L + L+LS++ L S F
Sbjct: 386 NEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLF 445
Query: 468 GDLASLRNLSLASNELISVI---PSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKI 524
L +L++L+L N ++ L + L LS L+ +LK++ +
Sbjct: 446 DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505
Query: 525 DFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGS 582
D S N + A+ +K + L L N + +P L +++NL N L +
Sbjct: 506 DLSHNRLTSSSIEALSHLKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 249 bits (638), Expect = 5e-72
Identities = 89/522 (17%), Positives = 162/522 (31%), Gaps = 44/522 (8%)
Query: 104 KLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFA 163
K + + L+ EIP + ++ E L S N+ + S L L L+
Sbjct: 15 KTYNCENLGLN-EIPGTLPNST---ECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIY 70
Query: 164 GGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLR 223
+ +L+ L L+ N L + +
Sbjct: 71 WIHEDTFQSQHRLDTLVLTANPLIFM-------------------------AETALSGPK 105
Query: 224 NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNH 283
L+ L + + + N T++ + L +N +S S++ L+ L N
Sbjct: 106 ALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS-SIKLPKGFPTEKLKVLDFQNNA 164
Query: 284 FSGSIPNFIFNASKLSRLELQKNS-FSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFL 342
+ + + + L L N I + + L + +
Sbjct: 165 IHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKN 224
Query: 343 SSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLI 402
S++ + L + I G S++ ++ + L
Sbjct: 225 STIQS---LWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQ 281
Query: 403 GFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGS 462
L +L+ +P L L L+ L NK E + L + N
Sbjct: 282 ELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLE 340
Query: 463 I-PACFGDLASLRNLSLASNEL--ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLK 519
+ C +L +LR L L+ +++ NL + LNLS N
Sbjct: 341 LGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP 400
Query: 520 VLVKIDFSMNNFSGVIP-NAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNN 578
L +D + + + L+ L L +++L S F L +L+ LNL N+
Sbjct: 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNH 460
Query: 579 LSGSIPV---SLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
SL+ L L+ L LSF L +F +
Sbjct: 461 FPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ--HAFTSLK 500
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 243 bits (622), Expect = 8e-70
Identities = 109/535 (20%), Positives = 191/535 (35%), Gaps = 28/535 (5%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
L ++ L + L +L+ LF S + N TL+ L G N +S I
Sbjct: 86 LVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISS-I 144
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI--LRLSYNDFAGGIPKEIGNLTK 175
+ L+ N H +S+ L L+ ND GI +
Sbjct: 145 KLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI-AGIEPGAFDSAV 203
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFV-QFSHNFSKCEIPNEIGNLR--NLEVLALGL 232
+ L G ++++++ F + P L ++E + L
Sbjct: 204 FQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQK 263
Query: 233 NKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPY--VRLPNLEELYLWGNHFSGSIPN 290
+ + S +Q + L LS +P V L L++L L N F
Sbjct: 264 HYFFNISSNTFHCFSGLQELDLTATHLS----ELPSGLVGLSTLKKLVLSANKFENLCQI 319
Query: 291 FIFNASKLSRLELQKNSFSGFIPS-TFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCK 349
N L+ L ++ N+ + + NL NL+ L L+++ + + L +LS+
Sbjct: 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSH-- 377
Query: 350 YLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGG 408
L+ ++LS N + ++ L++ D++ + + NL L L
Sbjct: 378 -LQSLNLSYNEPLSL-KTEAFKECP-QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSH 434
Query: 409 NNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEV---CRLAKVYQLDLSNNKLSGSIPA 465
+ L+ S L LQ L N + L ++ L LS LS
Sbjct: 435 SLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQH 494
Query: 466 CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKID 525
F L + ++ L+ N L S +LK +YLNL+SN ++ LP + L I+
Sbjct: 495 AFTSLKMMNHVDLSHNRLTSSSIEALSHLK-GIYLNLASNHISIILPSLLPILSQQRTIN 553
Query: 526 FSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLS 580
N N I L++ L+ + + L+ + LS+ LS
Sbjct: 554 LRQNPLDCTCSN----IYFLEWYKENMQKLEDTEDTLCENPPLLRGVRLSDVTLS 604
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 8e-52
Identities = 92/439 (20%), Positives = 164/439 (37%), Gaps = 24/439 (5%)
Query: 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFN--IHTLKLLSFGDN 111
+LN++ ++ I + + QSL Q I + N I +L L +F D
Sbjct: 180 TNLSLNLNGNDIA-GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDM 238
Query: 112 QLSGEIPTNICSNLPF--FESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKE 169
+I + L ES+NL K+ F + + L+ L L+ + +P
Sbjct: 239 DDE-DISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE-LPSG 296
Query: 170 IGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI-PNEIGNLRNLEVL 228
+ L+ L++L LS N + F + N + E+ + NL NL L
Sbjct: 297 LVGLSTLKKLVLSANKFEN-LCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLREL 355
Query: 229 ALGLNKL--VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG 286
L + + ++ N+S +Q + L N SL++ + P LE L L
Sbjct: 356 DLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPL-SLKTEAFKECPQLELLDLAFTRLKV 414
Query: 287 SIPNFIF-NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL 345
F N L L L + F L L+ L L NH ++ + +SL
Sbjct: 415 KDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKT--NSL 472
Query: 346 SNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFY 405
LE + LS + I + + +L + D+S ++ S E + +L +
Sbjct: 473 QTLGRLEILVLSFCDLSSI-DQHAFTSLK-MMNHVDLSHNRLTSSSIEALSHLKGIY-LN 529
Query: 406 LGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAK-VYQLDLSNNKLSGSIP 464
L N+++ +P L L + + + N L+ + C + + KL +
Sbjct: 530 LASNHISIILPSLLPILSQQRTINLRQNPLDCT-----CSNIYFLEWYKENMQKLEDTED 584
Query: 465 ACFGDLASLRNLSLASNEL 483
+ LR + L+ L
Sbjct: 585 TLCENPPLLRGVRLSDVTL 603
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 5e-32
Identities = 50/246 (20%), Positives = 86/246 (34%), Gaps = 9/246 (3%)
Query: 404 FYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSI 463
+ LN IP TL + L F N L RL + LDL+ ++
Sbjct: 17 YNCENLGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIH 73
Query: 464 PACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523
F L L L +N LI + + K + +L ++ + + N K L
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLES 133
Query: 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLK--SLNLSNNNLSG 581
+ N+ S + + L+ L + N + + L SLNL+ N+++
Sbjct: 134 LYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA- 192
Query: 582 SIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSA---ESFEGNKLLCGSPNLHVPPC 638
I + + LN + I KG + +FE SP + C
Sbjct: 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252
Query: 639 KTSIQH 644
+ S++
Sbjct: 253 EMSVES 258
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 273 bits (699), Expect = 2e-80
Identities = 104/562 (18%), Positives = 177/562 (31%), Gaps = 36/562 (6%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
LS +P + SS +++ L N +S N L+ L ++ I
Sbjct: 16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIET-I 71
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
L +L L+ N P + S T L L A IG L L+
Sbjct: 72 EDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLK 131
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL----EVLALGLN 233
+L ++ N + + + V S+N+ + N++ LR L + LN
Sbjct: 132 KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191
Query: 234 KLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293
+ I + F + + L+ N S ++ L L L F IF
Sbjct: 192 PI-DFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250
Query: 294 NASKLSRLE--------LQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL 345
S + L L + F L N+ + L + L +
Sbjct: 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYL-------EDV 303
Query: 346 SNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFY 405
+ + + + +L LK ++ GSI + L +L
Sbjct: 304 PKHFKWQSLSIIRCQLKQF----PTLDLPF-LKSLTLTMNK--GSISFKKVALPSLSYLD 356
Query: 406 LGGNNLNGSIPITL--GKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSI 463
L N L+ S + L+ L N + L ++ LD ++ L
Sbjct: 357 LSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVT 415
Query: 464 PA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI-GNLKVL 521
F L L L ++ F L + L ++ NS + N L
Sbjct: 416 EFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL 475
Query: 522 VKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSG 581
+D S + + LQ L + +N L + L SL +L+ S N +
Sbjct: 476 TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535
Query: 582 SIPVSLEKLSYLKDLNLSFNKL 603
S + L NL+ N +
Sbjct: 536 SKGILQHFPKSLAFFNLTNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 216 bits (551), Expect = 4e-60
Identities = 92/484 (19%), Positives = 163/484 (33%), Gaps = 43/484 (8%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
L ++ + P L+SL++L + + F I + TLK L+ N +
Sbjct: 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCK 144
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI----LRLSYNDFAGGIPKEIGNL 173
SNL ++LS N + L L +S N I +
Sbjct: 145 LPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPI-DFIQDQAFQG 203
Query: 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI------PNEIGNLRNLEV 227
KL EL L N LQ + K E P+ + L ++ +
Sbjct: 204 IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTI 263
Query: 228 LALGL--NKLVGVIPAEIFNMSTIQGVGLQNNSLSG------------------SLQSIP 267
L + ++ + + L S+ L+ P
Sbjct: 264 DEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFP 323
Query: 268 YVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNL--RNLKRL 325
+ LP L+ L L N S S LS L+L +N+ S ++ +L +L+ L
Sbjct: 324 TLDLPFLKSLTLTMNKGSISFKKV--ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHL 381
Query: 326 GLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDC 385
L+ N ++ L L + +D +++ + + +L L D+S
Sbjct: 382 DLSFNGAIIMSANFMGLEEL------QHLDFQHSTLKRVTEFSAFLSL-EKLLYLDISYT 434
Query: 386 NVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLYFPDNKLEGSIPDEVC 444
N LT+L + GN+ + L L +LE
Sbjct: 435 NTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494
Query: 445 RLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSS 504
L ++ L++S+N L + + L SL L + N + + K + + NL++
Sbjct: 495 TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTN 554
Query: 505 NSLT 508
NS+
Sbjct: 555 NSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 3e-33
Identities = 55/312 (17%), Positives = 100/312 (32%), Gaps = 18/312 (5%)
Query: 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQL 113
+ +++ + + L+++ ++ L + + LS QL
Sbjct: 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY--LEDVPKHFKWQSLSIIRCQL 319
Query: 114 SGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYN--DFAGGIPKEIG 171
+ PT L +SL L+ N G I L L LS N F+G
Sbjct: 320 K-QFPTLDLPFL---KSLTLTMN--KGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDL 373
Query: 172 NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHN-FSKCEIPNEIGNLRNLEVLAL 230
L L LSFNG + + F H+ + + +L L L +
Sbjct: 374 GTNSLRHLDLSFNGAII--MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDI 431
Query: 231 GLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPN 290
++++ + + NS + S + NL L L
Sbjct: 432 SYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWG 491
Query: 291 FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350
+L L + N+ S + L +L L + N + T + +
Sbjct: 492 VFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE--TSKGILQHFPKS--- 546
Query: 351 LEFIDLSSNSID 362
L F +L++NS+
Sbjct: 547 LAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 8e-33
Identities = 50/276 (18%), Positives = 89/276 (32%), Gaps = 18/276 (6%)
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
+ + ++ S K D+S + N + L L +
Sbjct: 16 YQCMDQKLSKVPD-----DIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIET 70
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
L L L N ++ P L + L KL+ G L +L
Sbjct: 71 IEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITL 130
Query: 474 RNLSLASNELISV-IPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLK----VLVKIDFSM 528
+ L++A N + S +P+ F NL ++++++LS N + ++ L+ V + +D S+
Sbjct: 131 KKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190
Query: 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP-DSFGDLMSLKSLNLSNNNLSGSIPVS- 586
N + A GIK L L L N +I +L L L +
Sbjct: 191 NPIDFIQDQAFQGIK-LHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEI 249
Query: 587 -----LEKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
+E L + F +
Sbjct: 250 FEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLA 285
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-23
Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 5/157 (3%)
Query: 461 GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKV 520
GS+ C + ++ +L V + K ++LS N L N
Sbjct: 2 GSLNPCIEVVPNIT-YQCMDQKLSKVPDDIPSSTK---NIDLSFNPLKILKSYSFSNFSE 57
Query: 521 LVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLS 580
L +D S + A G+ L L L N +Q P SF L SL++L L+
Sbjct: 58 LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA 117
Query: 581 GSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
+ +L LK LN++ N + F N +
Sbjct: 118 SLESFPIGQLITLKKLNVAHNFIHS-CKLPAYFSNLT 153
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 8e-18
Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 1/139 (0%)
Query: 51 HSHRVTALNISHLSLSGTIP-SRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFG 109
+ L+ H +L S +L L L + + +L L
Sbjct: 397 GLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMA 456
Query: 110 DNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKE 169
N +N+ +N L+LSK L++L +S+N+
Sbjct: 457 GNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSH 516
Query: 170 IGNLTKLEELYLSFNGLQG 188
L L L SFN ++
Sbjct: 517 YNQLYSLSTLDCSFNRIET 535
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 5e-05
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ 112
HR+ LN+SH +L S L SL +L N+ S +L + +N
Sbjct: 497 HRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNS 556
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMF 138
+ IC + F + + K
Sbjct: 557 V-----ACICEHQKFLQWVKEQKQFL 577
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 244 bits (624), Expect = 3e-73
Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 24/309 (7%)
Query: 693 WRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKS-FDV 751
+RFS EL A+D FS N++GRGGFG VYK R+ DG VAVK ++ + + F
Sbjct: 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQT 76
Query: 752 ECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLY---SSNYILDIFQ 808
E E++ HRN++++ C + L YM +GS+ L S LD +
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPT----ERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
R I + A L YL+ +IH D+K +N+LL + A + DFG+ KL+ +D VT
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 192
Query: 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF---NEGMTLKHW 925
T TIG++A EY S G+ S DV+ +GVML+E TG++ + ++ + L W
Sbjct: 193 -TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 926 VNDWLLIS---IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
V L+ + +VD L ++ + + +A+ CT SP +R E+V
Sbjct: 252 V--KGLLKEKKLEALVDVDLQGNYK------DEEVEQLIQVALLCTQSSPMERPKMSEVV 303
Query: 983 TRLLKINDL 991
R+L+ + L
Sbjct: 304 -RMLEGDGL 311
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 237 bits (608), Expect = 5e-71
Identities = 90/298 (30%), Positives = 150/298 (50%), Gaps = 20/298 (6%)
Query: 694 RRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVEC 753
R ++L +AT+ F LIG G FG VYK ++DG +VA+K + + + F+ E
Sbjct: 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEI 86
Query: 754 EVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN---YILDIFQRL 810
E + RH +++ +I C + L +YM +G+L+++LY S+ + QRL
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERN----EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 811 NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ-FVTQ 869
I I A L YL+ +IH D+K N+LL +N V ++DFGI+K T DQ ++
Sbjct: 143 EICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS- 198
Query: 870 TQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT-LKHWVND 928
T T+GY+ EY +GR++ DVY+FGV+L E + + M L W +
Sbjct: 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 929 WLLIS-IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+ +IVD +L + + + K + A++C S E R + +++ +L
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRK------FGDTAVKCLALSSEDRPSMGDVLWKL 310
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 219 bits (561), Expect = 9e-62
Identities = 108/561 (19%), Positives = 192/561 (34%), Gaps = 53/561 (9%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
L+ IP L S ++L L N +S F+ L++L ++
Sbjct: 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ- 65
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
I +L +L L+ N A S + L+ L + A IG+L
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
L+EL ++ N +Q ++P NL NLE L L NK+
Sbjct: 126 LKELNVAHNLIQ------------------------SFKLPEYFSNLTNLEHLDLSSNKI 161
Query: 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYV--RLPNLEELYLWGNHFSGSIPNFIF 293
+ ++ + + + L + + I + L +L L N S ++
Sbjct: 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCI 221
Query: 294 NA-SKLSRLELQKNSFSG------FIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
+ L L F F S L NL +L ++ +
Sbjct: 222 QGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDII--DLFN 279
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYL 406
+ L S +I+ + L++ + L +L
Sbjct: 280 CLTNVSSFSLVSVTIERVKDFSYNFGW-QHLELVNCKFGQFPT------LKLKSLKRLTF 332
Query: 407 GGNNLNGSIPITLGKLQKLQVLYFPDNKLE--GSIPDEVCRLAKVYQLDLSNNKLSGSIP 464
N + + L L+ L N L G + LDLS N + ++
Sbjct: 333 TSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMS 389
Query: 465 ACFGDLASLRNLSLASNELISVIP-STFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523
+ F L L +L + L + S F +L++++YL++S L L
Sbjct: 390 SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449
Query: 524 IDFSMNNFSGVI-PNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGS 582
+ + N+F P+ +++L FL L L+ P +F L SL+ LN+++N L
Sbjct: 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509
Query: 583 IPVSLEKLSYLKDLNLSFNKL 603
++L+ L+ + L N
Sbjct: 510 PDGIFDRLTSLQKIWLHTNPW 530
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 8e-50
Identities = 107/490 (21%), Positives = 164/490 (33%), Gaps = 54/490 (11%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
L ++ + LSSLQ L + F I ++ TLK L+ N +
Sbjct: 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 140
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI----LRLSYNDFAGGIPKEIGNL 173
SNL E L+LS N + L + + L LS N I
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKE 199
Query: 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233
+L +L L N + I L LEV L L
Sbjct: 200 IRLHKLTLRNNFDSLN------------------------VMKTCIQGLAGLEVHRLVLG 235
Query: 234 KLVGVIPAEIFNMSTIQGV------GLQNNSLSGSLQSIPYV--RLPNLEELYLWGNHFS 285
+ E F+ S ++G+ + L L I + L N+ L
Sbjct: 236 EFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE 295
Query: 286 GSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL 345
+ +F +N LEL F F L++LKRL +N + S
Sbjct: 296 -RVKDFSYN-FGWQHLELVNCKFGQF---PTLKLKSLKRLTFTSNKGGN-------AFSE 343
Query: 346 SNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFY 405
+ LEF+DLS N + + SLK D+S V ++ L L
Sbjct: 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 402
Query: 406 LGGNNLNGSIP-ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIP 464
+NL L+ L L + L+ + L ++ N +
Sbjct: 403 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 462
Query: 465 A-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI-GNLKVLV 522
F +L +L L L+ +L + P+ F +L + LN++SN L +P I L L
Sbjct: 463 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQ 521
Query: 523 KIDFSMNNFS 532
KI N +
Sbjct: 522 KIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 5e-42
Identities = 86/417 (20%), Positives = 154/417 (36%), Gaps = 33/417 (7%)
Query: 214 EIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPN 273
+IP+ + + + L L N L + F+ +Q + L + +++ Y L +
Sbjct: 21 KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSH 77
Query: 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
L L L GN S L +L + + + G+L+ LK L + +N +
Sbjct: 78 LSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ 137
Query: 334 SLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSR--KSVGNLSHSLKIFDMSDCNVSGSI 391
S L F SN LE +DLSSN I I + + + D+S ++ I
Sbjct: 138 SFKLPEYF----SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FI 192
Query: 392 PEEIGNLTNLIGFYLGGNNLNGSIPIT-LGKLQKLQVL------YFPDNKLEGSIPDEVC 444
L L N + ++ T + L L+V + + LE +
Sbjct: 193 QPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALE 252
Query: 445 RLAKVYQLDLSNNKLSGS---IPACFGDLASLRNLSLASNELISVIPSTF-WNLKDILYL 500
L + + L I F L ++ + SL S + V ++ + + + +
Sbjct: 253 GLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELV 312
Query: 501 NLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ--GS 558
N LK L ++ F+ N + L+FL L N L G
Sbjct: 313 NCKFGQFPT------LKLKSLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLSFKGC 364
Query: 559 IPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGN 615
S SLK L+LS N + ++ + L L+ L+ + L+ ++ + F +
Sbjct: 365 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLS 419
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 3e-26
Identities = 53/262 (20%), Positives = 90/262 (34%), Gaps = 18/262 (6%)
Query: 355 DLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGS 414
+ I NL S K D+S + + L L +
Sbjct: 13 QCMELNFYKIPD-----NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI 67
Query: 415 IPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474
L L L N ++ L+ + +L L+ G L +L+
Sbjct: 68 EDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127
Query: 475 NLSLASNELISV-IPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVL----VKIDFSMN 529
L++A N + S +P F NL ++ +L+LSSN + ++ L + + +D S+N
Sbjct: 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187
Query: 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLMSLKSLNL------SNNNLSGS 582
+ + P A I+ L L L N ++ L L+ L + NL
Sbjct: 188 PMNFIQPGAFKEIR-LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKF 246
Query: 583 IPVSLEKLSYLKDLNLSFNKLE 604
+LE L L L+
Sbjct: 247 DKSALEGLCNLTIEEFRLAYLD 268
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 7e-17
Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 4/138 (2%)
Query: 480 SNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAI 539
+ + ++ K L+LS N L + L +D S + A
Sbjct: 16 ELNFYKIPDNLPFSTK---NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY 72
Query: 540 GGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLS 599
+ L L L N +Q +F L SL+ L NL+ + L LK+LN++
Sbjct: 73 QSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 132
Query: 600 FNKLEGEIPKGGSFGNFS 617
N ++ F N +
Sbjct: 133 HNLIQ-SFKLPEYFSNLT 149
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 2e-06
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Query: 58 LNISHLSLSGTIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIFNIHT-LKLLSFGDNQLSG 115
L ++ S L +L L L Q + + FN + L++L+ NQL
Sbjct: 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMASNQLK- 507
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSAL 146
+P I L + + L N + P
Sbjct: 508 SVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 211 bits (538), Expect = 2e-61
Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 20/312 (6%)
Query: 696 FSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEV 755
L + + RG FG V+KA++ VAVK+F Q ++++ + E
Sbjct: 14 LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQ-NEYEVYS 71
Query: 756 MKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMID 815
+ ++H NI++ I G + L + GSL +L ++ + +I
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAET 129
Query: 816 VASALEYL------YFGYSTP-VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
+A L YL P + H D+K NVLL +N+ A ++DFG+
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGD 189
Query: 869 QTQTPATIGYMALEYGSEGRVSTNG------DVYNFGVMLMETFTGKKPTNEIFNEGMT- 921
T YMA E EG ++ D+Y G++L E + + +E M
Sbjct: 190 THGQVGTRRYMAPEVL-EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP 248
Query: 922 LKHWVNDWLLISIMKIVDGSLLSREDI-QFVAKEQCMSFVFNMAMECTVESPEKRINAKE 980
+ + + M+ V R + + K M+ + EC E R++A
Sbjct: 249 FEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGC 308
Query: 981 IVTRLLKINDLD 992
+ R+ ++ L
Sbjct: 309 VGERITQMQRLT 320
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 204 bits (522), Expect = 2e-59
Identities = 83/308 (26%), Positives = 133/308 (43%), Gaps = 35/308 (11%)
Query: 694 RRFSYLELCQATDGFSE------NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRA-- 745
FS+ EL T+ F E N +G GGFG VYK + + VAVK
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 71
Query: 746 --FKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY- 802
+ FD E +VM +H N+++++ S GD L YMP+GSL L +
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCL----VYVYMPNGSLLDRLSCLDGT 127
Query: 803 -ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861
L R I A+ + +L+ IH D+K +N+LL + A +SDFG+ +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT 921
+ Q V ++ T YMA E G ++ D+Y+FGV+L+E TG +E +
Sbjct: 185 KFAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL- 242
Query: 922 LKHWVNDWLLIS----IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN 977
L + I +D + + + ++++A +C E KR +
Sbjct: 243 LLDIK--EEIEDEEKTIEDYIDKKMN-----DADSTS--VEAMYSVASQCLHEKKNKRPD 293
Query: 978 AKEIVTRL 985
K++ L
Sbjct: 294 IKKVQQLL 301
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 9e-58
Identities = 98/528 (18%), Positives = 191/528 (36%), Gaps = 72/528 (13%)
Query: 81 SLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHG 140
+ + + + G ++ + + +L +
Sbjct: 6 ATITQDTPINQIFTDT--ALAEKMKTVLGKTNVTDTVSQTDLDQV---TTLQADRL--GI 58
Query: 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVK 200
+ L + S N P + NLTKL ++ ++ N +
Sbjct: 59 KSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD------------ 104
Query: 201 NIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260
+ NL NL L L N++ + P + N++ + + L +N++S
Sbjct: 105 ---------------ITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS 147
Query: 261 GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLR 320
+ ++ L +L++L GN + P + N + L RL++ N S S L
Sbjct: 148 -DISALSG--LTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLT 199
Query: 321 NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIF 380
NL+ L NN ++ + + L L+ + L+ N + I ++ +L+ +L
Sbjct: 200 NLESLIATNNQISDI-------TPLGILTNLDELSLNGNQLKDI---GTLASLT-NLTDL 248
Query: 381 DMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIP 440
D+++ +S P + LT L LG N ++ P L L L L +N+LE P
Sbjct: 249 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304
Query: 441 DEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYL 500
+ L + L L N +S P L L+ L +N++ S+ NL +I +L
Sbjct: 305 --ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWL 358
Query: 501 NLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP 560
+ N ++ P + NL + ++ + ++ N + + L P
Sbjct: 359 SAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGAL--IAP 414
Query: 561 DSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608
+ D S +++ N S + VS S + G +
Sbjct: 415 ATISDGGSYTEPDITWNLPSYTNEVSYT-FSQPVTIGKGTTTFSGTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 4e-57
Identities = 102/535 (19%), Positives = 178/535 (33%), Gaps = 71/535 (13%)
Query: 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQL 113
+ + I+ + I + L+ L + ++ + ++ + L +
Sbjct: 2 PLGSATITQDTPINQIFT-DTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGI 58
Query: 114 SGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNL 173
+NL +N S N + L N T L + ++ N A + NL
Sbjct: 59 KSIDGVEYLNNL---TQINFSNNQLTD--ITPLKNLTKLVDILMNNNQIAD--ITPLANL 111
Query: 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233
T L L L N + + + NL NL L L N
Sbjct: 112 TNLTGLTLFNNQITD---------------------------IDPLKNLTNLNRLELSSN 144
Query: 234 KLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293
+ + + ++++Q + N P L LE L + N S + +
Sbjct: 145 TISDISA--LSGLTSLQQLSFGNQVTD----LKPLANLTTLERLDISSNKVSD--ISVLA 196
Query: 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353
+ L L N S P G L NL L LN N L + +L++ L
Sbjct: 197 KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-------IGTLASLTNLTD 247
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
+DL++N I + + L+ L + +S P + LT L L N L
Sbjct: 248 LDLANNQISNL---APLSGLT-KLTELKLGANQISNISP--LAGLTALTNLELNENQLED 301
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
PI L+ L L N + P V L K+ +L NNK+S +L ++
Sbjct: 302 ISPI--SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSS--LANLTNI 355
Query: 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533
LS N++ + P NL I L L+ + T N+ + + +
Sbjct: 356 NWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTV--KNVTGAL 411
Query: 534 VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLE 588
+ P I + +N+ + ++ SG++ L+
Sbjct: 412 IAPATISDGGSYTEPDITWNLPS-YTNEVSYTFSQPVTIGKGTTTFSGTVTQPLK 465
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 194 bits (496), Expect = 6e-54
Identities = 101/483 (20%), Positives = 184/483 (38%), Gaps = 67/483 (13%)
Query: 144 SALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIF 203
+ L + + +L ++ L G++
Sbjct: 18 FTDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK---------------- 59
Query: 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL 263
+ + L NL + N+L + P + N++ + + + NN ++
Sbjct: 60 -----------SIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI- 105
Query: 264 QSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLK 323
P L NL L L+ N + P + N + L+RLEL N+ S L +L+
Sbjct: 106 --TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISA--LSGLTSLQ 159
Query: 324 RLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMS 383
+L N ++ L L+N LE +D+SSN + I + L+ +L+ +
Sbjct: 160 QLSFGNQ--------VTDLKPLANLTTLERLDISSNKVSDI---SVLAKLT-NLESLIAT 207
Query: 384 DCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEV 443
+ +S P +G LTNL L GN L TL L L L +N++ P +
Sbjct: 208 NNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--L 261
Query: 444 CRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503
L K+ +L L N++S P L +L NL L N+L + P NLK++ YL L
Sbjct: 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317
Query: 504 SNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSF 563
N+++ P+ +L L ++ F N S V + + ++ +L +N + P
Sbjct: 318 FNNISDISPV--SSLTKLQRLFFYNNKVSDVSS--LANLTNINWLSAGHNQISDLTP--L 371
Query: 564 GDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEG 623
+L + L L++ + + +S + + G+++
Sbjct: 372 ANLTRITQLGLNDQAWTNAPVNYKANVSIP-NTVKNVTGALIAPATISDGGSYTEPDITW 430
Query: 624 NKL 626
N
Sbjct: 431 NLP 433
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 206 bits (525), Expect = 2e-55
Identities = 123/631 (19%), Positives = 215/631 (34%), Gaps = 78/631 (12%)
Query: 47 TCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKL 105
+C +L+ +P L++ + L L N ++ S F + L+L
Sbjct: 1 SCSFDGRIA---FYRFCNLT-QVPQ---VLNTTERLLLSFNYIR-TVTASSFPFLEQLQL 52
Query: 106 LSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGG 165
L G I NLP L+L + + P A +L LRL + +
Sbjct: 53 LELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDA 112
Query: 166 I--PKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLR 223
+ NL L L LS N + G L
Sbjct: 113 VLKDGYFRNLKALTRLDLSKN------------------------QIRSLYLHPSFGKLN 148
Query: 224 NLEVLALGLNKLVGVIPAEIFN---MSTIQGVGLQNNSLS-----GSLQSIPYVRLPNLE 275
+L+ + N++ ++ T+ L NSL + + R LE
Sbjct: 149 SLKSIDFSSNQIF-LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207
Query: 276 ELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335
L + GN ++ I N+ S + ++ G +++
Sbjct: 208 ILDVSGNGWTVDITG------------NFSNAISKSQAFSLILAHHIMGAGFGFHNIKDP 255
Query: 336 TLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI 395
+ + L+ + +DLS + + SR L LK+ +++ ++ E
Sbjct: 256 DQ--NTFAGLARS-SVRHLDLSHGFVFSLNSR-VFETLK-DLKVLNLAYNKINKIADEAF 310
Query: 396 GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455
L NL L N L L K+ + N + L K+ LDL
Sbjct: 311 YGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLR 370
Query: 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI 515
+N L+ + S+ ++ L+ N+L++ +P ++LS N L L
Sbjct: 371 DNALT-----TIHFIPSIPDIFLSGNKLVT-LPKINLTAN---LIHLSENRLENLDILYF 421
Query: 516 -GNLKVLVKIDFSMNNFSGVIPNAI-GGIKDLQFLFLEYNILQGSI-----PDSFGDLMS 568
+ L + + N FS + L+ LFL N+LQ + D F L
Sbjct: 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481
Query: 569 LKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLC 628
L+ L L++N L+ P L+ L+ L+L+ N+L + N N+LL
Sbjct: 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHNDLPANLEILDISRNQLLA 540
Query: 629 GSPNLHVPPCKTSIQHTRRKNTILLGIFLPL 659
+P++ V I H + L F+
Sbjct: 541 PNPDVFVSLSVLDITHNKFICECELSTFINW 571
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 2e-17
Identities = 59/355 (16%), Positives = 118/355 (33%), Gaps = 46/355 (12%)
Query: 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ 112
+V +++ ++ L LQ+L L N + +I I ++ + N+
Sbjct: 338 PKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNK 392
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEI- 170
L + ++LS+N I L +L+IL L+ N F+ +
Sbjct: 393 L-----VTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTP 447
Query: 171 GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSH----NFSKCEI----PNEIGNL 222
LE+L+L N LQ A++ ++F SH + + P +L
Sbjct: 448 SENPSLEQLFLGENMLQLAWETELC----WDVFEGLSHLQVLYLNHNYLNSLPPGVFSHL 503
Query: 223 RNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGN 282
L L+L N+L V+ + ++ + + N L + +L L + N
Sbjct: 504 TALRGLSLNSNRLT-VLSHNDL-PANLEILDISRNQLL----APNPDVFVSLSVLDITHN 557
Query: 283 HFSGSIPNFIF----------------NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLG 326
F F + + S LK L
Sbjct: 558 KFICECELSTFINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTEGCDEEEVLKSLK 617
Query: 327 LNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFD 381
+ + ++TL L ++ L+ K+ F + + ++ + + +D
Sbjct: 618 FSLFIVCTVTLTLFLMTILTVTKFRGFCFICYKTAQRLVFKDHPQGTEPDMYKYD 672
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 2e-54
Identities = 99/535 (18%), Positives = 178/535 (33%), Gaps = 109/535 (20%)
Query: 69 IPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFF 128
I R + + LQ HS+ + +P N+ + ++ P
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGN-GEQREM 60
Query: 129 ESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQG 188
L + L L+ +P+ + LE L S N L
Sbjct: 61 AVSRLRDCL-----------DRQAHELELNNLGL-SSLPELPPH---LESLVASCNSLT- 104
Query: 189 AYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMST 248
E+P +L++L V L L + P
Sbjct: 105 -------------------------ELPELPQSLKSLLVDNNNLKALSDLPP-------L 132
Query: 249 IQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSF 308
++ +G+ NN L L + L+ + + N +P+ + L + N
Sbjct: 133 LEYLGVSNNQLE-KLPELQ--NSSFLKIIDVDNNSLK-KLPDLPPS---LEFIAAGNNQL 185
Query: 309 SGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRK 368
+P NL L + +NN L L L S+ +N ++ +
Sbjct: 186 E-ELPE-LQNLPFLTAIYADNNSLKKLPDLPLSLESI---------VAGNNILEEL---P 231
Query: 369 SVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVL 428
+ NL L + + ++P+ +L L + N L +P L L V
Sbjct: 232 ELQNLP-FLTTIYADNNLLK-TLPDLPPSLEAL---NVRDNYLT-DLPELPQSLTFLDVS 285
Query: 429 YFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP 488
+ L P +Y L+ S+N++ S+ SL L++++N+LI +P
Sbjct: 286 ENIFSGLSELPP-------NLYYLNASSNEIR-SLC---DLPPSLEELNVSNNKLIE-LP 333
Query: 489 STFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFL 548
+ L+ L S N L +P NLK L N P+ ++DL+
Sbjct: 334 ALPPRLE---RLIASFNHLAE-VPELPQNLKQL---HVEYNPLR-EFPDIPESVEDLRM- 384
Query: 549 FLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603
N +P+ +LK L++ N L P E ++DL ++ ++
Sbjct: 385 ----NSHLAEVPEL---PQNLKQLHVETNPLR-EFPDIPES---VEDLRMNSERV 428
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 2e-51
Identities = 103/536 (19%), Positives = 183/536 (34%), Gaps = 108/536 (20%)
Query: 68 TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPF 127
+P N+ S + +++ + P + + + +
Sbjct: 25 EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVS---------RLRDCLDRQA-- 73
Query: 128 FESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187
L L+ +P + L L S N +P+ +L L + L
Sbjct: 74 -HELELNNLGLS-SLPELPPH---LESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALS 127
Query: 188 GAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMS 247
++P LE L + N+L +P E+ N S
Sbjct: 128 --------------------------DLPP------LLEYLGVSNNQLE-KLP-ELQNSS 153
Query: 248 TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNS 307
++ + + NNSL +P P+LE + N +P N L+ + NS
Sbjct: 154 FLKIIDVDNNSLK----KLP-DLPPSLEFIAAGNNQLE-ELPELQ-NLPFLTAIYADNNS 206
Query: 308 FSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSR 367
+L+ + NN L L L N +L I +N +
Sbjct: 207 LKKLPDL----PLSLESIVAGNNILEE-------LPELQNLPFLTTIYADNNLL------ 249
Query: 368 KSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQV 427
K++ +L SL+ ++ D ++ +PE +LT L + L+ P L
Sbjct: 250 KTLPDLPPSLEALNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPP-------NLYY 301
Query: 428 LYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVI 487
L N++ S+ D L + L++SNNKL +PA L L + N L +
Sbjct: 302 LNASSNEIR-SLCDLPPSLEE---LNVSNNKLI-ELPALPP---RLERLIASFNHLAE-V 352
Query: 488 PSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQF 547
P NLK L++ N L P +++ L MN+ +P L+
Sbjct: 353 PELPQNLK---QLHVEYNPLRE-FPDIPESVEDL-----RMNSHLAEVPELPQN---LKQ 400
Query: 548 LFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603
L +E N L+ PD S++ L +++ + + E L+D +
Sbjct: 401 LHVETNPLR-EFPDI---PESVEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 8e-45
Identities = 91/484 (18%), Positives = 156/484 (32%), Gaps = 113/484 (23%)
Query: 166 IPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL 225
I + T L+E + L E+P E N+++
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT--------------------------EMPVEAENVKSK 36
Query: 226 EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSG---------SLQSIPYVRLPNLEE 276
++ P + L++ L S+P + P+LE
Sbjct: 37 TEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL-PPHLES 95
Query: 277 LYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPS---------------TFGNLRN 321
L N + +P + L + S P N
Sbjct: 96 LVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSF 154
Query: 322 LKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFD 381
LK + ++NN L L + LEFI +N ++ + + NL L
Sbjct: 155 LKIIDVDNNSLKKL------PDLPPS---LEFIAAGNNQLEEL---PELQNLP-FLTAIY 201
Query: 382 MSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPD 441
+ ++ +P+ +L ++ G N L L L L +Y +N L+ ++PD
Sbjct: 202 ADNNSLK-KLPDLPLSLESI---VAGNNIL--EELPELQNLPFLTTIYADNNLLK-TLPD 254
Query: 442 EVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLN 501
L L++ +N L+ +P L L + L + P+ + YLN
Sbjct: 255 LPPSLEA---LNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPPN-------LYYLN 303
Query: 502 LSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD 561
SSN + L +L+ L + S N +P L+ L +N L +P+
Sbjct: 304 ASSNEIRS-LCDLPPSLEEL---NVSNNKLI-ELPALPPR---LERLIASFNHLA-EVPE 354
Query: 562 SFGDLMSLKSLNLSNNNLSGSIPVSLEKLSY----------------LKDLNLSFNKLEG 605
+LK L++ N L P E + LK L++ N L
Sbjct: 355 LPQ---NLKQLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR- 409
Query: 606 EIPK 609
E P
Sbjct: 410 EFPD 413
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 4e-33
Identities = 72/405 (17%), Positives = 131/405 (32%), Gaps = 85/405 (20%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
L +S+ L +P L N S L+ + + +N +P + L+ ++ G+NQL
Sbjct: 134 EYLGVSNNQLE-KLPE-LQNSSFLKIIDVDNNSLK-KLPDLPPS---LEFIAAGNNQLE- 186
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
E+P NLPF ++ N +P + L + N E+ NL
Sbjct: 187 ELPE--LQNLPFLTAIYADNNSLKK-LPDLPLS---LESIVAGNNILE--ELPELQNLPF 238
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
L +Y N L+ +P+ +L L V L L
Sbjct: 239 LTTIYADNNLLK--------------------------TLPDLPPSLEALNVRDNYLTDL 272
Query: 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295
P +++ + + LS PNL L N S+ +
Sbjct: 273 ----PELPQSLTFLDVSENIFSGLSELP--------PNLYYLNASSNEIR-SLCDLP--- 316
Query: 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFID 355
L L + N +P+ L +RL + NHL + L L
Sbjct: 317 PSLEELNVSNNKLI-ELPALPPRL---ERLIASFNHLAEVPELPQNLKQL---------H 363
Query: 356 LSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI 415
+ N + + ++ S++ M+ + +PE NL L ++ N L
Sbjct: 364 VEYNPL------REFPDIPESVEDLRMN--SHLAEVPELPQNLKQL---HVETNPLR-EF 411
Query: 416 PITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460
P ++ L++ ++ K+ ++
Sbjct: 412 PDIPESVEDLRMN---SERVVDPYEFAHETTDKLEDDVFEHHHHH 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-32
Identities = 59/319 (18%), Positives = 121/319 (37%), Gaps = 42/319 (13%)
Query: 311 FIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL-----SNCKYLEFIDLSSNSIDGIL 365
FI + L+ ++++LT + +E + S + ++ + +
Sbjct: 2 FINPRNVSNTFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 366 SRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKL 425
+ L ++++ +S S+PE +L +L N+L +P L+ L
Sbjct: 62 VSRLRDCLDRQAHELELNNLGLS-SLPELPPHLESL---VASCNSLT-ELPELPQSLKSL 116
Query: 426 QVLYFPDNKLEGSIP---------------DEVCRLAKVYQLDLSNNKLSGSIPACFGDL 470
V L P E+ + + +D+ NN L +P
Sbjct: 117 LVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLP---DLP 172
Query: 471 ASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNN 530
SL ++ +N+L +P NL + + +NSL LP +L+ + N
Sbjct: 173 PSLEFIAAGNNQL-EELPE-LQNLPFLTAIYADNNSLKK-LPDLPLSLESI---VAGNNI 226
Query: 531 FSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590
+ + L ++ + N+L+ ++PD SL++LN+ +N L+ +P + L
Sbjct: 227 LE--ELPELQNLPFLTTIYADNNLLK-TLPDLPP---SLEALNVRDNYLT-DLPELPQSL 279
Query: 591 SYLKDLNLSFNKLEGEIPK 609
++L F+ L P
Sbjct: 280 TFLDVSENIFSGLSELPPN 298
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 2e-52
Identities = 73/360 (20%), Positives = 145/360 (40%), Gaps = 33/360 (9%)
Query: 245 NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQ 304
+++ LQ S++ + L ++ +L + G + SI I + L L L
Sbjct: 20 DLAEGIRAVLQKASVTDV---VTQEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLN 74
Query: 305 KNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGI 364
N + P NL L L + N +T + S+L N L + L+ ++I I
Sbjct: 75 GNQITDISP--LSNLVKLTNLYIGTNKITDI-------SALQNLTNLRELYLNEDNISDI 125
Query: 365 LSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQK 424
+ NL+ + ++ + S + N+T L + + + PI L
Sbjct: 126 ---SPLANLT-KMYSLNLGANHNL-SDLSPLSNMTGLNYLTVTESKVKDVTPI--ANLTD 178
Query: 425 LQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELI 484
L L N++E P + L ++ N+++ P ++ L +L + +N++
Sbjct: 179 LYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT 234
Query: 485 SVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKD 544
+ P NL + +L + +N ++ + +L L ++ N S + + +
Sbjct: 235 DLSP--LANLSQLTWLEIGTNQISDINAV--KDLTKLKMLNVGSNQISDISV--LNNLSQ 288
Query: 545 LQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
L LFL N L + G L +L +L LS N+++ P L LS + + + ++
Sbjct: 289 LNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 2e-48
Identities = 81/405 (20%), Positives = 143/405 (35%), Gaps = 61/405 (15%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
L ++ P +L+ L + + + ++ L +++
Sbjct: 3 ATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVTQE--ELESITKLVVAGEKVAS 58
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
+NL E LNL+ N S LSN L L + N + NLT
Sbjct: 59 IQGIEYLTNL---EYLNLNGNQITD--ISPLSNLVKLTNLYIGTNKIT--DISALQNLTN 111
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
L ELYL+ + + I + NL + L LG N
Sbjct: 112 LRELYLNEDNISD--------------------------ISP-LANLTKMYSLNLGANHN 144
Query: 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295
+ + + NM+ + + + + + P L +L L L N P + +
Sbjct: 145 LSDLS-PLSNMTGLNYLTVTESKVKDV---TPIANLTDLYSLSLNYNQIEDISP--LASL 198
Query: 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFID 355
+ L N + P N+ L L + NN +T L S L+N L +++
Sbjct: 199 TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-------SPLANLSQLTWLE 249
Query: 356 LSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI 415
+ +N I I +V +L+ LK+ ++ +S + NL+ L +L N L
Sbjct: 250 IGTNQISDI---NAVKDLT-KLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNED 303
Query: 416 PITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460
+G L L L+ N + P + L+K+ D +N +
Sbjct: 304 MEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 3e-47
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 30/338 (8%)
Query: 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNN 330
L L + + +++L + + L NL+ L LN N
Sbjct: 21 LAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVASIQG--IEYLTNLEYLNLNGN 76
Query: 331 HLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGS 390
+T + S LSN L + + +N I I ++ NL+ +L+ +++ N+S
Sbjct: 77 QITDI-------SPLSNLVKLTNLYIGTNKITDI---SALQNLT-NLRELYLNEDNISDI 125
Query: 391 IPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVY 450
P + NLT + LG N+ S L + L L ++K++ P + L +Y
Sbjct: 126 SP--LANLTKMYSLNLGANHN-LSDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLY 180
Query: 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510
L L+ N++ P L SL + N++ + P N+ + L + +N +T
Sbjct: 181 SLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL 236
Query: 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLK 570
PL NL L ++ N S + NA+ + L+ L + N + S +L L
Sbjct: 237 SPL--ANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQI--SDISVLNNLSQLN 290
Query: 571 SLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608
SL L+NN L + L+ L L LS N + P
Sbjct: 291 SLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 1e-45
Identities = 75/336 (22%), Positives = 133/336 (39%), Gaps = 32/336 (9%)
Query: 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
L + P + ++ R LQK S + T L ++ +L + +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKVA 57
Query: 334 SLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE 393
S+ + LE+++L+ N I I + NL L + ++
Sbjct: 58 SI-------QGIEYLTNLEYLNLNGNQITDI---SPLSNLV-KLTNLYIGTNKIT--DIS 104
Query: 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453
+ NLTNL YL +N++ P L L K+ L N S + + + L
Sbjct: 105 ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNL-SDLSPLSNMTGLNYLT 161
Query: 454 LSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL 513
++ +K+ P +L L +LSL N++ + P +L + Y N +T P+
Sbjct: 162 VTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPV 217
Query: 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLN 573
N+ L + N + + P + + L +L + N + ++ DL LK LN
Sbjct: 218 --ANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKMLN 271
Query: 574 LSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609
+ +N +S I L LS L L L+ N+L E +
Sbjct: 272 VGSNQIS-DIS-VLNNLSQLNSLFLNNNQLGNEDME 305
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 1e-50
Identities = 53/335 (15%), Positives = 110/335 (32%), Gaps = 32/335 (9%)
Query: 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNN 330
E LY G+ + + + + + N N +
Sbjct: 11 SSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQIETRTGR 66
Query: 331 HLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGS 390
L + L + ++L S + LSH L+ + +
Sbjct: 67 ALKATADLLEDATQPG----RVALELRSVPLPQFP--DQAFRLSH-LQHMTIDAAGLM-E 118
Query: 391 IPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVY 450
+P+ + L L N L ++P ++ L +L+ L +P+ +
Sbjct: 119 LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST---- 173
Query: 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510
L +L++L L + S +P++ NL+++ L + ++ L+
Sbjct: 174 -----------DASGEHQGLVNLQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLSA- 220
Query: 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFL-EYNILQGSIPDSFGDLMSL 569
L I +L L ++D P GG L+ L L + + L ++P L L
Sbjct: 221 LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLDIHRLTQL 279
Query: 570 KSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
+ L+L +P + +L + + +
Sbjct: 280 EKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 2e-46
Identities = 56/333 (16%), Positives = 99/333 (29%), Gaps = 49/333 (14%)
Query: 214 EIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPN 273
+ + + N + Q +L + + P
Sbjct: 27 PYHDVLSQWQRHYNADRNRWHSAWRQA----NSNNPQIETRTGRALKATADLLEDATQPG 82
Query: 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
L L P+ F S L + + +P T L+ L L N L
Sbjct: 83 RVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLARNPLR 140
Query: 334 SLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE 393
+L S+ +L+ L+ + C +PE
Sbjct: 141 ALP-------------------------------ASIASLN-RLRELSIRACPELTELPE 168
Query: 394 EIGN---------LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVC 444
+ + L NL L + S+P ++ LQ L+ L ++ L ++ +
Sbjct: 169 PLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIH 226
Query: 445 RLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSS 504
L K+ +LDL + P FG A L+ L L + +P L + L+L
Sbjct: 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRG 286
Query: 505 NSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPN 537
LP I L I + + + +
Sbjct: 287 CVNLSRLPSLIAQLPANCIILVPPHLQAQLDQH 319
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 6e-45
Identities = 56/390 (14%), Positives = 113/390 (28%), Gaps = 85/390 (21%)
Query: 73 LGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132
+ S ++L+ + + + D SN P E+
Sbjct: 8 HHHSSGRENLYFQGSTALRPYHDVLSQ---WQRHYNADRNRWHSAWRQANSNNPQIETRT 64
Query: 133 LSKNMFHGGIPSALSNCTY--LRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAY 190
L + T L L P + L+ L+ + + GL
Sbjct: 65 GRALK---ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM--- 117
Query: 191 DHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQ 250
E+P+ + LE L L N L +PA I +
Sbjct: 118 -----------------------ELPDTMQQFAGLETLTLARNPLR-ALPASIAS----- 148
Query: 251 GVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSG 310
L L EL + +P + +
Sbjct: 149 --------------------LNRLRELSIRACPELTELPEPLASTD-------------- 174
Query: 311 FIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSV 370
L NL+ L L + SL +S++N + L+ + + ++ + + ++
Sbjct: 175 -ASGEHQGLVNLQSLRLEWTGIRSLP------ASIANLQNLKSLKIRNSPLSALGP--AI 225
Query: 371 GNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430
+L L+ D+ C + P G L L + ++P+ + +L +L+ L
Sbjct: 226 HHL-PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284
Query: 431 PDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460
+P + +L + + + +
Sbjct: 285 RGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 4e-36
Identities = 49/262 (18%), Positives = 90/262 (34%), Gaps = 26/262 (9%)
Query: 366 SRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKL 425
S + S + + + +
Sbjct: 4 SHHHHHHSS-GRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNP 58
Query: 426 QVLYFPDNKLEGSIPD--EVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNEL 483
Q+ L+ + D E L+L + L P L+ L+++++ + L
Sbjct: 59 QIETRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGL 116
Query: 484 ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIK 543
+ +P T + L L+ N L LP I +L L ++ +P +
Sbjct: 117 ME-LPDTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTD 174
Query: 544 D---------LQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLK 594
LQ L LE+ ++ S+P S +L +LKSL + N+ LS ++ ++ L L+
Sbjct: 175 ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLE 232
Query: 595 DLNLS-FNKLEGEIPKGGSFGN 615
+L+L L P FG
Sbjct: 233 ELDLRGCTALR-NYPP--IFGG 251
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-32
Identities = 49/286 (17%), Positives = 101/286 (35%), Gaps = 51/286 (17%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
AL + + L P + LS LQ + + + +P ++ L+ L+ N L
Sbjct: 84 VALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR- 140
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
+P +I +L L++ +P L++ E L
Sbjct: 141 ALPASIA-SLNRLRELSIRACPELTELPEPLASTD---------------ASGEHQGLVN 184
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
L+ L L + G++ +P I NL+NL+ L + + L
Sbjct: 185 LQSLRLEWTGIR--------------------------SLPASIANLQNLKSLKIRNSPL 218
Query: 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYV--RLPNLEELYLWGNHFSGSIPNFIF 293
+ I ++ ++ + L+ + +L++ P + L+ L L ++P I
Sbjct: 219 SA-LGPAIHHLPKLEELDLRGCT---ALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIH 274
Query: 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLEL 339
++L +L+L+ +PS L + + + L
Sbjct: 275 RLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHR 320
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 3e-22
Identities = 36/221 (16%), Positives = 71/221 (32%), Gaps = 40/221 (18%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHT---------LKLLSF 108
L ++ L +P+ + +L+ L+ L + + +P + + L+ L
Sbjct: 132 LTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRL 190
Query: 109 GDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPK 168
+ +P +I NL +SL + + + A+ + L L L P
Sbjct: 191 EWTGIR-SLPASIA-NLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPP 247
Query: 169 EIGNLTKLEELYLS-FNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEV 227
G L+ L L + L +P +I L LE
Sbjct: 248 IFGGRAPLKRLILKDCSNLL--------------------------TLPLDIHRLTQLEK 281
Query: 228 LALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPY 268
L L + +P+ I + + + + + Q P
Sbjct: 282 LDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPV 322
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 4e-04
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
L + S T+P + L+ L+ L L +P I + ++ + + ++
Sbjct: 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA-QL 316
Query: 118 PTNICSNLP 126
+ P
Sbjct: 317 DQHRPVARP 325
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 4e-50
Identities = 75/322 (23%), Positives = 119/322 (36%), Gaps = 37/322 (11%)
Query: 696 FSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEV 755
+ E D LIGRG +G+VYK + D VAVKVF+ ++F E +
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNI 58
Query: 756 MK--SIRHRNIIKIISCCSIGDFKALFK-ALALEYMPHGSLEKYLYSSNYILDIFQRLNI 812
+ + H NI + I + L +EY P+GSL KYL S + D +
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRL 116
Query: 813 MIDVASALEYL------YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866
V L YL Y + H DL NVL+ ++ +SDFG++ LT
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 867 VTQTQTPA------TIGYMALEY-------GSEGRVSTNGDVYNFGVMLMETFTGKKPTN 913
+ A TI YMA E D+Y G++ E F T+
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRC--TD 234
Query: 914 EIFNEGMT-----LKHWVNDWLLISIMKIVDGSLLSREDI--QFVAKEQCMSFVFNMAME 966
E + + V + M+++ R + + + +
Sbjct: 235 LFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIED 294
Query: 967 CTVESPEKRINAKEIVTRLLKI 988
C + E R+ A+ R+ ++
Sbjct: 295 CWDQDAEARLTAQXAEERMAEL 316
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 5e-50
Identities = 100/567 (17%), Positives = 193/567 (34%), Gaps = 86/567 (15%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
+ S + +IPS L ++++SL L N+ + + L++L ++++ I
Sbjct: 10 CDGRSRSFT-SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-TI 65
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKL 176
+ +L E L+LS N S + L+ L L N + G+ NLT L
Sbjct: 66 EGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNL 125
Query: 177 EELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLV 236
+ L + F + + L +L L + L
Sbjct: 126 QTLRIGNV----------------ETFSEIR--------RIDFAGLTSLNELEIKALSLR 161
Query: 237 GVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNAS 296
+ ++ I + L + + L I L ++ L L + + + +
Sbjct: 162 NYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDE 220
Query: 297 KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDL 356
S ++ S +F L L R L + + L+ L + + +L
Sbjct: 221 VSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSEL 280
Query: 357 SSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP 416
+ ++ L +
Sbjct: 281 GKV-------------------------------------ETVTIRRLHIPQFYLFYDLS 303
Query: 417 ITLGKLQKLQVLYFPDNKLEGSIPDEVCR-LAKVYQLDLSNNKLSGSI---PACFGDLAS 472
L+K++ + ++K+ +P + L + LDLS N + AC G S
Sbjct: 304 TVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPS 362
Query: 473 LRNLSLASNEL--ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNN 530
L+ L L+ N L + LK++ L++S N+ P+P + + ++ S
Sbjct: 363 LQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTG 421
Query: 531 FSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590
V+ I + L+ L + N L S L L+ L +S N L ++P +
Sbjct: 422 IR-VVKTCI--PQTLEVLDVSNNNLD-SFSL---FLPRLQELYISRNKLK-TLPDAS-LF 472
Query: 591 SYLKDLNLSFNKLEGEIPKGGSFGNFS 617
L + +S N+L+ +P G F +
Sbjct: 473 PVLLVMKISRNQLK-SVPD-GIFDRLT 497
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 3e-46
Identities = 87/451 (19%), Positives = 165/451 (36%), Gaps = 21/451 (4%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQLSGE 116
L++S LS S G LSSL+ L L N + S+F N+ L+ L G+ + E
Sbjct: 79 LDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSE 138
Query: 117 IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKL 176
I + L L + +L + + L L ++ A + L+ +
Sbjct: 139 IRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSV 198
Query: 177 EELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLV 236
L L L + L + + ++ L L L L+++
Sbjct: 199 RYLELRDTNLAR-FQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVE 257
Query: 237 GVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNAS 296
F+ T+ G+G N S S + + V + L++ + +
Sbjct: 258 -------FDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLE 310
Query: 297 KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDL 356
K+ R+ ++ + S +L++L+ L L+ N + L+ S + L+ + L
Sbjct: 311 KVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNS--ACKGAWPSLQTLVL 368
Query: 357 SSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP 416
S N + + + +L D+S +P+ + L +
Sbjct: 369 SQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV--- 424
Query: 417 ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNL 476
+ Q L+VL +N L+ S L ++ +L +S NKL ++P L +
Sbjct: 425 VKTCIPQTLEVLDVSNNNLD-SFSL---FLPRLQELYISRNKLK-TLPDASL-FPVLLVM 478
Query: 477 SLASNELISVIPSTFWNLKDILYLNLSSNSL 507
++ N+L SV F L + + L +N
Sbjct: 479 KISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 8e-45
Identities = 99/542 (18%), Positives = 183/542 (33%), Gaps = 95/542 (17%)
Query: 110 DNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKE 169
+ IP+ + + + +SL+LS N L C L++L L + I +
Sbjct: 14 SRSFT-SIPSGLTAAM---KSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT-IEGD 68
Query: 170 I-GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE-IGNLRNLEV 227
+L LE L LS N L + + G L +L+
Sbjct: 69 AFYSLGSLEHLDLSDNHLS--------------------------SLSSSWFGPLSSLKY 102
Query: 228 LALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGS 287
L L N + +F L NL+ L +
Sbjct: 103 LNLMGNPYQTLGVTSLFP------------------------NLTNLQTLRIGNVETFSE 138
Query: 288 IPNFIF-NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
I F + L+ LE++ S + + ++R++ L L+ + L F LS
Sbjct: 139 IRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFL--LEIFADILS 196
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYL 406
+ +YLE D + S V +S +K ++ E L L+ + L
Sbjct: 197 SVRYLELRDTNLARFQ--FSPLPVDEVSSPMKKLAFRGSVLT---DESFNELLKLLRYIL 251
Query: 407 GGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPAC 466
+ + + F ++ + + +L + L +
Sbjct: 252 ELSEV------EFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV 305
Query: 467 FGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT---GPLPLEIGNLKVLVK 523
+ L ++ +++ ++++ V S +LK + +L+LS N + G L
Sbjct: 306 YSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQT 365
Query: 524 IDFSMNNFS--GVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLS- 580
+ S N+ + +K+L L + N +PDS ++ LNLS+ +
Sbjct: 366 LVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV 424
Query: 581 --GSIPVSLEKL--------------SYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGN 624
IP +LE L L++L +S NKL+ +P F N
Sbjct: 425 VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRN 483
Query: 625 KL 626
+L
Sbjct: 484 QL 485
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 8e-28
Identities = 58/391 (14%), Positives = 134/391 (34%), Gaps = 44/391 (11%)
Query: 58 LNISHLSLSGTIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGE 116
L I ++ I L+SL L + + S+ +I + L+ ++ +
Sbjct: 128 LRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-F 186
Query: 117 IPTNICSNLPFFESLNLSKN---MFHGGIPSALSNCTYLRILRLSYNDFAGG-------I 166
+ L L L F + ++ L + +
Sbjct: 187 LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKL 246
Query: 167 PKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQ--------FSHNFSKCEIPNE 218
+ I L+++E + NGL G ++ + + V+ + ++
Sbjct: 247 LRYILELSEVEFDDCTLNGL-GDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV 305
Query: 219 IGNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLS--GSLQSIPYVRLPNLE 275
L ++ + + +K+ ++P ++ +++ + L N + S P+L+
Sbjct: 306 YSLLEKVKRITVENSKV-FLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQ 364
Query: 276 ELYLWGNHFS--GSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
L L NH + L+ L++ +N+F +P + ++ L L++ +
Sbjct: 365 TLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR 423
Query: 334 SL---------TLELSF--LSSLS-NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFD 381
+ L++S L S S L+ + +S N + + +L L +
Sbjct: 424 VVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTL----PDASLFPVLLVMK 479
Query: 382 MSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN 412
+S + LT+L +L N +
Sbjct: 480 ISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-26
Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 9/279 (3%)
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYL 406
+C D S S I S L+ ++K D+S ++ ++ NL L
Sbjct: 3 SCDASGVCDGRSRSFTSIPS-----GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLIL 57
Query: 407 GGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCR-LAKVYQLDLSNNKLSG-SIP 464
+ +N L L+ L DN L S+ L+ + L+L N +
Sbjct: 58 KSSRINTIEGDAFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVT 116
Query: 465 ACFGDLASLRNLSLASNELISVIP-STFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523
+ F +L +L+ L + + E S I F L + L + + SL + +++ +
Sbjct: 117 SLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176
Query: 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583
+ ++ + ++ + +++L L L + S
Sbjct: 177 LTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236
Query: 584 PVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFE 622
S +L L L +++E + G+F+ +
Sbjct: 237 DESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESD 275
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 9e-14
Identities = 46/234 (19%), Positives = 85/234 (36%), Gaps = 25/234 (10%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQLSGE 116
L+I L + + L ++ + + +++ +P S ++ +L+ L +N + E
Sbjct: 291 LHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEE 349
Query: 117 IPTN--ICSNLPFFESLNLSKNMFH--GGIPSALSNCTYLRILRLSYNDFAGGIPKEIGN 172
N P ++L LS+N L L L +S N F +P
Sbjct: 350 YLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF-HPMPDSCQW 408
Query: 173 LTKLEELYLSFNGLQGAYDHGFLQIFV----KNIFVQFSHNFSK-----------CEIPN 217
K+ L LS G++ + V N FS + +P
Sbjct: 409 PEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLP- 467
Query: 218 EIGNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYVR 270
+ L V+ + N+L +P IF ++++Q + L N S I Y+
Sbjct: 468 DASLFPVLLVMKISRNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 520
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 9e-48
Identities = 63/283 (22%), Positives = 113/283 (39%), Gaps = 36/283 (12%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+ G ++K R Q G ++ VKV + R + F+ EC ++ H N++ ++ C
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYS-SNYILDIFQRLNIMIDVASALEYLYFGYSTP 830
L +MP+GSL L+ +N+++D Q + +D+A + +L+
Sbjct: 77 QSPPAPHP--TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TLEPL 133
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA---LEYGSEG 887
+ L +V++ ++M A +S + Q + PA ++A L+ E
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMAD----VKFSFQSPGRMYAPA---WVAPEALQKKPED 186
Query: 888 RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947
+ D+++F V+L E T + P F ++ MK+ L R
Sbjct: 187 TNRRSADMWSFAVLLWELVTREVP----F-ADLSNMEI--------GMKVALEGL--RPT 231
Query: 948 IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990
I V + C E P KR IV L K+ D
Sbjct: 232 IP----PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 2e-47
Identities = 69/290 (23%), Positives = 120/290 (41%), Gaps = 44/290 (15%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRA-------FKSFDVECEVMKSIRHRNII 765
IG+GGFG V+K R ++D VA+K F+ F E +M ++ H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
K+ + +E++P G L L + + +L +M+D+A +EY+
Sbjct: 87 KLYGLMH----NPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ- 139
Query: 826 GYSTPVIHCDLKPSNVLL-----GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA 880
+ P++H DL+ N+ L + A ++DFG+++ + + +MA
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH-----SVSGLLGNFQWMA 194
Query: 881 LE--YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938
E E + D Y+F ++L TG+ P +E + I I
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-----------INMIR 243
Query: 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ L R I E C + N+ C P+KR + IV L ++
Sbjct: 244 EEGL--RPTIP----EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 2e-47
Identities = 66/277 (23%), Positives = 120/277 (43%), Gaps = 30/277 (10%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCC 771
IG G FG+VYK + +VAVK+ N + ++F E V++ RH NI+ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ A+ ++ SL +L++S ++ + ++I A ++YL+ + +
Sbjct: 90 TAPQL-----AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA---LEYGSEGR 888
IH DLK +N+ L ++ + DFG+ +R Q +I +MA +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 889 VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDI 948
S DVY FG++L E TG+ P + + + I + GSL D+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQI-------IEMVGRGSL--SPDL 247
Query: 949 QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
V C + + EC + ++R + I+ +
Sbjct: 248 SKVRSN-CPKRMKRLMAECLKKKRDERPSFPRILAEI 283
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 5e-47
Identities = 69/294 (23%), Positives = 115/294 (39%), Gaps = 22/294 (7%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEV--MKSIRHRNIIKIIS 769
+G+G +G V++ Q G VAVK+F+ + KS+ E E+ +RH NI+ I+
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIA 69
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL-----Y 824
+ L Y GSL YL LD L I++ +AS L +L
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA--TIGYMALE 882
+ H DLK N+L+ N ++D G+ + ++ + P T YMA E
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 883 ------YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
D++ FG++L E + + V + M+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 247
Query: 937 IVDGSLLSREDI-QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989
V R +I + ++ + + EC ++P R+ A I L KI+
Sbjct: 248 KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 1e-46
Identities = 65/295 (22%), Positives = 109/295 (36%), Gaps = 22/295 (7%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEV--MKSIRHRNIIKIIS 769
IG+G +G V+ + + G +VAVKVF S+ E E+ +RH NI+ I+
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIA 98
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL-----Y 824
G L +Y +GSL YL + LD L + S L +L
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA--TIGYMA-- 880
+ H DLK N+L+ N ++D G+ + V T YM
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 881 -LEYGSEGR---VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
L+ D+Y+FG++L E + + V M+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMR 276
Query: 937 IVDGSLLSREDI-QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990
+ R + ++C+ + + EC +P R+ A + L K+++
Sbjct: 277 EIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 5e-46
Identities = 67/278 (24%), Positives = 110/278 (39%), Gaps = 35/278 (12%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+GRG FG V KA +VA+K + K+F VE + + H NI+K+ C
Sbjct: 16 VGRGAFGVVCKA-KWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGAC-- 70
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSN--YILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ L +EY GSL L+ + ++ + + + YL+ +
Sbjct: 71 --LNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 832 IHCDLKPSNVLLGDNM-VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVS 890
IH DLKP N+LL V + DFG + + A +MA E S
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAA---WMAPEVFEGSNYS 181
Query: 891 TNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQF 950
DV+++G++L E T +KP +EI IM V R +
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFDEI------------GGPAFRIMWAVHNGT--RPPLI- 226
Query: 951 VAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ + ++ C + P +R + +EIV + +
Sbjct: 227 ---KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 7e-46
Identities = 69/491 (14%), Positives = 149/491 (30%), Gaps = 57/491 (11%)
Query: 121 ICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELY 180
I N ++ ++ + + S + ++ L LS N + ++ TKLE L
Sbjct: 5 IKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLN 64
Query: 181 LSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIP 240
LS N L E ++ +L L L L N +
Sbjct: 65 LSSNVLY--------------------------ETL-DLESLSTLRTLDLNNNYV----- 92
Query: 241 AEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSR 300
E+ +I+ + NN++S + R + +YL N + S++
Sbjct: 93 QELLVGPSIETLHAANNNIS----RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQY 148
Query: 301 LELQKNSFSGF-IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359
L+L+ N + L+ L L N + + L+ +DLSSN
Sbjct: 149 LDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-------VKGQVVFAKLKTLDLSSN 201
Query: 360 SIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN-GSIPIT 418
+ + + + + + + + I + + NL F L GN + G++
Sbjct: 202 KLAFM--GPEFQSAA-GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDF 257
Query: 419 LGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSL 478
K Q++Q + K +E C + L +L+
Sbjct: 258 FSKNQRVQTVAKQTVKKLTGQNEEECTVP--TLGHYGAYCCEDLPAPFADRLIALKRKEH 315
Query: 479 ASNEL----ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGV 534
A + N ++ + + + ++
Sbjct: 316 ALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQ 375
Query: 535 IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLN-LSNNNLSGSIPVSLEKLSYL 593
+ N +L + + + + L+ L + + + + +
Sbjct: 376 VSNGRRAHAELDGTLQQAVGQI-ELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAI 434
Query: 594 KDLNLSFNKLE 604
+D ++ +K
Sbjct: 435 RDWDMYQHKET 445
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 164 bits (416), Expect = 2e-43
Identities = 84/562 (14%), Positives = 157/562 (27%), Gaps = 79/562 (14%)
Query: 69 IPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFF 128
I N + + + + ++ + +K L N LS +I +
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLS-QISAADLAPFTKL 60
Query: 129 ESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQG 188
E LNLS N+ + L + + LR L L+ N +E+ +E L+ + N +
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS- 112
Query: 189 AYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMST 248
+ + + + L NK+ + + S
Sbjct: 113 -------------------------RVS--CSRGQGKKNIYLANNKITMLRDLDEGCRSR 145
Query: 249 IQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSF 308
+Q + L+ N + + LE L L N + + +KL L+L N
Sbjct: 146 VQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVVF-AKLKTLDLSSNKL 203
Query: 309 SGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRK 368
+ F+ F + + + L NN L + L F +L + DL N R
Sbjct: 204 A-FMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEH------FDLRGNGFHCGTLRD 256
Query: 369 SVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVL 428
+ + + + G +P +L L
Sbjct: 257 FFSKNQRVQTV----AKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPF--ADRLIAL 310
Query: 429 YFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP 488
++ L L ++ + + A R + + +VI
Sbjct: 311 KRKEHAL----------------LSGQGSETE-RLECERENQARQREIDALKEQYRTVID 353
Query: 489 STFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFL 548
+ + L +L + L G +LQ
Sbjct: 354 QVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAV-----------GQIELQHA 402
Query: 549 FLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608
E + LQ NN + K + L + N KL GE
Sbjct: 403 TEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEAD 462
Query: 609 KGGSFGNFSAESFEGNKLLCGS 630
+ N + + + S
Sbjct: 463 LALASANATLQELVVREQNLAS 484
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 163 bits (413), Expect = 5e-43
Identities = 55/471 (11%), Positives = 126/471 (26%), Gaps = 83/471 (17%)
Query: 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVK 200
I N +I +++ + + + ++EL LS N L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQ------------ 48
Query: 201 NIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260
++ LE+L L N L + + ++ST++ + L NN +
Sbjct: 49 -------------ISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ 93
Query: 261 GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLR 320
+ P++E L+ N+ S + + L N + G
Sbjct: 94 ----ELL--VGPSIETLHAANNNIS-RVSCSRG--QGKKNIYLANNKITMLRDLDEGCRS 144
Query: 321 NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIF 380
++ L L N + ++ ++ LE ++L N I
Sbjct: 145 RVQYLDLKLNEIDTVNFAELA----ASSDTLEHLNLQYNFIY------------------ 182
Query: 381 DMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIP 440
+ ++ L L N L + + + +NKL I
Sbjct: 183 ---------DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIE 230
Query: 441 DEVCRLAKVYQLDLSNNKLS-GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILY 499
+ + DL N G++ F ++ ++ + + ++
Sbjct: 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE--ECTVPTL 288
Query: 500 LNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKD-------LQFLFLEY 552
+ + L L+ + + + ++ + +
Sbjct: 289 GHYGAYCCE---DLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALK 345
Query: 553 NILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603
+ I + +L L + + L
Sbjct: 346 EQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQ 396
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 9e-23
Identities = 29/178 (16%), Positives = 69/178 (38%), Gaps = 11/178 (6%)
Query: 438 SIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDI 497
+I + + ++++ L ++ + +++ L L+ N L + + +
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 498 LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG 557
LNLSSN L L + +L L +D + N + ++ L N +
Sbjct: 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS- 112
Query: 558 SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGN 615
+ S K++ L+NN ++ + S ++ L+L N+++ + +
Sbjct: 113 RVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAAS 167
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 99 bits (249), Expect = 4e-22
Identities = 41/377 (10%), Positives = 97/377 (25%), Gaps = 47/377 (12%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF--NIHTLKLLSFGDNQL 113
+ +++ ++ G S +Q L L N+ ++ F+ + TL+ L+ N +
Sbjct: 123 KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSDTLEHLNLQYNFI 181
Query: 114 SGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNL 173
++ + ++L+LS N + + + + L N I K +
Sbjct: 182 Y-DVKGQV--VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236
Query: 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233
LE L NG +N V +
Sbjct: 237 QNLEHFDLRGNGFHC--------------------------GTLRDFFSKNQRVQTVAKQ 270
Query: 234 KLVGVIPAEIFNMSTIQGVGLQNNSLS----GSLQSIPYVRLPNLEELYLWGNHFSGSIP 289
+ + + + ++ L G+ +
Sbjct: 271 TVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETE-RLE 329
Query: 290 NFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCK 349
N ++ ++ K + I + L L + + +
Sbjct: 330 CERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDE--QVSNGRRAHAELD 387
Query: 350 YLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGN 409
+ + +S L++ E+ N I +
Sbjct: 388 GTLQQAVGQIELQHATEEQS------PLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQ 441
Query: 410 NLNGSIPITLGKLQKLQ 426
+ + +L+KL
Sbjct: 442 HKETQLAEENARLKKLN 458
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 2e-45
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 31/279 (11%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCC 771
IG G FG+V++A G +VAVK+ +Q F E +MK +RH NI+ +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSN--YILDIFQRLNIMIDVASALEYLYFGYST 829
+ + ++ EY+ GSL + L+ S LD +RL++ DVA + YL+ +
Sbjct: 104 T----QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNP 158
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
P++H +LK N+L+ + DFG+++L + F++ T +MA E +
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 890 STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949
+ DVY+FGV+L E T ++P W ++ ++V + + +
Sbjct: 217 NEKSDVYSFGVILWELATLQQP-----------------WGNLNPAQVVAA--VGFKCKR 257
Query: 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
V + C P KR + I+ L +
Sbjct: 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 5e-45
Identities = 70/395 (17%), Positives = 133/395 (33%), Gaps = 31/395 (7%)
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASK 297
I + + V + + + L N + + + +P + + +
Sbjct: 13 IDSNLQYDCVFYDVHI-DMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQ 70
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357
+ L L F +++L + N + L + N L + L
Sbjct: 71 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHV-----FQNVPLLTVLVLE 125
Query: 358 SNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIP 416
N + L R N L MS+ N+ I ++ T+L L N L
Sbjct: 126 RNDLS-SLPRGIFHNTP-KLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTH--- 179
Query: 417 ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNL 476
+ L + L N L ++ V +LD S+N ++ + L L
Sbjct: 180 VDLSLIPSLFHANVSYNLLS-TLAI----PIAVEELDASHNSIN-VVRG--PVNVELTIL 231
Query: 477 SLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP 536
L N L + N ++ ++LS N L + ++ L ++ S N +
Sbjct: 232 KLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALN 288
Query: 537 NAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDL 596
I L+ L L +N L + + L++L L +N++ ++ +S LK+L
Sbjct: 289 LYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLST--HHTLKNL 344
Query: 597 NLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631
LS N + F N + + + C
Sbjct: 345 TLSHNDWD-CNSLRALFRNVARPAVDDADQHCKID 378
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 6e-38
Identities = 73/420 (17%), Positives = 145/420 (34%), Gaps = 84/420 (20%)
Query: 117 IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLTK 175
I +N+ + F +++ +I+ + +P + + +
Sbjct: 13 IDSNLQYDC-VFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQ 70
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNK 234
+E L L+ ++ EI ++ L +G N
Sbjct: 71 VELLNLNDLQIE--------------------------EIDTYAFAYAHTIQKLYMGFNA 104
Query: 235 LVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF- 293
+ +P +F +P L L L N S S+P IF
Sbjct: 105 IR-YLPPHVFQ------------------------NVPLLTVLVLERNDLS-SLPRGIFH 138
Query: 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353
N KL+ L + N+ TF +L+ L L++N LT + LS + + L
Sbjct: 139 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-----LSLIPS---LFH 190
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
++S N + + + +++ D S +++ + + L L NNL
Sbjct: 191 ANVSYNLLSTL-------AIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQHNNLT- 239
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEV-CRLAKVYQLDLSNNKLSGSIPACFGDLAS 472
L L + N+LE I ++ ++ +L +SNN+L ++ + +
Sbjct: 240 DTA-WLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPT 296
Query: 473 LRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFS 532
L+ L L+ N + + + L L NS+ L++ L + S N++
Sbjct: 297 LKVLDLSHNH-LLHVERNQPQFDRLENLYLDHNSIV---TLKLSTHHTLKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 3e-36
Identities = 74/430 (17%), Positives = 141/430 (32%), Gaps = 108/430 (25%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQLSGE 116
++I + L++ + + ++ +P ++ + ++LL+ D Q+ E
Sbjct: 26 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE-E 83
Query: 117 IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKL 176
I T + + L + N I L + F N+ L
Sbjct: 84 IDTYAFAYAHTIQKLYMGFN----------------AIRYLPPHVFQ--------NVPLL 119
Query: 177 EELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNKL 235
L L N L +P I N L L++ N L
Sbjct: 120 TVLVLERNDLS--------------------------SLPRGIFHNTPKLTTLSMSNNNL 153
Query: 236 VGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294
I + F +++Q + L +N L+ + +P+L + N S ++ I
Sbjct: 154 E-RIEDDTFQATTSLQNLQLSSNRLT----HVDLSLIPSLFHANVSYNLLS-TLAIPIA- 206
Query: 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFI 354
+ L+ NS + L LK L +N+LT + L N L +
Sbjct: 207 ---VEELDASHNSINVVRGPVNVELTILK---LQHNNLTD-------TAWLLNYPGLVEV 253
Query: 355 DLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNG 413
DLS N ++ I + L Y+ N L
Sbjct: 254 DLSYNELE---------------------------KIMYHPFVKMQRLERLYISNNRLV- 285
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
++ + + L+VL N L + + ++ L L +N + ++ +L
Sbjct: 286 ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTL 341
Query: 474 RNLSLASNEL 483
+NL+L+ N+
Sbjct: 342 KNLTLSHNDW 351
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 139 bits (351), Expect = 1e-35
Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 28/327 (8%)
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
I + + + + + + L N K + N+ + L L L
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAAL-----LD 66
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFY 405
+ + +E ++L+ I+ I + H+++ M + +P + N+ L
Sbjct: 67 SFRQVELLNLNDLQIEEI-DTYAFAYA-HTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLV 123
Query: 406 LGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPDEVCR-LAKVYQLDLSNNKLSGSI 463
L N+L+ S+P KL L +N LE I D+ + + L LS+N+L+ +
Sbjct: 124 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HV 180
Query: 464 PACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523
+ SL + +++ N L ST + L+ S NS+ + L
Sbjct: 181 D--LSLIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSINV---VRGPVNVELTI 230
Query: 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583
+ NN + + L + L YN L+ + F + L+ L +SNN L ++
Sbjct: 231 LKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-AL 287
Query: 584 PVSLEKLSYLKDLNLSFNKLEGEIPKG 610
+ + + LK L+LS N L + +
Sbjct: 288 NLYGQPIPTLKVLDLSHNHLL-HVERN 313
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 3e-33
Identities = 67/419 (15%), Positives = 133/419 (31%), Gaps = 82/419 (19%)
Query: 49 DVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLS 107
D+ + + + ++ + L + ++ L L+ Q I F HT++ L
Sbjct: 41 DITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLY 99
Query: 108 FGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIP 167
G N + +P ++ N+P L L +N N L L +S N+ I
Sbjct: 100 MGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIE 157
Query: 168 KEI-GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLE 226
+ T L+ L LS N L + + + +L
Sbjct: 158 DDTFQATTSLQNLQLSSNRLT--------------------------HVD--LSLIPSLF 189
Query: 227 VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG 286
+ N L + + ++ + +NS++ + L L L N+ +
Sbjct: 190 HANVSYNLL-----STLAIPIAVEELDASHNSIN----VVRGPVNVELTILKLQHNNLT- 239
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
+ N L ++L N + F ++ L+RL ++NN L +L L + +
Sbjct: 240 DTAWLL-NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPT-- 296
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYL 406
L+ +DLS N + + L YL
Sbjct: 297 ----LKVLDLSHNHLL---------------------------HVERNQPQFDRLENLYL 325
Query: 407 GGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA 465
N++ ++ + L+ L N + + V + + + I
Sbjct: 326 DHNSIV-TLKL--STHHTLKNLTLSHNDWDCN--SLRALFRNVARPAVDDADQHCKIDY 379
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 6e-18
Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 4/207 (1%)
Query: 430 FPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS 489
P I + Y + + L + + ++ ++ + + +
Sbjct: 4 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAA 63
Query: 490 TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLF 549
+ + + LNL+ + + K+ N + P+ + L L
Sbjct: 64 LLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123
Query: 550 LEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609
LE N L F + L +L++SNNNL + + + L++L LS N+L +
Sbjct: 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDL 182
Query: 610 GGSFGNFSAESFEGNKL--LCGSPNLH 634
+ + N L L +
Sbjct: 183 SL-IPSLFHANVSYNLLSTLAIPIAVE 208
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 7e-44
Identities = 75/359 (20%), Positives = 135/359 (37%), Gaps = 51/359 (14%)
Query: 250 QGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFS 309
++ + +Q + L + + + ++P+ + ++ L + N+ +
Sbjct: 18 AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLPA--HITTLVIPDNNLT 74
Query: 310 GFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKS 369
+P+ LR L+ ++ N LTSL L + + S
Sbjct: 75 -SLPALPPELRTLE---VSGNQLTSLP------VLPPGLLELSIFSNPLTHLPALPS--- 121
Query: 370 VGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLY 429
L + ++ S+P L L + N L S+P +L KL
Sbjct: 122 ------GLCKLWIFGNQLT-SLPVLPPGLQEL---SVSDNQLA-SLPALPSELCKLWAY- 169
Query: 430 FPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS 489
+N+L S+P L +L +S+N+L+ S+P + L L +N L S +P+
Sbjct: 170 --NNQLT-SLPMLPSGL---QELSVSDNQLA-SLPT---LPSELYKLWAYNNRLTS-LPA 218
Query: 490 TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLF 549
LK L +S N LT LP+ LK L S N + +P G L L
Sbjct: 219 LPSGLK---ELIVSGNRLTS-LPVLPSELKEL---MVSGNRLTS-LPMLPSG---LLSLS 267
Query: 550 LEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608
+ N L +P+S L S ++NL N LS +L +++ + + +
Sbjct: 268 VYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGA 325
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 151 bits (382), Expect = 3e-38
Identities = 85/419 (20%), Positives = 142/419 (33%), Gaps = 60/419 (14%)
Query: 222 LRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWG 281
VL +G + L +P + I + + +N+L+ S+P P L L + G
Sbjct: 39 NNGNAVLNVGESGL-TTLPDCLPA--HITTLVIPDNNLT----SLP-ALPPELRTLEVSG 90
Query: 282 NHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSF 341
N + S+P +LS L +L + N LTSL +
Sbjct: 91 NQLT-SLPVLPPGLLELSIFSNPLTHLPALPS-------GLCKLWIFGNQLTSLPVLPPG 142
Query: 342 LSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNL 401
L L +S N + S+ L L + ++ S+P L L
Sbjct: 143 LQEL---------SVSDNQLA------SLPALPSELCKLWAYNNQLT-SLPMLPSGLQEL 186
Query: 402 IGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSG 461
+ N L S+P +L KL +N+L S+P L + L +S N+L+
Sbjct: 187 ---SVSDNQLA-SLPTLPSELYKLWAY---NNRLT-SLPALPSGLKE---LIVSGNRLT- 234
Query: 462 SIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVL 521
S+P + L+ L ++ N L S +P L L++ N LT LP + +L
Sbjct: 235 SLPV---LPSELKELMVSGNRLTS-LPMLPSGLL---SLSVYRNQLTR-LPESLIHLSSE 286
Query: 522 VKIDFSMNNFSGVIPNAIGGIKDLQFL---FLEYNILQGSIPDSFGDLMSLKSLNLSNNN 578
++ N S A+ I + +++ S P L + L
Sbjct: 287 TTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAR 346
Query: 579 LSGSIPV----SLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNL 633
P + +L ++L E F A+ L L
Sbjct: 347 EGEPAPADRWHMFGQEDNADAFSLFLDRLS-ETENFIKDAGFKAQISSWLAQLAEDEAL 404
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 6e-36
Identities = 76/408 (18%), Positives = 130/408 (31%), Gaps = 85/408 (20%)
Query: 112 QLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIG 171
+ ++ + + LN+ ++ +P L + L + N+ +P
Sbjct: 29 AVVQKMRACLNNGN---AVLNVGESGLTT-LPDCLPAH--ITTLVIPDNNLTS-LPALPP 81
Query: 172 NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALG 231
L L +S N L +P L L + +
Sbjct: 82 ELR---TLEVSGNQLT--------------------------SLPVLPPGLLELSIFSNP 112
Query: 232 LNKLVGVIPAEIFNMSTIQGVGLQNNSLSG-SLQSIPYVRLPNLEELYLWGNHFSGSIPN 290
L L + GL + G L S+P V P L+EL + N + S+P
Sbjct: 113 LTHLPALPS------------GLCKLWIFGNQLTSLP-VLPPGLQELSVSDNQLA-SLPA 158
Query: 291 FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350
L +L N + +P L+ L +++N L SL S L L
Sbjct: 159 LPSE---LCKLWAYNNQLT-SLPMLPSGLQELS---VSDNQLASLPTLPSELYKL----- 206
Query: 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNN 410
+N + S+ L LK +S ++ S+P L L + GN
Sbjct: 207 ----WAYNNRL------TSLPALPSGLKELIVSGNRLT-SLPVLPSELKEL---MVSGNR 252
Query: 411 LNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDL 470
L S+P+ L L N+L +P+ + L+ ++L N LS ++
Sbjct: 253 LT-SLPMLPSGLLS---LSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307
Query: 471 ASLRNLS---LASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI 515
S S + + + P L L P P +
Sbjct: 308 TSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADR 355
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 125 bits (314), Expect = 1e-29
Identities = 69/377 (18%), Positives = 126/377 (33%), Gaps = 78/377 (20%)
Query: 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114
+T L I +L+ ++P+ L ++L + NQ + S+P + L + S L
Sbjct: 63 ITTLVIPDNNLT-SLPALPPEL---RTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLP 117
Query: 115 GEIPTNICS-------------NLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYND 161
+P+ +C P + L++S N +P+ S L L N
Sbjct: 118 -ALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQL-ASLPALPSE---LCKLWAYNNQ 172
Query: 162 FAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGN 221
+P L EL +S N L +P
Sbjct: 173 LT-SLPMLPSGLQ---ELSVSDNQLA--------------------------SLPTLPSE 202
Query: 222 LRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWG 281
L L L L PA + + + N L+ S+P V L+EL + G
Sbjct: 203 LYKLWAYNNRLTSL----PALPSGLKELI---VSGNRLT----SLP-VLPSELKELMVSG 250
Query: 282 NHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLE--- 338
N + S+P S L L + +N + +P + +L + + L N L+ TL+
Sbjct: 251 NRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305
Query: 339 -LSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGN 397
++ S + +S + + + + + + + G
Sbjct: 306 EITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPAD----RWHMFGQ 361
Query: 398 LTNLIGFYLGGNNLNGS 414
N F L + L+ +
Sbjct: 362 EDNADAFSLFLDRLSET 378
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 4e-43
Identities = 71/287 (24%), Positives = 109/287 (37%), Gaps = 42/287 (14%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG GGFG VY+A G EVAVK + ++ E ++ ++H NII +
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
C K L +E+ G L + L + +N + +A + YL+
Sbjct: 74 VCL----KEPNLCLVMEFARGGPLNRVLSGKR--IPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 830 PVIHCDLKPSNVLLG--------DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
P+IH DLK SN+L+ N + ++DFG L RE T+ +MA
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFG----LAREWHRTTKMSAAGAYAWMAP 183
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941
E S DV+++GV+L E TG+ P G+ +
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVP-----FRGIDGLAV--------AYGVAMNK 230
Query: 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
L I C + +C P R + I+ +L I
Sbjct: 231 L--ALPIP----STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 158 bits (400), Expect = 1e-42
Identities = 63/293 (21%), Positives = 110/293 (37%), Gaps = 22/293 (7%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEV--MKSIRHRNIIKIIS 769
IG+G FG V++ + + G EVAVK+F+ + +S+ E E+ +RH NI+ I+
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIA 103
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL-----Y 824
+ + L +Y HGSL YL + Y + + + + + AS L +L
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA--TIGYMALE 882
+ H DLK N+L+ N ++D G+ + T YMA E
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 883 ------YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
D+Y G++ E + + V + M+
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 281
Query: 937 IVDGSLLSREDI-QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
V R +I + + + + EC + R+ A I L ++
Sbjct: 282 KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 9e-42
Identities = 65/392 (16%), Positives = 128/392 (32%), Gaps = 53/392 (13%)
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASK 297
I + + V + + + L N + + + +P + + +
Sbjct: 19 IDSNLQYDCVFYDVHI-DMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQ 76
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357
+ L L F +++L + N + L + N L + L
Sbjct: 77 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHV-----FQNVPLLTVLVLE 131
Query: 358 SNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIP 416
N + S+P I N L + NNL
Sbjct: 132 RNDLS---------------------------SLPRGIFHNTPKLTTLSMSNNNLERIED 164
Query: 417 ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNL 476
T LQ L N+L + + + ++ ++S N LS ++ L
Sbjct: 165 DTFQATTSLQNLQLSSNRLT-HVDLSL--IPSLFHANVSYNLLST-----LAIPIAVEEL 216
Query: 477 SLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP 536
+ N + V L L L N+LT + N LV++D S N ++
Sbjct: 217 DASHNSINVVRGPVNVELT---ILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELEKIMY 271
Query: 537 NAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDL 596
+ ++ L+ L++ N L ++ + +LK L+LS+N+L + + + L++L
Sbjct: 272 HPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329
Query: 597 NLSFNKLEGEIPKGGSFGNFSAESFEGNKLLC 628
L N + + + + N C
Sbjct: 330 YLDHNSIV-TLK-LSTHHTLKNLTLSHNDWDC 359
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 1e-39
Identities = 73/441 (16%), Positives = 145/441 (32%), Gaps = 103/441 (23%)
Query: 142 IPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKN 201
I S L + + E L + + + ++
Sbjct: 19 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-------------- 64
Query: 202 IFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260
++P + + R +E+L L ++ I F
Sbjct: 65 ------------KLPAALLDSFRQVELLNLNDLQIE-EIDTYAFA--------------- 96
Query: 261 GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGNL 319
+++LY+ N +P +F N L+ L L++N S F N
Sbjct: 97 ---------YAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNT 146
Query: 320 RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKI 379
L L ++NN+L + + L+ + LSSN + +
Sbjct: 147 PKLTTLSMSNNNLERIEDDT-----FQATTSLQNLQLSSNRLTHV--------------- 186
Query: 380 FDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSI 439
++ + +L + N L+ TL ++ L N + +
Sbjct: 187 --------------DLSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VV 226
Query: 440 PDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILY 499
V ++ L L +N L+ + L + L+ NEL ++ F ++ +
Sbjct: 227 RGPVNV--ELTILKLQHNNLT-DTAW-LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLER 282
Query: 500 LNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSI 559
L +S+N L L L + L +D S N+ + L+ L+L++N + ++
Sbjct: 283 LYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TL 339
Query: 560 PDSFGDLMSLKSLNLSNNNLS 580
+LK+L LS+N+
Sbjct: 340 K--LSTHHTLKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 3e-36
Identities = 79/436 (18%), Positives = 150/436 (34%), Gaps = 91/436 (20%)
Query: 109 GDNQLSGEIPTN-----ICSNLPFF-ESLNLSKNMFHGGIPSALSNCTY--LRILRLSYN 160
G Q P I SNL + ++ +M + + T +I+ +
Sbjct: 2 GGQQRYNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNS 61
Query: 161 DFAGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI 219
+P + + ++E L L+ ++ EI
Sbjct: 62 TMR-KLPAALLDSFRQVELLNLNDLQIE--------------------------EIDTYA 94
Query: 220 -GNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELY 278
++ L +G N + +P +F +P L L
Sbjct: 95 FAYAHTIQKLYMGFNAIR-YLPPHVFQ------------------------NVPLLTVLV 129
Query: 279 LWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTL 337
L N S S+P IF N KL+ L + N+ TF +L+ L L++N LT +
Sbjct: 130 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD- 187
Query: 338 ELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGN 397
LS + + L ++S N + + + +++ D S +++ + +
Sbjct: 188 ----LSLIPS---LFHANVSYNLLSTL-------AIPIAVEELDASHNSIN-VVRGPV-- 230
Query: 398 LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCR-LAKVYQLDLSN 456
L L NNL L L + N+LE I + ++ +L +SN
Sbjct: 231 NVELTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISN 287
Query: 457 NKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG 516
N+L ++ + +L+ L L+ N + + + L L NS+ L++
Sbjct: 288 NRLV-ALNLYGQPIPTLKVLDLSHNH-LLHVERNQPQFDRLENLYLDHNSIV---TLKLS 342
Query: 517 NLKVLVKIDFSMNNFS 532
L + S N++
Sbjct: 343 THHTLKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 3e-35
Identities = 86/574 (14%), Positives = 176/574 (30%), Gaps = 130/574 (22%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQLSGE 116
++I + L++ + + ++ +P ++ + ++LL+ D Q+ E
Sbjct: 32 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE-E 89
Query: 117 IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLTK 175
I T + + L + N P N L +L L ND + +P+ I N K
Sbjct: 90 IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPK 148
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNK 234
L L +S N L+ I ++ +L+ L L N+
Sbjct: 149 LTTLSMSNNNLE--------------------------RIEDDTFQATTSLQNLQLSSNR 182
Query: 235 LVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294
L + +P+L + N S ++ I
Sbjct: 183 ----------------------------LTHVDLSLIPSLFHANVSYNLLS-TLAIPIA- 212
Query: 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFI 354
+ L+ NS + L LK L +N+LT + L N L +
Sbjct: 213 ---VEELDASHNSINVVRGPVNVELTILK---LQHNNLTD-------TAWLLNYPGLVEV 259
Query: 355 DLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNG 413
DLS N ++ I + L Y+ N L
Sbjct: 260 DLSYNELE---------------------------KIMYHPFVKMQRLERLYISNNRLV- 291
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
++ + + L+VL N L + + ++ L L +N + ++ +L
Sbjct: 292 ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTL 347
Query: 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533
+NL+L+ N+ +++ + + ++ + + D
Sbjct: 348 KNLTLSHNDW-DCNSLRAL-FRNVARPAVDDADQHCKIDYQLEHGLCCKESDKPYL---- 401
Query: 534 VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYL 593
D ++ + + + G + ++N + L
Sbjct: 402 ----------DRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGN 451
Query: 594 KDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLL 627
+ L N+L E+ + E + +LL
Sbjct: 452 EQLEAEVNELRAEVQ------QLTNEQIQQEQLL 479
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 6e-33
Identities = 67/327 (20%), Positives = 127/327 (38%), Gaps = 28/327 (8%)
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
I + + + + + + L N K + N+ + L L L
Sbjct: 18 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAAL-----LD 72
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFY 405
+ + +E ++L+ I+ I + H+++ M + +P + N+ L
Sbjct: 73 SFRQVELLNLNDLQIEEI-DTYAFAYA-HTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLV 129
Query: 406 LGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPDEV-CRLAKVYQLDLSNNKLSGSI 463
L N+L+ S+P KL L +N LE I D+ + L LS+N+L+ +
Sbjct: 130 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HV 186
Query: 464 PACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523
+ SL + +++ N L ST + L+ S NS+ + L
Sbjct: 187 D--LSLIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSINV---VRGPVNVELTI 236
Query: 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583
+ NN + + L + L YN L+ + F + L+ L +SNN L ++
Sbjct: 237 LKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-AL 293
Query: 584 PVSLEKLSYLKDLNLSFNKLEGEIPKG 610
+ + + LK L+LS N L + +
Sbjct: 294 NLYGQPIPTLKVLDLSHNHLL-HVERN 319
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 105 bits (262), Expect = 2e-23
Identities = 42/230 (18%), Positives = 82/230 (35%), Gaps = 13/230 (5%)
Query: 383 SDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDE 442
I + ++ + L +++ F ++ + +P
Sbjct: 11 PRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAA 69
Query: 443 V-CRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLN 501
+ +V L+L++ ++ F +++ L + N + + P F N+ + L
Sbjct: 70 LLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129
Query: 502 LSSNSLTGPLPLEI-GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP 560
L N L+ LP I N L + S NN + + LQ L L N L +
Sbjct: 130 LERNDLSS-LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVD 187
Query: 561 DSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610
+ SL N+S N LS +L +++L+ S N + +
Sbjct: 188 --LSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGP 229
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 97.7 bits (243), Expect = 4e-21
Identities = 75/481 (15%), Positives = 148/481 (30%), Gaps = 63/481 (13%)
Query: 56 TALNISHLSLSGTIPSRL-GNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQL 113
T L + LS ++P + N L +L + +N I F +L+ L N+L
Sbjct: 126 TVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRL 183
Query: 114 SGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNL 173
+ + ++ +L N+S N+ S L+ + L S+N + +
Sbjct: 184 T-HVDLSLIPSL---FHANVSYNLL-----STLAIPIAVEELDASHNSIN-VVRGPV--N 231
Query: 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233
+L L L N L + + N L + L N
Sbjct: 232 VELTILKLQHNNLT--------------------------DTAW-LLNYPGLVEVDLSYN 264
Query: 234 KLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYV--RLPNLEELYLWGNHFSGSIPN 290
+L I F M ++ + + NN L ++ +P L+ L L NH +
Sbjct: 265 ELE-KIMYHPFVKMQRLERLYISNNRLV----ALNLYGQPIPTLKVLDLSHNHLL-HVER 318
Query: 291 FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT--SLTLELSFLSSLSNC 348
+L L L NS + LK L L++N SL ++ +
Sbjct: 319 NQPQFDRLENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVD 375
Query: 349 KYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGG 408
+ + G+ ++S + ++ +V + G +
Sbjct: 376 DADQHCKIDYQLEHGLCCKESDKPYLD-RLLQYIALTSVVEKVQRAQGRCSATDTINSVQ 434
Query: 409 NNLNGSIPITLGKLQKLQVLYFPDNKLEGSI----PDEVCRLAKVYQLDLSNNKLSGSIP 464
+ + LQ + L N+L + +++ + + L +
Sbjct: 435 SLSHYITQQGGVPLQGNEQLEAEVNELRAEVQQLTNEQIQQEQLLQGLHAEIDTNLRRYR 494
Query: 465 ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKI 524
LA + + F + + LE N+ + ++
Sbjct: 495 LPKDGLARSSDNLNKVFTHLKE-RQAFKLRETQARRTEADAKQKETEDLEQENIALEKQL 553
Query: 525 D 525
D
Sbjct: 554 D 554
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 2e-12
Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 8/134 (5%)
Query: 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQL 113
V L+ SH S++ + L L L N + + N L + N+L
Sbjct: 212 AVEELDASHNSIN-VVRG--PVNVELTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNEL 266
Query: 114 SGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNL 173
+I + + E L +S N + L++L LS+N + +
Sbjct: 267 E-KIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQF 323
Query: 174 TKLEELYLSFNGLQ 187
+LE LYL N +
Sbjct: 324 DRLENLYLDHNSIV 337
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 6e-41
Identities = 53/293 (18%), Positives = 109/293 (37%), Gaps = 47/293 (16%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIIS 769
LIG+G FG VY R EVA+++ + + K+F E + RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 770 CCSIGDFKALFKALAL--EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
C LA+ +L + + +LD+ + I ++ + YL +
Sbjct: 97 ACMSPPH------LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---H 147
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA---TIGYMALE-- 882
+ ++H DLK NV DN ++DFG+ + + + + ++A E
Sbjct: 148 AKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 883 -------YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935
+ S + DV+ G + E + P F + +I+
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP----F-KTQP---------AEAII 252
Query: 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ + +++ + ++ + C E+R +++ L K+
Sbjct: 253 WQMGTGMK-----PNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 1e-40
Identities = 83/367 (22%), Positives = 148/367 (40%), Gaps = 47/367 (12%)
Query: 643 QHTRRKNTILLGIFLPLST--IFMIAVILLIARNRKRGRQQPNDADMPQEATWRRFSYL- 699
H RR+ ++ GI +P + + I I ++ + + N S L
Sbjct: 13 HHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALN 72
Query: 700 -ELCQATDGFSE---------NNLIGRGGFGSVYKARIQDG----MEVAVKVFNQQCG-R 744
EL QA N +IGRG FG VY + D + AVK N+
Sbjct: 73 PELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 132
Query: 745 AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYIL 804
F E +MK H N++ ++ C + L + L YM HG L ++ + +
Sbjct: 133 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNP 189
Query: 805 DIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864
+ + + VA +++L S +H DL N +L + ++DFG+ + + ++
Sbjct: 190 TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246
Query: 865 QFVTQTQTPAT--IGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMT 921
+T A + +MALE + +T DV++FGV+L E T G P ++ +
Sbjct: 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI- 305
Query: 922 LKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ ++ G L + E C ++ + ++C E R + E+
Sbjct: 306 ------------TVYLLQGRRLLQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 346
Query: 982 VTRLLKI 988
V+R+ I
Sbjct: 347 VSRISAI 353
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 1e-39
Identities = 85/372 (22%), Positives = 132/372 (35%), Gaps = 64/372 (17%)
Query: 262 SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGNLR 320
++P L L N ++ F + L LEL +N S P F NL
Sbjct: 22 RFVAVPEGIPTETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLF 80
Query: 321 NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIF 380
NL+ LGL +N L + L + + LSN L +D+S N I +L +F
Sbjct: 81 NLRTLGLRSNRLKLIPLGV--FTGLSN---LTKLDISENKIVILLDY-----------MF 124
Query: 381 DMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSI 439
+L NL +G N+L I L L+ L
Sbjct: 125 Q---------------DLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQL----------- 157
Query: 440 PDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498
L L+ SIP L L L L + ++ +F L +
Sbjct: 158 -------------TLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 203
Query: 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGS 558
L +S + L + + N + V A+ + L+FL L YN +
Sbjct: 204 VLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTI 263
Query: 559 IPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG--GSFGNF 616
+L+ L+ + L L+ P + L+YL+ LN+S N+L + + S GN
Sbjct: 264 EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHSVGNL 322
Query: 617 SAESFEGNKLLC 628
+ N L C
Sbjct: 323 ETLILDSNPLAC 334
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 4e-33
Identities = 72/343 (20%), Positives = 120/343 (34%), Gaps = 41/343 (11%)
Query: 41 CNWTGVTCDVHSHRVTAL------NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQF 89
C+ H R A+ L L T+ + L+ L L+ N
Sbjct: 9 CSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIV 68
Query: 90 SGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSN 148
S ++ F N+ L+ L N+L IP + + L L++S+N + +
Sbjct: 69 S-AVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQD 126
Query: 149 CTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGF-----LQIFVKNI 202
L+ L + ND I L LE+L L L L +
Sbjct: 127 LYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL---- 181
Query: 203 FVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGS 262
+ H L L+VL + + + + + + + +L+
Sbjct: 182 --RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-- 237
Query: 263 LQSIPYV---RLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGN 318
++PY+ L L L L N S +I + +L ++L + P F
Sbjct: 238 --AVPYLAVRHLVYLRFLNLSYNPIS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRG 294
Query: 319 LRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI 361
L L+ L ++ N LT TLE S S+ N LE + L SN +
Sbjct: 295 LNYLRVLNVSGNQLT--TLEESVFHSVGN---LETLILDSNPL 332
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 1e-39
Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 34/285 (11%)
Query: 712 NLIGRGGFGSVYKARIQDG----MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIK 766
+IGRG FG VY + D + AVK N+ F E +MK H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
++ C + L + L YM HG L ++ + + + + + VA ++YL
Sbjct: 91 LLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT--IGYMALEYG 884
S +H DL N +L + ++DFG+ + + ++ + +T A + +MALE
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 885 SEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
+ +T DV++FGV+L E T G P ++ + + ++ G L
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-------------TVYLLQGRRL 251
Query: 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ E C ++ + ++C E R + E+V+R+ I
Sbjct: 252 LQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 2e-39
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 36/288 (12%)
Query: 714 IGRGGFGSVYKARIQDG----MEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKI 767
+G G FGSV + ++ ++VAVK R + F E MK H N+I++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 768 ISCCSIGDFKALFKAL-ALEYMPHGSLEKYL-----YSSNYILDIFQRLNIMIDVASALE 821
+ C + + K + L +M +G L YL + + + L M+D+A +E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
YL + +H DL N +L D+M ++DFG++K + D + + ++A+
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940
E ++ ++ DV+ FGV + E T G P + N M ++ G
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM-------------YDYLLHG 265
Query: 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
L + E C+ ++ + C P R + +L K+
Sbjct: 266 HRLKQ-------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 2e-39
Identities = 60/289 (20%), Positives = 107/289 (37%), Gaps = 40/289 (13%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKII-SCC 771
+G+G FG K + G + +K + ++F E +VM+ + H N++K I
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
EY+ G+L + S + QR++ D+AS + YL +S +
Sbjct: 78 KDKRL-----NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL---HSMNI 129
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA------------TIGYM 879
IH DL N L+ +N ++DFG+ +L+ E ++ +M
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939
A E + DV++FG++L E + +D
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD-----PDYL-------------PRTMD 231
Query: 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
L R + C F + + C PEKR + ++ L +
Sbjct: 232 FGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 3e-39
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 37/289 (12%)
Query: 714 IGRGGFGSVYKARIQDG----MEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKI 767
+G+G FGSV +A+++ ++VAVK+ + F E MK H ++ K+
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 768 ISCCSIGDFKALFKAL--ALEYMPHGSLEKYLYSS-----NYILDIFQRLNIMIDVASAL 820
+ K L +M HG L +L +S + L + + M+D+A +
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA 880
EYL S IH DL N +L ++M ++DFG+++ + D + + + ++A
Sbjct: 151 EYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 881 LEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939
LE ++ + + DV+ FGV + E T G+ P I N + ++
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-------------YNYLIG 254
Query: 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
G+ L + +CM V+++ +C P++R + + L I
Sbjct: 255 GNRLKQ-------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-38
Identities = 52/330 (15%), Positives = 111/330 (33%), Gaps = 49/330 (14%)
Query: 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNN 330
+ + + ++ + +A + L+L N S + L+ L L++N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 331 HLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGS 390
L L + L +DL++N +
Sbjct: 69 VLYE-------TLDLESLSTLRTLDLNNNYV----------------------------- 92
Query: 391 IPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVY 450
+E+ ++ + NN++ ++ + Q + +Y +NK+ + ++V
Sbjct: 93 --QELLVGPSIETLHAANNNISR---VSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQ 147
Query: 451 QLDLSNNKLSG-SIPACFGDLASLRNLSLASNELISVIPSTFW-NLKDILYLNLSSNSLT 508
LDL N++ + +L +L+L N + V + LK L+LSSN L
Sbjct: 148 YLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLK---TLDLSSNKLA 204
Query: 509 GPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ-GSIPDSFGDLM 567
+ E + + I N +I A+ ++L+ L N G++ D F
Sbjct: 205 F-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQ 262
Query: 568 SLKSLNLSNNNLSGSIPVSLEKLSYLKDLN 597
++++ + L
Sbjct: 263 RVQTVAKQTVKKLTGQNEEECTVPTLGHYG 292
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 2e-38
Identities = 51/294 (17%), Positives = 90/294 (30%), Gaps = 46/294 (15%)
Query: 312 IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371
I N K + ++ L L + ++ +DLS N + I
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASL-----RQSAWNVKELDLSGNPLSQI------- 49
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431
++ T L L N L L L L+ L
Sbjct: 50 -------------------SAADLAPFTKLELLNLSSNVLY-ETL-DLESLSTLRTLDLN 88
Query: 432 DNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTF 491
+N ++ E+ + L +NN +S + +N+ LA+N++ +
Sbjct: 89 NNYVQ-----ELLVGPSIETLHAANNNIS-RVSC--SRGQGKKNIYLANNKITMLRDLDE 140
Query: 492 WNLKDILYLNLSSNSLTG-PLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFL 550
+ YL+L N + + L ++ N V L+ L L
Sbjct: 141 GCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV--VFAKLKTLDL 198
Query: 551 EYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
N L + F + ++L NN L I +L L+ +L N
Sbjct: 199 SSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFH 250
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 4e-37
Identities = 55/381 (14%), Positives = 114/381 (29%), Gaps = 72/381 (18%)
Query: 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVK 200
I N +I +++ + + + ++EL LS N L QI
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLS--------QI--- 49
Query: 201 NIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260
++ LE+L L N L ++ ++ST++ + L NN +
Sbjct: 50 --------------SAADLAPFTKLELLNLSSNVLYET--LDLESLSTLRTLDLNNNYVQ 93
Query: 261 GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLR 320
+ P++E L+ N+ S + + L N + G
Sbjct: 94 ----ELL--VGPSIETLHAANNNIS-RVSCSRG--QGKKNIYLANNKITMLRDLDEGCRS 144
Query: 321 NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIF 380
++ L L N + ++ +S LE ++L N I
Sbjct: 145 RVQYLDLKLNEIDTVNFA-ELAASSDT---LEHLNLQYNFIY------------------ 182
Query: 381 DMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIP 440
+ ++ L L N L + + + +NKL I
Sbjct: 183 ---------DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIE 230
Query: 441 DEVCRLAKVYQLDLSNNKLS-GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILY 499
+ + DL N G++ F ++ ++ + + ++ + + +
Sbjct: 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGH 290
Query: 500 L-NLSSNSLTGPLPLEIGNLK 519
L P + L
Sbjct: 291 YGAYCCEDLPAPFADRLIALG 311
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 5e-37
Identities = 60/358 (16%), Positives = 116/358 (32%), Gaps = 51/358 (14%)
Query: 124 NLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSF 183
N ++ ++ + + S + ++ L LS N + ++ TKLE L LS
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSS 67
Query: 184 NGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEI 243
N L E ++ +L L L L N + E+
Sbjct: 68 NVLY--------------------------ETL-DLESLSTLRTLDLNNNYV-----QEL 95
Query: 244 FNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLEL 303
+I+ + NN++S + R + +YL N + S++ L+L
Sbjct: 96 LVGPSIETLHAANNNIS----RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDL 151
Query: 304 QKNSFSGF-IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362
+ N + L+ L L N + + L+ +DLSSN +
Sbjct: 152 KLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-------VKGQVVFAKLKTLDLSSNKLA 204
Query: 363 GILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN-GSIPITLGK 421
+ + + + + + + I + + NL F L GN + G++ K
Sbjct: 205 FM--GPEFQSAA-GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260
Query: 422 LQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLA 479
Q++Q + K +E C + L +L +
Sbjct: 261 NQRVQTVAKQTVKKLTGQNEEECTV--PTLGHYGAYCCEDLPAPFADRLIALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-35
Identities = 58/363 (15%), Positives = 110/363 (30%), Gaps = 50/363 (13%)
Query: 69 IPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFF 128
I N + + + + ++ + +K L N LS +I +
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLS-QISAADLAPFTKL 60
Query: 129 ESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQG 188
E LNLS N+ + L + + LR L L+ N +E+ +E L+ + N +
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS- 112
Query: 189 AYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMST 248
+ + + + L NK+ + + S
Sbjct: 113 -------------------------RVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSR 145
Query: 249 IQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSF 308
+Q + L+ N + + LE L L N + + +KL L+L N
Sbjct: 146 VQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVVF-AKLKTLDLSSNKL 203
Query: 309 SGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRK 368
+ F+ F + + + L NN L + L F +L + DL N R
Sbjct: 204 A-FMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEH------FDLRGNGFHCGTLRD 256
Query: 369 SVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLG-KLQKLQV 427
+ + + + G +P +L L
Sbjct: 257 FFSKNQRVQTV----AKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALGH 312
Query: 428 LYF 430
+
Sbjct: 313 HHH 315
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 4e-27
Identities = 46/303 (15%), Positives = 92/303 (30%), Gaps = 68/303 (22%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
L++S LS + L + L+ L L SN ++ ++ TL+ L +N + E+
Sbjct: 39 LDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLE--SLSTLRTLDLNNNYVQ-EL 95
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
P E+L+ + N S + + L+ N + G ++++
Sbjct: 96 L-----VGPSIETLHAANNNISRVSCSRGQG---KKNIYLANNKITMLRDLDEGCRSRVQ 147
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237
L L N + + LE L L N +
Sbjct: 148 YLDLKLNEI------------------------DTVNFAELAASSDTLEHLNLQYNFIY- 182
Query: 238 VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASK 297
+ ++ L+ L L N + + +A+
Sbjct: 183 DVKGQVV--------------------------FAKLKTLDLSSNKLA-FMGPEFQSAAG 215
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357
++ + L+ N I +NL+ L N TL F + ++ +
Sbjct: 216 VTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQR----VQTVAKQ 270
Query: 358 SNS 360
+
Sbjct: 271 TVK 273
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 3e-24
Identities = 28/178 (15%), Positives = 68/178 (38%), Gaps = 11/178 (6%)
Query: 438 SIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDI 497
+I + + ++++ L ++ + +++ L L+ N L + + +
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 498 LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG 557
LNLSSN L L + +L L +D + N + ++ L N +
Sbjct: 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS- 112
Query: 558 SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGN 615
+ K++ L+NN ++ + S ++ L+L N+++ + +
Sbjct: 113 RVS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAAS 167
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 9e-14
Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF--NIHTLKLLSFGDNQL 113
+ +++ ++ G S +Q L L N+ ++ F+ + TL+ L+ N +
Sbjct: 123 KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSDTLEHLNLQYNFI 181
Query: 114 SGEIPTNI-CSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGN 172
++ + + L ++L+LS N + + + + L N I K +
Sbjct: 182 Y-DVKGQVVFAKL---KTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRF 235
Query: 173 LTKLEELYLSFNGLQ 187
LE L NG
Sbjct: 236 SQNLEHFDLRGNGFH 250
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 3e-38
Identities = 63/287 (21%), Positives = 118/287 (41%), Gaps = 34/287 (11%)
Query: 710 ENNLIGRGGFGSVYKARIQDG----MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNI 764
+ +IG+G FG VY D ++ A+K ++ + ++F E +M+ + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
+ +I + + L YM HG L +++ S + ++ + VA +EYL
Sbjct: 85 LALIGIMLPPEGLPH---VLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL- 140
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT--IGYMALE 882
+H DL N +L ++ ++DFG+ + + + + Q A + + ALE
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941
R +T DV++FGV+L E T G P I + + G
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL-------------THFLAQGR 245
Query: 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
L + E C ++ + +C P R + +V + +I
Sbjct: 246 RLPQ-------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 4e-38
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 29/288 (10%)
Query: 714 IGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKII 768
+G+G FGSV R G VAVK + F+ E E++KS++H NI+K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
C + L L +EY+P+GSL YL +D + L + +EYL +
Sbjct: 109 GVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 163
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQTQTPATIGYMALEYGSEG 887
IH DL N+L+ + + DFG+TK+L + ++ + + + I + A E +E
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 223
Query: 888 RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947
+ S DV++FGV+L E FT + + E M + G ++
Sbjct: 224 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG-----------NDKQGQMIVFHL 272
Query: 948 IQFVAK-------EQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
I+ + + C ++ + EC + +R + +++ R+ +I
Sbjct: 273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 8e-38
Identities = 84/407 (20%), Positives = 154/407 (37%), Gaps = 61/407 (14%)
Query: 224 NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNH 283
++ + L LN + + + +Q + ++ + +++ + L +L L L N
Sbjct: 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90
Query: 284 FSGSIPNFIFNA-SKLSRLELQKNSF-SGFIPS-TFGNLRNLKRLGLNNNHLTSLTLELS 340
F + FN + L L L + + + F L +L+ L L +N++ +
Sbjct: 91 FL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF 149
Query: 341 FLSSLSNCKYLEFIDLSSNSIDGI-------LSRKSVGNLS-HSLKIFDMSDCNVSGSIP 392
F ++ +DL+ N + I K L S+ + DM++ +
Sbjct: 150 F-LNMRR---FHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKC 205
Query: 393 EEIGNLTNLIGFYLGGNNLNGSIP---ITLGKLQKLQVLYFPDNKLEG---------SIP 440
T++ L GN S+ K+Q L ++ G
Sbjct: 206 GNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPD 265
Query: 441 DEVCR---LAKVYQLDLSNNKLSGSIPAC-FGDLASLRNLSLASNELISVIPSTFWNLKD 496
+ + + V DLS +K+ ++ F L L+LA NE+ + + FW L
Sbjct: 266 NFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324
Query: 497 ILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ 556
+L LNLS N L ++ + L K L+ L L YN ++
Sbjct: 325 LLKLNLSQNFLGS---IDSRMFENLDK---------------------LEVLDLSYNHIR 360
Query: 557 GSIP-DSFGDLMSLKSLNLSNNNLSGSIPVS-LEKLSYLKDLNLSFN 601
++ SF L +LK L L N L S+P ++L+ L+ + L N
Sbjct: 361 -ALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 3e-35
Identities = 90/382 (23%), Positives = 144/382 (37%), Gaps = 40/382 (10%)
Query: 247 STIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQK 305
+ + V L NS++ L + RL +L+ L + I N F S L L+L
Sbjct: 30 AHVNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88
Query: 306 NSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGIL 365
N F F L NL+ L L +L L +F L++ LE + L N+I I
Sbjct: 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTS---LEMLVLRDNNIKKIQ 145
Query: 366 SRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKL 425
N+ + D++ N SI EE L N G + TL +L +
Sbjct: 146 PASFFLNMR-RFHVLDLTF-NKVKSICEED--LLNFQGKHF-----------TLLRLSSI 190
Query: 426 QVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNL--------- 476
+ + L + + LDLS N S+ F D + +
Sbjct: 191 TLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSY 250
Query: 477 ----SLASNELISVIPSTFWNLK--DILYLNLSSNSLTGPLPLEI-GNLKVLVKIDFSMN 529
S TF L+ + +LS + + L + + L ++ + N
Sbjct: 251 NMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA-LLKSVFSHFTDLEQLTLAQN 309
Query: 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPV-SLE 588
+ + NA G+ L L L N L F +L L+ L+LS N++ ++ S
Sbjct: 310 EINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIR-ALGDQSFL 368
Query: 589 KLSYLKDLNLSFNKLEGEIPKG 610
L LK+L L N+L+ +P G
Sbjct: 369 GLPNLKELALDTNQLK-SVPDG 389
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 5e-33
Identities = 78/462 (16%), Positives = 134/462 (29%), Gaps = 91/462 (19%)
Query: 77 SSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135
+ + + L N + + + F + L+ L I N L L L
Sbjct: 30 AHVNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88
Query: 136 NMFHGGIPSALSNCTYLRILRLSYNDF-AGGIPKEI-GNLTKLEELYLSFNGLQGAYDHG 193
N F A + L +L L+ + + LT LE L L N ++
Sbjct: 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS 148
Query: 194 FLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVG 253
F N+R VL L NK+ I E
Sbjct: 149 FFL------------------------NMRRFHVLDLTFNKVK-SICEEDLLNFQ----- 178
Query: 254 LQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIP 313
+ L L ++ +
Sbjct: 179 -----------------GKHFTLLRLSSITL----------------QDMNEYWLGWEKC 205
Query: 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373
++ L L+ N + F D + + L + N+
Sbjct: 206 GNPFKNTSITTLDLSGNGFKESMAK-------------RFFDAIAGTKIQSLILSNSYNM 252
Query: 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITL-GKLQKLQVLYFPD 432
S + D + E + L + + ++ ++ L+ L
Sbjct: 253 GSSFGHTNFKDPDNFTFKGLEASGVKTC---DLSKSKIF-ALLKSVFSHFTDLEQLTLAQ 308
Query: 433 NKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSIPAC-FGDLASLRNLSLASNELISVIPST 490
N++ I D L + +L+LS N L SI + F +L L L L+ N + ++ +
Sbjct: 309 NEIN-KIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIRALGDQS 366
Query: 491 FWNLKDILYLNLSSNSLTGPLPLEI-GNLKVLVKIDFSMNNF 531
F L ++ L L +N L +P I L L KI N +
Sbjct: 367 FLGLPNLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 9e-20
Identities = 45/264 (17%), Positives = 88/264 (33%), Gaps = 23/264 (8%)
Query: 368 KSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQ 426
V L + D+S +++ L +L + I T L L
Sbjct: 23 HQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLI 82
Query: 427 VLYFPDNKLEGSIPDEV-CRLAKVYQLDLSNNKL-SGSIPA-CFGDLASLRNLSLASNEL 483
+L N+ + LA + L L+ L + F L SL L L N +
Sbjct: 83 ILKLDYNQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNI 141
Query: 484 ISVIPST-FWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGI 542
+ P++ F N++ L+L+ N + ++ N + +++
Sbjct: 142 KKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS------------ 189
Query: 543 KDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIP---VSLEKLSYLKDLNLS 599
+ + L + S+ +L+LS N S+ + ++ L LS
Sbjct: 190 --ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247
Query: 600 FNKLEGEIPKGGSFGNFSAESFEG 623
+ G +F + +F+G
Sbjct: 248 NSYNMGSSFGHTNFKDPDNFTFKG 271
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 7e-05
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 59 NISHLSLSG----TIPSRL-GNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQ 112
++ L+LS +I SR+ NL L+ L L N ++ F + LK L+ NQ
Sbjct: 324 HLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIR-ALGDQSFLGLPNLKELALDTNQ 382
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMFH 139
L +P I L + + L N +
Sbjct: 383 LK-SVPDGIFDRLTSLQKIWLHTNPWD 408
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 1e-37
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 29/288 (10%)
Query: 714 IGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKII 768
+G+G FGSV R G VAVK + F+ E E++KS++H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
C + L L +EY+P+GSL YL +D + L + +EYL +
Sbjct: 78 GVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 132
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQTQTPATIGYMALEYGSEG 887
IH DL N+L+ + + DFG+TK+L + ++ F + + I + A E +E
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 888 RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947
+ S DV++FGV+L E FT + + E M + G ++
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG-----------NDKQGQMIVFHL 241
Query: 948 IQFVAK-------EQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
I+ + + C ++ + EC + +R + +++ R+ +I
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 1e-37
Identities = 60/284 (21%), Positives = 118/284 (41%), Gaps = 21/284 (7%)
Query: 714 IGRGGFGSVYKAR-----IQDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG V R G +VAVK + G E E+++++ H NI+K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
C+ + L +E++P GSL++YL + +++ Q+L + + ++YL
Sbjct: 89 KGICTEDGGNGIK--LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---G 143
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQTQTPATIGYMALEYGSE 886
S +H DL NVL+ + DFG+TK + ++ + + + + + A E +
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQ 203
Query: 887 GRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV-DGSLLS 944
+ DV++FGV L E T ++ + + + ++ + +G L
Sbjct: 204 SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP 263
Query: 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
C V+ + +C P R + + ++ +
Sbjct: 264 C-------PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 2e-37
Identities = 68/286 (23%), Positives = 112/286 (39%), Gaps = 32/286 (11%)
Query: 714 IGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKII 768
+G+G FGSV R G VAVK + F E +++K++ I+K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
++L L +EY+P G L +L LD + L + +EYL S
Sbjct: 91 GVSYGPGRQSLR--LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GS 145
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL-TREDQFVTQTQTPATIGYMALEYGSEG 887
+H DL N+L+ ++DFG+ KLL +D +V + + I + A E S+
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 888 RVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946
S DV++FGV+L E FT K + +M
Sbjct: 206 IFSRQSDVWSFGVVLYELFTYCDKS-------------CSPSAEFLRMMGCERDVPALSR 252
Query: 947 DIQFVAK-------EQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
++ + + C + V + C SP+ R + + +L
Sbjct: 253 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 1e-36
Identities = 63/317 (19%), Positives = 121/317 (38%), Gaps = 31/317 (9%)
Query: 273 NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHL 332
+L + +P + + L+LQ N + F NL+NL L L NN +
Sbjct: 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 88
Query: 333 TSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP 392
+ + + L LE + LS N + + + +L+ + + ++ +
Sbjct: 89 SKI--SPGAFAPLVK---LERLYLSKNQLKEL-----PEKMPKTLQELRVHENEIT-KVR 137
Query: 393 EEI-GNLTNLIGFYLGGNNLNGSI--PITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKV 449
+ + L +I LG N L S ++KL + D + +IP + +
Sbjct: 138 KSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSL 194
Query: 450 YQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT 508
+L L NK++ + A L +L L L+ N + +V + N + L+L++N L
Sbjct: 195 TELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253
Query: 509 GPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIG------GIKDLQFLFLEYNILQGSI--P 560
+P + + K + + NN S + N + L N +Q P
Sbjct: 254 K-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQP 312
Query: 561 DSFGDLMSLKSLNLSNN 577
+F + ++ L N
Sbjct: 313 STFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 9e-30
Identities = 71/363 (19%), Positives = 124/363 (34%), Gaps = 70/363 (19%)
Query: 78 SLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNM 137
L+ + +P + LL +N+++ EI NL +L L N
Sbjct: 32 HLRVVQCSDLGLE-KVPKDLPP--DTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNK 87
Query: 138 FHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQI 197
P A + L L LS N +P+++ L+EL + N +
Sbjct: 88 ISKISPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELRVHENEIT---------- 134
Query: 198 FVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNKL-VGVIPAEIF-NMSTIQGVGL 254
++ + L + V+ LG N L I F M + + +
Sbjct: 135 ----------------KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRI 178
Query: 255 QNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA-SKLSRLELQKNSFSGFIP 313
+ +++ +IP P+L EL+L GN + + + L++L L NS S
Sbjct: 179 ADTNIT----TIPQGLPPSLTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSISAVDN 233
Query: 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373
+ N +L+ L LNNN L + L++ KY++ + L +N+I I S
Sbjct: 234 GSLANTPHLRELHLNNNKLVKVP------GGLADHKYIQVVYLHNNNISAIGSN------ 281
Query: 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI--PITLGKLQKLQVLYFP 431
P + G L N + P T + +
Sbjct: 282 --------------DFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLG 327
Query: 432 DNK 434
+ K
Sbjct: 328 NYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 7e-29
Identities = 66/359 (18%), Positives = 125/359 (34%), Gaps = 78/359 (21%)
Query: 110 DNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKE 169
D L ++P ++ + L+L N N L L L N + P
Sbjct: 40 DLGLE-KVPKDLPPDT---ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA 95
Query: 170 IGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLA 229
L KLE LYLS N L+ E+P ++ + L+ L
Sbjct: 96 FAPLVKLERLYLSKNQLK--------------------------ELPEKM--PKTLQELR 127
Query: 230 LGLNKLVGVIPAEIF-NMSTIQGVGLQNNSL-SGSLQSIPYVRLPNLEELYLWGNHFSGS 287
+ N++ + +F ++ + V L N L S +++ + + L + + + + +
Sbjct: 128 VHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-T 185
Query: 288 IPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSN 347
IP + L+ L L N + ++ L NL +LGL+ N ++++ SL+N
Sbjct: 186 IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNG-----SLAN 238
Query: 348 CKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLG 407
+L + L++N + +P + + + YL
Sbjct: 239 TPHLRELHLNNNKLV---------------------------KVPGGLADHKYIQVVYLH 271
Query: 408 GNNLNG------SIPITLGKLQKLQVLYFPDNKLE-GSIPDEVCR-LAKVYQLDLSNNK 458
NN++ P K + N ++ I R + + L N K
Sbjct: 272 NNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-26
Identities = 59/340 (17%), Positives = 113/340 (33%), Gaps = 60/340 (17%)
Query: 41 CNWTGVTCDVHSHRVTAL------NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQF 89
C + + + + L L I NL +L +L L +N+
Sbjct: 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 88
Query: 90 SGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSN 148
S I F + L+ L NQL E+P + L + L + +N S +
Sbjct: 89 S-KISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTL---QELRVHENEITKVRKSVFNG 143
Query: 149 CTYLRILRLSYNDF-AGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQF 206
+ ++ L N + GI + KL + ++ +
Sbjct: 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT------------------- 184
Query: 207 SHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQS 265
IP G +L L L NK+ + A ++ + +GL NS+S ++ +
Sbjct: 185 -------TIPQ--GLPPSLTELHLDGNKI-TKVDAASLKGLNNLAKLGLSFNSIS-AVDN 233
Query: 266 IPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFG------NL 319
P+L EL+L N +P + + + + L N+ S + F
Sbjct: 234 GSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKK 292
Query: 320 RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359
+ + L +N + ++ S + + L +
Sbjct: 293 ASYSGVSLFSNPVQYWEIQPSTFRCVYV---RAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 18/240 (7%)
Query: 376 SLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNK 434
L++ SD + +P+++ + L L N + L+ L L +NK
Sbjct: 32 HLRVVQCSDLGLE-KVPKDLPPDTALL---DLQNNKITEIKDGDFKNLKNLHTLILINNK 87
Query: 435 LEGSIPDEV-CRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWN 493
+ I L K+ +L LS N+L +P +L+ L + NE+ V S F
Sbjct: 88 IS-KISPGAFAPLVKLERLYLSKNQLK-ELPE--KMPKTLQELRVHENEITKVRKSVFNG 143
Query: 494 LKDILYLNLSSNSLTGPLPLEIG---NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFL 550
L ++ + L +N L +E G +K L I + N + + L L L
Sbjct: 144 LNQMIVVELGTNPLK-SSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPS---LTELHL 199
Query: 551 EYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610
+ N + S L +L L LS N++S SL +L++L+L+ NKL ++P G
Sbjct: 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 258
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-36
Identities = 93/517 (17%), Positives = 172/517 (33%), Gaps = 81/517 (15%)
Query: 117 IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLTK 175
+P ++ ++L+LS+N +S + LR+LRLS+N + +
Sbjct: 46 VPKDLPPRT---KALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-LDFHVFLFNQD 101
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
LE L +S N LQ I + +L L L N
Sbjct: 102 LEYLDVSHNRLQ--------------------------NIS--CCPMASLRHLDLSFNDF 133
Query: 236 VGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNF--- 291
+ + F N++ + +GL + + + + +L + + S I
Sbjct: 134 DVLPVCKEFGNLTKLTFLGLSAAKF----RQLDLLPVAHLHLSCILLDLVSYHIKGGETE 189
Query: 292 IFNASKLSRLELQKNS--------FSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLS 343
+ L L + L N+K N L + EL+
Sbjct: 190 SLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGP 249
Query: 344 SLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIG 403
+L N L+ I+ + + + + ++ + ++ I E +
Sbjct: 250 TLLNVT-LQHIETTWKCSVKLFQFFWPRPVEY----LNIYNLTITERIDREEFTYSET-- 302
Query: 404 FYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSI 463
L+ L + + + S A++ LS +
Sbjct: 303 -----------------ALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIH 345
Query: 464 PACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT--GPLPLEIGNLKVL 521
C +S L+ N + LK + L L N L + L N+ L
Sbjct: 346 MVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSL 405
Query: 522 VKIDFSMNNF-SGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLS 580
+D S+N+ S + + L L N+L GS+ +K L+L NN +
Sbjct: 406 ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPP--KVKVLDLHNNRIM 463
Query: 581 GSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
SIP + L L++LN++ N+L+ +P G F +
Sbjct: 464 -SIPKDVTHLQALQELNVASNQLK-SVPD-GVFDRLT 497
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 2e-34
Identities = 102/552 (18%), Positives = 187/552 (33%), Gaps = 70/552 (12%)
Query: 38 ISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSI 97
+ G + + ++ S+ +L+ +P ++L L N S +
Sbjct: 16 CALALIVGSMTPFSNELESMVDYSNRNLT-HVPK--DLPPRTKALSLSQNSIS-ELRMPD 71
Query: 98 FNIHT-LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILR 156
+ + L++L N++ + ++ E L++S N +++ LR L
Sbjct: 72 ISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQNISCCPMAS---LRHLD 127
Query: 157 LSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI 215
LS+NDF + KE GNLTKL L LS + L + ++ S
Sbjct: 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184
Query: 216 PNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLE 275
E +L+ L L NSL ++ L +L+
Sbjct: 185 GGETESLQIPNTTVLHLV--------------------FHPNSLFSVQVNMSVNALGHLQ 224
Query: 276 ELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335
LS ++L + + R L + H+ +
Sbjct: 225 ----------------------LSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETT 262
Query: 336 TLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI 395
L + +E++++ + +I + R+ +LK + + +
Sbjct: 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKE 322
Query: 396 G---NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQL 452
+ L ++ + L F N S+ L ++ L
Sbjct: 323 ALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTL 382
Query: 453 DLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNL----KDILYLNLSSNSLT 508
L N L + ++ +L L S+ + + IL LNLSSN LT
Sbjct: 383 ILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLT 441
Query: 509 GPLPLEI-GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDL 566
G + + +KVL D N IP + ++ LQ L + N L+ S+PD F L
Sbjct: 442 GSVFRCLPPKVKVL---DLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRL 496
Query: 567 MSLKSLNLSNNN 578
SL+ + L +N
Sbjct: 497 TSLQYIWLHDNP 508
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 3e-16
Identities = 62/366 (16%), Positives = 117/366 (31%), Gaps = 49/366 (13%)
Query: 6 SNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSL 65
T L + H+ P + F+ N S++ + LN +
Sbjct: 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQL-------SNIKLNDENCQR 237
Query: 66 SGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNI---HTLKLLSFGDNQLSG----EIP 118
T S L +L ++ L + + +F ++ L+ + ++ E
Sbjct: 238 LMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEF 297
Query: 119 TNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEE 178
T + L ++ +F + S + I LS +D + +
Sbjct: 298 TYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTF 357
Query: 179 LYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL--V 236
L + N + G L+ L+ L L N L
Sbjct: 358 LNFTQNVFTDSVFQGC-------------------------STLKRLQTLILQRNGLKNF 392
Query: 237 GVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNAS 296
+ NMS+++ + + NSL+ ++ L L N +GS+ +
Sbjct: 393 FKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL--PP 450
Query: 297 KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDL 356
K+ L+L N IP +L+ L+ L + +N L S+ L++I L
Sbjct: 451 KVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPD-----GVFDRLTSLQYIWL 504
Query: 357 SSNSID 362
N D
Sbjct: 505 HDNPWD 510
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 2e-36
Identities = 99/532 (18%), Positives = 185/532 (34%), Gaps = 62/532 (11%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHT-LKLLSFGDNQLS 114
++ S L +P L L + N S + S + L++L N++
Sbjct: 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQ 58
Query: 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNL 173
+ ++ E L+LS N N L+ L LS+N F I KE GN+
Sbjct: 59 -YLDISVFKFNQELEYLDLSHNKLVKISCHPTVN---LKHLDLSFNAFDALPICKEFGNM 114
Query: 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233
++L+ L LS L+ + + + + + + + E + L++ +L +
Sbjct: 115 SQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKE---DPEGLQDFNTESLHIV 171
Query: 234 KLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293
I ++S L+ +++ + + + + + N
Sbjct: 172 FPTNKEFHFILDVSVKTVANLELSNIK---------CVLEDNKCSYFLSILAKLQTNPKL 222
Query: 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353
+ L+ +E NSF + + ++N L F S ++ K L
Sbjct: 223 SNLTLNNIETTWNSFIRIL--QLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSI 280
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
+ S+ S I++ +N+ +
Sbjct: 281 HQVVSDVFGFPQSY-----------IYE---------------IFSNMNIKNFTVSGTRM 314
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPAC---FGDL 470
+ K+ L F +N L ++ + L ++ L L N+L + +
Sbjct: 315 VHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQM 373
Query: 471 ASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSLT-GPLPLEIGNLKVLVKIDFSM 528
SL+ L ++ N + K +L LN+SSN LT +KVL D
Sbjct: 374 KSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVL---DLHS 430
Query: 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLMSLKSLNLSNNNL 579
N IP + ++ LQ L + N L+ S+PD F L SL+ + L N
Sbjct: 431 NKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 141 bits (356), Expect = 2e-35
Identities = 94/505 (18%), Positives = 172/505 (34%), Gaps = 57/505 (11%)
Query: 130 SLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA 189
++ SKN +P LS IL +S N + +I +L+KL L +S N +Q
Sbjct: 4 LVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-- 58
Query: 190 YDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNKLVGVIPAEIFNMST 248
+ + + LE L L NKLV + N+
Sbjct: 59 ------------------------YLDISVFKFNQELEYLDLSHNKLVKISCHPTVNLKH 94
Query: 249 IQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSF 308
+ L N+ + + L+ L L H S I + + L + ++
Sbjct: 95 L---DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETY 151
Query: 309 SGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSS----NSIDGI 364
L++ L+ T+ S+ LE ++ N
Sbjct: 152 GEKED--PEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYF 209
Query: 365 LSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNL---TNLIGFYLGGNNLNG-----SIP 416
LS + + L +++ + + I L T + F + L G
Sbjct: 210 LSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFD 269
Query: 417 ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNL 476
+ L+ L + + + + + + + C ++ +L
Sbjct: 270 YSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHL 329
Query: 477 SLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG---NLKVLVKIDFSMNNFSG 533
++N L + +L ++ L L N L L +K L ++D S N+ S
Sbjct: 330 DFSNNLLTDTVFENCGHLTELETLILQMNQLKE-LSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 534 VIPNAI-GGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSY 592
K L L + NIL +I +K L+L +N + SIP + KL
Sbjct: 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--PPRIKVLDLHSNKIK-SIPKQVVKLEA 445
Query: 593 LKDLNLSFNKLEGEIPKGGSFGNFS 617
L++LN++ N+L+ +P G F +
Sbjct: 446 LQELNVASNQLK-SVPD-GIFDRLT 468
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 3e-35
Identities = 90/474 (18%), Positives = 166/474 (35%), Gaps = 37/474 (7%)
Query: 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQL 113
T LNIS +S S + +LS L+ L + N+ + S+F L+ L N+L
Sbjct: 23 TTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDISVFKFNQELEYLDLSHNKL 81
Query: 114 SGEIPTNICSNLPFFESLNLSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGN 172
+I C + L+LS N F I N + L+ L LS I +
Sbjct: 82 V-KIS---CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAH 137
Query: 173 LTKLEELYLSFNGLQGAYDHGFLQIFV--KNIFVQFSHNFSKCEIPNEIGNLRNLEVLAL 230
L + L + D LQ F V ++ + + + NLE+ +
Sbjct: 138 LNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNI 197
Query: 231 GLNKLVGV------IPAEIFNMSTIQGVGLQNNSLSG--SLQSIPYVRLPNLEELYLWGN 282
I A++ + + L N + ++ + V + +
Sbjct: 198 KCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNV 257
Query: 283 HFSGSIPNFIFNAS-----KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTL 337
G + F+ S LS ++ + F + N+ + +
Sbjct: 258 KLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMV-- 315
Query: 338 ELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIG- 396
+ S +D S+N + + G+L+ L+ + + + +
Sbjct: 316 ---HMLCPSKISPFLHLDFSNNLLTDTVFENC-GHLT-ELETLILQMNQLK-ELSKIAEM 369
Query: 397 --NLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453
+ +L + N+++ + L L N L +I C ++ LD
Sbjct: 370 TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR--CLPPRIKVLD 427
Query: 454 LSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507
L +NK+ SIP L +L+ L++ASN+L SV F L + + L +N
Sbjct: 428 LHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 98.8 bits (246), Expect = 1e-21
Identities = 53/340 (15%), Positives = 115/340 (33%), Gaps = 50/340 (14%)
Query: 6 SNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSL 65
+N ++KT + +N ++ S+ + + +++ L ++++
Sbjct: 174 TNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLS-ILAKLQTNPKLSNLTLNNIET 232
Query: 66 SGTIPSRLGNL---SSLQSLFLHSNQFSGSIPFSIF-----NIHTLKLLSFGDNQLSGEI 117
+ R+ L +++ + + + G + F F ++ L + +
Sbjct: 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFG-FP 291
Query: 118 PTNICSNLPFFESLNLSKN---MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT 174
+ I N + + M H PS +S L S N + + G+LT
Sbjct: 292 QSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP---FLHLDFSNNLLTDTVFENCGHLT 348
Query: 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIG---NLRNLEVLALG 231
+LE L L N L+ E+ +++L+ L +
Sbjct: 349 ELETLILQMNQLK--------------------------ELSKIAEMTTQMKSLQQLDIS 382
Query: 232 LNKLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPN 290
N + ++ + + +N L+ +I P ++ L L N SIP
Sbjct: 383 QNSVSYDEKKGDCSWTKSLLSLNMSSNILT---DTIFRCLPPRIKVLDLHSNKIK-SIPK 438
Query: 291 FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNN 330
+ L L + N F L +L+++ L+ N
Sbjct: 439 QVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 7e-11
Identities = 42/223 (18%), Positives = 77/223 (34%), Gaps = 12/223 (5%)
Query: 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHT-LKLLSFGDN 111
++ + S++ + + + + + L F +N
Sbjct: 276 KALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSG-TRMVHMLCPSKISPFLHLDFSNN 334
Query: 112 QLSGEIPTNICSNLPFFESLNLSKNMFH--GGIPSALSNCTYLRILRLSYNDFAGGIPKE 169
L+ + C +L E+L L N I + L+ L +S N + K
Sbjct: 335 LLT-DTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKG 393
Query: 170 I-GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVL 228
L L +S N L D F + + + N K IP ++ L L+ L
Sbjct: 394 DCSWTKSLLSLNMSSNILT---DTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQEL 449
Query: 229 ALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYVR 270
+ N+L +P IF ++++Q + L N S I Y+
Sbjct: 450 NVASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 491
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 2e-36
Identities = 62/298 (20%), Positives = 124/298 (41%), Gaps = 44/298 (14%)
Query: 714 IGRGGFGSVYKARIQDG------MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIK 766
+G+G FG VY+ + VA+K N+ R F E VMK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYL---------YSSNYILDIFQRLNIMIDVA 817
++ S G + +E M G L+ YL + + + + ++A
Sbjct: 93 LLGVVSQGQ--PTL--VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
+ YL + +H DL N ++ ++ + DFG+T+ + D + + +
Sbjct: 149 DGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
+M+ E +G +T DV++FGV+L E T ++P + NE + +
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-------------LRF 252
Query: 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994
+++G LL + + C +F + C +P+ R + EI++ + + + F
Sbjct: 253 VMEGGLLDK-------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR 303
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 6e-36
Identities = 62/290 (21%), Positives = 114/290 (39%), Gaps = 35/290 (12%)
Query: 714 IGRGGFGSVYKARIQD-----GMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG V G VAVK G + + E ++++++ H +IIK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
CC +L L +EY+P GSL YL + + + Q L + + YL+
Sbjct: 99 KGCCEDAGAASLQ--LVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH--- 151
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQTQTPATIGYMALEYGSE 886
+ IH DL NVLL ++ + + DFG+ K + + + + + + + A E E
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 211
Query: 887 GRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945
+ DV++FGV L E T + ++ I G +
Sbjct: 212 YKFYYASDVWSFGVTLYELLTHCDSS-------------QSPPTKFLELIGIAQGQMTVL 258
Query: 946 EDIQFVAK-------EQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ + + ++C + V+++ C R + ++ L +
Sbjct: 259 RLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-35
Identities = 85/297 (28%), Positives = 131/297 (44%), Gaps = 49/297 (16%)
Query: 714 IGRGGFGSVYKARI------QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG V+ A +D M VAVK A K F E E++ +++H +I+K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYL---------------YSSNYILDIFQRLNI 812
C GD L + EYM HG L K+L + L + Q L+I
Sbjct: 83 YGVCGDGD--PLI--MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT 872
+AS + YL S +H DL N L+G N++ + DFG+++ + D + T
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 873 PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLL 931
I +M E + +T DV++FGV+L E FT GK+P ++ N +
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV----------- 244
Query: 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
I I G +L R C V+++ + C P++R+N KEI L +
Sbjct: 245 --IECITQGRVLER-------PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 2e-35
Identities = 70/278 (25%), Positives = 116/278 (41%), Gaps = 30/278 (10%)
Query: 714 IGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCC 771
IGRG FG V+ R++ D VAVK + F E ++K H NI+++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ ++ + +E + G +L + L + L ++ D A+ +EYL S
Sbjct: 182 TQKQ--PIY--IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCC 234
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVST 891
IH DL N L+ + V +SDFG+++ + + + A E + GR S+
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 892 NGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQF 950
DV++FG++L ETF+ G P ++ + + G L
Sbjct: 295 ESDVWSFGILLWETFSLGASPY-----PNLSNQQ-T-------REFVEKGGRLPCP---- 337
Query: 951 VAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
E C VF + +C P +R + I L I
Sbjct: 338 ---ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 2e-35
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 714 IGRGGFGSVYKARIQDGME-----VAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG+V+K E V +KV + G ++F++ + S+ H +I+++
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ C +L L +Y+P GSL ++ L LN + +A + YL
Sbjct: 81 LGLCPG---SSLQ--LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE--- 132
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG 887
++H +L NVLL ++DFG+ LL +D+ + ++ I +MALE G
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 192
Query: 888 RVSTNGDVYNFGVMLMETFT-GKKP 911
+ + DV+++GV + E T G +P
Sbjct: 193 KYTHQSDVWSYGVTVWELMTFGAEP 217
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 3e-35
Identities = 68/328 (20%), Positives = 115/328 (35%), Gaps = 53/328 (16%)
Query: 262 SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGNLR 320
L+++P P+ L L N S + F L L L N S F LR
Sbjct: 44 GLKAVPKEISPDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLR 102
Query: 321 NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIF 380
L++L ++ NHL + L S+ L + N I
Sbjct: 103 KLQKLYISKNHLVEIPPNL-----PSSLVEL---RIHDNRI------------------- 135
Query: 381 DMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNL-NGSIPITLGKLQKLQVLYFPDNKLEGS 438
+P+ + L N+ +GGN L N KL L + KL
Sbjct: 136 --------RKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-G 186
Query: 439 IPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDI 497
IP ++ + +L L +NK+ +I + L L L N++ + + L +
Sbjct: 187 IPKDL--PETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTL 243
Query: 498 LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKD------LQFLFLE 551
L+L +N L+ +P + +LK+L + NN + V N + + L
Sbjct: 244 RELHLDNNKLSR-VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLF 302
Query: 552 YNILQGSI--PDSFGDLMSLKSLNLSNN 577
N + P +F + ++ N
Sbjct: 303 NNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 8e-29
Identities = 61/293 (20%), Positives = 108/293 (36%), Gaps = 30/293 (10%)
Query: 346 SNCK-YLEFIDLSSNSIDGILSRKSV-GNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIG 403
C +L + S + K+V +S + D+ + ++S ++ L +L
Sbjct: 29 FGCHCHLRVVQCSDLGL------KAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYA 82
Query: 404 FYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSI 463
L N ++ L+KLQ LY N L IP + + + +L + +N++ +
Sbjct: 83 LVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIR-KV 138
Query: 464 PA-CFGDLASLRNLSLASNEL--ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKV 520
P F L ++ + + N L P F LK + YL +S LTG + +
Sbjct: 139 PKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLK-LNYLRISEAKLTG---IPKDLPET 194
Query: 521 LVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLS 580
L ++ N + + L L L +N ++ S L +L+ L+L NN LS
Sbjct: 195 LNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254
Query: 581 GSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNL 633
+P L L L+ + L N + F
Sbjct: 255 -RVPAGLPDLKLLQVVYLHTNNIT----------KVGVNDFCPVGFGVKRAYY 296
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 6e-25
Identities = 61/312 (19%), Positives = 92/312 (29%), Gaps = 69/312 (22%)
Query: 59 NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQ 112
+ + L L + L L +L L +N+ S I F + L+ L N
Sbjct: 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS-KIHEKAFSPLRKLQKLYISKNH 113
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFA-GGIPKEIG 171
L EIP N+ S+L L + N S + + + N G
Sbjct: 114 LV-EIPPNLPSSL---VELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF 169
Query: 172 NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALG 231
+ KL L +S L IP L L L
Sbjct: 170 DGLKLNYLRISEAKLT--------------------------GIPK--DLPETLNELHLD 201
Query: 232 LNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNF 291
NK+ I E R L L L N I N
Sbjct: 202 HNKIQ-AIELEDLL------------------------RYSKLYRLGLGHNQIR-MIENG 235
Query: 292 IF-NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLE-LSFLSSLSNCK 349
L L L N S +P+ +L+ L+ + L+ N++T + + +
Sbjct: 236 SLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRA 294
Query: 350 YLEFIDLSSNSI 361
Y I L +N +
Sbjct: 295 YYNGISLFNNPV 306
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-23
Identities = 61/293 (20%), Positives = 105/293 (35%), Gaps = 55/293 (18%)
Query: 53 HRVTALNISHLSLSGTIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDN 111
+ AL + + +S I + L LQ L++ N IP ++ +L L DN
Sbjct: 78 QHLYALVLVNNKIS-KIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDN 133
Query: 112 QLSGEIPTNICSNLPFFESLNLSKN-MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI 170
++ ++P + S L + + N + + G + L LR+S G IPK
Sbjct: 134 RIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPK-- 189
Query: 171 GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLA 229
L EL+L N +Q I E L L
Sbjct: 190 DLPETLNELHLDHNKIQ--------------------------AIELEDLLRYSKLYRLG 223
Query: 230 LGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYV--RLPNLEELYLWGNHFSG 286
LG N++ +I + T++ + L NN LS +P L L+ +YL N+ +
Sbjct: 224 LGHNQI-RMIENGSLSFLPTLRELHLDNNKLS----RVPAGLPDLKLLQVVYLHTNNIT- 277
Query: 287 SIPNFIF-------NASKLSRLELQKN--SFSGFIPSTFGNLRNLKRLGLNNN 330
+ F + + + L N + P+TF + + + N
Sbjct: 278 KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 7e-11
Identities = 32/189 (16%), Positives = 58/189 (30%), Gaps = 18/189 (9%)
Query: 59 NISHLSLSG------TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ 112
N++ + + G + L L + + + IP + TL L N+
Sbjct: 148 NMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDLP--ETLNELHLDHNK 204
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGN 172
+ I L L N +LS LR L L N + +P + +
Sbjct: 205 IQ-AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPD 262
Query: 173 LTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQ-----FSHNFSKC-EIPNEI-GNLRNL 225
L L+ +YL N + + F + +N E+ + +
Sbjct: 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDR 322
Query: 226 EVLALGLNK 234
+ G K
Sbjct: 323 LAIQFGNYK 331
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 3e-35
Identities = 72/309 (23%), Positives = 122/309 (39%), Gaps = 44/309 (14%)
Query: 688 PQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGME-----VAVKVFNQQC 742
P +A R E + ++G G FG+VYK E VA+K +
Sbjct: 4 PNQALLRILKETEF-------KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 56
Query: 743 G-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN 801
+A K E VM S+ + ++ +++ C + L + MP G L Y+
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHK 111
Query: 802 YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861
+ LN + +A + YL ++H DL NVL+ ++DFG+ KLL
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGM 920
E++ I +MALE + DV+++GV + E T G KP +G+
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223
Query: 921 TLKHWVNDWLLISIMKIVD-GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAK 979
I I++ G L + I C V+ + +C + + R +
Sbjct: 224 PASE---------ISSILEKGERLPQPPI-------CTIDVYMIMRKCWMIDADSRPKFR 267
Query: 980 EIVTRLLKI 988
E++ K+
Sbjct: 268 ELIIEFSKM 276
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 9e-35
Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 30/276 (10%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
IG G FG V+ + +VA+K + + + F E EVM + H ++++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833
+ L E+M HG L YL + + L + +DV + YL VIH
Sbjct: 75 QA--PIC--LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIH 127
Query: 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNG 893
DL N L+G+N V +SDFG+T+ + +DQ+ + T T + + + E S R S+
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 894 DVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVA 952
DV++FGV++ E F+ GK P E + V I G L +
Sbjct: 187 DVWSFGVLMWEVFSEGKIPY-----ENRSNSEVVE--------DISTGFRLYK------- 226
Query: 953 KEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ V+ + C E PE R ++ +L +I
Sbjct: 227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 1e-34
Identities = 66/292 (22%), Positives = 115/292 (39%), Gaps = 44/292 (15%)
Query: 714 IGRGGFGSVYKARIQDG------MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIK 766
+G G FG VY+ ++ ++VAVK + C + F +E ++ H+NI++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSS------NYILDIFQRLNIMIDVASAL 820
I F + +E M G L+ +L + L + L++ D+A
Sbjct: 98 CIGVSLQSL--PRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 821 EYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
+YL IH D+ N LL G VA + DFG+ + + R + +
Sbjct: 154 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
+M E EG ++ D ++FGV+L E F+ G P N+ + +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-------------LEF 257
Query: 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ G + + C V+ + +C PE R N I+ R+
Sbjct: 258 VTSGGRMDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 2e-34
Identities = 77/296 (26%), Positives = 125/296 (42%), Gaps = 48/296 (16%)
Query: 714 IGRGGFGSVYKARIQDG------MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG V+ A + M VAVK + A + F E E++ ++H++I++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSS--------------NYILDIFQRLNIM 813
C+ G L + EYM HG L ++L S L + Q L +
Sbjct: 109 FGVCTEGR--PLL--MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP 873
VA+ + YL +H DL N L+G +V + DFG+++ + D + +T
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 874 ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLI 932
I +M E + +T DV++FGV+L E FT GK+P ++ N
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA------------ 269
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
I I G L R C V+ + C P++R + K++ RL +
Sbjct: 270 -IDCITQGRELER-------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 2e-34
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 58/306 (18%)
Query: 714 IGRGGFGSVYKARIQDG------MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIK 766
+G G FG V KA VAVK+ + + E V+K + H ++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSS-----------------------NYI 803
+ CS L L +EY +GSL +L S
Sbjct: 91 LYGACSQDG--PLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 804 LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
L + ++ ++ ++YL ++H DL N+L+ + +SDFG+++ + E
Sbjct: 147 LTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTL 922
D +V ++Q + +MA+E + +T DV++FGV+L E T G P I E +
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL-- 261
Query: 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
+ G + R + C ++ + ++C + P+KR +I
Sbjct: 262 -----------FNLLKTGHRMER-------PDNCSEEMYRLMLQCWKQEPDKRPVFADIS 303
Query: 983 TRLLKI 988
L K+
Sbjct: 304 KDLEKM 309
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 3e-34
Identities = 67/292 (22%), Positives = 115/292 (39%), Gaps = 44/292 (15%)
Query: 714 IGRGGFGSVYKARIQDG------MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIK 766
+G G FG VY+ ++ ++VAVK + C + F +E ++ H+NI++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSS------NYILDIFQRLNIMIDVASAL 820
I F + LE M G L+ +L + L + L++ D+A
Sbjct: 139 CIGVSLQSL--PRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 821 EYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
+YL IH D+ N LL G VA + DFG+ + + R + +
Sbjct: 195 QYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
+M E EG ++ D ++FGV+L E F+ G P N+ + +
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-------------LEF 298
Query: 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ G + + C V+ + +C PE R N I+ R+
Sbjct: 299 VTSGGRMDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 4e-34
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 30/282 (10%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V + + +VAVK+ + + F E + M + H ++K CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833
++ + EY+ +G L YL S L+ Q L + DV + +L S IH
Sbjct: 75 EY--PIY--IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---ESHQFIH 127
Query: 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNG 893
DL N L+ ++ +SDFG+T+ + +DQ+V+ T + + A E + S+
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 894 DVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVA 952
DV+ FG+++ E F+ GK P + T V ++K+ G L R
Sbjct: 187 DVWAFGILMWEVFSLGKMPY-----DLYTNSE-V-------VLKVSQGHRLYR------- 226
Query: 953 KEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994
++ + C E PEKR +++++ + + + D +
Sbjct: 227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDKH 268
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 6e-34
Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 58/306 (18%)
Query: 714 IGRGGFGSVYKARIQDG------MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIK 766
IG G FG V++AR VAVK+ ++ F E +M + NI+K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSS-----------------------NYI 803
++ C++G + L EYM +G L ++L S
Sbjct: 115 LLGVCAVGK--PMC--LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 804 LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
L ++L I VA+ + YL +H DL N L+G+NMV ++DFG+++ +
Sbjct: 171 LSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTL 922
D + I +M E R +T DV+ +GV+L E F+ G +P + +E +
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV-- 285
Query: 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
I + DG++L+ E C ++N+ C + P R + I
Sbjct: 286 -----------IYYVRDGNILAC-------PENCPLELYNLMRLCWSKLPADRPSFCSIH 327
Query: 983 TRLLKI 988
L ++
Sbjct: 328 RILQRM 333
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 6e-34
Identities = 61/299 (20%), Positives = 117/299 (39%), Gaps = 49/299 (16%)
Query: 714 IGRGGFGSVYKARIQD------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNII 765
+GRG FG V +A VAVK+ + ++ E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSS---------------NYILDIFQRL 810
++ C+ + + +E+ G+L YL S L + +
Sbjct: 95 NLLGACTKPGGPLM---VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 811 NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870
VA +E+L S IH DL N+LL + V + DFG+ + + ++ +V +
Sbjct: 152 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDW 929
+ +MA E + + DV++FGV+L E F+ G P G+ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-----PGVKIDEEF--- 260
Query: 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
++ +G+ + + ++ ++C P +R E+V L +
Sbjct: 261 ----CRRLKEGTRMRA-------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 6e-34
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 32/280 (11%)
Query: 712 NLIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+ +G G +G VY+ + + VAVK + + F E VMK I+H N+++++
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYST 829
C+ + + E+M +G+L YL N + L + ++SA+EYL
Sbjct: 285 CTREP--PFY--IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KK 337
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
IH +L N L+G+N + ++DFG+++L+T D + I + A E + +
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKF 396
Query: 890 STNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDI 948
S DV+ FGV+L E T G P G+ L + + R
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSP-----YPGIDLSQVYE--------LLEKDYRMER--- 440
Query: 949 QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
E C V+ + C +P R + EI +
Sbjct: 441 ----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 8e-34
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 30/280 (10%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
+G G FG V + + +VA+K+ + + F E +VM ++ H ++++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833
+ +F + EYM +G L YL + Q L + DV A+EYL S +H
Sbjct: 91 Q--RPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLH 143
Query: 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNG 893
DL N L+ D V +SDFG+++ + +D++ + + + + E + S+
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 894 DVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVA 952
D++ FGV++ E ++ GK P E T I G L R
Sbjct: 203 DIWAFGVLMWEIYSLGKMPY-----ERFTNSE-T-------AEHIAQGLRLYR------- 242
Query: 953 KEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992
V+ + C E ++R K +++ +L + D +
Sbjct: 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 8e-34
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 53/301 (17%)
Query: 714 IGRGGFGSVYKARIQD--------GMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRN 763
+G G FG V A + VAVK+ + E E+MK I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSS---------------NYILDIFQ 808
II ++ C+ L+ + +EY G+L +YL + +
Sbjct: 149 IINLLGACTQDG--PLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
++ +A +EYL S IH DL NVL+ +N V ++DFG+ + + D +
Sbjct: 205 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVN 927
T + +MA E + + DV++FGV++ E FT G P G+
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-----PGIP-----V 311
Query: 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+ L + +G + + C + ++ M +C P +R K++V L +
Sbjct: 312 EELF---KLLKEGHRMDK-------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
Query: 988 I 988
I
Sbjct: 362 I 362
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 9e-34
Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G+G FG V+ VA+K + ++F E +VMK +RH ++++ +
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTP 830
S + ++ + EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 249 SE---EPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVS 890
+H DL+ +N+L+G+N+V ++DFG+ +L+ ++++ + I + A E GR +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 891 TNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949
DV++FG++L E T G+ P GM + E +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP-----YPGMVNR----------------------EVLD 392
Query: 950 FVAK-------EQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
V + +C + ++ +C + PE+R + + L
Sbjct: 393 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 1e-33
Identities = 70/465 (15%), Positives = 143/465 (30%), Gaps = 76/465 (16%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
+ + T L++L SL H++ + + I + L L N ++ +
Sbjct: 23 EVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMT-GIEKLTGLTKLICTSNNIT-TL 79
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
+ +NL L N + ++ T L L N ++ L
Sbjct: 80 DLSQNTNL---TYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT---KLDVSQNPLLT 130
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237
L + N L I ++ + L L LNK +
Sbjct: 131 YLNCARNTL-------------TEI---------------DVSHNTQLTELDCHLNKKIT 162
Query: 238 VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASK 297
+ + + + + N ++ + + L L N+ + + + +
Sbjct: 163 KLD--VTPQTQLTTLDCSFNKIT----ELDVSQNKLLNRLNCDTNNIT-KLD--LNQNIQ 213
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357
L+ L+ N + L L + N LT L +S L +
Sbjct: 214 LTFLDCSSNKLTEI---DVTPLTQLTYFDCSVNPLTEL--------DVSTLSKLTTLHCI 262
Query: 358 SNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI 417
+ I +L+H+ ++ ++ + T L + +
Sbjct: 263 QTDLLEI-------DLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT---EL 312
Query: 418 TLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLS 477
L + KL LY + +L + V K+ L N + + G + +L N
Sbjct: 313 DLSQNPKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHIQ-DFSS-VGKIPALNNNF 367
Query: 478 LASNELISVIPSTFWNLKDILYLNLSSNSLTG-PLPLEIGNLKVL 521
A + I++ T N + ++ G P+ +E G+ V
Sbjct: 368 EAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVY 412
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-31
Identities = 71/464 (15%), Positives = 140/464 (30%), Gaps = 85/464 (18%)
Query: 128 FESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187
F S + + L L + I LT L +L + N +
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD--MTGIEKLTGLTKLICTSNNIT 77
Query: 188 GAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMS 247
+ + NL LA NKL + ++ ++
Sbjct: 78 --------------------------TLD--LSQNTNLTYLACDSNKLTNL---DVTPLT 106
Query: 248 TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNS 307
+ + N L+ + + P L L N + I + + ++L+ L+ N
Sbjct: 107 KLTYLNCDTNKLT----KLDVSQNPLLTYLNCARNTLT-EID--VSHNTQLTELDCHLNK 159
Query: 308 FSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSR 367
+ L L + N +T L +S K L ++ +N+I +
Sbjct: 160 KITKLD--VTPQTQLTTLDCSFNKITEL--------DVSQNKLLNRLNCDTNNITKL--- 206
Query: 368 KSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQV 427
+ L D S ++ I + LT L F N L + + L KL
Sbjct: 207 -DLNQNI-QLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNPLT---ELDVSTLSKLTT 258
Query: 428 LYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVI 487
L+ L I + ++ + + L L + + +
Sbjct: 259 LHCIQTDLL-EID--LTHNTQLIYFQAEGCRKIKELD--VTHNTQLYLLDCQAAGITEL- 312
Query: 488 PSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQF 547
++YL L++ LT L++ + L + + +++G I L
Sbjct: 313 --DLSQNPKLVYLYLNNTELTE---LDVSHNTKLKSLSCVNAHIQDF--SSVGKIPALNN 365
Query: 548 LFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS 591
F +++ L+NN+L+ ++ L
Sbjct: 366 NFEAEG-----------QTITMPKETLTNNSLTIAVSPDLLDQF 398
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 9e-29
Identities = 54/337 (16%), Positives = 106/337 (31%), Gaps = 40/337 (11%)
Query: 268 YVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGL 327
+ N + + L+ L+ +S + + L L +L
Sbjct: 14 WFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDM--TGIEKLTGLTKLIC 71
Query: 328 NNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNV 387
+N++T+L LS L ++ SN + + V L+ L + +
Sbjct: 72 TSNNITTL--------DLSQNTNLTYLACDSNKLTNL----DVTPLT-KLTYLNCDTNKL 118
Query: 388 SGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLA 447
+ + + L N L I + +L L NK + V
Sbjct: 119 T-KLD--VSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKLD--VTPQT 170
Query: 448 KVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507
++ LD S NK++ + L L+ +N + + + +L+ SSN L
Sbjct: 171 QLTTLDCSFNKIT-ELD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKL 224
Query: 508 TGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM 567
T +++ L L D S+N + + + + L L L I +
Sbjct: 225 TE---IDVTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTDLL-EIDLTH--NT 275
Query: 568 SLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
L + V+ + L L+ +
Sbjct: 276 QLIYFQAEGCRKIKELDVT--HNTQLYLLDCQAAGIT 310
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 1e-17
Identities = 52/364 (14%), Positives = 107/364 (29%), Gaps = 58/364 (15%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
T L+ + + + L +L N+ + + S L L+ N ++
Sbjct: 151 TELDCHLNKKITKLD--VTPQTQLTTLDCSFNKIT-ELDVS--QNKLLNRLNCDTNNIT- 204
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
++ N L L+ S N I ++ T L S N + + L+K
Sbjct: 205 KLDLNQNIQL---TFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE-LD--VSTLSK 255
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
L L+ L + + + F + ++ + L +L +
Sbjct: 256 LTTLHCIQTDLLE------IDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGI 309
Query: 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295
+ + P L LYL + + + +
Sbjct: 310 ----------------------------TELDLSQNPKLVYLYLNNTELT-ELD--VSHN 338
Query: 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFID 355
+KL L F S+ G + L ++ E +SL+ + +D
Sbjct: 339 TKLKSLSCVNAHIQDF--SSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLD 396
Query: 356 LSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI 415
N ++ V + + + ++ N+S P T+ G +G
Sbjct: 397 QFGNPMNIEPGDGGVYDQATN----TITWENLSTDNPAVTYTFTSENGAIVGTVTTPFEA 452
Query: 416 PITL 419
P +
Sbjct: 453 PQPI 456
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 2e-33
Identities = 63/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G G FG V+ A +VAVK + ++F E VMK+++H ++K+ +
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTP 830
+ + ++ + E+M GSL +L S + + ++ +A + ++
Sbjct: 253 T---KEPIY--IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRN 304
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVS 890
IH DL+ +N+L+ ++V ++DFG+ +++ ++++ + I + A E + G +
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 891 TNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949
DV++FG++LME T G+ P GM+ E I+
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIP-----YPGMSN----------------------PEVIR 396
Query: 950 FVAK-------EQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ + E C ++N+ M C PE+R + I + L
Sbjct: 397 ALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-33
Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 22/231 (9%)
Query: 688 PQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGME-----VAVKVFNQQC 742
P +A R E + ++G G FG+VYK E VA+K +
Sbjct: 4 PNQALLRILKETEF-------KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 56
Query: 743 G-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN 801
+A K E VM S+ + ++ +++ C + L + MP G L Y+
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHK 111
Query: 802 YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861
+ LN + +A + YL ++H DL NVL+ ++DFG+ KLL
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
E++ I +MALE + DV+++GV + E T G KP
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-33
Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G+G FG V+ VA+K + ++F E +VMK +RH ++++ +
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTP 830
S + ++ + EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 332 SE---EPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 383
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVS 890
+H DL+ +N+L+G+N+V ++DFG+ +L+ ++++ + I + A E GR +
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 891 TNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949
DV++FG++L E T G+ P GM + E +
Sbjct: 443 IKSDVWSFGILLTELTTKGRVP-----YPGMVNR----------------------EVLD 475
Query: 950 FVAK-------EQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
V + +C + ++ +C + PE+R + + L
Sbjct: 476 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-33
Identities = 74/279 (26%), Positives = 117/279 (41%), Gaps = 36/279 (12%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
IG+G FG V + G +VAVK ++F E VM +RH N+++++
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTP 830
+ EYM GSL YL S +L L +DV A+EYL
Sbjct: 84 VEEKGGLY---IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNN 137
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVS 890
+H DL NVL+ ++ VA +SDFG LT+ + TQ + + A E E + S
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFG----LTK-EASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 891 TNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949
T DV++FG++L E ++ G+ P + LK V ++ G +
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVPY-----PRIPLKDVVP--------RVEKGYKMDA---- 235
Query: 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ C V+ + C R + ++ +L I
Sbjct: 236 ---PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 3e-33
Identities = 70/278 (25%), Positives = 117/278 (42%), Gaps = 32/278 (11%)
Query: 714 IGRGGFGSVYKARIQDG-MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
+G G +G VY+ + + VAVK + + F E VMK I+H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 773 IGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ + E+M +G+L YL N + L + ++SA+EYL
Sbjct: 80 RE--PPFY--IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVST 891
IH DL N L+G+N + ++DFG+++L+T D + I + A E + + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 892 NGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQF 950
DV+ FGV+L E T G P G+ L + + R
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------LLEKDYRMER----- 233
Query: 951 VAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
E C V+ + C +P R + EI +
Sbjct: 234 --PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 5e-33
Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 50/295 (16%)
Query: 714 IGRGGFGSVYKARIQDG------MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIK 766
+G FG VYK + VA+K + G + F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYL---------------YSSNYILDIFQRLN 811
++ + L + Y HG L ++L + L+ ++
Sbjct: 77 LLGVVTKDQ--PLS--MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
++ +A+ +EYL S V+H DL NVL+ D + +SD G+ + + D +
Sbjct: 133 LVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930
+ I +MA E G+ S + D++++GV+L E F+ G +P N+ +
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV---------- 239
Query: 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+ I + +L + C ++V+ + +EC E P +R K+I +RL
Sbjct: 240 ---VEMIRNRQVLPC-------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 5e-33
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 53/301 (17%)
Query: 714 IGRGGFGSVYKARIQD--------GMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRN 763
+G G FG V A + VAVK+ + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSS---------------NYILDIFQ 808
II ++ C+ L+ + +EY G+L +YL + +
Sbjct: 103 IINLLGACTQDG--PLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
++ +A +EYL S IH DL NVL+ +N V ++DFG+ + + D +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVN 927
T + +MA E + + DV++FGV++ E FT G P G+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-----PGIP-----V 265
Query: 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+ L + +G + + C + ++ M +C P +R K++V L +
Sbjct: 266 EELFKLLK---EGHRMDK-------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 988 I 988
I
Sbjct: 316 I 316
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 9e-33
Identities = 75/277 (27%), Positives = 120/277 (43%), Gaps = 36/277 (12%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
IG+G FG V + G +VAVK ++F E VM +RH N+++++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIV- 256
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVI 832
+ L+ + EYM GSL YL S +L L +DV A+EYL +
Sbjct: 257 EEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFV 311
Query: 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTN 892
H DL NVL+ ++ VA +SDFG LT+ + TQ + + A E E + ST
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFG----LTK-EASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 893 GDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFV 951
DV++FG++L E ++ G+ P + LK V ++ G +
Sbjct: 367 SDVWSFGILLWEIYSFGRVP-----YPRIPLKDVVP--------RVEKGYKMDA------ 407
Query: 952 AKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ C V+++ C R ++ +L I
Sbjct: 408 -PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 9e-33
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 36/283 (12%)
Query: 714 IGRGGFGSVYKARIQDG----MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKII 768
IG G G V R++ + VA+K R + F E +M H NII++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL-YFGY 827
+ G + + EYM +GSL+ +L + + I Q + ++ V + + YL GY
Sbjct: 117 GVVTRG--RLAM--IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT-REDQFVTQTQTPATIGYMALEYGSE 886
+H DL NVL+ N+V +SDFG++++L D T T I + A E +
Sbjct: 173 ----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF 228
Query: 887 GRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945
S+ DV++FGV++ E G++P MT + V I + +G L
Sbjct: 229 RTFSSASDVWSFGVVMWEVLAYGERPY-----WNMTNRD-V-------ISSVEEGYRLPA 275
Query: 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
C + + ++C + +R +IV+ L +
Sbjct: 276 -------PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 1e-32
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 714 IGRGGFGSVYKARIQ----DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKII 768
+G G FG V R++ + VA+K + + F E +M H NII++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL-YFGY 827
+ K + + EYM +GSL+ +L + + Q + ++ +AS ++YL GY
Sbjct: 113 GVVTKS--KPVM--IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT-REDQFVTQTQTPATIGYMALEYGSE 886
+H DL N+L+ N+V +SDFG+ ++L + T I + + E +
Sbjct: 169 ----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 887 GRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945
+ ++ DV+++G++L E + G++P M+ + V I + +G L
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPY-----WEMSNQD-V-------IKAVDEGYRLPP 271
Query: 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
C + ++ + ++C + R ++IV+ L K+
Sbjct: 272 -------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-32
Identities = 66/301 (21%), Positives = 112/301 (37%), Gaps = 52/301 (17%)
Query: 714 IGRGGFGSVYKARI------QDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNII 765
+G G FG V +A M VAVK+ ++ E +V+ + H NI+
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYL-----------------YSSNYILDIFQ 808
++ C+IG + EY +G L +L LD+
Sbjct: 91 NLLGACTIGG--PTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
L+ VA + +L S IH DL N+LL + + DFG+ + + + +V
Sbjct: 147 LLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVN 927
+ + +MA E + DV+++G+ L E F+ G P GM +
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY-----PGMPVDSKF- 257
Query: 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
I +G + E + ++++ C P KR K+IV + K
Sbjct: 258 ------YKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
Query: 988 I 988
Sbjct: 305 Q 305
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-32
Identities = 71/292 (24%), Positives = 104/292 (35%), Gaps = 44/292 (15%)
Query: 714 IGRGGFGSVYKAR----IQDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIK 766
+G G FG V + + VAVK A F E M S+ HRN+I+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ K + E P GSL L + + VA + YL
Sbjct: 86 LYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL--- 137
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ---TPATIGYMALEY 883
S IH DL N+LL + + DFG+ + L + D + P + A E
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--FAWCAPES 195
Query: 884 GSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD--G 940
S D + FGV L E FT G++P G+ I+ +D G
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPW-----IGLNGSQ---------ILHKIDKEG 241
Query: 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992
L R + C ++N+ ++C PE R + LL+ D
Sbjct: 242 ERLPRPED-------CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-32
Identities = 61/310 (19%), Positives = 116/310 (37%), Gaps = 58/310 (18%)
Query: 712 NLIGRGGFGSVYKARIQD------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRN 763
+G G FG V +A ++VAVK+ ++ E ++M + +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYL-------------YSSNYILDIFQRL 810
I+ ++ C+ G + + EY +G L +L +N L
Sbjct: 112 IVNLLGACTHGG--PVL--VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 811 NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870
+ VA + +L S IH D+ NVLL + VA + DFG+ + + + ++ +
Sbjct: 168 HFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP-----TNEIFNEGMTLKH 924
+ +MA E + + DV+++G++L E F+ G P N F
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF-------- 276
Query: 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984
+ DG +++ ++++ C P R ++I +
Sbjct: 277 ---------YKLVKDGYQMAQ-------PAFAPKNIYSIMQACWALEPTHRPTFQQICSF 320
Query: 985 LLKINDLDFN 994
L + D
Sbjct: 321 LQEQAQEDRR 330
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 1e-32
Identities = 65/291 (22%), Positives = 112/291 (38%), Gaps = 55/291 (18%)
Query: 714 IGRGGFGSVYKARIQDG----MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKII 768
IG G FG V++ + VA+K + F E M+ H +I+K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 769 SCCS------IGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
+ I +E G L +L Y LD+ + +++AL Y
Sbjct: 83 GVITENPVWII-----------MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131
Query: 823 L----YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY 878
L + +H D+ NVL+ N L DFG+++ + + + ++ I +
Sbjct: 132 LESKRF-------VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 183
Query: 879 MALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937
MA E + R ++ DV+ FGV + E G KP +G+ V I +I
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNND-V-------IGRI 230
Query: 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+G L C ++++ +C P +R E+ +L I
Sbjct: 231 ENGERLPM-------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-32
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 58/290 (20%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS- 772
+G G FG V+ +VAVK Q + +F E +MK ++H+ ++++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 773 -----IGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFG 826
I EYM +GSL +L + + L I + L++ +A + ++
Sbjct: 80 EPIYII-----------TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
IH DL+ +N+L+ D + ++DFG+ +L+ ++++ + I + A E +
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINY 184
Query: 887 GRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945
G + DV++FG++L E T G+ P GMT
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPY-----PGMTN----------------------P 217
Query: 946 EDIQFVAK-------EQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
E IQ + + + C ++ + C E PE R + + L
Sbjct: 218 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 3e-32
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 714 IGRGGFGSVYKARIQDG-----MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKI 767
IG G FG VYK ++ + VA+K + F E +M H NII++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL-YFG 826
S + + EYM +G+L+K+L + + Q + ++ +A+ ++YL
Sbjct: 112 EGVISKYK--PMM--IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT-REDQFVTQTQTPATIGYMALEYGS 885
Y +H DL N+L+ N+V +SDFG++++L + T + I + A E S
Sbjct: 168 Y----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 886 EGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944
+ ++ DV++FG+++ E T G++P ++ V + I DG L
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPY-----WELSNHE-V-------MKAINDGFRLP 270
Query: 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
C S ++ + M+C + +R +IV+ L K+
Sbjct: 271 T-------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 4e-32
Identities = 76/312 (24%), Positives = 125/312 (40%), Gaps = 53/312 (16%)
Query: 714 IGRGGFGSVYKARIQD--------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRN 763
+G G FG V A +VAVK+ + E E+MK I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSS---------------NYILDIFQ 808
II ++ C+ L+ + +EY G+L +YL + L
Sbjct: 137 IINLLGACTQDG--PLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
++ VA +EYL S IH DL NVL+ ++ V ++DFG+ + + D +
Sbjct: 193 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVN 927
T + +MA E + + DV++FGV+L E FT G P G+
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY-----PGVP-----V 299
Query: 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+ L + +G + + C + ++ M +C P +R K++V L +
Sbjct: 300 EELFKLLK---EGHRMDK-------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349
Query: 988 INDLDFNGYPSY 999
I L N Y
Sbjct: 350 IVALTSNQEMGY 361
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 4e-32
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 42/282 (14%)
Query: 714 IGRGGFGSVYKARIQDG---MEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIKIIS 769
+G G FGSV + + ++VA+KV Q +A E ++M + + I+++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL----YF 825
C +AL L +E G L K+L + + ++ V+ ++YL +
Sbjct: 78 VCQA---EALM--LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF- 131
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQTQTPATIGYMALEYG 884
+H DL NVLL + A +SDFG++K L + + ++ + + A E
Sbjct: 132 ------VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 885 SEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
+ + S+ DV+++GV + E + G+KP + M V + I G +
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALSYGQKPY-----KKMKGPE-V-------MAFIEQGKRM 232
Query: 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+C ++ + +C + E R + + R+
Sbjct: 233 EC-------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 7e-32
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 39/284 (13%)
Query: 711 NNLIGRGGFGSVYKAR-IQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIKI 767
+ IGRG F +VYK + +EVA + + F E E++K ++H NI++
Sbjct: 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 90
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
L E M G+L+ YL ++ I + + L++L+
Sbjct: 91 YDSWESTVKGKKCIVLVTELMTSGTLKTYL-KRFKVMKIKVLRSWCRQILKGLQFLH-TR 148
Query: 828 STPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YMALEY 883
+ P+IH DLK N+ + G + D G+ L + A IG +MA E
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK-------RASFAKAVIGTPEFMAPEM 201
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
E + DVY FG+ ++E T + P +E N I + V S +
Sbjct: 202 YEEK-YDESVDVYAFGMCMLEMATSEYPYSECQN-------------AAQIYRRV-TSGV 246
Query: 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
VA + + C ++ ++R + K+ LL
Sbjct: 247 KPASFDKVAIPEVKEII----EGCIRQNKDERYSIKD----LLN 282
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 8e-32
Identities = 64/287 (22%), Positives = 113/287 (39%), Gaps = 46/287 (16%)
Query: 714 IGRGGFGSVYKARIQDG---MEVAVKV-----FNQQCGRAFKSFDVECEVMKSIRHRNII 765
+G G FG+V K Q VAVK+ + + E VM+ + + I+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA---EANVMQQLDNPYIV 81
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
++I C ++ L +E G L KYL + + + + ++ V+ ++YL
Sbjct: 82 RMIGICEA---ESWM--LVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE- 134
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT---PATIGYMALE 882
+ +H DL NVLL A +SDFG++K L ++ + P + + A E
Sbjct: 135 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAPE 190
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941
+ + S+ DV++FGV++ E F+ G+KP GM + G
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPY-----RGMKGSE--------VTAMLEKGE 237
Query: 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ C ++++ C E R + RL
Sbjct: 238 RMGC-------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 1e-31
Identities = 60/306 (19%), Positives = 111/306 (36%), Gaps = 57/306 (18%)
Query: 714 IGRGGFGSVYKARIQDG------MEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNII 765
+G G FG V A ++VAVK+ ++ ++ E ++M + H NI+
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYL----------------------YSSNYI 803
++ C++ ++ L EY +G L YL +
Sbjct: 113 NLLGACTLSG--PIY--LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 804 LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
L L VA +E+L +H DL NVL+ V + DFG+ + + +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTL 922
+V + + +MA E EG + DV+++G++L E F+ G P G+ +
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY-----PGIPV 280
Query: 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
I +G + + ++ + C KR + +
Sbjct: 281 DANF-------YKLIQNGFKMDQ-------PFYATEEIYIIMQSCWAFDSRKRPSFPNLT 326
Query: 983 TRLLKI 988
+ L
Sbjct: 327 SFLGCQ 332
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 1e-31
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 53/299 (17%)
Query: 712 NLIGRGGFGSVYKARIQDG---MEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNIIK 766
++IG G FG V KARI+ M+ A+K + + F E EV+ + H NII
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYL---------------YSSNYILDIFQRLN 811
++ C L+ LA+EY PHG+L +L S+ L Q L+
Sbjct: 91 LLGACEHR--GYLY--LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQT 870
DVA ++YL IH DL N+L+G+N VA ++DFG L+R ++ +V +T
Sbjct: 147 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG----LSRGQEVYVKKT 199
Query: 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDW 929
+ +MA+E + +TN DV+++GV+L E + G P + +
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--------- 250
Query: 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
K+ G L + C V+++ +C E P +R + +I+ L ++
Sbjct: 251 ----YEKLPQGYRLEK-------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-31
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 37/282 (13%)
Query: 714 IGRGGFGSVYKARIQDG----MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKII 768
+G G FG VY+ + + VAVK + C + F E +MK++ H +I+K+I
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
+ +E P+G L YL + L + + + + A+ YL S
Sbjct: 80 GIIEEEPTW-----IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ES 131
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ-TQTPATIGYMALEYGSEG 887
+H D+ N+L+ L DFG+++ + ED + T+ P I +M+ E +
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFR 189
Query: 888 RVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946
R +T DV+ F V + E + GK+P + K V I + G L +
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPF-----FWLENKD-V-------IGVLEKGDRLPK- 235
Query: 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ C ++ + C P R E+V L +
Sbjct: 236 ------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 3e-31
Identities = 64/281 (22%), Positives = 113/281 (40%), Gaps = 35/281 (12%)
Query: 714 IGRGGFGSVYKARIQDG----MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKII 768
IG G FG V++ M VA+K + F E M+ H +I+K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
+ ++ + +E G L +L + LD+ + +++AL YL S
Sbjct: 458 GVITE---NPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL---ES 509
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR 888
+H D+ NVL+ N L DFG+++ + + + ++ I +MA E + R
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 889 VSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947
++ DV+ FGV + E G KP + N + I +I +G L
Sbjct: 569 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-------------IGRIENGERLPM-- 613
Query: 948 IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
C ++++ +C P +R E+ +L I
Sbjct: 614 -----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 4e-31
Identities = 63/291 (21%), Positives = 120/291 (41%), Gaps = 60/291 (20%)
Query: 714 IGRGGFGSVYKARIQDG---MEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIKIIS 769
+G G FGSV + + ++VA+KV Q +A E ++M + + I+++I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL----YF 825
C +AL L +E G L K+L + + ++ V+ ++YL +
Sbjct: 404 VCQ---AEALM--LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF- 457
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT---PATIGYMALE 882
+H +L NVLL + A +SDFG++K L +D + T P + + A E
Sbjct: 458 ------VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP--LKWYAPE 509
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941
+ + S+ DV+++GV + E + G+KP + M
Sbjct: 510 CINFRKFSSRSDVWSYGVTMWEALSYGQKPY-----KKMK-------------------- 544
Query: 942 LLSREDIQFVAK-------EQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
E + F+ + +C ++ + +C + E R + + R+
Sbjct: 545 --GPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 6e-31
Identities = 60/304 (19%), Positives = 115/304 (37%), Gaps = 53/304 (17%)
Query: 714 IGRGGFGSVYKARIQD--------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNII 765
+G+G F ++K ++ EV +KV ++ +SF +M + H++++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
C GD L E++ GSL+ YL + ++I +L + +A+A+ +L
Sbjct: 76 LNYGVCVCGD--ENI--LVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL-- 129
Query: 826 GYSTPVIHCDLKPSNVLL--------GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
+IH ++ N+LL G+ LSD GI+ + +D Q I
Sbjct: 130 -EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD----ILQER--IP 182
Query: 878 YMALEYGSEGRV-STNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIM 935
++ E + + D ++FG L E + G KP + + +
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL-----SALDSQR-K-------LQ 229
Query: 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995
D L + + N+ C P+ R + + I+ L + D
Sbjct: 230 FYEDRHQLPAP---------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
Query: 996 YPSY 999
S+
Sbjct: 281 RGSH 284
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 128 bits (322), Expect = 7e-31
Identities = 59/355 (16%), Positives = 111/355 (31%), Gaps = 96/355 (27%)
Query: 254 LQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIP 313
L NS ++ ++ K + +N +
Sbjct: 13 LSQNSFYNTISGTYADYFSAWDKW------------------EKQALPGENRNEAVSLLK 54
Query: 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373
+ L LN +L+SL L + ++++ N++
Sbjct: 55 ECL--INQFSELQLNRLNLSSLPDNL--------PPQITVLEITQNALI----------- 93
Query: 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDN 433
S+PE +L L N L+ ++P L+ L V +N
Sbjct: 94 ----------------SLPELPASLEYL---DACDNRLS-TLPELPASLKHLDVD---NN 130
Query: 434 KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWN 493
+L +P+ L ++ NN+L+ +P SL LS+ +N+L + +P +
Sbjct: 131 QLT-MLPELPALLEY---INADNNQLT-MLPE---LPTSLEVLSVRNNQL-TFLPELPES 181
Query: 494 LKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYN 553
L+ L++S+N L LP + F N
Sbjct: 182 LEA---LDVSTNLLES-LPAVPVRNHHSEET--------------------EIFFRCREN 217
Query: 554 ILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608
+ IP++ L ++ L +N LS I SL + + D +
Sbjct: 218 RIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDG 271
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-25
Identities = 61/353 (17%), Positives = 105/353 (29%), Gaps = 83/353 (23%)
Query: 92 SIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNC-- 149
SI I N +L SF N +S + S +E L S L C
Sbjct: 2 SIMLPINNNFSLSQNSF-YNTIS-GTYADYFSAWDKWEKQALPGEN-RNEAVSLLKECLI 58
Query: 150 TYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHN 209
L+L+ + + +P + ++ L ++ N L
Sbjct: 59 NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI---------------------- 93
Query: 210 FSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYV 269
+P +L L+ L+ L P ++ + + NN L+ +P +
Sbjct: 94 ----SLPELPASLEYLDACDNRLSTL----PELPASLKHLD---VDNNQLT----MLPEL 138
Query: 270 RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNN 329
LE + N + +P + L L ++ N + F+P +L+ L ++
Sbjct: 139 -PALLEYINADNNQLT-MLPELP---TSLEVLSVRNNQLT-FLPEL---PESLEALDVST 189
Query: 330 NHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSG 389
N L SL + F N I
Sbjct: 190 NLLESLPAVPVRNHHSE--ETEIFFRCRENRIT--------------------------- 220
Query: 390 SIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDE 442
IPE I +L L N L+ I +L + + P S +
Sbjct: 221 HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQ 273
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 90.4 bits (224), Expect = 9e-19
Identities = 53/314 (16%), Positives = 97/314 (30%), Gaps = 70/314 (22%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKL---------- 105
+ L ++ L+LS ++P L + L + N S+P ++ L
Sbjct: 62 SELQLNRLNLS-SLPDNLP--PQITVLEITQNALI-SLPELPASLEYLDACDNRLSTLPE 117
Query: 106 -------LSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLS 158
L +NQL+ +P L E +N N +P ++ L +L +
Sbjct: 118 LPASLKHLDVDNNQLT-MLPELPA-LL---EYINADNNQLT-MLPELPTS---LEVLSVR 168
Query: 159 YNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE 218
N +P+ + LE L +S N L+ +P
Sbjct: 169 NNQL-TFLPELPES---LEALDVSTNLLE--------------------------SLPAV 198
Query: 219 IGNLRNLEVLALGL----NKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNL 274
+ E + N++ IP I ++ + L++N LS S L
Sbjct: 199 PVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLS----SRIRESLSQQ 253
Query: 275 EELYLW-GNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
+ G S+ + N + F S + + + N +
Sbjct: 254 TAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFS 313
Query: 334 SLTLELSFLSSLSN 347
+ LS S N
Sbjct: 314 AFLDRLSDTVSARN 327
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 83.5 bits (206), Expect = 1e-16
Identities = 48/294 (16%), Positives = 89/294 (30%), Gaps = 52/294 (17%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
L+ LS T+P +L + L + +NQ + +P L+ ++ +NQL+
Sbjct: 103 EYLDACDNRLS-TLPELPASL---KHLDVDNNQLT-MLPELPAL---LEYINADNNQLT- 153
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
+P ++L E L++ N +P + L L +S N +P
Sbjct: 154 MLPELP-TSL---EVLSVRNNQL-TFLPELPES---LEALDVSTNLLE-SLPAVPVRNHH 204
Query: 176 LEE----LYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALG 231
EE N + IP I +L + L
Sbjct: 205 SEETEIFFRCRENRIT--------------------------HIPENILSLDPTCTIILE 238
Query: 232 LNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNF 291
N L I + + S S + P + + W F + +
Sbjct: 239 DNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAW---FPENKQSD 295
Query: 292 IFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL 345
+ E N+FS + + + + + +LS + L
Sbjct: 296 VSQIWHAFEHEEHANTFS-AFLDRLSDTVSARNTSGFREQVAAWLEKLSASAEL 348
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 56.9 bits (137), Expect = 3e-08
Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 15/116 (12%)
Query: 498 LYLNLSSNSLTGPLPLEI----GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYN 553
L N N+++G + + + N ++ + I L L
Sbjct: 13 LSQNSFYNTISG-TYADYFSAWDKWEKQALPGENRNEAVSLLKECL--INQFSELQLNRL 69
Query: 554 ILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609
L S+PD+ + L ++ N L S+P L Y L+ N+L +P+
Sbjct: 70 NLS-SLPDNLPP--QITVLEITQNALI-SLPELPASLEY---LDACDNRLS-TLPE 117
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 124 bits (312), Expect = 3e-30
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 17/263 (6%)
Query: 272 PNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNH 331
++ + +P+ I + L L +N ++F +LR+L+ L L+ NH
Sbjct: 43 NQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNH 99
Query: 332 LTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSI 391
+ ++ + + L+N L ++L N + I + L LK + + + SI
Sbjct: 100 IRTIEIGA--FNGLAN---LNTLELFDNRLTTI-PNGAFVYL-SKLKELWLRNNPIE-SI 151
Query: 392 PEEI-GNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKV 449
P + +L LG I L L+ L L IP+ + L K+
Sbjct: 152 PSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKL 209
Query: 450 YQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG 509
+LDLS N LS P F L L+ L + +++ + + F NL+ ++ +NL+ N+LT
Sbjct: 210 DELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269
Query: 510 PLPLEI-GNLKVLVKIDFSMNNF 531
LP ++ L L +I N +
Sbjct: 270 -LPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-28
Identities = 71/291 (24%), Positives = 111/291 (38%), Gaps = 46/291 (15%)
Query: 77 SSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136
+ + +P I +LL+ +NQ+ I N +L E L LS+N
Sbjct: 43 NQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRN 98
Query: 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGFL 195
A + L L L N IP L+KL+EL+L N ++
Sbjct: 99 HIRTIEIGAFNGLANLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRNNPIE-------- 149
Query: 196 QIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVG 253
IP+ + +L L LG K + I F +S ++ +
Sbjct: 150 ------------------SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN 191
Query: 254 LQNNSLSGSLQSIPY-VRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGF 311
L +L IP L L+EL L GNH S +I F L +L + ++
Sbjct: 192 LAMCNLR----EIPNLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQVI 246
Query: 312 IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362
+ F NL++L + L +N+LT L +L + L + LE I L N +
Sbjct: 247 ERNAFDNLQSLVEINLAHNNLTLLPHDL--FTPLHH---LERIHLHHNPWN 292
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 9e-27
Identities = 64/234 (27%), Positives = 115/234 (49%), Gaps = 9/234 (3%)
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431
+S + ++ ++ + + +L +L L N++ L L L
Sbjct: 61 GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120
Query: 432 DNKLEGSIPDEVCR-LAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPS 489
DN+L +IP+ L+K+ +L L NN + SIP+ F + SLR L L + +S I
Sbjct: 121 DNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISE 178
Query: 490 -TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFL 548
F L ++ YLNL+ +L +P + L L ++D S N+ S + P + G+ LQ L
Sbjct: 179 GAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236
Query: 549 FLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVS-LEKLSYLKDLNLSFN 601
++ + +Q ++F +L SL +NL++NNL+ +P L +L+ ++L N
Sbjct: 237 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-25
Identities = 56/254 (22%), Positives = 98/254 (38%), Gaps = 18/254 (7%)
Query: 384 DCNVSG--SIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIP 440
C +P+ I N L L N + + L+ L++L N + +I
Sbjct: 49 ICVRKNLREVPDGISTNTRLL---NLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIE 104
Query: 441 DEV-CRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498
LA + L+L +N+L+ +IP F L+ L+ L L +N + S+ F + +
Sbjct: 105 IGAFNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 163
Query: 499 YLNLSS-NSLTGPLPLEI-GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ 556
L+L L+ + L L ++ +M N + + + L L L N L
Sbjct: 164 RLDLGELKRLSY-ISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLS 220
Query: 557 GSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG--GSFG 614
P SF LM L+ L + + + + + L L ++NL+ N L +P
Sbjct: 221 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLH 279
Query: 615 NFSAESFEGNKLLC 628
+ N C
Sbjct: 280 HLERIHLHHNPWNC 293
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 8e-23
Identities = 60/304 (19%), Positives = 92/304 (30%), Gaps = 69/304 (22%)
Query: 41 CNWTGVTCDVHSHRVTAL------NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQF 89
C+ + + N L+L I +L L+ L L N
Sbjct: 41 CSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHI 100
Query: 90 SGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSN 148
+I F + L L DN+L+ IP L + L L N A +
Sbjct: 101 R-TIEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR 158
Query: 149 CTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFS 207
LR L L I + L+ L L L+ L+
Sbjct: 159 IPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-------------------- 198
Query: 208 HNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIP 267
EIP + L L+ L L N L I F
Sbjct: 199 ------EIP-NLTPLIKLDELDLSGNHLS-AIRPGSFQ---------------------- 228
Query: 268 YVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLG 326
L +L++L++ + I F N L + L N+ + F L +L+R+
Sbjct: 229 --GLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIH 285
Query: 327 LNNN 330
L++N
Sbjct: 286 LHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 3e-14
Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 40/210 (19%)
Query: 59 NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGD-N 111
N++ L L TIP+ LS L+ L+L +N SIP F I +L+ L G+
Sbjct: 113 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELK 171
Query: 112 QLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIG 171
+LS I L LNL+ IP L+ L L LS N + P
Sbjct: 172 RLS-YISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQ 228
Query: 172 NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE-IGNLRNLEVLAL 230
L L++L++ + +Q I NL++L + L
Sbjct: 229 GLMHLQKLWMIQSQIQ--------------------------VIERNAFDNLQSLVEINL 262
Query: 231 GLNKLVGVIPAEIF-NMSTIQGVGLQNNSL 259
N L ++P ++F + ++ + L +N
Sbjct: 263 AHNNLT-LLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 2e-10
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 36/174 (20%)
Query: 442 EVCR-LAKVYQLDLSNNKLSGSIPACFGDL-ASLRNLSLASNELISVIPSTFWNLKDILY 499
VC + ++ L +P + + R L+L N++ + ++F +L+ +
Sbjct: 37 SVCSCSNQFSKVICVRKNLR-EVPD---GISTNTRLLNLHENQIQIIKVNSFKHLRHLEI 92
Query: 500 LNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSI 559
L LS N + I+ A G+ +L L L N L +I
Sbjct: 93 LQLSRNHIR--------------TIE----------IGAFNGLANLNTLELFDNRLT-TI 127
Query: 560 P-DSFGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLS-FNKLEGEIPKG 610
P +F L LK L L NN + SIP ++ L+ L+L +L I +G
Sbjct: 128 PNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLS-YISEG 179
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 5e-06
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 59 NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQ 112
+ L LSG I L LQ L++ +Q I + F N+ +L ++ N
Sbjct: 208 KLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAHNN 266
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMFH 139
L+ +P ++ + L E ++L N ++
Sbjct: 267 LT-LLPHDLFTPLHHLERIHLHHNPWN 292
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-30
Identities = 57/266 (21%), Positives = 106/266 (39%), Gaps = 18/266 (6%)
Query: 273 NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHL 332
+ E+ + S+P I S +RLEL+ N F L L +L L++N L
Sbjct: 8 SGTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGL 64
Query: 333 TSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP 392
+ ++ L+++DLS N + +S +G L+ D N+ +
Sbjct: 65 SFKGCCSQSDFGTTS---LKYLDLSFNGV-ITMSSNFLG--LEQLEHLDFQHSNLK-QMS 117
Query: 393 EE--IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEV-CRLAKV 449
E +L NLI + + + L L+VL N + + ++ L +
Sbjct: 118 EFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 177
Query: 450 YQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT 508
LDLS +L + F L+SL+ L+++ N S+ + L + L+ S N +
Sbjct: 178 TFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236
Query: 509 GPLPLEI--GNLKVLVKIDFSMNNFS 532
+ L ++ + N+F+
Sbjct: 237 T-SKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-29
Identities = 60/289 (20%), Positives = 102/289 (35%), Gaps = 39/289 (13%)
Query: 78 SLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNM 137
S + +S + S+P I + L N+L +P + L L+LS N
Sbjct: 8 SGTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNG 63
Query: 138 --FHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFL 195
F G + T L+ L LS+N + L +LE L + L+ +
Sbjct: 64 LSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVF 122
Query: 196 QIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGL 254
+LRNL L + V IF +S+++ + +
Sbjct: 123 L------------------------SLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKM 157
Query: 255 QNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA-SKLSRLELQKNSFSGFIP 313
NS + + L NL L L + FN+ S L L + N+F
Sbjct: 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDT 216
Query: 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362
+ L +L+ L + NH+ + + S+ L F++L+ N
Sbjct: 217 FPYKCLNSLQVLDYSLNHIMTSKKQE-LQHFPSS---LAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 19/257 (7%)
Query: 384 DCNVSG--SIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLE-GSIP 440
CN G S+P I ++ L N L KL +L L N L
Sbjct: 13 RCNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70
Query: 441 DEVCR-LAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP-STFWNLKDIL 498
+ + LDLS N + ++ + F L L +L + L + S F +L++++
Sbjct: 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 129
Query: 499 YLNLSSNSLTGPLPLEI-GNLKVLVKIDFSMNNF-SGVIPNAIGGIKDLQFLFLEYNILQ 556
YL++S I L L + + N+F +P+ +++L FL L L+
Sbjct: 130 YLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 188
Query: 557 GSIP-DSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGN 615
+ +F L SL+ LN+S+NN + L+ L+ L+ S N + K +
Sbjct: 189 -QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKK-QELQH 245
Query: 616 FSAE----SFEGNKLLC 628
F + + N C
Sbjct: 246 FPSSLAFLNLTQNDFAC 262
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-26
Identities = 63/295 (21%), Positives = 101/295 (34%), Gaps = 59/295 (20%)
Query: 312 IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371
+P+ + RL L +N L SL L + LSSN + S K
Sbjct: 22 VPTGI--PSSATRLELESNKLQSLPH-----GVFDKLTQLTKLSLSSNGL----SFKGCC 70
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431
+ S T+L L N + ++ L++L+ L F
Sbjct: 71 SQSDF--------------------GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQ 109
Query: 432 DNKLEGSIPDEVCR-LAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS- 489
+ L+ V L + LD+S+ + F L+SL L +A N
Sbjct: 110 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD 169
Query: 490 TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLF 549
F L+++ +L+LS L + P A + LQ L
Sbjct: 170 IFTELRNLTFLDLSQCQLEQ------------------------LSPTAFNSLSSLQVLN 205
Query: 550 LEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL-SYLKDLNLSFNKL 603
+ +N + L SL+ L+ S N++ S L+ S L LNL+ N
Sbjct: 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 2e-16
Identities = 37/212 (17%), Positives = 65/212 (30%), Gaps = 39/212 (18%)
Query: 59 NISHLSLSG----TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQL 113
++ +L LS T+ S L L+ L + FS+F ++ L L
Sbjct: 79 SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 138
Query: 114 SGEIPTNICSNLPFFESLNLSKNMFHGGIPS-ALSNCTYLRILRLSYNDFAGGIPKEI-G 171
I + L E L ++ N F + L L LS +
Sbjct: 139 R-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFN 196
Query: 172 NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLAL 230
+L+ L+ L +S N + L +L+VL
Sbjct: 197 SLSSLQVLNMSHNNFF--------------------------SLDTFPYKCLNSLQVLDY 230
Query: 231 GLNKLVGVIPAEIFN--MSTIQGVGLQNNSLS 260
LN ++ + S++ + L N +
Sbjct: 231 SLNHIM-TSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 1e-11
Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 5/132 (3%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQLS 114
L+ISH LSSL+ L + N F + IF + L L QL
Sbjct: 129 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 188
Query: 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI--GN 172
++ ++L + LN+S N F L++L S N K+
Sbjct: 189 -QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQELQHF 246
Query: 173 LTKLEELYLSFN 184
+ L L L+ N
Sbjct: 247 PSSLAFLNLTQN 258
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 5e-30
Identities = 62/288 (21%), Positives = 107/288 (37%), Gaps = 49/288 (17%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
F E LIG GGFG V+KA+ DG +K +A + E + + + H NI+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 767 IISCCSIGDFKALFKALA------------LEYMPHGSLEKYL-YSSNYILDIFQRLNIM 813
C D+ + +E+ G+LE+++ LD L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP 873
+ ++Y++ S +I+ DLKPSN+ L D + DFG+ L + + T
Sbjct: 129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTL 185
Query: 874 ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933
YM+ E S D+Y G++L E E
Sbjct: 186 R---YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK------------FFTD 230
Query: 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + + +++ + ++ +S + PE R N EI
Sbjct: 231 LRDGIISDIFDKKEKTLL--QKLLS-----------KKPEDRPNTSEI 265
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 9e-30
Identities = 57/263 (21%), Positives = 112/263 (42%), Gaps = 17/263 (6%)
Query: 272 PNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNH 331
++ S +P I S L L +N+ TF +L +L+ L L N
Sbjct: 54 NQFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 332 LTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSI 391
+ +E+ + L++ L ++L N + I + LS L+ + + + SI
Sbjct: 111 IR--QIEVGAFNGLAS---LNTLELFDNWLTVI-PSGAFEYLS-KLRELWLRNNPIE-SI 162
Query: 392 PEEI-GNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKV 449
P + +L+ LG I L L+ L ++ +P+ + L +
Sbjct: 163 PSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN-LTPLVGL 220
Query: 450 YQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG 509
+L++S N P F L+SL+ L + ++++ + + F L ++ LNL+ N+L+
Sbjct: 221 EELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280
Query: 510 PLPLEI-GNLKVLVKIDFSMNNF 531
LP ++ L+ LV++ N +
Sbjct: 281 -LPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 9e-29
Identities = 65/291 (22%), Positives = 104/291 (35%), Gaps = 46/291 (15%)
Query: 77 SSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136
+ + S +P I + L+ +N + I + +L E L L +N
Sbjct: 54 NQFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQ-MIQADTFRHLHHLEVLQLGRN 109
Query: 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGFL 195
A + L L L N IP L+KL EL+L N ++
Sbjct: 110 SIRQIEVGAFNGLASLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRNNPIE-------- 160
Query: 196 QIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVG 253
IP+ + +L L LG K + I F + ++ +
Sbjct: 161 ------------------SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLN 202
Query: 254 LQNNSLSGSLQSIPY-VRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGF 311
L ++ +P L LEEL + GNHF I F S L +L + + S
Sbjct: 203 LGMCNIK----DMPNLTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVSLI 257
Query: 312 IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362
+ F L +L L L +N+L+SL +L + L L + L N +
Sbjct: 258 ERNAFDGLASLVELNLAHNNLSSLPHDL--FTPLRY---LVELHLHHNPWN 303
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-27
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 9/234 (3%)
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431
+ + + ++ + N+ + +L +L LG N++ L L L
Sbjct: 72 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131
Query: 432 DNKLEGSIPDEVCR-LAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPS 489
DN L IP L+K+ +L L NN + SIP+ F + SL L L + + I
Sbjct: 132 DNWLT-VIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISE 189
Query: 490 -TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFL 548
F L ++ YLNL ++ +P + L L +++ S N+F + P + G+ L+ L
Sbjct: 190 GAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247
Query: 549 FLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVS-LEKLSYLKDLNLSFN 601
++ + + ++F L SL LNL++NNLS S+P L YL +L+L N
Sbjct: 248 WVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-25
Identities = 63/254 (24%), Positives = 98/254 (38%), Gaps = 18/254 (7%)
Query: 384 DCNVSG--SIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIP 440
C G +P+ I N L L NN+ T L L+VL N + I
Sbjct: 60 VCTRRGLSEVPQGIPSNTRYL---NLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIE 115
Query: 441 DEV-CRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498
LA + L+L +N L+ IP+ F L+ LR L L +N + S+ F + ++
Sbjct: 116 VGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLM 174
Query: 499 YLNLSS-NSLTGPLPLEI-GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ 556
L+L L + L L ++ M N + + + L+ L + N
Sbjct: 175 RLDLGELKKLEY-ISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFP 231
Query: 557 GSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG--GSFG 614
P SF L SLK L + N+ +S + + L+ L +LNL+ N L +P
Sbjct: 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLR 290
Query: 615 NFSAESFEGNKLLC 628
N C
Sbjct: 291 YLVELHLHHNPWNC 304
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-23
Identities = 58/304 (19%), Positives = 91/304 (29%), Gaps = 69/304 (22%)
Query: 41 CNWTGVTCDVHSHRVTAL------NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQF 89
C+ ++ + N +L+L I + +L L+ L L N
Sbjct: 52 CSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI 111
Query: 90 SGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSN 148
I F + +L L DN L+ IP+ L L L N A +
Sbjct: 112 R-QIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNR 169
Query: 149 CTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFS 207
L L L I + L L+ L L ++
Sbjct: 170 VPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-------------------- 209
Query: 208 HNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIP 267
++P + L LE L + N I F+
Sbjct: 210 ------DMP-NLTPLVGLEELEMSGNHFP-EIRPGSFH---------------------- 239
Query: 268 YVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLG 326
L +L++L++ + S I F + L L L N+ S F LR L L
Sbjct: 240 --GLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELH 296
Query: 327 LNNN 330
L++N
Sbjct: 297 LHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 75.6 bits (186), Expect = 3e-14
Identities = 46/210 (21%), Positives = 75/210 (35%), Gaps = 40/210 (19%)
Query: 59 NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGD-N 111
+++ L L IPS LS L+ L+L +N SIP F + +L L G+
Sbjct: 124 SLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELK 182
Query: 112 QLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIG 171
+L I L + LNL +P L+ L L +S N F P
Sbjct: 183 KLE-YISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFH 239
Query: 172 NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE-IGNLRNLEVLAL 230
L+ L++L++ + + I L +L L L
Sbjct: 240 GLSSLKKLWVMNSQVS--------------------------LIERNAFDGLASLVELNL 273
Query: 231 GLNKLVGVIPAEIF-NMSTIQGVGLQNNSL 259
N L +P ++F + + + L +N
Sbjct: 274 AHNNLS-SLPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 4e-06
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 59 NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQ 112
+ L +SG I LSSL+ L++ ++Q S I + F + +L L+ N
Sbjct: 219 GLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNN 277
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMFH 139
LS +P ++ + L + L+L N ++
Sbjct: 278 LS-SLPHDLFTPLRYLVELHLHHNPWN 303
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-29
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 713 LIGRGGFGSVYKARIQD---GMEVAVKVFNQQCGR--AFKS-FDVECEVMKSIRHRNIIK 766
L+GRGG G VY+A D VA+K+ ++ F++ E ++ +++
Sbjct: 41 LVGRGGMGDVYEAE--DTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVV- 97
Query: 767 IISCCSIGDF----KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
I DF L+ + + + L L L + + I+ + SAL+
Sbjct: 98 -----PIHDFGEIDGQLY--VDMRLINGVDLAAML-RRQGPLAPPRAVAIVRQIGSALDA 149
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YM 879
++ H D+KP N+L+ + A+L DFGI T E TQ T+G YM
Sbjct: 150 ---AHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE----KLTQLGNTVGTLYYM 202
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
A E SE + D+Y +L E TG P
Sbjct: 203 APERFSESHATYRADIYALTCVLYECLTGSPP 234
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 8e-29
Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 18/203 (8%)
Query: 713 LIGRGGFGSVYKAR--IQDGMEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIKIIS 769
I GG G +Y A +G V +K ++ E + + + H +I++I +
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146
Query: 770 CCSIGDFKALFKA-LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
D + +EY+ SL++ L + + + ++++ AL YL+ S
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK---LPVAEAIAYLLEILPALSYLH---S 200
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR 888
+++ DLKP N++L + + L D G + T G+ A E
Sbjct: 201 IGLVYNDLKPENIMLTEEQLK-LIDLGAVSRINSFGYLY------GTPGFQAPEI-VRTG 252
Query: 889 VSTNGDVYNFGVMLMETFTGKKP 911
+ D+Y G L
Sbjct: 253 PTVATDIYTVGRTLAALTLDLPT 275
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-28
Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 22/284 (7%)
Query: 260 SGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGN 318
SGSL SIP ++ L L N + I N L L L N + +F +
Sbjct: 40 SGSLNSIPSGLTEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSS 98
Query: 319 LRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLK 378
L +L+ L L+ N+L++L+ LS+ L F++L N + +L+ L+
Sbjct: 99 LGSLEHLDLSYNYLSNLSSSW--FKPLSS---LTFLNLLGNPYKTLGETSLFSHLT-KLQ 152
Query: 379 IFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG 437
I + + + I + LT L + ++L P +L +Q + L +
Sbjct: 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI- 211
Query: 438 SIPDEV-CRLAKVYQLDLSNNKLSG----SIPAC----FGDLASLRNLSLASNELISVIP 488
+ + + V L+L + L + + RN+ + L +
Sbjct: 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQ-VM 270
Query: 489 STFWNLKDILYLNLSSNSLTGPLPLEI-GNLKVLVKIDFSMNNF 531
+ +L L S N L +P I L L KI N +
Sbjct: 271 KLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 7e-28
Identities = 53/281 (18%), Positives = 107/281 (38%), Gaps = 23/281 (8%)
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA-SK 297
IP+ + ++ + L NN ++ + + R NL+ L L N + +I F++
Sbjct: 46 IPSGLT--EAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGS 101
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357
L L+L N S S F L +L L L N +L E S S L+ L+ + +
Sbjct: 102 LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTL-GETSLFSHLTK---LQILRVG 157
Query: 358 SNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIP 416
+ + RK L+ L+ ++ ++ S + ++ N+ L +
Sbjct: 158 NMDTFTKIQRKDFAGLT-FLEELEIDASDLQ-SYEPKSLKSIQNVSHLILHMKQHI-LLL 214
Query: 417 -ITLGKLQKLQVLYFPDNKLEG----SIP----DEVCRLAKVYQLDLSNNKLSGSIPACF 467
I + ++ L D L+ + + + + + +++ L +
Sbjct: 215 EIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLL 273
Query: 468 GDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT 508
++ L L + N+L SV F L + + L +N
Sbjct: 274 NQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-24
Identities = 57/346 (16%), Positives = 110/346 (31%), Gaps = 71/346 (20%)
Query: 269 VRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLN 328
+ + SIP+ + + L+L N + S NL+ L L
Sbjct: 28 LSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLT 84
Query: 329 NNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVS 388
+N + ++ E SSL + LE +DLS N + + S F
Sbjct: 85 SNGINTI--EEDSFSSLGS---LEHLDLSYNYLSNL-----------SSSWFK------- 121
Query: 389 GSIPEEIGNLTNLIGFYLGGNNLNGSIP--ITLGKLQKLQVLYFPDNKLEGSIPDEVCRL 446
L++L L GN ++ L KLQ+L + I +
Sbjct: 122 --------PLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKD--- 169
Query: 447 AKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNS 506
F L L L + +++L S P + +++++ +L L
Sbjct: 170 --------------------FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209
Query: 507 LTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGI--------KDLQFLFLEYNILQGS 558
L + + + ++ + + + + + + L
Sbjct: 210 HILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-Q 268
Query: 559 IPDSFGDLMSLKSLNLSNNNLSGSIPVS-LEKLSYLKDLNLSFNKL 603
+ + L L S N L S+P ++L+ L+ + L N
Sbjct: 269 VMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 4e-24
Identities = 62/319 (19%), Positives = 119/319 (37%), Gaps = 51/319 (15%)
Query: 47 TCDVHSHRVTAL------NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQFSGSIPF 95
C S + ++ + L LS I + L +LQ+L L SN + +I
Sbjct: 35 ICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEE 93
Query: 96 SIF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIP-SALSNCTYLR 153
F ++ +L+ L N LS + ++ L LNL N + S S+ T L+
Sbjct: 94 DSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQ 152
Query: 154 ILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212
ILR+ D I ++ LT LEEL + + LQ +Y+ L+
Sbjct: 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ-SYEPKSLK---------------- 195
Query: 213 CEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSG-SLQSIP--- 267
+++N+ L L + + + ++ S+++ + L++ L +
Sbjct: 196 --------SIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGE 246
Query: 268 ---YVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKR 324
++ + + + + S L LE +N F L +L++
Sbjct: 247 TNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQK 305
Query: 325 LGLNNNHLTSLTLELSFLS 343
+ L+ N + +LS
Sbjct: 306 IWLHTNPWDCSCPRIDYLS 324
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 2e-23
Identities = 44/252 (17%), Positives = 103/252 (40%), Gaps = 18/252 (7%)
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYF 430
L+ ++K D+S+ ++ ++ NL L N +N +I + L L+ L
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDL 107
Query: 431 PDNKLEGSIPDEVCR-LAKVYQLDLSNNKLSGSIP--ACFGDLASLRNLSLASNELISVI 487
N L ++ + L+ + L+L N ++ + F L L+ L + + + + I
Sbjct: 108 SYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKI 165
Query: 488 PS-TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQ 546
F L + L + ++ L P + +++ + + M ++ + ++
Sbjct: 166 QRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVE 225
Query: 547 FLFLEYNILQG----SIP----DSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNL 598
L L L + +S + +++ +++ +L + L ++S L +L
Sbjct: 226 CLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEF 284
Query: 599 SFNKLEGEIPKG 610
S N+L+ +P G
Sbjct: 285 SRNQLKS-VPDG 295
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 64/301 (21%), Positives = 123/301 (40%), Gaps = 36/301 (11%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRN 763
+ ++++G+G +V++ R + G A+KVFN R E EV+K + H+N
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS--SNYILDIFQRLNIMIDVASALE 821
I+K+ + + L +E+ P GSL L + Y L + L ++ DV +
Sbjct: 69 IVKLFAIEEETTTRHKV--LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 822 YLYFGYSTPVIHCDLKPSNVLLG----DNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
+L ++H ++KP N++ V L+DFG + L ++QFV+ T
Sbjct: 127 HL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE---E 180
Query: 878 YMA---LEYGSEGRVSTNG-----DVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929
Y+ E + D+++ GV TG P F +
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP----FRPFEGPRRNKE-- 234
Query: 930 LLISIM-KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+M KI+ G A+ + + +M + C++ S ++ ++ +L+
Sbjct: 235 ----VMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSL-SRGLQVLLTPVLANILEA 289
Query: 989 N 989
+
Sbjct: 290 D 290
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 4e-28
Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMK-SIRHRNIIK 766
F +++G G G++ + D +VAVK +C F D E ++++ S H N+I+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIR 82
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
C+ D + + +A+E +L++Y+ ++ + + ++ S L +L
Sbjct: 83 YF--CTEKDRQFQY--IAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL--- 134
Query: 827 YSTPVIHCDLKPSNVLLGD-----NMVAHLSDFGITKLLTREDQFVTQTQTPA-TIGYMA 880
+S ++H DLKP N+L+ + A +SDFG+ K L ++ T G++A
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 881 ---LEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
L + + D+++ G + +
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH 228
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 9e-28
Identities = 58/292 (19%), Positives = 106/292 (36%), Gaps = 39/292 (13%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G GGF V + DG A+K + + E ++ + H NI+++++ C
Sbjct: 36 KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 772 SI--GDFKALFKALALEYMPHGSLEKYLY---SSNYILDIFQRLNIMIDVASALEYLYFG 826
G + L L + G+L + L Q L +++ + LE ++
Sbjct: 96 LRERGAKHEAW--LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH-- 151
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA-------TIGYM 879
+ H DLKP+N+LLGD L D G + Q T TI Y
Sbjct: 152 -AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 880 A---LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
A S + DV++ G +L G+ P + +F +G ++ + + +
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL-----AVQNQLS 265
Query: 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
I S Q + P +R + ++++L +
Sbjct: 266 IPQSPRHSSALWQLLNS-------------MMTVDPHQRPHIPLLLSQLEAL 304
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 5e-27
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGR--AFKS-FDVECEVMKSIRHRNIIKII 768
+G GG +VY A ++VA+K F+ E + H+NI+ +I
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 769 SCCSIGDFKAL-FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ + + L +EY+ +L +Y+ S+ L + +N + +++ +
Sbjct: 78 D---VDEEDDCYY--LVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKH---AH 128
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YMALEYG 884
++H D+KP N+L+ N + DFGI K L+ + TQT +G Y + E
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE----TSLTQTNHVLGTVQYFSPEQA 184
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGKKP 911
D+Y+ G++L E G+ P
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPP 211
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 9e-27
Identities = 62/307 (20%), Positives = 111/307 (36%), Gaps = 40/307 (13%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
++G+G +V++ R + G A+KVFN R E EV+K + H+NI+K+ +
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYS--SNYILDIFQRLNIMIDVASALEYLYFGYS 828
+ L +E+ P GSL L + Y L + L ++ DV + +L
Sbjct: 76 EEETTTRHKV--LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RE 130
Query: 829 TPVIHCDLKPSNVLLG----DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA---L 881
++H ++KP N++ V L+DFG + L ++QFV+ T Y+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE---YLHPDMY 187
Query: 882 EYGSEGRVSTNG-----DVYNFGVMLMETFTGKKP---------TNEIFNEGMTLKHWVN 927
E + D+++ GV TG P E+ + +T K
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247
Query: 928 DWLLISIMK---IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984
+ G + + + + N+ EK +
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL----EADQEKCWGFDQFFAE 303
Query: 985 LLKINDL 991
I
Sbjct: 304 TSDILHR 310
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-26
Identities = 62/321 (19%), Positives = 106/321 (33%), Gaps = 40/321 (12%)
Query: 672 ARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKAR-IQDG 730
+ +R + D + + E + + +GRG FG V++ + Q G
Sbjct: 24 SAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTG 83
Query: 731 MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPH 790
+ AVK + R E + I+ + G + +F +E +
Sbjct: 84 FQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIF----MELLEG 134
Query: 791 GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVA 849
GSL + + L + L + LEYL ++ ++H D+K NVLL + A
Sbjct: 135 GSLGQLIKQMG-CLPEDRALYYLGQALEGLEYL---HTRRILHGDVKADNVLLSSDGSRA 190
Query: 850 HLSDFGITKLLTREDQFVTQTQTPATIG---YMALEYGSEGRVSTNGDVYNFGVMLMETF 906
L DFG L + + G +MA E D+++ M++
Sbjct: 191 ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 250
Query: 907 TGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAME 966
G P + L +KI RE A + E
Sbjct: 251 NGCHPWTQY--FRGPL-----------CLKIASEPPPIREIPPSCAPL-TAQAI----QE 292
Query: 967 CTVESPEKRINAKEIVTRLLK 987
+ P R +A E L +
Sbjct: 293 GLRKEPVHRASAME----LRR 309
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 3e-26
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGR--AFKS-FDVECEVMKSIRHRNIIKII 768
++G GG V+ AR ++D +VAVKV R +F F E + ++ H I+ +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
+ +EY+ +L + + + + + ++ D AL + +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNF---SHQ 134
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YMALEYGS 885
+IH D+KP+N+++ + DFGI + + D + TQT A IG Y++ E
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKP 911
V DVY+ G +L E TG+ P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 114 bits (285), Expect = 4e-26
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 31/228 (13%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISC- 770
+G GGFG V + G +VA+K Q+ + + + +E ++MK + H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 771 ---CSIGDFKALFKALALEYMPHGSLEKYL--YSSNYILDIFQRLNIMIDVASALEYLYF 825
+ LA+EY G L KYL + + L ++ D++SAL YL+
Sbjct: 82 DGLQKLAPNDLPL--LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH- 138
Query: 826 GYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
+IH DLKP N++L ++ + D G K L + + T Y+A E
Sbjct: 139 --ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTL---QYLAPE 193
Query: 883 ------YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKH 924
Y D ++FG + E TG +P +
Sbjct: 194 LLEQKKYTVT------VDYWSFGTLAFECITGFRPFLPNWQPVQWHGK 235
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 5e-26
Identities = 47/207 (22%), Positives = 79/207 (38%), Gaps = 12/207 (5%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKV--FNQQCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G +G K R DG + K + + E +++ ++H NI++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIF---QRLNIMIDVASALEYL--Y 824
L+ + +EY G L + L +M + AL+
Sbjct: 73 RIIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG 884
V+H DLKP+NV L L DFG+ ++L + F +T T YM+ E
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKTFV-GTPYYMSPEQM 188
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ + D+++ G +L E P
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPP 215
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 5e-26
Identities = 64/284 (22%), Positives = 110/284 (38%), Gaps = 35/284 (12%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVK---VFNQQCGRAFKSFDVECEVMKSIRH 761
F IGRG F VY+A + DG+ VA+K +F+ +A E +++K + H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIF---QRLNIMIDVAS 818
N+IK + S + L + LE G L + + + + + S
Sbjct: 92 PNVIKYYA--SFIEDNELN--IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV-TQTQTPATIG 877
ALE+++ S V+H D+KP+NV + V L D G+ + + + + TP
Sbjct: 148 ALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY--- 201
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937
YM+ E E + D+++ G +L E + P +L KI
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-----------CKKI 250
Query: 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
D + + + + C PEKR + +
Sbjct: 251 EQC------DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-25
Identities = 56/273 (20%), Positives = 110/273 (40%), Gaps = 33/273 (12%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKV--FNQQCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G FG + +DG + +K ++ + + E V+ +++H NI++
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYL-YSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
S + +L+ + ++Y G L K + + Q L+ + + AL++++
Sbjct: 91 --SFEENGSLY--IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---D 143
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR 888
++H D+K N+ L + L DFGI ++L + + T Y++ E
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL-ARACI-GTPYYLSPEICENKP 201
Query: 889 VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDI 948
+ D++ G +L E T K F E ++K+ L ++KI+ GS +
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHA----F-EAGSMKN-----L---VLKIISGSF---PPV 245
Query: 949 QFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
S V + +P R + I
Sbjct: 246 SLHYSYDLRSLV----SQLFKRNPRDRPSVNSI 274
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 3e-25
Identities = 54/254 (21%), Positives = 91/254 (35%), Gaps = 42/254 (16%)
Query: 260 SGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGN 318
LQ++P + ++L GN S +P F L+ L L N + + F
Sbjct: 20 QQGLQAVPVGIPAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTG 78
Query: 319 LRNLKRLGL-NNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSL 377
L L++L L +N L S+ + L + L +
Sbjct: 79 LALLEQLDLSDNAQLRSVDPA-----TFHGLGRLHTLHLDRCGL---------------- 117
Query: 378 KIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKL 435
+ + L L YL N L ++P T L L L+ N++
Sbjct: 118 -----------QELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRI 165
Query: 436 EGSIPDEV-CRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWN 493
S+P+ L + +L L N+++ + F DL L L L +N L ++
Sbjct: 166 S-SVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 223
Query: 494 LKDILYLNLSSNSL 507
L+ + YL L+ N
Sbjct: 224 LRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 7e-25
Identities = 62/250 (24%), Positives = 94/250 (37%), Gaps = 39/250 (15%)
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
+P I + + + L N ++ C L IL L N A L
Sbjct: 25 AVPVGIPAAS---QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL 81
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNK 234
LE+L LS N Q+ + L L L L
Sbjct: 82 LEQLDLSDNA----------QL---------------RSVDPATFHGLGRLHTLHLDRCG 116
Query: 235 LVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293
L + +F ++ +Q + LQ+N+L +L + L NL L+L GN S S+P F
Sbjct: 117 LQ-ELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS-SVPERAF 173
Query: 294 -NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLE 352
L RL L +N + P F +L L L L N+L++L E L+ L L+
Sbjct: 174 RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA--LAPLRA---LQ 228
Query: 353 FIDLSSNSID 362
++ L+ N
Sbjct: 229 YLRLNDNPWV 238
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 9e-24
Identities = 66/250 (26%), Positives = 103/250 (41%), Gaps = 42/250 (16%)
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
++P I + R+ L N S ++F RNL L L++N L + + + + L+
Sbjct: 25 AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARI--DAAAFTGLA 80
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFY 405
LE +DLS N+ L S+ L L +
Sbjct: 81 L---LEQLDLSDNA-----------QLR---------------SVDPATFHGLGRLHTLH 111
Query: 406 LGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPDEVCR-LAKVYQLDLSNNKLSGSI 463
L L + L LQ LY DN L+ ++PD+ R L + L L N++S S+
Sbjct: 112 LDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS-SV 168
Query: 464 PA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI-GNLKVL 521
P F L SL L L N + V P F +L ++ L L +N+L+ LP E L+ L
Sbjct: 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRAL 227
Query: 522 VKIDFSMNNF 531
+ + N +
Sbjct: 228 QYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 5e-23
Identities = 56/233 (24%), Positives = 82/233 (35%), Gaps = 36/233 (15%)
Query: 384 DCNVSG--SIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIP 440
C G ++P I + +L GN ++ + + L +L+ N L I
Sbjct: 17 SCPQQGLQAVPVGIPAASQRI---FLHGNRISHVPAASFRACRNLTILWLHSNVLA-RID 72
Query: 441 DEV-CRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498
LA + QLDLS+N S+ F L L L L L + P F L +
Sbjct: 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQ 132
Query: 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP-NAIGGIKDLQFLFLEYNILQG 557
YL L N+L +P + + +L LFL N +
Sbjct: 133 YLYLQDNALQ-------------------------ALPDDTFRDLGNLTHLFLHGNRISS 167
Query: 558 SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610
+F L SL L L N ++ P + L L L L N L +P
Sbjct: 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTE 219
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 6e-23
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 5/211 (2%)
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431
+ + + + +S NL +L N L L L+ L
Sbjct: 29 GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88
Query: 432 DNKLEGSIPDEV-CRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPS 489
DN S+ L +++ L L L + F LA+L+ L L N L ++
Sbjct: 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDD 147
Query: 490 TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLF 549
TF +L ++ +L L N ++ L L ++ N + V P+A + L L+
Sbjct: 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207
Query: 550 LEYNILQGSIP-DSFGDLMSLKSLNLSNNNL 579
L N L ++P ++ L +L+ L L++N
Sbjct: 208 LFANNLS-ALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 2e-13
Identities = 31/137 (22%), Positives = 45/137 (32%), Gaps = 11/137 (8%)
Query: 59 NISHLSLSG-----TIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDN 111
+ L LS ++ L L +L L + +F + L+ L DN
Sbjct: 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDN 139
Query: 112 QLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI- 170
L +P + +L L L N A L L L N A +
Sbjct: 140 ALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HVHPHAF 197
Query: 171 GNLTKLEELYLSFNGLQ 187
+L +L LYL N L
Sbjct: 198 RDLGRLMTLYLFANNLS 214
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 59 NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQ 112
N++HL L G ++P R L SL L LH N+ + + F ++ L L N
Sbjct: 154 NLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLMTLYLFANN 212
Query: 113 LSGEIPTNICSNLPFFESLNLSKNMFH 139
LS +PT + L + L L+ N +
Sbjct: 213 LS-ALPTEALAPLRALQYLRLNDNPWV 238
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-25
Identities = 53/285 (18%), Positives = 109/285 (38%), Gaps = 43/285 (15%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKV--FNQQCGRAFKSFDVECEVMKSIRHRN--IIKI 767
IG GG V++ + A+K + + S+ E + ++ + II++
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ ++ + +E + L +L +D ++R + ++ A+ + +
Sbjct: 94 YDY--EITDQYIY--MVMECG-NIDLNSWL-KKKKSIDPWERKSYWKNMLEAVHTI---H 144
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA------- 880
++H DLKP+N L+ D M+ L DFGI + + V + T+ YM
Sbjct: 145 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 881 ----LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
S+ ++S DV++ G +L GK P +I N+ L ++ I
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-- 261
Query: 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ ++ + C P++RI+ E+
Sbjct: 262 ---PDIPEKDLQDVLKC-------------CLKRDPKQRISIPEL 290
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 4e-25
Identities = 43/353 (12%), Positives = 83/353 (23%), Gaps = 62/353 (17%)
Query: 670 LIARNRKRGRQQPNDAD-------MPQEATWRRFSYLELCQATDGFSENNLIGRGGFGSV 722
LI R+ ++P PQ A S L Q + G V
Sbjct: 21 LIGYCREEALKEPAAMVEAVTATVWPQNAETTVDS--LLSQGERKLKLVEPLRVGDRSVV 78
Query: 723 YKAR-IQDGMEVAVKVFNQ---QCGRAFKSFDVECEVMKSIRHRNII------------- 765
+ R ++ + A+KVF + + +
Sbjct: 79 FLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSD 138
Query: 766 --------KIISCCSIGDFKALFKALALEYMPHGSLE------KYLYSSNYILDIFQRLN 811
D A+ L L LE ++Y I
Sbjct: 139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHI 198
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
+ + L S ++H P N+ + + L D L + +
Sbjct: 199 LTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVS---ALWKVGTRGPASS 252
Query: 872 TPATIGYMA--LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929
P T Y S + + + G+ + + P F
Sbjct: 253 VPVT--YAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP----FGLVTPGIKGSWKR 306
Query: 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
+ + + S + + + + +R+ E +
Sbjct: 307 PSLRVPGTDSLAFGSCTPL----PDFVKTLIGRF----LNFDRRRRLLPLEAM 351
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 6e-25
Identities = 55/285 (19%), Positives = 109/285 (38%), Gaps = 43/285 (15%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKV--FNQQCGRAFKSFDVECEVMKSIRH--RNIIKI 767
IG GG V++ + A+K + + S+ E + ++ II++
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ ++ + +E + L +L +D ++R + ++ A+ + +
Sbjct: 75 YD--YEITDQYIY--MVMEC-GNIDLNSWL-KKKKSIDPWERKSYWKNMLEAVHTI---H 125
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE----- 882
++H DLKP+N L+ D M+ L DFGI + + V + T+ YM E
Sbjct: 126 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 883 ------YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
S+ ++S DV++ G +L GK P +I N+ L ++ I
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 244
Query: 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
I + + + C P++RI+ E+
Sbjct: 245 IPE--------------KDLQDVL----KCCLKRDPKQRISIPEL 271
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 9e-25
Identities = 62/330 (18%), Positives = 124/330 (37%), Gaps = 51/330 (15%)
Query: 672 ARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDG--FSENNLIGRGGFGSVYKARIQD 729
K RQ + D+ + + S C + G +S IG GG V++ +
Sbjct: 20 TAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 730 GMEVAVKV-----FNQQCGRAFKSFDVECEVMKSIRH--RNIIKIISCCSIGDFKALFKA 782
A+K + Q ++++ E + ++ II++ + ++
Sbjct: 80 KQIYAIKYVNLEEADNQTLDSYRN---EIAYLNKLQQHSDKIIRLYD--YEITDQYIY-- 132
Query: 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVL 842
+ +E + L +L +D ++R + ++ A+ + + ++H DLKP+N L
Sbjct: 133 MVMEC-GNIDLNSWL-KKKKSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFL 187
Query: 843 LGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE-----------YGSEGRVST 891
+ D M+ L DFGI + + V + + YM E S+ ++S
Sbjct: 188 IVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 892 NGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFV 951
DV++ G +L GK P +I N+ L ++ I I +
Sbjct: 247 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE------------ 294
Query: 952 AKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + C P++RI+ E+
Sbjct: 295 --KDLQDVL----KCCLKRDPKQRISIPEL 318
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 66/296 (22%), Positives = 112/296 (37%), Gaps = 44/296 (14%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISC 770
++ GGF VY+A+ + G E A+K ++ E MK + H NI++ S
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 771 CSIGD---FKALFKALALEYMPHGSLEKYL--YSSNYILDIFQRLNIMIDVASALEYLYF 825
SIG + L L + G L ++L S L L I A+++++
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH- 153
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA----------T 875
P+IH DLK N+LL + L DFG ++ + Q A T
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 876 IGYMA---LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932
Y ++ S + D++ G +L + P F +G
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP----FEDG------------- 256
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ ++IV+G S + M +PE+R++ E+V +L +I
Sbjct: 257 AKLRIVNGKYSIPPHDTQ--YTVFHSLIRAM----LQVNPEERLSIAEVVHQLQEI 306
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-24
Identities = 36/288 (12%), Positives = 79/288 (27%), Gaps = 58/288 (20%)
Query: 671 IARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDG----FSENNLIGRGGFGSVYKAR 726
R Q D + + W + ++G+ + +A
Sbjct: 40 NVRTTSEYMQSAAD-SLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEAT 98
Query: 727 -IQDGMEVAVKVF----------------------------NQQCGRAFKSFDVECEVMK 757
+ G V V NQ+ + F +++K
Sbjct: 99 DQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158
Query: 758 SIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMI 814
+ + +I++ + F + + L S ++ L RL + +
Sbjct: 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTL 218
Query: 815 DVASALEYLY-FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP 873
V L L+ +G ++H L+P +++L L+ F +P
Sbjct: 219 QVIRLLASLHHYG----LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG------ASAVSP 268
Query: 874 ATIGYMALEY----------GSEGRVSTNGDVYNFGVMLMETFTGKKP 911
G+ E ++ D + G+ + + P
Sbjct: 269 IGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-24
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQ---QCGRAFKSFDVECEVMKSIRHRNIIKII 768
L+G+G F VY+A I G+EVA+K+ ++ + E ++ ++H +I+++
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
+ D ++ L LE +G + +YL + + + M + + + YL+ S
Sbjct: 78 NY--FEDSNYVY--LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---S 130
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV-TQTQTPATIGYMALE----- 882
++H DL SN+LL NM ++DFG+ L + T TP Y++ E
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN---YISPEIATRS 187
Query: 883 -YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+G E DV++ G M G+ P
Sbjct: 188 AHGLE------SDVWSLGCMFYTLLIGRPP 211
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 68/292 (23%), Positives = 115/292 (39%), Gaps = 59/292 (20%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
++G+G +G VY R + + + +A+K ++ R + E + K ++H+NI++ +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL--NIMIDVASALEYLYFGYST 829
S F +F +E +P GSL L S L ++ + L+YL +
Sbjct: 89 SENGFIKIF----MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL---HDN 141
Query: 830 PVIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTREDQFVTQTQTPATIG---YMALE--Y 883
++H D+K NVL+ + V +SDFG +K L T G YMA E
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-----INPCTETFTGTLQYMAPEIID 196
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM-KIVDGSL 942
D+++ G ++E TGK P E+ + M K+ +
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-------------QAAMFKVGMFKV 243
Query: 943 -------LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+S E F+ K C P+KR A + LL
Sbjct: 244 HPEIPESMSAEAKAFILK-------------CFEPDPDKRACAND----LLV 278
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 5e-24
Identities = 50/314 (15%), Positives = 115/314 (36%), Gaps = 34/314 (10%)
Query: 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353
+ ++ K++ + T +L + L +T++ + L
Sbjct: 17 ALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVTTI-------EGVQYLNNLIG 67
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
++L N I + + NL+ + ++S + I L ++ L +
Sbjct: 68 LELKDNQITDL---APLKNLTK-ITELELSGNPLK--NVSAIAGLQSIKTLDLTSTQITD 121
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
P L L LQVLY N++ +I + L + L + N ++S + +L+ L
Sbjct: 122 VTP--LAGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQVS-DLTP-LANLSKL 175
Query: 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533
L N++ + S +L +++ ++L +N ++ PL N L + + +
Sbjct: 176 TTLKADDNKISDI--SPLASLPNLIEVHLKNNQISDVSPLA--NTSNLFIVTLTNQTITN 231
Query: 534 VIPNAIGGIKDLQFLFLEYNILQGSI-PDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSY 592
+L + I P + D + ++ NL+ ++ + +SY
Sbjct: 232 QPVFYN---NNLVVPNVVKGPSGAPIAPATISD-----NGTYASPNLTWNLTSFINNVSY 283
Query: 593 LKDLNLSFNKLEGE 606
+ +++F
Sbjct: 284 TFNQSVTFKNTTVP 297
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 1e-21
Identities = 59/314 (18%), Positives = 112/314 (35%), Gaps = 52/314 (16%)
Query: 221 NLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLW 280
L N +A G + + + ++ I + ++ +++ + Y L NL L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIEGVQY--LNNLIGLELK 71
Query: 281 GNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340
N + + N +K++ LEL N L+++K L L + +T +
Sbjct: 72 DNQIT-DLAPL-KNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDV----- 122
Query: 341 FLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTN 400
+ L+ L+ + L N I I + LTN
Sbjct: 123 --TPLAGLSNLQVLYLDLNQITNI----------------------------SPLAGLTN 152
Query: 401 LIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460
L +G ++ P L L KL L DNK+ I + L + ++ L NN++S
Sbjct: 153 LQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS-DISP-LASLPNLIEVHLKNNQIS 208
Query: 461 GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKV 520
P + ++L ++L + + + NL + S + P I +
Sbjct: 209 DVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPI--APATISDNGT 264
Query: 521 LVKIDFSMNNFSGV 534
+ + N S +
Sbjct: 265 YASPNLTWNLTSFI 278
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 1e-18
Identities = 48/292 (16%), Positives = 89/292 (30%), Gaps = 51/292 (17%)
Query: 144 SALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIF 203
+ ++ + +L + L G+ I
Sbjct: 13 FPDPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGV-------------TTI- 56
Query: 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL 263
+ L NL L L N++ + P + N++ I + L N L ++
Sbjct: 57 -------------EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NV 100
Query: 264 QSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLK 323
+I L +++ L L + + S L L L N + P L NL+
Sbjct: 101 SAIAG--LQSIKTLDLTSTQIT-DVTPLA-GLSNLQVLYLDLNQITNISP--LAGLTNLQ 154
Query: 324 RLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMS 383
L + N ++ L+ L+N L + N I I + +L +L +
Sbjct: 155 YLSIGNAQVSD-------LTPLANLSKLTTLKADDNKISDI---SPLASLP-NLIEVHLK 203
Query: 384 DCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKL 435
+ +S + N +NL L + L V+ P
Sbjct: 204 NNQISDV--SPLANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAP 253
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 2e-16
Identities = 50/288 (17%), Positives = 96/288 (33%), Gaps = 45/288 (15%)
Query: 73 LGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132
L++ + + + ++ + ++ + LS ++ +NL L
Sbjct: 15 DPALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTIEGVQYLNNL---IGLE 69
Query: 133 LSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDH 192
L N + L N T + L LS N I L ++ L L+ +
Sbjct: 70 LKDNQITD--LAPLKNLTKITELELSGNPLK--NVSAIAGLQSIKTLDLTSTQIT----- 120
Query: 193 GFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGV 252
++ + L NL+VL L LN++ + P + ++ +Q +
Sbjct: 121 ---------------------DVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYL 156
Query: 253 GLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFI 312
+ N +S L + L L L N S I + L + L+ N S
Sbjct: 157 SIGNAQVS-DLTPL--ANLSKLTTLKADDNKIS-DISPLA-SLPNLIEVHLKNNQISDVS 211
Query: 313 PSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNS 360
P N NL + L N +T+ + + + N + +
Sbjct: 212 P--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPIAPA 257
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 52/255 (20%), Positives = 86/255 (33%), Gaps = 50/255 (19%)
Query: 59 NISHLSLSG---TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
N+ L L T + L NL+ + L L N + + ++K L Q++
Sbjct: 64 NLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIA--GLQSIKTLDLTSTQITD 121
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIP--SALSNCTYLRILRLSYNDFAGGIPKEIGNL 173
P + L + L L N I S L+ T L+ L + + P + NL
Sbjct: 122 VTP---LAGLSNLQVLYLDLN----QITNISPLAGLTNLQYLSIGNAQVSDLTP--LANL 172
Query: 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233
+KL L N + +I + +L NL + L N
Sbjct: 173 SKLTTLKADDNKIS--------------------------DISP-LASLPNLIEVHLKNN 205
Query: 234 KLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSI-PNFI 292
++ V P + N S + V L N +++ + P NL + I P I
Sbjct: 206 QISDVSP--LANTSNLFIVTLTNQTIT----NQPVFYNNNLVVPNVVKGPSGAPIAPATI 259
Query: 293 FNASKLSRLELQKNS 307
+ + L N
Sbjct: 260 SDNGTYASPNLTWNL 274
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 5e-05
Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 8/103 (7%)
Query: 502 LSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD 561
++ P L +KI +N + + + + L + +I
Sbjct: 4 TQPTAINVIFPDP--ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE- 57
Query: 562 SFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
L +L L L +N ++ + L+ L+ + +L LS N L+
Sbjct: 58 GVQYLNNLIGLELKDNQIT-DLA-PLKNLTKITELELSGNPLK 98
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 8e-24
Identities = 59/289 (20%), Positives = 102/289 (35%), Gaps = 56/289 (19%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN------QQCGRAFKSFDVECEVMKS 758
F + +G G +G V+K R +DG AVK + R E +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLA----EVGSHEK 112
Query: 759 I-RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVA 817
+ +H +++ + + L+ L E SL+++ + L Q + D
Sbjct: 113 VGQHPCCVRLEQ--AWEEGGILY--LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTL 167
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
AL +L+ S ++H D+KP+N+ LG L DFG+ L Q P
Sbjct: 168 LALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDP---R 221
Query: 878 YMALE-----YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932
YMA E YG+ DV++ G+ ++E + + G + L
Sbjct: 222 YMAPELLQGSYGTA------ADVFSLGLTILEVACNMEL----PHGGEGWQQ-----LRQ 266
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + LS E + P+ R A+ +
Sbjct: 267 GYLPPEFTAGLSSELRSVLVM-------------MLEPDPKLRATAEAL 302
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 8e-24
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRN 763
F +GRGGFG V++A+ D A+K A + E + + + H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 764 IIKIISC----------CSIGDFKALFKALALEYMPHGSLEKYL--YSSNYILDIFQRLN 811
I++ + L+ + ++ +L+ ++ + + L+
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLY--IQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
I + +A A+E+L+ S ++H DLKPSN+ + V + DFG+ + ++++ T
Sbjct: 123 IFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 872 TPATIG----------YMALEYGSEGRVSTNGDVYNFGVMLME 904
YM+ E S D+++ G++L E
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 41/210 (19%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQ---QCGRAFKSFDVECEVMKSIRHRNIIKII 768
+G+GGF ++ A K+ + + +E + +S+ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
D +F + LE SL + + + R + + +YL+
Sbjct: 82 GF--FEDNDFVF--VVLELCRRRSLLELHKRRKALTEPEAR-YYLRQIVLGCQYLH---R 133
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF-VTQTQTPATIGYMALE----- 882
VIH DLK N+ L +++ + DFG+ + + + TP Y+A E
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN---YIAPEVLSKK 190
Query: 883 -YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ E DV++ G ++ GK P
Sbjct: 191 GHSFE------VDVWSIGCIMYTLLVGKPP 214
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 56/309 (18%), Positives = 106/309 (34%), Gaps = 70/309 (22%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
F E ++G+G FG V KAR D A+K + E ++ S+ H+ +++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVR 66
Query: 767 IISCCSIGDFKALFKA---------LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVA 817
+ + +EY +G+L ++S N + + +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT-- 875
AL Y++ S +IH DLKP N+ + ++ + DFG+ K + R +
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 876 -------IG---YMALE-------YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE 918
IG Y+A E Y + D+Y+ G++ E F+
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEK------IDMYSLGIIFFEMIYP-------FST 230
Query: 919 GMTLKHWVNDWLLISIMKIV------DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESP 972
GM + +L + + + + + + P
Sbjct: 231 GMERVN-----ILKKLRSVSIEFPPDFDDNKMKVEKKIIRL-------------LIDHDP 272
Query: 973 EKRINAKEI 981
KR A+ +
Sbjct: 273 NKRPGARTL 281
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 4e-23
Identities = 62/305 (20%), Positives = 118/305 (38%), Gaps = 59/305 (19%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVM-KSIRHRNIIK 766
++G G G+V G VAVK +E +++ +S H N+I+
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIR 73
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL------NIMIDVASAL 820
CS + L+ +ALE +L+ + S N + + +++ +AS +
Sbjct: 74 YY--CSETTDRFLY--IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 821 EYLYFGYSTPVIHCDLKPSNVLL-------------GDNMVAHLSDFGITKLLTREDQ-F 866
+L +S +IH DLKP N+L+ +N+ +SDFG+ K L F
Sbjct: 129 AHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 867 VTQTQTPA-TIGYMALE-------YGSEGRVSTNGDVYNFGVMLMETFTGKKP--TNEIF 916
T P+ T G+ A E ++ R++ + D+++ G + + K ++
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 917 NEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI 976
E ++ + + MK + L E +++ P KR
Sbjct: 246 RESNIIRGIFS----LDEMKCLHDRSLIAEATDLISQ-------------MIDHDPLKRP 288
Query: 977 NAKEI 981
A ++
Sbjct: 289 TAMKV 293
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 5e-23
Identities = 41/210 (19%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQ---QCGRAFKSFDVECEVMKSIRHRNIIKII 768
+G+GGF ++ A K+ + + +E + +S+ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
D +F + LE SL + + + R + + +YL+
Sbjct: 108 GF--FEDNDFVF--VVLELCRRRSLLELHKRRKALTEPEAR-YYLRQIVLGCQYLH---R 159
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF-VTQTQTPATIGYMALE----- 882
VIH DLK N+ L +++ + DFG+ + + + TP Y+A E
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN---YIAPEVLSKK 216
Query: 883 -YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ E DV++ G ++ GK P
Sbjct: 217 GHSFE------VDVWSIGCIMYTLLVGKPP 240
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 99.2 bits (247), Expect = 9e-23
Identities = 55/302 (18%), Positives = 97/302 (32%), Gaps = 42/302 (13%)
Query: 316 FGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375
+G R+L+ L + L + SLS L+ + + + I + ++ L
Sbjct: 39 YGGGRSLEYLLKRVDTEADLGQFTDIIKSLS----LKRLTVRAARIPSRILFGALRVLGI 94
Query: 376 S-LKIFDMSDCNVSGSIPEEIGNLT--NLIGFYLGGNNLNGSIP----ITLGKLQKLQVL 428
S L+ + + V+G+ P + T +L L + + L+VL
Sbjct: 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVL 154
Query: 429 YFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIP----ACFGDLASLRNLSLASNELI 484
++V + LDLS+N G C +L+ L+L + +
Sbjct: 155 SIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM- 213
Query: 485 SVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAI-GGIK 543
+ +G L +D S N+
Sbjct: 214 --------------------ETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253
Query: 544 DLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603
L L L + L+ +P L L+LS N L P E L + +L+L N
Sbjct: 254 QLNSLNLSFTGLK-QVPKGLPA--KLSVLDLSYNRLD-RNPSPDE-LPQVGNLSLKGNPF 308
Query: 604 EG 605
Sbjct: 309 LD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 94.2 bits (234), Expect = 5e-21
Identities = 51/284 (17%), Positives = 89/284 (31%), Gaps = 31/284 (10%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFS---IFNIHTLKLLSFGDNQLS 114
L + + SL+ L + + + I F + I L+ L+ + +++
Sbjct: 49 LKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT 108
Query: 115 GEIPTNICSN-LPFFESLNLSKNMFHGG--IPSALSNC--TYLRILRLSYNDFAGGIPKE 169
G P + P LNL + + L L++L ++ ++
Sbjct: 109 GTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ 168
Query: 170 IGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLA 229
+ L L LS N G P + L+ L +
Sbjct: 169 VRVFPALSTLDLSDNPELG------------------ERGLISALCPLKFPTLQVLALRN 210
Query: 230 LGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIP 289
G+ GV A +QG+ L +NSL + + L L L +P
Sbjct: 211 AGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVP 269
Query: 290 NFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
+ +KLS L+L N + L + L L N
Sbjct: 270 KGLP--AKLSVLDLSYNRLDRN--PSPDELPQVGNLSLKGNPFL 309
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 81.5 bits (201), Expect = 9e-17
Identities = 48/247 (19%), Positives = 74/247 (29%), Gaps = 44/247 (17%)
Query: 54 RVTALNISHLSLSGTIPSRLGNLS--SLQSLFLHSNQFSGSIPF----SIFNIHTLKLLS 107
+ L + +L ++GT P L + L L L + ++ + + LK+LS
Sbjct: 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLS 155
Query: 108 FGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNC----TYLRILRLSYNDFA 163
P +L+LS N G + C L++L L
Sbjct: 156 IAQAHSL-NFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214
Query: 164 ---GGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIG 220
G +L+ L LS N L+ A
Sbjct: 215 TPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD------------------------ 250
Query: 221 NLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLW 280
L L L L V P + + + + L N L + LP + L L
Sbjct: 251 WPSQLNSLNLSFTGLKQV-PKGLP--AKLSVLDLSYNRLDRNPSPD---ELPQVGNLSLK 304
Query: 281 GNHFSGS 287
GN F S
Sbjct: 305 GNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 7e-11
Identities = 33/170 (19%), Positives = 52/170 (30%), Gaps = 12/170 (7%)
Query: 35 NSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSI- 93
S + W + L+I+ ++ +L +L L N G
Sbjct: 131 VSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG 190
Query: 94 ------PFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIP-SAL 146
P + L L + G SG + + L+LS N +
Sbjct: 191 LISALCPLKFPTLQVLALRNAGMETPSGVCSALA-AARVQLQGLDLSHNSLRDAAGAPSC 249
Query: 147 SNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQ 196
+ L L LS+ +PK + KL L LS+N L L
Sbjct: 250 DWPSQLNSLNLSFTGLK-QVPKGL--PAKLSVLDLSYNRLDRNPSPDELP 296
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 1e-22
Identities = 55/241 (22%), Positives = 91/241 (37%), Gaps = 27/241 (11%)
Query: 381 DMSDCNVSG-----------SIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVL 428
+ V IP+ + + NL L N L + +LQVL
Sbjct: 1 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNL---DLSFNPLRHLGSYSFFSFPELQVL 57
Query: 429 YFPDNKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISV 486
+++ +I D L+ + L L+ N + S+ F L+SL+ L L S+
Sbjct: 58 DLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASL 115
Query: 487 IPSTFWNLKDILYLNLSSNSLTG-PLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDL 545
+LK + LN++ N + LP NL L +D S N + + + +
Sbjct: 116 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Query: 546 QF----LFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPV-SLEKLSYLKDLNLSF 600
L L N + I + LK L L N L S+P ++L+ L+ + L
Sbjct: 176 PLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHT 233
Query: 601 N 601
N
Sbjct: 234 N 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 3e-19
Identities = 57/261 (21%), Positives = 94/261 (36%), Gaps = 58/261 (22%)
Query: 224 NLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGN 282
+ + L L N L + + F + +Q + L + +++ Y L +L L L GN
Sbjct: 29 STKNLDLSFNPL-RHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGN 86
Query: 283 HFSGSIPNFIFNA-SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSF 341
S+ F+ S L +L + + + G+L+ LK L + +N + S L F
Sbjct: 87 PIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 145
Query: 342 LSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNL 401
S+L+N LE +DLSSN I I L +
Sbjct: 146 -SNLTN---LEHLDLSSNKIQSI-----------YCTDLR---------------VLHQM 175
Query: 402 IGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSG 461
L L N + I + ++ +L L N+L
Sbjct: 176 PLLNLS--------------------LDLSLNPMN-FIQPGAFKEIRLKELALDTNQLK- 213
Query: 462 SIPA-CFGDLASLRNLSLASN 481
S+P F L SL+ + L +N
Sbjct: 214 SVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-18
Identities = 51/256 (19%), Positives = 88/256 (34%), Gaps = 54/256 (21%)
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLT 174
+IP N+ + ++L+LS N + + L++L LS + I +L+
Sbjct: 21 KIPDNLPFST---KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLS 76
Query: 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLN 233
L L L+ N +Q + L +L+ L
Sbjct: 77 HLSTLILTGNPIQ--------------------------SLALGAFSGLSSLQKLVAVET 110
Query: 234 KLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPY----VRLPNLEELYLWGNHFSGSI 288
L + ++ T++ + + +N +QS L NLE L L N SI
Sbjct: 111 NLAS-LENFPIGHLKTLKELNVAHN----LIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SI 164
Query: 289 PNFIF-NASKL----SRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLS 343
++ L+L N + P F + LK L L+ N L S+ +
Sbjct: 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGI---- 219
Query: 344 SLSNCKYLEFIDLSSN 359
L+ I L +N
Sbjct: 220 -FDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 52/304 (17%), Positives = 84/304 (27%), Gaps = 84/304 (27%)
Query: 39 SFCNWTGVTCDVHSHRVTAL------NISHLSLSG----TIPSR-LGNLSSLQSLFLHSN 87
+T + + +L LS + S + LQ L L
Sbjct: 3 CVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 62
Query: 88 QFSGSIPFSIFNIHT-LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSAL 146
+ +I + + L L N + + S L + L +
Sbjct: 63 EIQ-TIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVET---------- 110
Query: 147 SNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQF 206
+ L G+L L+EL ++ N +Q
Sbjct: 111 ------NLASLENFPI--------GHLKTLKELNVAHNLIQ------------------- 137
Query: 207 SHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSI 266
++P NL NLE L L NK+ I L +
Sbjct: 138 -----SFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLR----------------VLHQM 175
Query: 267 PYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLG 326
P + L L L N + I F +L L L N F L +L+++
Sbjct: 176 PLLNL----SLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIW 230
Query: 327 LNNN 330
L+ N
Sbjct: 231 LHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 61/275 (22%), Positives = 97/275 (35%), Gaps = 69/275 (25%)
Query: 142 IPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ----GAYDHGFLQI 197
IP L + L LS+N + +L+ L LS +Q GAY
Sbjct: 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS----- 74
Query: 198 FVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQN 256
L +L L L N + + F +S++Q +
Sbjct: 75 ------------------------LSHLSTLILTGNPI-QSLALGAFSGLSSLQKLVAVE 109
Query: 257 NSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTF 316
+L+ SL++ P L L+EL + N S +P F
Sbjct: 110 TNLA-SLENFPIGHLKTLKELNVAHNLIQ-SFK----------------------LPEYF 145
Query: 317 GNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF-IDLSSNSIDGILSRKSVGNLSH 375
NL NL+ L L++N + S+ L L L +DLS N ++ I + +
Sbjct: 146 SNLTNLEHLDLSSNKIQSIYCTD--LRVLHQMPLLNLSLDLSLNPMNFI-QPGAFKEI-- 200
Query: 376 SLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGN 409
LK + + S+P+ I LT+L +L N
Sbjct: 201 RLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 4e-14
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 30/162 (18%)
Query: 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511
LDLS N L F L+ L L+ E+ ++ + +L + L L+ N + L
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS-L 91
Query: 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLMSLK 570
A G+ LQ L L S+ + G L +LK
Sbjct: 92 A-----------------------LGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLK 127
Query: 571 SLNLSNNNLSGSIPVS--LEKLSYLKDLNLSFNKLEGEIPKG 610
LN+++N + S + L+ L+ L+LS NK++ I
Sbjct: 128 ELNVAHNLIQ-SFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCT 167
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 3e-05
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 544 DLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNK 602
+ L L +N L+ SF L+ L+LS + +I + LS+L L L+ N
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNP 87
Query: 603 LEGEIPKG 610
++ + G
Sbjct: 88 IQ-SLALG 94
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 11/90 (12%)
Query: 59 NISHLSLSG----TIP----SRLGNLSSLQ-SLFLHSNQFSGSIPFSIFNIHTLKLLSFG 109
N+ HL LS +I L + L SL L N + I F LK L+
Sbjct: 150 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALD 208
Query: 110 DNQLSGEIPTNICSNLPFFESLNLSKNMFH 139
NQL +P I L + + L N +
Sbjct: 209 TNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 237
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 99.7 bits (248), Expect = 2e-22
Identities = 40/243 (16%), Positives = 79/243 (32%), Gaps = 34/243 (13%)
Query: 705 TDGFSENNLIGRGGFGSVYKAR------IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKS 758
+ ++L+G G F VY+A ++ + +KV F E +K
Sbjct: 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKP 123
Query: 759 IRHRNIIKIISCCSIGDFKALFKALALEYMPHGSL----EKYLYSSNYILDIFQRLNIMI 814
+K S + L E +G+L Y + ++ ++ +
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLV----GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAM 179
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH-----------LSDFG---ITKLL 860
+ +E + + +IH D+KP N +LG+ + L D G KL
Sbjct: 180 RMLYMIEQV---HDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLF 236
Query: 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM 920
+ F + +T G+ +E S + D + + G +
Sbjct: 237 PKGTIFTAKCETS---GFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293
Query: 921 TLK 923
+
Sbjct: 294 KPE 296
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 99.2 bits (247), Expect = 2e-22
Identities = 52/269 (19%), Positives = 98/269 (36%), Gaps = 74/269 (27%)
Query: 714 IGRGGFGSVYKARI------QDGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSI-RHRNII 765
+GRG FG V +A VAVK+ + ++ E +++ I H N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYL----------------------YSSNYI 803
++ C+ + + +E+ G+L YL Y
Sbjct: 90 NLLGACTKPGGPLM---VIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP 146
Query: 804 LDIFQRLNIMI------------------------------DVASALEYLYFGY------ 827
+D+ +RL+ + D + + + +
Sbjct: 147 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM 206
Query: 828 ----STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY 883
S IH DL N+LL + V + DFG+ + + ++ +V + + +MA E
Sbjct: 207 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 266
Query: 884 GSEGRVSTNGDVYNFGVMLMETFT-GKKP 911
+ + DV++FGV+L E F+ G P
Sbjct: 267 IFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 98.2 bits (244), Expect = 5e-22
Identities = 32/242 (13%), Positives = 75/242 (30%), Gaps = 52/242 (21%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVF----------------------------NQQCG 743
++G+ + +A + G V V NQ+
Sbjct: 80 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139
Query: 744 RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS---S 800
+ F +++K + + +I++ + F + + L S +
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199
Query: 801 NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860
+ L RL + + V L L + ++H L+P +++L L+ F L
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASL---HHYGLVHTYLRPVDIVLDQRGGVFLTGFE---HL 253
Query: 861 TREDQFVTQTQTPATIGYMALEY-----------GSEGRVSTNGDVYNFGVMLMETFTGK 909
R+ V + + + E ++ + D + G+++ +
Sbjct: 254 VRDGARVVSSVSRG---FEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310
Query: 910 KP 911
P
Sbjct: 311 LP 312
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 7e-22
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 53/294 (18%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
+ +G G FG VYKA+ + G A KV + + + VE E++ + H I+K
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
++ L+ + +E+ P G+++ + + L Q + + AL +L+
Sbjct: 81 LLGAYYHDG--KLW--IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH-- 134
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFG----ITKLLTREDQFVTQTQTPATIGY-MAL 881
S +IH DLK NVL+ L+DFG K L + D F+ TP Y MA
Sbjct: 135 -SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG---TP----YWMAP 186
Query: 882 EYGSEGRVSTNG-----DVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM- 935
E + D+++ G+ L+E + P +E+ + + L I+
Sbjct: 187 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--------NPMRVLLKIAKSD 238
Query: 936 --KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
++ S S E F+ ++PE R +A + LL+
Sbjct: 239 PPTLLTPSKWSVEFRDFLKI-------------ALDKNPETRPSAAQ----LLE 275
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 97.6 bits (243), Expect = 7e-22
Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 27/215 (12%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRA-FKSFDVECEVMKSIRHRN 763
D F + + +G G G V+K G+ +A K+ + + A E +V+
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 764 IIK------IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVA 817
I+ SI +E+M GSL++ + + + I V
Sbjct: 93 IVGFYGAFYSDGEISI----------CMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVI 141
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA-TI 876
L YL + ++H D+KPSN+L+ L DFG++ L + + T
Sbjct: 142 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTR 194
Query: 877 GYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
YM+ E S D+++ G+ L+E G+ P
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 8e-22
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 58/225 (25%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFN----------QQCGRAFKSFDVECEVMKSIR 760
+G+G FG+VY AR Q +A+KV Q R E E+ +R
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR-------EVEIQSHLR 67
Query: 761 HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLN------IMI 814
H NI+++ D ++ L LEY P G++ + L + + +
Sbjct: 68 HPNILRLYGY--FHDATRVY--LILEYAPLGTVYRELQKL-------SKFDEQRTATYIT 116
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ--T 872
++A+AL Y + S VIH D+KP N+LLG ++DFG + T
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA---PSSRRTDLCGT 170
Query: 873 PATIGYMALE------YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
Y+ E + + D+++ GV+ E GK P
Sbjct: 171 LD---YLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPP 206
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 1e-21
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 50/289 (17%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
++ IG+G G+VY A + G EVA++ N Q + E VM+ ++ NI+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ +GD L+ + +EY+ GSL + + +D Q + + ALE+L+
Sbjct: 82 YLDSYLVGD--ELW--VVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH-- 133
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFG----ITKLLTREDQFVTQTQTPATIGY-MAL 881
S VIH D+K N+LLG + L+DFG IT ++ V TP Y MA
Sbjct: 134 -SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG---TP----YWMAP 185
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM---KIV 938
E + D+++ G+M +E G+ P + + LI+ ++
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE--------NPLRALYLIATNGTPELQ 237
Query: 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+ LS F+ + C EKR +AKE LL+
Sbjct: 238 NPEKLSAIFRDFLNR-------------CLEMDVEKRGSAKE----LLQ 269
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 2e-21
Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 50/289 (17%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
IG G G V AR G +VAVK+ + + + + E +M+ +H N+++
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ +G+ L+ + +E++ G+L + S L+ Q + V AL YL+
Sbjct: 107 MYKSYLVGE--ELW--VLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH-- 158
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFG----ITKLLTREDQFVTQTQTPATIGY-MAL 881
+ VIH D+K ++LL + LSDFG I+K + + V TP Y MA
Sbjct: 159 -AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG---TP----YWMAP 210
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM---KIV 938
E S +T D+++ G+M++E G+ P V + K+
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD--------SPVQAMKRLRDSPPPKLK 262
Query: 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+ +S F+ + V P++R A+E LL
Sbjct: 263 NSHKVSPVLRDFLER-------------MLVRDPQERATAQE----LLD 294
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 97.5 bits (242), Expect = 5e-21
Identities = 52/282 (18%), Positives = 95/282 (33%), Gaps = 49/282 (17%)
Query: 322 LKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFD 381
+ + + + +L S+ + L+ +
Sbjct: 1 MGETITVSTPIKQI-------FPDDAFAETIKDNLKKKSVTDA---VTQNELNS-IDQII 49
Query: 382 MSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPD 441
++ ++ S+ + I L N+ +L GN L I L L+ L L+ +NK++
Sbjct: 50 ANNSDIK-SV-QGIQYLPNVTKLFLNGNKLT-DIK-PLTNLKNLGWLFLDENKIK----- 100
Query: 442 EVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLN 501
DLS+ DL L++LSL N + + +L + L
Sbjct: 101 -----------DLSS----------LKDLKKLKSLSLEHNGISDING--LVHLPQLESLY 137
Query: 502 LSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD 561
L +N +T L L L + N S ++P + G+ LQ L+L N + S
Sbjct: 138 LGNNKITDITVLS--RLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI--SDLR 191
Query: 562 SFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603
+ L +L L L + L + + L
Sbjct: 192 ALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL 233
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 96.7 bits (240), Expect = 9e-21
Identities = 57/331 (17%), Positives = 117/331 (35%), Gaps = 25/331 (7%)
Query: 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
+ E I ++ + L+K S + + L ++ ++ NN+ +
Sbjct: 1 MGETITVSTPIK-QIFPDD-AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 56
Query: 334 SLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE 393
S+ + + + L+ N + I K + NL + L + + + +
Sbjct: 57 SV-------QGIQYLPNVTKLFLNGNKLTDI---KPLTNLKN-LGWLFLDENKIK-DL-S 103
Query: 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453
+ +L L L N ++ I L L +L+ LY +NK+ + + RL K+ L
Sbjct: 104 SLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNKI--TDITVLSRLTKLDTLS 159
Query: 454 LSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL 513
L +N++S I L L+NL L+ N + + LK++ L L S
Sbjct: 160 LEDNQIS-DIVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPIN 215
Query: 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLN 573
NL V + + + + G + + + F +++
Sbjct: 216 HQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAK 275
Query: 574 LSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
+ + +SY D + K+E
Sbjct: 276 ARFHGRVTQPLKEVYTVSYDVDGTVIKTKVE 306
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 88.2 bits (218), Expect = 4e-18
Identities = 46/232 (19%), Positives = 82/232 (35%), Gaps = 34/232 (14%)
Query: 221 NLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLW 280
L + + +++I + N+ + S+Q I Y LPN+ +L+L
Sbjct: 19 AFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQGIQY--LPNVTKLFLN 73
Query: 281 GNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL----- 335
GN + I + N L L L +N S+ +L+ LK L L +N ++ +
Sbjct: 74 GNKLT-DIKP-LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISDINGLVH 129
Query: 336 -----TLELSF-----LSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH--SLKIFDMS 383
+L L ++ LS L+ + L N I + L+ L+ +S
Sbjct: 130 LPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQI------SDIVPLAGLTKLQNLYLS 183
Query: 384 DCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKL 435
++S + + L NL L L + D L
Sbjct: 184 KNHIS-DL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL 233
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 77.8 bits (191), Expect = 8e-15
Identities = 52/285 (18%), Positives = 104/285 (36%), Gaps = 55/285 (19%)
Query: 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114
N+ S++ + L+S+ + +++ S+ I + + L N+L+
Sbjct: 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLT 78
Query: 115 GEIPTNICSNLPFFESLNLSKNMFHGGIP--SALSNCTYLRILRLSYN---DFAGGIPKE 169
P NL L L +N I S+L + L+ L L +N D G
Sbjct: 79 DIKPLTNLKNL---GWLFLDEN----KIKDLSSLKDLKKLKSLSLEHNGISDING----- 126
Query: 170 IGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLA 229
+ +L +LE LYL N + +I + L L+ L+
Sbjct: 127 LVHLPQLESLYLGNNKIT--------------------------DITV-LSRLTKLDTLS 159
Query: 230 LGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIP 289
L N++ ++P + ++ +Q + L N +S L+++ L NL+ L L+
Sbjct: 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHIS-DLRALAG--LKNLDVLELFSQECLNKPI 214
Query: 290 NFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTS 334
N N + ++ S P + + ++ + +
Sbjct: 215 NHQSNLVVPNTVKNTDGSL--VTPEIISDDGDYEKPNVKWHLPEF 257
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-20
Identities = 69/288 (23%), Positives = 111/288 (38%), Gaps = 48/288 (16%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
F +G G +GSVYKA + G VA+K + + E +M+ +++K
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVK 88
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
L+ + +EY GS+ + N L + I+ LEYL+
Sbjct: 89 YYGSYFKNT--DLW--IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH-- 142
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFG----ITKLLTREDQFVTQTQTPATIGYMALE 882
IH D+K N+LL A L+DFG +T + + + + TP +MA E
Sbjct: 143 -FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG---TPF---WMAPE 195
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM---KIVD 939
E + D+++ G+ +E GK P +I H + +I
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPPYADI--------HPMRAIFMIPTNPPPTFRK 247
Query: 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
L S FV + C V+SPE+R A + LL+
Sbjct: 248 PELWSDNFTDFVKQ-------------CLVKSPEQRATATQ----LLQ 278
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 1e-20
Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510
L LS N L A L L+L EL + L + L+LS N L
Sbjct: 35 ILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL--QVDGTLPVLGTLDLSHNQLQS- 91
Query: 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGDLMSL 569
LPL L L +D S N + + A+ G+ +LQ L+L+ N L+ ++P L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKL 150
Query: 570 KSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
+ L+L+NNNL+ +P L L L L L N L IPK G FG+
Sbjct: 151 EKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLYT-IPK-GFFGSHL 196
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 3e-20
Identities = 52/214 (24%), Positives = 78/214 (36%), Gaps = 34/214 (15%)
Query: 390 SIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAK 448
++P ++ + T L +L N L TL +L L +L + + L
Sbjct: 24 ALPPDLPKDTTIL---HLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVDG-TLPV 78
Query: 449 VYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT 508
+ LDLS+N+L S+P L +L L ++ N L S+ L ++ L L N L
Sbjct: 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 509 GPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGDLM 567
L G L K L+ L L N L +P L
Sbjct: 138 T---LPPGLLTPTPK---------------------LEKLSLANNNLT-ELPAGLLNGLE 172
Query: 568 SLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFN 601
+L +L L N+L +IP L L N
Sbjct: 173 NLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 4e-19
Identities = 55/246 (22%), Positives = 78/246 (31%), Gaps = 46/246 (18%)
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
P S + +N K +P L IL LS N + T+L
Sbjct: 2 PICEVSKVASHLEVNCDKRNL-TALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLT 58
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237
+L L L LQ+ G L L L L N+L
Sbjct: 59 QLNLDRAELTK------LQVD---------------------GTLPVLGTLDLSHNQLQ- 90
Query: 238 VIPAEIFNMSTIQGVGLQNNSLSGSLQSIP---YVRLPNLEELYLWGNHFSGSIPNFIFN 294
+P + + + + N L S+P L L+ELYL GN ++P +
Sbjct: 91 SLPLLGQTLPALTVLDVSFN----RLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLT 145
Query: 295 A-SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353
KL +L L N+ + L NL L L N L ++ L F
Sbjct: 146 PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHL------LPF 199
Query: 354 IDLSSN 359
L N
Sbjct: 200 AFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 2e-16
Identities = 51/275 (18%), Positives = 77/275 (28%), Gaps = 86/275 (31%)
Query: 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-N 99
+ + + +TA +P L L L N + +
Sbjct: 8 KVASHLEVNCDKRNLTA-----------LPPDL--PKDTTILHLSENLLY-TFSLATLMP 53
Query: 100 IHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSY 159
L L+ +L + L +L L L LS+
Sbjct: 54 YTRLTQLNLDRAEL---------TKLQVDGTL------------------PVLGTLDLSH 86
Query: 160 NDFAGGIPKEIGNLTKLEELYLSFNGLQ----GAYDHGFLQIFVKNIFVQFSHNFSKCEI 215
N +P L L L +SFN L GA
Sbjct: 87 NQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRG----------------------- 122
Query: 216 PNEIGNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIP---YVRL 271
L L+ L L N+L +P + ++ + L NN +L +P L
Sbjct: 123 ------LGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANN----NLTELPAGLLNGL 171
Query: 272 PNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKN 306
NL+ L L N +IP F + L L N
Sbjct: 172 ENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 5e-15
Identities = 42/221 (19%), Positives = 71/221 (32%), Gaps = 42/221 (19%)
Query: 215 IPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIP-YVRLPN 273
+P ++ ++ +L L N L A + + + + L L + LP
Sbjct: 25 LPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL----TKLQVDGTLPV 78
Query: 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
L L L N S+P L+ L++ N + L L+ L L N L
Sbjct: 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 334 SLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE 393
+ L L+ LE + L++N++ +P
Sbjct: 138 T--LPPGLLTPTPK---LEKLSLANNNLT---------------------------ELPA 165
Query: 394 EI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDN 433
+ L NL L N+L +IP L + N
Sbjct: 166 GLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 8/183 (4%)
Query: 6 SNITTDLDALHALKTHITNDPTNFFAKNWNSSI---SFCNWTGVTCDVHSHRVTALNISH 62
++ D LH + + + T + D + L++SH
Sbjct: 27 PDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSH 86
Query: 63 LSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNI 121
L ++P L +L L + N+ + S+P + L+ L N+L +P +
Sbjct: 87 NQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK-TLPPGL 143
Query: 122 CSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYL 181
+ P E L+L+ N L+ L L L N IPK L +L
Sbjct: 144 LTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFL 202
Query: 182 SFN 184
N
Sbjct: 203 HGN 205
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 2e-20
Identities = 62/298 (20%), Positives = 115/298 (38%), Gaps = 70/298 (23%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRA-FKSFDVECEV-MKSIRHRNIIKIISC 770
+GRG +G V K R + G +AVK K ++ ++ M+++ +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTF--- 71
Query: 771 CSIGDFKALFK----ALALEYMPHGSLEKYLYSSNYILDIFQRLN------IMIDVASAL 820
+ ALF+ + +E M SL+K+ ++D Q + I + + AL
Sbjct: 72 -----YGALFREGDVWICMELMD-TSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA 880
E+L+ S VIH D+KPSNVL+ + DFGI+ L + YMA
Sbjct: 123 EHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP---YMA 177
Query: 881 LE----YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
E ++ S D+++ G+ ++E + P W + + +
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIELAILRFP----------YDSWGTPFQQLK--Q 225
Query: 937 IVDG-------SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+V+ S E + F ++ C ++ ++R E L++
Sbjct: 226 VVEEPSPQLPADKFSAEFVDFTSQ-------------CLKKNSKERPTYPE----LMQ 266
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 2e-20
Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 48/219 (21%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV-----ECEVMKSIRHRNIIK 766
+G+G FG+VY AR Q+ +A+KV + + K E E+ +RH NI++
Sbjct: 21 PLGKGKFGNVYLAREKQNKFIMALKVLFKS--QLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLN------IMIDVASAL 820
+ + D K ++ L LE+ P G L K L R + M ++A AL
Sbjct: 79 MYN--YFHDRKRIY--LMLEFAPRGELYKELQKH-------GRFDEQRSATFMEELADAL 127
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ--TPATIGY 878
Y + VIH D+KP N+L+G ++DFG +T T Y
Sbjct: 128 HYCH---ERKVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRTMCGTLD---Y 178
Query: 879 MALE------YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+ E + +V D++ GV+ E G P
Sbjct: 179 LPPEMIEGKTHD--EKV----DLWCAGVLCYEFLVGMPP 211
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 4e-20
Identities = 47/306 (15%), Positives = 106/306 (34%), Gaps = 62/306 (20%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDV-----------------ECEVM 756
+ +G F + +D A+K + + + F E +++
Sbjct: 39 LNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97
Query: 757 KSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL------ 810
I++ + I ++ ++ + EYM + S+ K+ + +
Sbjct: 98 TDIKNEYCLTCEG--IITNYDEVY--IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVI 153
Query: 811 -NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869
I+ V ++ Y++ + H D+KPSN+L+ N LSDFG ++ + +
Sbjct: 154 KCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESE-YMVDKKIKGS 210
Query: 870 TQTPATIGYMALEYGSEGRVSTNG---DVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV 926
T +M E+ S S NG D+++ G+ L F P + +
Sbjct: 211 RGTYE---FMPPEFFS-NESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN--- 263
Query: 927 NDWLLISIMKIVDGSL----LSREDIQFVAKEQCMSFVFNMAMECT-------VESPEKR 975
I ++ + + ++ ++ E ++P +R
Sbjct: 264 ---------NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAER 314
Query: 976 INAKEI 981
I +++
Sbjct: 315 ITSEDA 320
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 7e-20
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 41/223 (18%)
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
+IP+ I + +L+LQ N S F L L+ L LN+N L + L L
Sbjct: 30 AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT--LPAGIFKELK 85
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFY 405
N LE + ++ N + ++P + L NL
Sbjct: 86 N---LETLWVTDNKLQ---------------------------ALPIGVFDQLVNLAELR 115
Query: 406 LGGNNLNGSIPITL-GKLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSI 463
L N L S+P + L KL L N+L+ S+P V +L + +L L NN+L +
Sbjct: 116 LDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLK-RV 172
Query: 464 PA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSN 505
P F L L+ L L +N+L V F +L+ + L L N
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 5e-18
Identities = 62/216 (28%), Positives = 92/216 (42%), Gaps = 34/216 (15%)
Query: 390 SIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVC-RLA 447
+IP I + L L N L+ +L KL++LY DNKL+ ++P + L
Sbjct: 30 AIPSNIPADTKKL---DLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELK 85
Query: 448 KVYQLDLSNNKLSGSIPAC-FGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNS 506
+ L +++NKL ++P F L +L L L N+L S+ P F +L + YL+L N
Sbjct: 86 NLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144
Query: 507 LTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGD 565
L LP + L+ L L N L+ +P+ F
Sbjct: 145 LQS-LP-----------------------KGVFDKLTSLKELRLYNNQLK-RVPEGAFDK 179
Query: 566 LMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFN 601
L LK+L L NN L + + L LK L L N
Sbjct: 180 LTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 1e-17
Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510
+LDL +NKLS F L LR L L N+L ++ F LK++ L ++ N L
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA- 99
Query: 511 LPLEI-GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLMS 568
LP+ + L L ++ N + P + L +L L YN LQ S+P F L S
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTS 158
Query: 569 LKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNKLEGEIPKG 610
LK L L NN L +P +KL+ LK L L N+L+ +P+G
Sbjct: 159 LKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLK-RVPEG 199
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 4e-16
Identities = 67/296 (22%), Positives = 101/296 (34%), Gaps = 100/296 (33%)
Query: 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-N 99
CN + D S ++TA IPS + + + L L SN+ S S+P F
Sbjct: 14 CNNNKNSVDCSSKKLTA-----------IPSNI--PADTKKLDLQSNKLS-SLPSKAFHR 59
Query: 100 IHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSY 159
+ L+LL DN+L +P I L E+L ++ N ++ L
Sbjct: 60 LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDN----------------KLQALPI 102
Query: 160 NDFAGGIPKEIGNLTKLEELYLSFNGLQ----GAYDHGFLQIFVKNIFVQFSHNFSKCEI 215
F L L EL L N L+ +D
Sbjct: 103 GVFDQ--------LVNLAELRLDRNQLKSLPPRVFD------------------------ 130
Query: 216 PNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLE 275
+L L L+LG N+L +P +F+ +L +L+
Sbjct: 131 -----SLTKLTYLSLGYNELQ-SLPKGVFD------------------------KLTSLK 160
Query: 276 ELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNN 330
EL L+ N +P F ++L L+L N F +L LK L L N
Sbjct: 161 ELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 90.3 bits (224), Expect = 2e-19
Identities = 46/270 (17%), Positives = 80/270 (29%), Gaps = 41/270 (15%)
Query: 312 IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371
IPS RN L L + + S LE I++S N + ++
Sbjct: 24 IPSDL--PRNAIELRFVLTKLRVIQK-----GAFSGFGDLEKIEISQNDVLEVIEADVFS 76
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLY 429
NL L + N I E NL NL + + +P + + +L
Sbjct: 77 NL-PKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLD 134
Query: 430 FPDNKLEGSIPDEV-CRL-AKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVI 487
DN +I L + L L+ N + + F +N L +
Sbjct: 135 IQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELP 194
Query: 488 PSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQF 547
F + L++S + LP + +K L+
Sbjct: 195 NDVFHGASGPVILDISRTRIH-SLP-----------------------SYGLENLKKLRA 230
Query: 548 LFLEYNILQGSIPDSFGDLMSLKSLNLSNN 577
+P + L++L +L+
Sbjct: 231 RSTYNLK---KLP-TLEKLVALMEASLTYP 256
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 8e-18
Identities = 54/290 (18%), Positives = 89/290 (30%), Gaps = 49/290 (16%)
Query: 78 SLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNM 137
S + ++ + IP + L F +L I S E + +S+N
Sbjct: 10 SNRVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQND 65
Query: 138 FHGGIPS-ALSNCTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGFL 195
I + SN L +R+ + I E NL L+ L +S G++ D +
Sbjct: 66 VLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI 125
Query: 196 QIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFN--MSTIQGVG 253
+ +L + N + I F +
Sbjct: 126 -------------------------HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILW 160
Query: 254 LQNNSLSGSLQSIPYV--RLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSG 310
L N + Q I L+EL L N+ +PN +F AS L++ +
Sbjct: 161 LNKNGI----QEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS 216
Query: 311 FIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNS 360
NL+ L+ N L L +L L L+ S
Sbjct: 217 LPSYGLENLKKLRARSTYN---------LKKLPTLEKLVALMEASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 1e-16
Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 10/213 (4%)
Query: 404 FYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEV-CRLAKVYQLDLSNNKLSGS 462
F + + IP L + L F KL I + ++++S N +
Sbjct: 14 FLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEV 69
Query: 463 IPA-CFGDLASLRNLSLA-SNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKV 520
I A F +L L + + +N L+ + P F NL ++ YL +S+ + + +
Sbjct: 70 IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 129
Query: 521 LVKIDFSMNNFSGVIP-NAIGGI-KDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNN 578
V +D N I N+ G+ + L+L N +Q +F + NNN
Sbjct: 130 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNN 189
Query: 579 LSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGG 611
L S L++S ++ +P G
Sbjct: 190 LEELPNDVFHGASGPVILDISRTRIH-SLPSYG 221
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 1e-15
Identities = 59/366 (16%), Positives = 100/366 (27%), Gaps = 80/366 (21%)
Query: 41 CNWTGVTCDVHSHRVTAL------NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQF 89
C+ + +VT + N L I L+ + + N
Sbjct: 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66
Query: 90 SGSIPFSIF----NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSA 145
I +F +H +++ N L I NLP + L +S
Sbjct: 67 LEVIEADVFSNLPKLHEIRIE--KANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVH 123
Query: 146 LSNCTYLRILRLSYNDFAGGIPKEI--GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIF 203
+ +L + N I + G + L+L+ NG+Q
Sbjct: 124 KIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ---------------- 167
Query: 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL 263
EI N N L+ L L N + +P ++F+
Sbjct: 168 ----------EIHNSAFNGTQLDELNLSDNNNLEELPNDVFH------------------ 199
Query: 264 QSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGNLRNL 322
L + S+P++ N KL +P+ L L
Sbjct: 200 ------GASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNLK---KLPT-LEKLVAL 248
Query: 323 KRLGLNNNH----LTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLK 378
L + ++S L + N L G S + N S +
Sbjct: 249 MEASLTYPSHCCAFANWRRQISELHPICNKSILRQEVDYMTQARGQRSSLAEDNESSYSR 308
Query: 379 IFDMSD 384
FDM+
Sbjct: 309 GFDMTY 314
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 2e-19
Identities = 69/321 (21%), Positives = 118/321 (36%), Gaps = 56/321 (17%)
Query: 687 MPQEATWRRFSYLELCQATD---GFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC 742
M ++ R ++L D F L+G G +G VYK R ++ G A+KV +
Sbjct: 2 MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT- 60
Query: 743 GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKAL--ALEYMPHGSL-EKYLY 798
G + E ++K HRNI + + L +E+ GS+ +
Sbjct: 61 GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN 120
Query: 799 SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858
+ L I ++ L +L+ VIH D+K NVLL +N L DFG++
Sbjct: 121 TKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177
Query: 859 LLTREDQFVTQTQTPATIG---YMALEYGSEGRVSTNG-----DVYNFGVMLMETFTGKK 910
L R T + IG +MA E + D+++ G+ +E G
Sbjct: 178 QLDR-----TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
Query: 911 PTNEIFNEGMTLKHWVNDWLLISIMK----IVDGSLLSREDIQFVAKEQCMSFVFNMAME 966
P ++ M L I + + S++ F+
Sbjct: 233 PLCDM--HPM--------RALFLIPRNPAPRLKSKKWSKKFQSFIES------------- 269
Query: 967 CTVESPEKRINAKEIVTRLLK 987
C V++ +R ++ L+K
Sbjct: 270 CLVKNHSQRPATEQ----LMK 286
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 3e-19
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 24/250 (9%)
Query: 672 ARNRKRGRQQPNDADMPQEATWRRFSYLELCQATD---GFSENNLIGRGGFGSVYKAR-I 727
N + + + EL D FS+ IG G FG+VY AR +
Sbjct: 17 TENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDV 76
Query: 728 QDGMEVAVKVFN---QQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784
++ VA+K + +Q ++ E ++ +RH N I+ C + L
Sbjct: 77 RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAW--LV 132
Query: 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844
+EY GS L L + + L YL+ S +IH D+K N+LL
Sbjct: 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLS 188
Query: 845 DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE---YGSEGRVSTNGDVYNFGVM 901
+ + L DFG ++ + FV TP +MA E EG+ DV++ G+
Sbjct: 189 EPGLVKLGDFGSASIMAPANSFVG---TPY---WMAPEVILAMDEGQYDGKVDVWSLGIT 242
Query: 902 LMETFTGKKP 911
+E K P
Sbjct: 243 CIELAERKPP 252
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 4e-19
Identities = 67/309 (21%), Positives = 111/309 (35%), Gaps = 63/309 (20%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRN 763
D + +IG G V A +VA+K N ++C + E + M H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSL-------EKYLYSSNYILDIFQRLNIMIDV 816
I+ S L+ L ++ + GS+ + +LD I+ +V
Sbjct: 75 IVSYY--TSFVVKDELW--LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATI 876
LEYL+ IH D+K N+LLG++ ++DFG++ L +
Sbjct: 131 LEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 877 G---YMALEYGSEGRVSTNGDVYN-------FGVMLMETFTGKKPTNE------IFNEGM 920
G +MA E V Y+ FG+ +E TG P ++ + +
Sbjct: 188 GTPCWMAPE------VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM---L 238
Query: 921 TLKHWVND--WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA 978
TL+ ND L + + + ++ C + PEKR A
Sbjct: 239 TLQ---NDPPSLETGVQDKEMLKKYGKSFRKMISL-------------CLQKDPEKRPTA 282
Query: 979 KEIVTRLLK 987
E LL+
Sbjct: 283 AE----LLR 287
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 5e-19
Identities = 28/187 (14%), Positives = 65/187 (34%), Gaps = 17/187 (9%)
Query: 297 KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDL 356
L ++S + T + +L + L N ++T LT + ++ + +
Sbjct: 24 AYLNGLLGQSSTA---NITEAQMNSLTYITLANINVTDLT-------GIEYAHNIKDLTI 73
Query: 357 SSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP 416
++ + LS +L+ + +V+ + LT+L + + + SI
Sbjct: 74 NNIHATNY---NPISGLS-NLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSIL 129
Query: 417 ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNL 476
+ L K+ + N I + L ++ L++ + + D L L
Sbjct: 130 TKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQL 186
Query: 477 SLASNEL 483
S +
Sbjct: 187 YAFSQTI 193
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 3e-18
Identities = 28/217 (12%), Positives = 64/217 (29%), Gaps = 41/217 (18%)
Query: 318 NLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSL 377
+ L + ++T + L +I L++ ++ +
Sbjct: 21 TFKAYLNGLLGQSSTANITE--------AQMNSLTYITLANINVTDL------------- 59
Query: 378 KIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG 437
I N+ + + P + L L+ L +
Sbjct: 60 ---------------TGIEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTS 102
Query: 438 SIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDI 497
+ L + LD+S++ SI L + ++ L+ N I+ I L ++
Sbjct: 103 DKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPEL 161
Query: 498 LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGV 534
LN+ + + +E + L ++ G
Sbjct: 162 KSLNIQFDGVHDYRGIE--DFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 9e-18
Identities = 33/166 (19%), Positives = 63/166 (37%), Gaps = 10/166 (6%)
Query: 438 SIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDI 497
+IPD L + + A + SL ++LA+ + + +I
Sbjct: 16 NIPDST--FKAYLNGLLGQSSTANITEA---QMNSLTYITLANINVTDLTG--IEYAHNI 68
Query: 498 LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG 557
L +++ T P+ L L ++ + + + G+ L L + ++
Sbjct: 69 KDLTINNIHATNYNPIS--GLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDD 126
Query: 558 SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603
SI L + S++LS N I L+ L LK LN+ F+ +
Sbjct: 127 SILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGV 171
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 1e-17
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 34/210 (16%)
Query: 397 NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSN 456
+ LG ++ IT ++ L + + + + + + L ++N
Sbjct: 21 TFKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVT-DL-TGIEYAHNIKDLTINN 75
Query: 457 NKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG 516
+ P L++L L + ++ S L + L++S ++ + +I
Sbjct: 76 IHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN 133
Query: 517 NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSN 576
L + ID S N I D+ L L LKSLN+
Sbjct: 134 TLPKVNSIDLSYNG----------AITDIMPL---------------KTLPELKSLNIQF 168
Query: 577 NNLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606
+ + +E L L + G+
Sbjct: 169 DGVHDYRG--IEDFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 3e-12
Identities = 24/196 (12%), Positives = 58/196 (29%), Gaps = 39/196 (19%)
Query: 218 EIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277
+ +L + L + + E I+ + + N + + I L NLE L
Sbjct: 39 TEAQMNSLTYITLANINVTDLTGIE--YAHNIKDLTINNIHAT-NYNPISG--LSNLERL 93
Query: 278 YLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTL 337
+ G + + + L+ L++ ++ I + L + + L+ N
Sbjct: 94 RIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA----- 148
Query: 338 ELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGN 397
++ + L L+ +++ + + I +
Sbjct: 149 -ITDIMPLKTLPELKSLNIQFDGVHDY----------------------------RGIED 179
Query: 398 LTNLIGFYLGGNNLNG 413
L Y + G
Sbjct: 180 FPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 3e-12
Identities = 36/231 (15%), Positives = 64/231 (27%), Gaps = 58/231 (25%)
Query: 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
A L S T ++SL + L + + H +K L+ + +
Sbjct: 23 KAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGIE--YAHNIKDLTINNIHATN 80
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
P S L E L + LS T L +L +S++ I +I L K
Sbjct: 81 YNP---ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPK 137
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235
+ + LS+N + L L+ L + + +
Sbjct: 138 VNSIDLSYN--------------------------GAITDIMPLKTLPELKSLNIQFDGV 171
Query: 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG 286
+++ P L +LY + G
Sbjct: 172 HDYRG-------------IED--------------FPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 7e-11
Identities = 22/215 (10%), Positives = 54/215 (25%), Gaps = 61/215 (28%)
Query: 123 SNLPFFESLNLSKNMFHGGIP--SALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELY 180
+ + + L+ + + + ++ L ++ I L+ LE L
Sbjct: 41 AQMNSLTYITLANI----NVTDLTGIEYAHNIKDLTINNIHATN--YNPISGLSNLERLR 94
Query: 181 LSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIP 240
+ + + + L +L +L + + I
Sbjct: 95 IMGKDVTS-------------------------DKIPNLSGLTSLTLLDISHSAHDDSIL 129
Query: 241 AEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSR 300
+I LP + + L N I + +L
Sbjct: 130 TKINT-------------------------LPKVNSIDLSYNGAITDIMP-LKTLPELKS 163
Query: 301 LELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335
L +Q + + + L +L + +
Sbjct: 164 LNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 2e-09
Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 9/136 (6%)
Query: 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGV 534
L +++ IP + K L L +S + + L I + N + +
Sbjct: 5 QTGLKASQDNVNIPDS--TFKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVTDL 59
Query: 535 IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLK 594
I +++ L + P L +L+ L + +++ +L L+ L
Sbjct: 60 TG--IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115
Query: 595 DLNLSFNKLEGEIPKG 610
L++S + + I
Sbjct: 116 LLDISHSAHDDSILTK 131
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 6e-19
Identities = 52/308 (16%), Positives = 104/308 (33%), Gaps = 77/308 (25%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCG--RAFKSFDVECEVMKSI-RHRN 763
F E IG G FGSV+K DG A+K + ++ E + +H +
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIF---QRLNIMIDVASAL 820
+++ S + D + + EY GSL + + I+ F + ++++ V L
Sbjct: 73 VVRYFSAWAEDDH--ML--IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDN-------------------MVAHLSDFGITKLLT 861
Y+ +S ++H D+KPSN+ + ++ + D G ++
Sbjct: 129 RYI---HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 185
Query: 862 REDQFVTQTQTPATIGYMALE--YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG 919
+ ++A E + D++ + ++ + G
Sbjct: 186 SPQ---VEEGDS---RFLANEVLQENYTH-LPKADIFALALTVVCAAGAEPL----PRNG 234
Query: 920 MTLKHWVNDWLLISIMKIVDGSL------LSREDIQFVAKEQCMSFVFNMAMECTVESPE 973
+ W +I G L LS+E + + PE
Sbjct: 235 -------DQW-----HEIRQGRLPRIPQVLSQEFTELLKV-------------MIHPDPE 269
Query: 974 KRINAKEI 981
+R +A +
Sbjct: 270 RRPSAMAL 277
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 6e-19
Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 51/226 (22%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFN--------------------QQCGRAFKSFDV 751
IG+G +G V A D A+KV + G +
Sbjct: 20 EIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGP 79
Query: 752 ------ECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYL----YSSN 801
E ++K + H N++K++ + L+ + E + G + + S +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLY--MVFELVNQGPVMEVPTLKPLSED 137
Query: 802 YILDIFQRLNIMIDVASALEYL-YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860
FQ D+ +EYL Y +IH D+KPSN+L+G++ ++DFG++
Sbjct: 138 QARFYFQ------DLIKGIEYLHYQK----IIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 861 TREDQFVTQTQ-TPATIGYMALEYGSEGRVSTNG---DVYNFGVML 902
D ++ T TPA +MA E SE R +G DV+ GV L
Sbjct: 188 KGSDALLSNTVGTPA---FMAPESLSETRKIFSGKALDVWAMGVTL 230
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 1e-18
Identities = 73/294 (24%), Positives = 115/294 (39%), Gaps = 58/294 (19%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRA-FKSFDVECEV-MKSIRHRNIIKIISC 770
IGRG +GSV K G +AVK K ++ +V M+S I++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF--- 86
Query: 771 CSIGDFKALFKA----LALEYMPHGSLEKYLYSSNYILDIFQRLN------IMIDVASAL 820
+ ALF+ + +E M S +K+ + + I + AL
Sbjct: 87 -----YGALFREGDCWICMELMS-TSFDKFY--KYVYSVLDDVIPEEILGKITLATVKAL 138
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA 880
+L +IH D+KPSN+LL + L DFGI+ L + +T+ YMA
Sbjct: 139 NHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS---IAKTRDAGCRPYMA 193
Query: 881 LE----YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936
E S DV++ G+ L E TG+ P W + + ++ +
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFP----------YPKWNSVFDQLT--Q 241
Query: 937 IVDG---SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
+V G L + E+ +F ++FV C + KR KE LLK
Sbjct: 242 VVKGDPPQLSNSEEREF--SPSFINFV----NLCLTKDESKRPKYKE----LLK 285
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 2e-18
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRNII 765
F++ IG+G FG V+K + VA+K+ + ++ + E V+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
K L+ + +EY+ GS L LD Q I+ ++ L+YL+
Sbjct: 84 KYYGSYLKDT--KLW--IIMEYLGGGSALD-LLEPG-PLDETQIATILREILKGLDYLH- 136
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFG----ITKLLTREDQFVTQTQTPATIGYMAL 881
S IH D+K +NVLL ++ L+DFG +T + + FV TP +MA
Sbjct: 137 --SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG---TPF---WMAP 188
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
E + + D+++ G+ +E G+ P
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPP 218
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 2e-18
Identities = 54/287 (18%), Positives = 113/287 (39%), Gaps = 32/287 (11%)
Query: 342 LSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNL 401
+ S +L S+ +++ + +S+ ++ ++ S+ + I L N+
Sbjct: 17 IFSDDAFAETIKDNLKKKSVTDAVTQNEL----NSIDQIIANNSDIK-SV-QGIQYLPNV 70
Query: 402 IGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSG 461
+L GN L P L L+ L L+ +NK++ + + L K+ L L +N +S
Sbjct: 71 TKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK-DL-SSLKDLKKLKSLSLEHNGIS- 125
Query: 462 SIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVL 521
I L L +L L +N++ + + L + L+L N ++ +PL L L
Sbjct: 126 DING-LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLA--GLTKL 180
Query: 522 VKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSL--------- 572
+ S N+ S + A+ G+K+L L L + +L+ ++
Sbjct: 181 QNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT 238
Query: 573 --NLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
+S++ V + +++ F + + G + F
Sbjct: 239 PEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQ---PVTIGKAKARFH 282
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 1e-17
Identities = 61/315 (19%), Positives = 106/315 (33%), Gaps = 51/315 (16%)
Query: 221 NLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLW 280
L + + +++I + N+ + S+Q I Y LPN+ +L+L
Sbjct: 22 AFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQGIQY--LPNVTKLFLN 76
Query: 281 GNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340
GN + I + N L L L +N S+ +L+ LK L L +N ++ +
Sbjct: 77 GNKLT-DIKP-LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLSLEHNGISDI----- 127
Query: 341 FLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTN 400
+ L + LE + L +N I I + LT
Sbjct: 128 --NGLVHLPQLESLYLGNNKITDI----------------------------TVLSRLTK 157
Query: 401 LIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460
L L N ++ I L L KLQ LY N + + + L + L+L + +
Sbjct: 158 LDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DL-RALAGLKNLDVLELFSQECL 213
Query: 461 GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKV 520
+L + L++ P + D N+ + L
Sbjct: 214 NKPINHQSNLVVPNTVKNTDGSLVT--PEIISDDGDYEKPNVKWH-LPEFTNEVSFIFYQ 270
Query: 521 LVKIDFSMNNFSGVI 535
V I + F G +
Sbjct: 271 PVTIGKAKARFHGRV 285
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 1e-15
Identities = 45/292 (15%), Positives = 80/292 (27%), Gaps = 73/292 (25%)
Query: 144 SALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIF 203
+ L + L ++++ + + ++
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK---------------- 59
Query: 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL 263
+ I L N+ L L NKL + P + N+ + + L N + L
Sbjct: 60 ----------SVQG-IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK-DL 105
Query: 264 QSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLK 323
S+ L L+ L L N S I + + +L L L N + + L L
Sbjct: 106 SSLK--DLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKITDI--TVLSRLTKLD 159
Query: 324 RLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMS 383
L L +N ++ + L+ L+ + LS N I +
Sbjct: 160 TLSLEDNQISD-------IVPLAGLTKLQNLYLSKNHISDL------------------- 193
Query: 384 DCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKL 435
+ L NL L L + D L
Sbjct: 194 ---------RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL 236
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 18/203 (8%)
Query: 406 LGGNNLNGSIPIT----LGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSG 461
LG + PI + + ++ L + Q+ +N+ +
Sbjct: 3 LGSETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK- 59
Query: 462 SIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVL 521
S+ L ++ L L N+L + P NLK++ +L L N + L+ +LK L
Sbjct: 60 SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLK--DLKKL 114
Query: 522 VKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSG 581
+ N S + + + L+ L+L N + + L L +L+L +N +S
Sbjct: 115 KSLSLEHNGISDING--LVHLPQLESLYLGNN--KITDITVLSRLTKLDTLSLEDNQIS- 169
Query: 582 SIPVSLEKLSYLKDLNLSFNKLE 604
I L L+ L++L LS N +
Sbjct: 170 DIV-PLAGLTKLQNLYLSKNHIS 191
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 5e-12
Identities = 54/287 (18%), Positives = 108/287 (37%), Gaps = 46/287 (16%)
Query: 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114
N+ S++ + L+S+ + +++ S+ I + + L N+L+
Sbjct: 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLT 81
Query: 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT 174
P NL L L +N S+L + L+ L L +N + + +L
Sbjct: 82 DIKPLANLKNL---GWLFLDENKVK--DLSSLKDLKKLKSLSLEHNGIS--DINGLVHLP 134
Query: 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK 234
+LE LYL N + +I + L L+ L+L N+
Sbjct: 135 QLESLYLGNNKIT--------------------------DITV-LSRLTKLDTLSLEDNQ 167
Query: 235 LVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294
+ ++P + ++ +Q + L N +S L+++ L NL+ L L+ N N
Sbjct: 168 ISDIVP--LAGLTKLQNLYLSKNHIS-DLRALAG--LKNLDVLELFSQECLNKPINHQSN 222
Query: 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSF 341
+ ++ S P + + ++ + + L T E+SF
Sbjct: 223 LVVPNTVKNTDGSLVT--PEIISDDGDYEKPNVKWH-LPEFTNEVSF 266
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 3e-18
Identities = 47/240 (19%), Positives = 85/240 (35%), Gaps = 29/240 (12%)
Query: 676 KRGRQQPNDADMPQEATWRRFSYLELCQATDGFSEN----NLIGRGGFGSVYKAR-IQDG 730
K + ND D E W+++ + + +G G FG V++ G
Sbjct: 17 KYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATG 76
Query: 731 MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPH 790
K N + E +M + H +I + + D + L LE++
Sbjct: 77 RVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD--AFEDKYEMV--LILEFLSG 132
Query: 791 GSL------EKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844
G L E Y S + +N M L+++ + ++H D+KP N++
Sbjct: 133 GELFDRIAAEDYKMSEAEV------INYMRQACEGLKHM---HEHSIVHLDIKPENIMCE 183
Query: 845 DNMVAHL--SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVML 902
+ + DFG+ L ++ T T + A E V D++ GV+
Sbjct: 184 TKKASSVKIIDFGLATKLNPDEIVKVTTATA---EFAAPEIVDREPVGFYTDMWAIGVLG 240
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 86.9 bits (215), Expect = 3e-18
Identities = 52/312 (16%), Positives = 96/312 (30%), Gaps = 49/312 (15%)
Query: 714 IGRG--GFGSVYKAR-IQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIKII 768
IG+G +V AR G V V+ N E V K H NI+
Sbjct: 33 IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYR 92
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYL-YSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ + L+ + +M +GS + + ++ I+ V AL+Y++
Sbjct: 93 ATFIADN--ELW--VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH--- 145
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED--QFVTQTQTPATIG---YMALE 882
+H +K S++L+ + +LS + Q V ++ +++ E
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPE 205
Query: 883 YGSEGRVSTNG--DVYNFGVMLMETFTGKKP------------------------TNEIF 916
+ + D+Y+ G+ E G P +
Sbjct: 206 VLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA 265
Query: 917 NEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVF-NMAMECTVESPEKR 975
E +S S D + S F + +C +P+ R
Sbjct: 266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDAR 325
Query: 976 INAKEIVTRLLK 987
+A LL
Sbjct: 326 PSAST----LLN 333
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 5e-18
Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 36/208 (17%)
Query: 695 RFSYLELCQATDGFSEN----NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSF 749
R + L +T GF EN ++GRG V + E AVK+ + G +F +
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE 61
Query: 750 DV---------ECEVMKSI-RHRNIIKIISCCSIGDFKALFKALALEYMPHGSL-----E 794
+V E ++++ + H NII++ F L + M G L E
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYE--TNTFFF--LVFDLMKKGELFDYLTE 117
Query: 795 KYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854
K S I + + + L+ ++H DLKP N+LL D+M L+DF
Sbjct: 118 KVTLSEKETRKIMR------ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDF 168
Query: 855 GITKLLTREDQFVTQTQTPATIGYMALE 882
G + L ++ TP Y+A E
Sbjct: 169 GFSCQLDPGEKLREVCGTP---SYLAPE 193
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 5e-18
Identities = 33/195 (16%), Positives = 76/195 (38%), Gaps = 11/195 (5%)
Query: 425 LQVLYFPDNKLEGSIPDEV-CRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNE 482
Q L + L +IP L + ++ +S + + + F +L+ + ++ + +
Sbjct: 33 TQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTR 91
Query: 483 LISVIPS-TFWNLKDILYLNLSSNSLTG-PLPLEIGNLKVLVKIDFSMNNFSGVIP-NAI 539
++ I L + +L + + L P ++ + + ++ + N + IP NA
Sbjct: 92 NLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAF 151
Query: 540 GGI-KDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPV-SLEKL-SYLKDL 596
G+ + L L N S+ + L ++ L+ N I + + S L
Sbjct: 152 QGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210
Query: 597 NLSFNKLEGEIPKGG 611
++S + +P G
Sbjct: 211 DVSQTSVT-ALPSKG 224
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 1e-17
Identities = 47/247 (19%), Positives = 89/247 (36%), Gaps = 38/247 (15%)
Query: 262 SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPS-TFGNL 319
+Q IP + P+ + L L H +IP+ F N +SR+ + + + S +F NL
Sbjct: 22 DIQRIPSL-PPSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNL 79
Query: 320 RNLKRLGL-NNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLK 378
+ + + N +LT + + L L L+F+ + + + V +
Sbjct: 80 SKVTHIEIRNTRNLTYIDPDA--LKELPL---LKFLGIFNTGLKMFPDLTKVYST-DIFF 133
Query: 379 IFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG 437
I +++D SIP L N L +N
Sbjct: 134 ILEITDNPYMTSIPVNAFQGLCNE-----------------------TLTLKLYNNGFT- 169
Query: 438 SIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLAS-LRNLSLASNELISVIPSTFWNLK 495
S+ K+ + L+ NK I FG + S L ++ + ++ +LK
Sbjct: 170 SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLK 229
Query: 496 DILYLNL 502
+++ N
Sbjct: 230 ELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 3e-17
Identities = 38/235 (16%), Positives = 79/235 (33%), Gaps = 32/235 (13%)
Query: 247 STIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA-SKLSRLELQK 305
+ Q + L L ++ S + LPN+ +Y+ + + + F SK++ +E++
Sbjct: 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRN 89
Query: 306 NSFSGFIPS-TFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGI 364
+I L LK LG+ N L +L+ + S ++++ N
Sbjct: 90 TRNLTYIDPDALKELPLLKFLGIFNTGLKMFP-DLTKVYSTDI---FFILEITDNPYMTS 145
Query: 365 LSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQK 424
+ + L + + + + S+ N T L YL N I
Sbjct: 146 IPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVID--KDAFGG 202
Query: 425 LQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSL 478
+ + LD+S ++ ++P+ L L +
Sbjct: 203 VY------SGPS--------------LLDVSQTSVT-ALPSKGLEHLKELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 1e-15
Identities = 46/256 (17%), Positives = 87/256 (33%), Gaps = 61/256 (23%)
Query: 102 TLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPS-ALSNCTYLRILRLSYN 160
+ + L + L IP++ SNLP + +S ++ + S + N + + + +
Sbjct: 32 STQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNT 90
Query: 161 DFAGGIPKEI-GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE- 218
I + L L+ L + GL+ P+
Sbjct: 91 RNLTYIDPDALKELPLLKFLGIFNTGLK--------------------------MFPDLT 124
Query: 219 -IGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277
+ + +L + N + IP F GL N L
Sbjct: 125 KVYSTDIFFILEITDNPYMTSIPVNAFQ-------GLCN----------------ETLTL 161
Query: 278 YLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPS-TFGNLRN-LKRLGLNNNHLTSL 335
L+ N F+ S+ + FN +KL + L KN + I FG + + L ++ +T+L
Sbjct: 162 KLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL 220
Query: 336 TLE----LSFLSSLSN 347
+ L L + +
Sbjct: 221 PSKGLEHLKELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 7e-15
Identities = 40/239 (16%), Positives = 77/239 (32%), Gaps = 20/239 (8%)
Query: 348 CKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYL 406
C E ++ I + +L S + + + ++ +IP NL N+ Y+
Sbjct: 10 CHQEEDFRVTCKDIQ------RIPSLPPSTQTLKLIETHLR-TIPSHAFSNLPNISRIYV 62
Query: 407 GGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPDEVCR-LAKVYQLDLSNNKLSGSIP 464
+ + + L K+ + + + I + + L + L + N L P
Sbjct: 63 SIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFP 121
Query: 465 AC--FGDLASLRNLSLASNELISVIPS-TFWNLKDIL-YLNLSSNSLTGPLPLEIGNLKV 520
L + N ++ IP F L + L L +N T + N
Sbjct: 122 DLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNGTK 180
Query: 521 LVKIDFSMNNFSGVIPNAI--GGIKDLQFLFLEYNILQGSIP-DSFGDLMSLKSLNLSN 576
L + + N + VI G L + + ++P L L + N
Sbjct: 181 LDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKGLEHLKELIARNTWT 238
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 9e-13
Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 48/254 (18%)
Query: 47 TCDVHSHRVTAL-----NISHLSLSG----TIPSR-LGNLSSLQSLFLHSNQFSGSIPFS 96
V + + + L L TIPS NL ++ +++ + +
Sbjct: 15 DFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESH 74
Query: 97 IF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIP--SALSNCTYLR 153
F N+ + + + + I + LP + L + P + + +
Sbjct: 75 SFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFF 133
Query: 154 ILRLSYNDFAGGIPKEI-GNLTK-LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFS 211
IL ++ N + IP L L L NG
Sbjct: 134 ILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT------------------------ 169
Query: 212 KCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFN--MSTIQGVGLQNNSLSGSLQSIPYV 269
+ N L+ + L NK + VI + F S + + S++ ++P
Sbjct: 170 --SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT----ALPSK 223
Query: 270 RLPNLEELYLWGNH 283
L +L+EL
Sbjct: 224 GLEHLKELIARNTW 237
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 12/175 (6%)
Query: 442 EVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLN 501
C + ++ + IP S + L L L ++ F NL +I +
Sbjct: 6 PPCECHQEEDFRVTCKDIQ-RIP---SLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIY 61
Query: 502 LSSNSLTGPLPLEI-GNLKVLVKIDFSMNNFSGVIP-NAIGGIKDLQFLFLEYNILQGSI 559
+S + L NL + I+ I +A+ + L+FL + L+
Sbjct: 62 VSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MF 120
Query: 560 PD--SFGDLMSLKSLNLSNNNLSGSIPV-SLEKL-SYLKDLNLSFNKLEGEIPKG 610
PD L +++N SIPV + + L + L L N +
Sbjct: 121 PDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 9e-18
Identities = 64/294 (21%), Positives = 106/294 (36%), Gaps = 63/294 (21%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEV-MKSIRHRNIIKIISC 770
+G G G V+K R + G +AVK K ++ +V +KS I++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC--- 89
Query: 771 CSIGDFKALFKA----LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
F +A+E M EK + + + + AL YL
Sbjct: 90 -----FGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE---- 882
+ VIH D+KPSN+LL + L DFGI+ L + + ++ YMA E
Sbjct: 144 HG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD---KAKDRSAGCAAYMAPERIDP 198
Query: 883 -YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG- 940
++ DV++ G+ L+E TG+ P K+ D+ + + K++
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFP----------YKNCKTDFEV--LTKVLQEE 246
Query: 941 -------SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987
S + FV C + KR + LL+
Sbjct: 247 PPLLPGHMGFSGDFQSFVKD-------------CLTKDHRKRPKYNK----LLE 283
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 1e-17
Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 47/210 (22%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+G+G F V + G+E A K+ N + R F+ + E + + ++H NI+++
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 771 CSIGDFKALFKALALEYMPHGSL-----EKYLYS----SNYILDIFQRLNIMIDVASALE 821
+ + L + + G L + YS S+ I I ++
Sbjct: 97 IQ--EESFHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----------ESIA 142
Query: 822 YLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY 878
Y + S ++H +LKP N+LL L+DFG+ + + + TP GY
Sbjct: 143 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---GY 196
Query: 879 MALE------YGSEGRVSTNGDVYNFGVML 902
++ E Y D++ GV+L
Sbjct: 197 LSPEVLKKDPYSKP------VDIWACGVIL 220
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 1e-17
Identities = 25/205 (12%), Positives = 51/205 (24%), Gaps = 47/205 (22%)
Query: 713 LIGRGGFGSVYKARIQD---GMEVAVKVFNQQCGRA--FKS-FDVECEVMKSIRHRNIIK 766
G ++A D +VA+ + Q + I + +
Sbjct: 38 FHGGVPPLQFWQAL--DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
++ + E++ GSL++ +S + M +A+A + +
Sbjct: 96 VLDVVHTRA--GGL--VVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH-- 146
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
V PS V + + L+ P
Sbjct: 147 -RAGVALSIDHPSRVRVSIDGDVVLAYPATM-----------PDANPQD----------- 183
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKP 911
D+ G L + P
Sbjct: 184 -------DIRGIGASLYALLVNRWP 201
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 1e-17
Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 47/210 (22%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+G+G F V + G+E A K+ N + R F+ + E + + ++H NI+++
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 771 CSIGDFKALFKALALEYMPHGSL-----EKYLYS----SNYILDIFQRLNIMIDVASALE 821
+ + L + + G L + YS S+ I I ++
Sbjct: 74 IQ--EESFHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----------ESIA 119
Query: 822 YLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY 878
Y + S ++H +LKP N+LL L+DFG+ + + + TP GY
Sbjct: 120 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---GY 173
Query: 879 MALE------YGSEGRVSTNGDVYNFGVML 902
++ E Y D++ GV+L
Sbjct: 174 LSPEVLKKDPYSKP------VDIWACGVIL 197
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 2e-17
Identities = 50/226 (22%), Positives = 87/226 (38%), Gaps = 43/226 (19%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+G G +G V R +E A+K+ + E V+K + H NI+K+
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 771 CSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
D + + L +E G L + ++ I + V S + YL
Sbjct: 105 FE--DKRNYY--LVMECYKGGELFDEIIHRMKFNEVDAAVIIK------QVLSGVTYL-- 152
Query: 826 GYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
+ ++H DLKP N+LL + + + DFG++ + + + + T Y+A E
Sbjct: 153 -HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTA---YYIAPE 208
Query: 883 -----YGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFNE 918
Y + DV++ GV+L G P EI +
Sbjct: 209 VLRKKYDEK------CDVWSIGVILFILLAGYPPFGGQTDQEILRK 248
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 3e-17
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 52/212 (24%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
++G G F V+ + G A+K + S + E V+K I+H NI+ +
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL------------NIMIDVASA 819
+ L ++ + G L F R+ ++ V SA
Sbjct: 76 E--STTHYY--LVMQLVSGGEL-------------FDRILERGVYTEKDASLVIQQVLSA 118
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATI 876
++YL + ++H DLKP N+L +N ++DFG++K+ + T TP
Sbjct: 119 VKYL---HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME-QNGIMSTACGTP--- 171
Query: 877 GYMALE------YGSEGRVSTNGDVYNFGVML 902
GY+A E Y D ++ GV+
Sbjct: 172 GYVAPEVLAQKPYSKA------VDCWSIGVIT 197
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 3e-17
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 38/205 (18%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+G+G FG V K + E AVKV N + + E E++K + H NI+K+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 771 CSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
D + + + E G L ++ +S + I + V S + Y+
Sbjct: 90 LE--DSSSFY--IVGELYTGGELFDEIIKRKRFSEHDAARIIK------QVFSGITYM-- 137
Query: 826 GYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
+ ++H DLKP N+LL + + DFG++ + + + T Y+A E
Sbjct: 138 -HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA---YYIAPE 193
Query: 883 -----YGSEGRVSTNGDVYNFGVML 902
Y + DV++ GV+L
Sbjct: 194 VLRGTYDEK------CDVWSAGVIL 212
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 5e-17
Identities = 56/215 (26%), Positives = 84/215 (39%), Gaps = 49/215 (22%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN------QQCGRAFKSFDV--ECEVMKSIRHRNI 764
+G G G V A + +VA+K+ + A + +V E E++K + H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASA 819
IKI F A + LE M G L F + A
Sbjct: 78 IKI-----KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY------QMLLA 126
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATI 876
++YL + +IH DLKP NVLL ++ + ++DFG +K+L T TP
Sbjct: 127 VQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP--- 180
Query: 877 GYMALE---------YGSEGRVSTNGDVYNFGVML 902
Y+A E Y V D ++ GV+L
Sbjct: 181 TYLAPEVLVSVGTAGYNRA--V----DCWSLGVIL 209
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 5e-17
Identities = 57/237 (24%), Positives = 89/237 (37%), Gaps = 49/237 (20%)
Query: 672 ARNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSEN----NLIGRGGFGSVYKAR- 726
A +K QP + + L A F + ++IGRG V +
Sbjct: 56 AEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVH 115
Query: 727 IQDGMEVAVKVFN--------QQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFK 777
G E AVK+ +Q ++ E +++ + H +II +I
Sbjct: 116 RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE--SSS 173
Query: 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRL------------NIMIDVASALEYLYF 825
+F L + M G L F L +IM + A+ +L+
Sbjct: 174 FMF--LVFDLMRKGEL-------------FDYLTEKVALSEKETRSIMRSLLEAVSFLH- 217
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
+ ++H DLKP N+LL DNM LSDFG + L ++ TP GY+A E
Sbjct: 218 --ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTP---GYLAPE 269
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 6e-17
Identities = 54/203 (26%), Positives = 79/203 (38%), Gaps = 36/203 (17%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCS 772
IGRG +G V A + A K + F E E+MKS+ H NII++
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 773 IGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
D ++ L +E G L K ++ + I + DV SA+ Y +
Sbjct: 77 --DNTDIY--LVMELCTGGELFERVVHKRVFRESDAARIMK------DVLSAVAYC---H 123
Query: 828 STPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE-- 882
V H DLKP N L + L DFG+ T+ TP Y++ +
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP---YYVSPQVL 180
Query: 883 ---YGSEGRVSTNGDVYNFGVML 902
YG E D ++ GVM+
Sbjct: 181 EGLYGPE------CDEWSAGVMM 197
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 8e-17
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV----ECEVMKSIRHRNIIKI 767
L+G G +G V + + AVK+ ++ R + + E ++++ +RH+N+I++
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ + + ++ + +EY G E + Q + LEYL+
Sbjct: 72 VDVLYNEEKQKMY--MVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH--- 126
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT--REDQFVTQTQ-TPATIGYMALE-- 882
S ++H D+KP N+LL +S G+ + L D +Q +PA + E
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA---FQPPEIA 183
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
G + D+++ GV L TG P
Sbjct: 184 NGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 55/218 (25%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKV-----FNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
IG+G F V + + G + AVK+ F G + + E + ++H +I+++
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 768 ISCCSIGDFKALFKALALEYMPHGSL---------EKYLYS----SNYILDIFQRLNIMI 814
+ S L+ + E+M L ++YS S+Y+ I
Sbjct: 92 LETYS--SDGMLY--MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL------- 140
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQ-FVTQT 870
AL Y + +IH D+KP VLL ++ L FG+ L +
Sbjct: 141 ---EALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV 194
Query: 871 QTPATIGYMALE------YGSEGRVSTNGDVYNFGVML 902
TP +MA E YG DV+ GV+L
Sbjct: 195 GTP---HFMAPEVVKREPYGKP------VDVWGCGVIL 223
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 1e-16
Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 48/211 (22%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV--ECEVMKSIRHRNIIKIISC 770
+G+G F V + + G E A + N + A + E + + ++H NI+++
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 771 CSIGDFKALFKALALEYMPHGSL-----EKYLYS----SNYILDIFQRLNIMIDVASALE 821
S + + L + + G L + YS S+ I I A+
Sbjct: 79 IS--EEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQIL----------EAVL 124
Query: 822 YLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQ-FVTQTQTPATIG 877
+ + V+H +LKP N+LL L+DFG+ + E Q + TP G
Sbjct: 125 HCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP---G 178
Query: 878 YMALE------YGSEGRVSTNGDVYNFGVML 902
Y++ E YG D++ GV+L
Sbjct: 179 YLSPEVLRKDPYGKP------VDLWACGVIL 203
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 2e-16
Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 37/209 (17%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN--------QQCGRAFKSFDVECEVMKSIRHRNI 764
+G G G V A + +VA+++ + + + + E E++K + H I
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASA 819
IKI + D + + + LE M G L F + A
Sbjct: 203 IKIKNFF---DAEDYY--IVLELMEGGELFDKVVGNKRLKEATCKLYFY------QMLLA 251
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATI 876
++YL + +IH DLKP NVLL ++ + ++DFG +K+L T TP
Sbjct: 252 VQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP--- 305
Query: 877 GYMA---LEYGSEGRVSTNGDVYNFGVML 902
Y+A L + D ++ GV+L
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 2e-16
Identities = 44/274 (16%), Positives = 84/274 (30%), Gaps = 70/274 (25%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKV----------------------------- 737
F +GRGGFG V++A+ D A+K
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 738 --------------------FNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777
+ + + S +
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127
Query: 778 ALFKA-----LALEYMPHGSLEKYLYSSNYI--LDIFQRLNIMIDVASALEYLYFGYSTP 830
+ ++ +L+ ++ + + L+I I +A A+E+L+ S
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKG 184
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA----------TIGYMA 880
++H DLKPSN+ + V + DFG+ + ++++ T T YM+
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244
Query: 881 LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914
E S D+++ G++L E E
Sbjct: 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME 278
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 2e-16
Identities = 55/291 (18%), Positives = 101/291 (34%), Gaps = 40/291 (13%)
Query: 327 LNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCN 386
+ + +L S+ + S LS ++ F+ + N
Sbjct: 4 QRPTPINQV-------FPDPGLANAVKQNLGKQSVTDL---VSQKELSG-VQNFNGDNSN 52
Query: 387 VSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRL 446
+ S+ + TNL +L N ++ + L L KL+ L N+L+ L
Sbjct: 53 IQ-SL-AGMQFFTNLKELHLSHNQIS-DLS-PLKDLTKLEELSVNRNRLKNLNGIPSACL 108
Query: 447 AKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNS 506
++ L L NN+L + L +L LS+ +N+L S+ L + L+L N
Sbjct: 109 SR---LFLDNNELR-DTDS-LIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNE 161
Query: 507 LTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDL 566
+T L LK + ID + + + + ++ D G
Sbjct: 162 ITNTGGLT--RLKKVNWIDLTGQK-----------CVNEPVKYQPELYITNTVKDPDGRW 208
Query: 567 MSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
+S +SN V E Y +++ F++ I G + F
Sbjct: 209 ISPY--YISNGGSYVDGCVLWELPVYTDEVSYKFSEY---INVGETEAIFD 254
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 4e-14
Identities = 49/270 (18%), Positives = 93/270 (34%), Gaps = 35/270 (12%)
Query: 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNN 330
L N + L + + + S + ++ NLK L L++N
Sbjct: 18 LANAVKQNLGKQSVT-DLVS-QKELSGVQNFNGDNSNIQSLAG--MQFFTNLKELHLSHN 73
Query: 331 HLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH-SLKIFDMSDCNVSG 389
++ L S L + LE + ++ N + K++ + L + + +
Sbjct: 74 QISDL-------SPLKDLTKLEELSVNRNRL------KNLNGIPSACLSRLFLDNNELRD 120
Query: 390 SIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKV 449
+ + +L NL + N L SI + LG L KL+VL N++ + + RL KV
Sbjct: 121 --TDSLIHLKNLEILSIRNNKLK-SIVM-LGFLSKLEVLDLHGNEIT-NT-GGLTRLKKV 174
Query: 450 YQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG 509
+DL+ K +L + IS P N + +
Sbjct: 175 NWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWIS--PYYISNGGSYVDGCVLWE---- 228
Query: 510 PLPLEIGNL----KVLVKIDFSMNNFSGVI 535
LP+ + + + + F G +
Sbjct: 229 -LPVYTDEVSYKFSEYINVGETEAIFDGTV 257
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 5e-14
Identities = 45/217 (20%), Positives = 82/217 (37%), Gaps = 23/217 (10%)
Query: 219 IGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELY 278
L N LG + ++ + +S +Q N+++ SL + + NL+EL+
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVSQK--ELSGVQNFNGDNSNIQ-SLAGMQF--FTNLKELH 69
Query: 279 LWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLE 338
L N S + + + +KL L + +N L RL L+NN L
Sbjct: 70 LSHNQIS-DLSP-LKDLTKLEELSVNRNRLKNL---NGIPSACLSRLFLDNNELRDT--- 121
Query: 339 LSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNL 398
SL + K LE + + +N + I +G LS L++ D+ ++ + + L
Sbjct: 122 ----DSLIHLKNLEILSIRNNKLKSI---VMLGFLS-KLEVLDLHGNEIT-NT-GGLTRL 171
Query: 399 TNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKL 435
+ L G +L + PD +
Sbjct: 172 KKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRW 208
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 9e-12
Identities = 34/259 (13%), Positives = 78/259 (30%), Gaps = 49/259 (18%)
Query: 144 SALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIF 203
L L+ ++ + +Q
Sbjct: 13 FPDPGLANAVKQNLGKQSVTD--LVSQKELSGVQNFNGDNSNIQ---------------- 54
Query: 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL 263
+ + NL+ L L N++ + P + +++ ++ + + N L
Sbjct: 55 ----------SLAG-MQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLK--- 98
Query: 264 QSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLK 323
++ + L L+L N + + + L L ++ N G L L+
Sbjct: 99 -NLNGIPSACLSRLFLDNNELR-DTDS-LIHLKNLEILSIRNNKLKSI--VMLGFLSKLE 153
Query: 324 RLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI-DGILSRKSVGNLSHSLKIFDM 382
L L+ N +T+ L+ K + +IDL+ + + + L + + D
Sbjct: 154 VLDLHGNEITN-------TGGLTRLKKVNWIDLTGQKCVNEPVKYQP--ELYITNTVKDP 204
Query: 383 SDCNVSGSIPEEIGNLTNL 401
+S G+ +
Sbjct: 205 DGRWISPYYISNGGSYVDG 223
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 9e-09
Identities = 44/286 (15%), Positives = 86/286 (30%), Gaps = 57/286 (19%)
Query: 82 LFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGG 141
+ P + + G ++ + S + ++ N +
Sbjct: 2 SIQRPTPINQVFPDP--GLANAVKQNLGKQSVTDLVSQKELSGV---QNFNGDNSNIQ-- 54
Query: 142 IPSALSNCTYLRILRLSYN---DFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIF 198
+ + T L+ L LS+N D + + +LTKLEEL ++ N L
Sbjct: 55 SLAGMQFFTNLKELHLSHNQISDLSP-----LKDLTKLEELSVNRNRL------------ 97
Query: 199 VKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNS 258
KN+ L L L N+L + ++ ++ + ++NN
Sbjct: 98 -KNL---------------NGIPSACLSRLFLDNNELRDTDS--LIHLKNLEILSIRNNK 139
Query: 259 LSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGN 318
L S+ + L LE L L GN + + + K++ ++L
Sbjct: 140 LK-SIVML--GFLSKLEVLDLHGNEIT-NTGG-LTRLKKVNWIDLTGQKCVNEPVKYQPE 194
Query: 319 LRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGI 364
L + + S +SN +
Sbjct: 195 LYITNTVKDPDGRWIS-------PYYISNGGSYVDGCVLWELPVYT 233
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 19/135 (14%)
Query: 59 NISHLSLSG---TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG 115
+ + + + + ++L+ L L NQ S P ++ L+ LS N+L
Sbjct: 42 GVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLK--DLTKLEELSVNRNRLK- 98
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYN---DFAGGIPKEIGN 172
+ + L L L N +L + L IL + N +G
Sbjct: 99 NLNGIPSACL---SRLFLDNNELRD--TDSLIHLKNLEILSIRNNKLKSIVM-----LGF 148
Query: 173 LTKLEELYLSFNGLQ 187
L+KLE L L N +
Sbjct: 149 LSKLEVLDLHGNEIT 163
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 3e-16
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 44/227 (19%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQ---QCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
+G+G FG V + G E AVKV ++ + +S E +++K + H NI+K+
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 770 CCSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
D + L E G L + +S I ++ V S + Y+
Sbjct: 94 FFE--DKGYFY--LVGEVYTGGELFDEIISRKRFSEVDAARIIRQ------VLSGITYM- 142
Query: 825 FGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
+ ++H DLKP N+LL + + DFG++ + + T Y+A
Sbjct: 143 --HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA---YYIAP 197
Query: 882 E-----YGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFNE 918
E Y + DV++ GV+L +G P +I +
Sbjct: 198 EVLHGTYDEK------CDVWSTGVILYILLSGCPPFNGANEYDILKK 238
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 3e-16
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 43/226 (19%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+G+G FG V K + E AVKV N + + E E++K + H NI+K+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 771 CSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
D + + + E G L ++ +S + I+ V S + Y+
Sbjct: 90 LE--DSSSFY--IVGELYTGGELFDEIIKRKRFSEHDAAR------IIKQVFSGITYM-- 137
Query: 826 GYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
+ ++H DLKP N+LL + + DFG++ + + + T Y+A E
Sbjct: 138 -HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA---YYIAPE 193
Query: 883 -----YGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFNE 918
Y + DV++ GV+L +G P +I
Sbjct: 194 VLRGTYDEK------CDVWSAGVILYILLSGTPPFYGKNEYDILKR 233
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 4e-16
Identities = 49/216 (22%), Positives = 83/216 (38%), Gaps = 62/216 (28%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEV---MKSIRHRNIIKIIS 769
IG G + + ME AVK+ ++ D E+ ++ +H NII +
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDK------SKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL------------NIMIDVA 817
D K ++ + E M G L ++ ++ +
Sbjct: 84 VYD--DGKYVY--VVTELMKGGEL-------------LDKILRQKFFSEREASAVLFTIT 126
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAHLSDFGITKLLTREDQFVTQTQTP 873
+EYL+ + V+H DLKPSN+L G+ + DFG K L E+ + TP
Sbjct: 127 KTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM---TP 180
Query: 874 A-TIGYMALE------YGSEGRVSTNGDVYNFGVML 902
T ++A E Y + D+++ GV+L
Sbjct: 181 CYTANFVAPEVLERQGYDAA--C----DIWSLGVLL 210
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 81.0 bits (200), Expect = 7e-16
Identities = 45/243 (18%), Positives = 83/243 (34%), Gaps = 29/243 (11%)
Query: 673 RNRKRGRQQPNDADMPQEATWRRFSYLELCQATDGFSE----NNLIGRGGFGSVYKAR-I 727
+ + ++ D W+++ + D + + +G G FG V++
Sbjct: 120 KIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTER 179
Query: 728 QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEY 787
G A K ++ E + M +RH ++ + D + + E+
Sbjct: 180 ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE--DDNEMV--MIYEF 235
Query: 788 MPHGSL------EKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNV 841
M G L E S + + M V L ++ + +H DLKP N+
Sbjct: 236 MSGGELFEKVADEHNKMSEDEA------VEYMRQVCKGLCHM---HENNYVHLDLKPENI 286
Query: 842 LLGDNMVAHL--SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFG 899
+ L DFG+T L + T T + A E V D+++ G
Sbjct: 287 MFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA---EFAAPEVAEGKPVGYYTDMWSVG 343
Query: 900 VML 902
V+
Sbjct: 344 VLS 346
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 1e-15
Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 56/213 (26%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCC 771
+G G F K + AVK+ ++ R + E +K H NI+K+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL------------NIMIDVASA 819
D F L +E + G L F+R+ IM + SA
Sbjct: 76 H--DQLHTF--LVMELLNGGEL-------------FERIKKKKHFSETEASYIMRKLVSA 118
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPA-T 875
+ +++ V+H DLKP N+L DN+ + DFG +L ++Q + TP T
Sbjct: 119 VSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK---TPCFT 172
Query: 876 IGYMALE------YGSEGRVSTNGDVYNFGVML 902
+ Y A E Y D+++ GV+L
Sbjct: 173 LHYAAPELLNQNGYDES------CDLWSLGVIL 199
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 2e-15
Identities = 49/239 (20%), Positives = 92/239 (38%), Gaps = 54/239 (22%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKV-------------FNQQCGRAFKSFDVECEVMK 757
+G G +G V + E A+KV N+ + + E ++K
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 758 SIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNI 812
S+ H NIIK+ D K + L E+ G L ++ + +I ++
Sbjct: 102 SLDHPNIIKLFDVFE--DKKYFY--LVTEFYEGGELFEQIINRHKFDECDAANIMKQ--- 154
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQ 869
+ S + YL + ++H D+KP N+LL + + DFG++ +++ + +
Sbjct: 155 ---ILSGICYL---HKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 870 TQTPATIGYMALE-----YGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFNE 918
T Y+A E Y + DV++ GV++ G P +I +
Sbjct: 209 LGTA---YYIAPEVLKKKYNEK------CDVWSCGVIMYILLCGYPPFGGQNDQDIIKK 258
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 2e-15
Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
S+ ++G G FG V+K G+++A K+ + + + E VM + H N+I+
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 767 IISCCSIGDFKALFKALALEYMPHGSL------EKYLYSSNYILDIFQRLNIMIDVASAL 820
+ + L +EY+ G L E Y + + M + +
Sbjct: 151 LYDAFE--SKNDIV--LVMEYVDGGELFDRIIDESYNLTELDTIL------FMKQICEGI 200
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL--SDFGITKLLTREDQFVTQTQTPATIGY 878
+++ Y ++H DLKP N+L + + DFG+ + ++ TP +
Sbjct: 201 RHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTP---EF 254
Query: 879 MALEYGSEGRVSTNGDVYNFGVML 902
+A E + VS D+++ GV+
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIA 278
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 78.0 bits (192), Expect = 2e-15
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEI--GNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVL 428
+L + D+S N+S + E LTNL L N+LN I + L+ L
Sbjct: 36 SLPSYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYL 93
Query: 429 YFPDNKLEGSIPDEVCR-LAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISV 486
N L ++ + + L + L L NN + + F D+A L+ L L+ N++
Sbjct: 94 DLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQISRF 151
Query: 487 IPSTFWN---LKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNN 530
+ L ++ L+LSSN L ++ L VK ++N
Sbjct: 152 PVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 77.6 bits (191), Expect = 3e-15
Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 41/189 (21%)
Query: 452 LDLSNNKLSGSIPA--CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG 509
LDLS+N LS + A L +L +L L+ N L + F + ++ YL+LSSN L
Sbjct: 44 LDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHT 102
Query: 510 PLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP-DSFGDLMS 568
L ++ L+ L L N + + ++F D+
Sbjct: 103 -LD-----------------------EFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQ 137
Query: 569 LKSLNLSNNNLSGSIP----VSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAE----- 619
L+ L LS N +S P KL L L+LS NKL+ ++P A
Sbjct: 138 LQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK-KLPL-TDLQKLPAWVKNGL 194
Query: 620 SFEGNKLLC 628
N L C
Sbjct: 195 YLHNNPLEC 203
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 8e-14
Identities = 44/179 (24%), Positives = 66/179 (36%), Gaps = 14/179 (7%)
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASK 297
+P + S + L +N+LS RL NL L L NH + I + F
Sbjct: 33 VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPN 89
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357
L L+L N F +L+ L+ L L NNH+ + + + L+ + LS
Sbjct: 90 LRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN-----AFEDMAQLQKLYLS 144
Query: 358 SNSIDGILSR--KSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNL--IGFYLGGNNLN 412
N I K L L + D+S + ++ L G YL N L
Sbjct: 145 QNQISRFPVELIKDGNKLPK-LMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 2e-13
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 320 RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKI 379
L L++N+L+ L E + + L+N L + LS N ++ I S ++ + +L+
Sbjct: 39 SYTALLDLSHNNLSRLRAEWTP-TRLTN---LHSLLLSHNHLNFI-SSEAFVPVP-NLRY 92
Query: 380 FDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEG 437
D+S ++ ++ E + +L L L N++ + + +LQ LY N++
Sbjct: 93 LDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS- 149
Query: 438 SIPDEV----CRLAKVYQLDLSNNKLSGSIPACFGDLASL--RNLSLASN 481
P E+ +L K+ LDLS+NKL L + L L +N
Sbjct: 150 RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 48/228 (21%), Positives = 71/228 (31%), Gaps = 67/228 (29%)
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPS--ALSNCTYLRILRLSYNDFAGGIPKEI-GN 172
+P ++ S L+LS N + + + T L L LS+N I E
Sbjct: 32 NVPQSLPSYT---ALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNF-ISSEAFVP 86
Query: 173 LTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALG 231
+ L L LS N L + + +L+ LEVL L
Sbjct: 87 VPNLRYLDLSSNHLH--------------------------TLDEFLFSDLQALEVLLLY 120
Query: 232 LNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNF 291
N +V V+ F + L++LYL N S P
Sbjct: 121 NNHIV-VVDRNAFE------------------------DMAQLQKLYLSQNQIS-RFPVE 154
Query: 292 IFNA----SKLSRLELQKNSFSGFIPSTFGNLRNLKR--LGLNNNHLT 333
+ KL L+L N + L + L L+NN L
Sbjct: 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 3e-11
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 466 CFGDLASLRNLSLASNELISVIPSTFWNL-KDILYLNLSSNSLTGPLPLEI--GNLKVLV 522
C ++ S L + +P +L L+LS N+L+ L E L L
Sbjct: 18 CASNILSCSKQQLPN------VPQ---SLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLH 67
Query: 523 KIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP-DSFGDLMSLKSLNLSNNNLSG 581
+ S N+ + + A + +L++L L N L ++ F DL +L+ L L NN++
Sbjct: 68 SLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIV- 125
Query: 582 SIPV-SLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSA 618
+ + E ++ L+ L LS N++ P + +
Sbjct: 126 VVDRNAFEDMAQLQKLYLSQNQIS-RFPV-ELIKDGNK 161
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 7e-11
Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 20/170 (11%)
Query: 41 CNWTGVTCDVHSHRVTAL------NISHLSLSG----TIPSR--LGNLSSLQSLFLHSNQ 88
C ++C ++ + + L LS + + L++L SL L N
Sbjct: 18 CASNILSC--SKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNH 75
Query: 89 FSGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALS 147
+ I F + L+ L N L + + S+L E L L N +A
Sbjct: 76 LN-FISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFE 133
Query: 148 NCTYLRILRLSYN---DFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGF 194
+ L+ L LS N F + K+ L KL L LS N L+
Sbjct: 134 DMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDL 183
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 4e-15
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 59/234 (25%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+GRG VY+ + A+KV + K E V+ + H NIIK+
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL------------NIMIDVASA 819
+ L LE + G L F R+ + + + A
Sbjct: 118 E--TPTEIS--LVLELVTGGEL-------------FDRIVEKGYYSERDAADAVKQILEA 160
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATI 876
+ YL+ ++H DLKP N+L + ++DFG++K++ + T TP
Sbjct: 161 VAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP--- 214
Query: 877 GYMALE------YGSEGRVSTNGDVYNFGVML------METFTGKKPTNEIFNE 918
GY A E YG E V D+++ G++ E F ++ +F
Sbjct: 215 GYCAPEILRGCAYGPE--V----DMWSVGIITYILLCGFEPFYDERGDQFMFRR 262
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 4e-15
Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 51/210 (24%)
Query: 704 ATDGFSEN---------NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVEC 753
+TD FS +++G G V + E AVK+ +Q G E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 754 EVMKSIR-HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL-- 810
E++ + HRN++++I + + L E M GS+ +
Sbjct: 62 EMLYQCQGHRNVLELIEFFE--EEDRFY--LVFEKMRGGSI-------------LSHIHK 104
Query: 811 ----------NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGIT 857
++ DVASAL++L+ + + H DLKP N+L + DF +
Sbjct: 105 RRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLG 161
Query: 858 KLLTREDQFVTQT----QTPA-TIGYMALE 882
+ + TP + YMA E
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 5e-15
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEV--MKSIRHRNIIKIISC 770
IG+G F V AR I G EVA+K+ ++ + EV MK + H NI+K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD-----IFQRLNIMIDVASALEYLYF 825
I K L+ L +EY G + YL + + + F+++ SA++Y +
Sbjct: 83 --IETEKTLY--LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------VSAVQYCH- 131
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY-- 883
++H DLK N+LL +M ++DFG + T + P Y A E
Sbjct: 132 --QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP---YAAPELFQ 186
Query: 884 --GSEGRVSTNGDVYNFGVMLMETFTGKKP 911
+G DV++ GV+L +G P
Sbjct: 187 GKKYDGPEV---DVWSLGVILYTLVSGSLP 213
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 6e-15
Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 54/214 (25%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEV---MKSIRHRNIIKII 768
++G G G V + + G + A+K+ S EV ++ +I+ I+
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLY-------DSPKARQEVDHHWQASGGPHIVCIL 88
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD-IFQRLN----------IMIDVA 817
+ +E M G L I +R + IM D+
Sbjct: 89 DVYENMHHGKRCLLIIMECMEGGEL----------FSRIQERGDQAFTEREAAEIMRDIG 138
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
+A+++L+ S + H D+KP N+L + V L+DFG K T ++ T TP
Sbjct: 139 TAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPCYTP- 193
Query: 875 TIGYMALE------YGSEGRVSTNGDVYNFGVML 902
Y+A E Y D+++ GV++
Sbjct: 194 --YYVAPEVLGPEKYDKS------CDMWSLGVIM 219
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 7e-15
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 29/202 (14%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G G FG V+ G+E +K N + + + E EV+KS+ H NIIKI
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIF---QRLNIMIDVASALEYLYFGYS 828
D+ ++ + +E G L + + S+ +M + +AL Y +S
Sbjct: 90 E--DYHNMY--IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF---HS 142
Query: 829 TPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE--- 882
V+H DLKP N+L + + DFG+ +L ++ T YMA E
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTA---LYMAPEVFK 199
Query: 883 --YGSEGRVSTNGDVYNFGVML 902
+ D+++ GV++
Sbjct: 200 RDVTFK------CDIWSAGVVM 215
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-14
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV------ECEVMKSIRHRNII 765
+G G FG V G +VAVK+ N+Q +S DV E + +K RH +II
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD-----IFQRLNIMIDVASAL 820
K+ I F + +EY+ G L Y+ + + +FQ++ SA+
Sbjct: 75 KLYQV--ISTPTDFF--MVMEYVSGGELFDYICKHGRVEEMEARRLFQQI------LSAV 124
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA 880
+Y + V+H DLKP NVLL +M A ++DFG++ +++ + T +P Y A
Sbjct: 125 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN---YAA 178
Query: 881 LE 882
E
Sbjct: 179 PE 180
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 2e-14
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVK-VFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISC 770
IG G FG V++A++ + EVA+K V + R E ++M+ ++H N++ + +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR-------ELQIMRIVKHPNVVDLKAF 100
Query: 771 ----CSIGDFKALFKALALEYMP---HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
D L L LEY+P + + Y + + +L M + +L Y+
Sbjct: 101 FYSNGDKKDEVFLN--LVLEYVPETVYRASRHYAKLKQTMPMLLIKL-YMYQLLRSLAYI 157
Query: 824 YFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFV 867
+S + H D+KP N+LL + V L DFG K+L + V
Sbjct: 158 ---HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV 199
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 2e-14
Identities = 73/504 (14%), Positives = 147/504 (29%), Gaps = 119/504 (23%)
Query: 58 LNISHLSLSGT------IPSRLGNLSSLQSLFLHSNQFS----GSIPFSIFNIHTLKLLS 107
L+I L + L L Q + L + I ++ L L+
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 62
Query: 108 FGDNQLSGEIPTNICSNLPFF----ESLNLSKNMFH----GGIPSALSNCTYLRILRLSY 159
N+L + L + L+L G + S L L+ L LS
Sbjct: 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 122
Query: 160 NDFAGGIPKEIG-----NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214
N + + +LE+L L + L A +
Sbjct: 123 NLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAK------------- 169
Query: 215 IPNEIGNLRNLEVLALGLNKL--VGVIP-AEIF--NMSTIQGVGLQNNSLSG-SLQSIPY 268
+ + L + N + GV + + ++ + L++ ++ + + +
Sbjct: 170 --------PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221
Query: 269 V--RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLG 326
+ +L EL L N ++L L + L+ L
Sbjct: 222 IVASKASLRELALGSNKLGDV------GMAELCPGLLHPS-------------SRLRTLW 262
Query: 327 LNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI--DGILS-RKSVGNLSHSLKIFDMS 383
+ +T+ L + L+ + L+ N + +G +++ L+ +
Sbjct: 263 IWECGITAKGCG-DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321
Query: 384 DCNVSG----SIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSI 439
C+ + + L+ + N L + L Q L P + L
Sbjct: 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC-----QGLGQPGSVLR--- 373
Query: 440 PDEVCRLAKVYQLDLSNNKLSGSIPACFGDLAS-------LRNLSLASN--------ELI 484
L L++ +S + LA+ LR L L++N +L+
Sbjct: 374 -----------VLWLADCDVS---DSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLV 419
Query: 485 SVIPSTFWNLKDILYLNLSSNSLT 508
+ L+ L L +
Sbjct: 420 ESVRQPGCLLE---QLVLYDIYWS 440
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 1e-13
Identities = 80/438 (18%), Positives = 145/438 (33%), Gaps = 85/438 (19%)
Query: 223 RNLEVLALGLNKL-VGVIPAEIFNMSTIQGVGLQNNSLS-GSLQSIPYV--RLPNLEELY 278
+++ L + +L + + Q V L + L+ + I P L EL
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 62
Query: 279 LWGNHFSGSIPNFIFNA-----SKLSRLELQKNSFS----GFIPSTFGNLRNLKRLGLNN 329
L N + + K+ +L LQ + G + ST L L+ L L++
Sbjct: 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 122
Query: 330 NHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL---SHSLKIFDMSDCN 386
N L L+L L LE + L S+ S + + ++ K +S+ +
Sbjct: 123 NLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSL-SAASCEPLASVLRAKPDFKELTVSNND 181
Query: 387 VSGSIPEEIG-----NLTNLIGFYLGGNNLN----GSIPITLGKLQKLQVLYFPDNKLEG 437
++ + + + L L + + + L+ L NKL
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241
Query: 438 S--------IPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLA-------SLRNLSLASNE 482
+ RL L + ++ GDL SL+ LSLA NE
Sbjct: 242 VGMAELCPGLLHPSSRLRT---LWIWECGIT---AKGCGDLCRVLRAKESLKELSLAGNE 295
Query: 483 --------LISVIPSTFWNLKDILYLNLSSNSLTG----PLPLEIGNLKVLVKIDFSMNN 530
L + L+ L + S S T + + L+++ S N
Sbjct: 296 LGDEGARLLCETLLEPGCQLE---SLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNR 352
Query: 531 FSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLS----GSIPVS 586
G+++L + L+ L L++ ++S S+ +
Sbjct: 353 LED------AGVRELCQGLGQPG-------------SVLRVLWLADCDVSDSSCSSLAAT 393
Query: 587 LEKLSYLKDLNLSFNKLE 604
L L++L+LS N L
Sbjct: 394 LLANHSLRELDLSNNCLG 411
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 9e-06
Identities = 48/269 (17%), Positives = 91/269 (33%), Gaps = 62/269 (23%)
Query: 373 LSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPD 432
+S ++ D+ +S + L LQ+ QV+ D
Sbjct: 1 MSLDIQSLDIQCEELSDA-----------------------RWAELLPLLQQCQVVRLDD 37
Query: 433 NKLEGSIPDEVCR-LAKVYQ-------LDLSNNKLSGSIPACFGDL-----ASLRNLSLA 479
+ + C+ ++ + L+L +N+L C ++ LSL
Sbjct: 38 C----GLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQ 93
Query: 480 SNEL----ISVIPSTFWNLKDILYLNLSSNSLT--GPLPLEIGNLKV---LVKIDFSMNN 530
+ L V+ ST L + L+LS N L G L G L L K+ +
Sbjct: 94 NCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCS 153
Query: 531 FS----GVIPNAIGGIKDLQFLFLEYNILQGS----IPDSFGDLM-SLKSLNLSNNNLS- 580
S + + + D + L + N + + + D L++L L + ++
Sbjct: 154 LSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTS 213
Query: 581 ---GSIPVSLEKLSYLKDLNLSFNKLEGE 606
+ + + L++L L NKL
Sbjct: 214 DNCRDLCGIVASKASLRELALGSNKLGDV 242
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 2e-14
Identities = 43/205 (20%), Positives = 77/205 (37%), Gaps = 32/205 (15%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDV-----ECEVMKSIRHRNIIK 766
+G G F V K R G+E A K +Q + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 767 IISCCSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASALE 821
+ + + L LE + G L +K S + + +
Sbjct: 80 LHDVYE--NRTDVV--LILELVSGGELFDFLAQKESLSEEEATS------FIKQILDGVN 129
Query: 822 YLYFGYSTPVIHCDLKPSNVLL----GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
YL ++ + H DLKP N++L L DFG+ + +F TP
Sbjct: 130 YL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---E 183
Query: 878 YMALEYGSEGRVSTNGDVYNFGVML 902
++A E + + D+++ GV+
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-14
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVK-VFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G FG VY+A++ D G VA+K V + R E ++M+ + H NI+++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRY 114
Query: 770 C--CSIGDFKALFKALALEYMP---HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
S ++ L L+Y+P + Y + + I+ +L M + +L Y++
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIH 173
Query: 825 FGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFV 867
S + H D+KP N+LL D V L DFG K L R + V
Sbjct: 174 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 2e-14
Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 53/213 (24%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEV---MKSIRHRNIIKIIS 769
+G G G V + + + A+K+ EV ++ + +I++I+
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRASQCPHIVRIVD 122
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD-IFQRLN----------IMIDVAS 818
+ +E + G L I R + IM +
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGEL----------FSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875
A++YL+ S + H D+KP N+L N + L+DFG K T + T TP
Sbjct: 173 AIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP-- 227
Query: 876 IGYMALE------YGSEGRVSTNGDVYNFGVML 902
Y+A E Y D+++ GV++
Sbjct: 228 -YYVAPEVLGPEKYDKS------CDMWSLGVIM 253
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 3e-14
Identities = 55/261 (21%), Positives = 87/261 (33%), Gaps = 63/261 (24%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV-----ECEVMKSIRHRNIIKI 767
IG+G +G V A Q A+K+ N+ R DV E +MK + H NI ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL----------------- 810
D + + L +E G L L +
Sbjct: 94 YEVYE--DEQYIC--LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 811 ----------------------NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV 848
NIM + SAL YL ++ + H D+KP N L N
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYL---HNQGICHRDIKPENFLFSTNKS 206
Query: 849 AHL--SDFGITKLLTREDQFVTQT-QTPA-TIGYMALE--YGSEGRVSTNGDVYNFGVML 902
+ DFG++K + + T A T ++A E + D ++ GV+L
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 903 METFTGKKP-----TNEIFNE 918
G P + ++
Sbjct: 267 HLLLMGAVPFPGVNDADTISQ 287
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 4e-14
Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 32/205 (15%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDV-----ECEVMKSIRHRNIIK 766
+G G F V K R G E A K ++ + + E +++ IRH NII
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 767 IISCCSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASALE 821
+ + + L LE + G L EK + + + + +
Sbjct: 73 LHDIFE--NKTDVV--LILELVSGGELFDFLAEKESLTEDEATQ------FLKQILDGVH 122
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAH----LSDFGITKLLTREDQFVTQTQTPATIG 877
YL +S + H DLKP N++L D V + L DFGI + ++F TP
Sbjct: 123 YL---HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP---E 176
Query: 878 YMALEYGSEGRVSTNGDVYNFGVML 902
++A E + + D+++ GV+
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVIT 201
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 5e-14
Identities = 54/286 (18%), Positives = 99/286 (34%), Gaps = 57/286 (19%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+G G +G V A VAVK+ + ++ ++ E + K + H N++K
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-----LDIFQRLNIMIDVASALEYLYF 825
+ + L LEY G L + + F +L + + YL+
Sbjct: 74 --RREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFG---ITKLLTREDQFVTQTQTPATIGYMALE 882
+ H D+KP N+LL + +SDFG + + RE T Y+A E
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP---YVAPE 177
Query: 883 ------Y-GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935
+ DV++ G++L G+ P ++ + W
Sbjct: 178 LLKRREFHAEPV------DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-----KKT 226
Query: 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + ++ + + VE+P RI +I
Sbjct: 227 YLNPWKKIDSA---------PLALLHKI----LVENPSARITIPDI 259
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 5e-14
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 45/191 (23%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV----------ECEVMKSIRHR 762
+G G FG V+ A + EV VK ++ + + + E ++ + H
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKE--KVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILD-----------IFQRLN 811
NIIK++ + L +E G L+ L+ +I IF++L
Sbjct: 90 NIIKVLDI--FENQGFFQ--LVMEKHGSG-LD--LF--AFIDRHPRLDEPLASYIFRQL- 139
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
SA+ YL +IH D+K N+++ ++ L DFG L R F T
Sbjct: 140 -----VSAVGYL---RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCG 191
Query: 872 TPATIGYMALE 882
T Y A E
Sbjct: 192 TIE---YCAPE 199
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 6e-14
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 32/205 (15%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDV-----ECEVMKSIRHRNIIK 766
+G G F V K R G++ A K ++ + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 767 IISCCSIGDFKALFKALALEYMPHGSL-----EKYLYSSNYILDIFQRLNIMIDVASALE 821
+ + + L LE + G L EK + + + + + +
Sbjct: 79 LHEVYE--NKTDVI--LILELVAGGELFDFLAEKESLTEEEATE------FLKQILNGVY 128
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAH----LSDFGITKLLTREDQFVTQTQTPATIG 877
YL +S + H DLKP N++L D V + DFG+ + ++F TP
Sbjct: 129 YL---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---E 182
Query: 878 YMALEYGSEGRVSTNGDVYNFGVML 902
++A E + + D+++ GV+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVIT 207
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 7e-14
Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 40/209 (19%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFN------QQCGRAFKSFDVECEVMKSIRHRNIIK 766
+G G F V K R G+E A K + G + + E +++ + H NII
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 767 IISCCSIGDFKALFKALALEYMPHGSL-----EKYLYS----SNYILDIFQRLNIMIDVA 817
+ + + L LE + G L +K S +++I I
Sbjct: 80 LHDVYE--NRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQIL---------- 125
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAHLSDFGITKLLTREDQFVTQTQTP 873
+ YL ++ + H DLKP N++L L DFG+ + +F TP
Sbjct: 126 DGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 874 ATIGYMALEYGSEGRVSTNGDVYNFGVML 902
++A E + + D+++ GV+
Sbjct: 183 ---EFVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 9e-14
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511
+ L N + P F LR + L++N++ + P F L+ + L L N +T L
Sbjct: 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE-L 95
Query: 512 PLEI-GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLK 570
P + L L + + N + + +A + +L L L N LQ +F L +++
Sbjct: 96 PKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQ 155
Query: 571 SLNLSNN 577
+++L+ N
Sbjct: 156 TMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 2e-11
Identities = 41/176 (23%), Positives = 59/176 (33%), Gaps = 35/176 (19%)
Query: 260 SGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPSTFGN 318
L IP + E+ L N IP F KL R++L N S P F
Sbjct: 20 GKGLTEIPTNLPETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQG 78
Query: 319 LRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLK 378
LR+L L L N +T L L L + L+ + L++N I
Sbjct: 79 LRSLNSLVLYGNKITELPKSL--FEGLFS---LQLLLLNANKI----------------- 116
Query: 379 IFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDN 433
+ + +L NL L N L T L+ +Q ++ N
Sbjct: 117 ----------NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 5e-11
Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 37/173 (21%)
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
IP + + L++N+ P F + L+R+ L+NN ++ L L
Sbjct: 25 EIPTNLPETIT--EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS--ELAPDAFQGLR 80
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYL 406
+ L + L N I + +F+ L +L L
Sbjct: 81 S---LNSLVLYGNKITELPKS-----------LFE---------------GLFSLQLLLL 111
Query: 407 GGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPDEV-CRLAKVYQLDLSNN 457
N +N + + L L +L DNKL+ +I L + + L+ N
Sbjct: 112 NANKIN-CLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 523 KIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGS 582
+I N + P A K L+ + L N + PD+F L SL SL L N ++
Sbjct: 36 EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-E 94
Query: 583 IPVSL-EKLSYLKDLNLSFNKLEGEIPKG 610
+P SL E L L+ L L+ NK+ +
Sbjct: 95 LPKSLFEGLFSLQLLLLNANKIN-CLRVD 122
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 8e-09
Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 20/149 (13%)
Query: 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNI 100
C+ V C L+ IP+ L ++ + L N IP F+
Sbjct: 11 CSNNIVDC------------RGKGLT-EIPTNL--PETITEIRLEQNTIK-VIPPGAFSP 54
Query: 101 HT-LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSY 159
+ L+ + +NQ+S E+ + L SL L N S L++L L+
Sbjct: 55 YKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNA 113
Query: 160 NDFAGGIPKEI-GNLTKLEELYLSFNGLQ 187
N + + +L L L L N LQ
Sbjct: 114 NKINC-LRVDAFQDLHNLNLLSLYDNKLQ 141
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 41/175 (23%)
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLT 174
EIPTN+ + + L +N P A S LR + LS N + + + L
Sbjct: 25 EIPTNLPETI---TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE-LAPDAFQGLR 80
Query: 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLN 233
L L L N + E+P + L +L++L L N
Sbjct: 81 SLNSLVLYGNKIT--------------------------ELPKSLFEGLFSLQLLLLNAN 114
Query: 234 KLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIP---YVRLPNLEELYLWGNHF 284
K+ + + F ++ + + L +N L Q+I + L ++ ++L N F
Sbjct: 115 KINC-LRVDAFQDLHNLNLLSLYDNKL----QTIAKGTFSPLRAIQTMHLAQNPF 164
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 544 DLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPV-SLEKLSYLKDLNLSFNK 602
+ + LE N ++ P +F L+ ++LSNN +S + + + L L L L NK
Sbjct: 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNK 91
Query: 603 LEGEIPKG 610
+ E+PK
Sbjct: 92 IT-ELPKS 98
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 38/204 (18%), Positives = 73/204 (35%), Gaps = 38/204 (18%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV--ECEVMKSIRHRNIIKIISC 770
+GRG FG V++ K + V E ++ RHRNI+ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVK---VKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 771 CSIGDFKALFKALALEYMPHGSL------EKYLYS----SNYILDIFQRLNIMIDVASAL 820
+ L + E++ + + + +Y+ + AL
Sbjct: 70 FE--SMEELV--MIFEFISGLDIFERINTSAFELNEREIVSYVHQVC----------EAL 115
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL--SDFGITKLLTREDQFVTQTQTPATIGY 878
++L+ + H D++P N++ + + +FG + L D F P Y
Sbjct: 116 QFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP---EY 169
Query: 879 MALEYGSEGRVSTNGDVYNFGVML 902
A E VST D+++ G ++
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLV 193
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 1e-13
Identities = 59/234 (25%), Positives = 89/234 (38%), Gaps = 45/234 (19%)
Query: 384 DCNVSG--SIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLE--GS 438
+ P++ L ++ T +L + + ++ ++
Sbjct: 4 TVSTPIKQIFPDDAFAETIKA---NLKKKSVT-DAV-TQNELNSIDQIIANNSDIKSVQG 58
Query: 439 IPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498
I L V L L NKL I A +L +L L L N+L S+ F L ++
Sbjct: 59 IQ----YLPNVRYLALGGNKLH-DISA-LKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112
Query: 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGS 558
L L N L L G L L +L L +N LQ S
Sbjct: 113 ELVLVENQLQS---LPDGVFDKLTN---------------------LTYLNLAHNQLQ-S 147
Query: 559 IPDS-FGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNKLEGEIPKG 610
+P F L +L L+LS N L S+P + +KL+ LKDL L N+L+ +P G
Sbjct: 148 LPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKS-VPDG 199
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 50/228 (21%), Positives = 75/228 (32%), Gaps = 55/228 (24%)
Query: 117 IPTNI-CSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFA--GGIPKEIGNL 173
P + NL K + + + + +D GI L
Sbjct: 13 FPDDAFAET----IKANLKKKSVTD--AVTQNELNSIDQIIANNSDIKSVQGIQY----L 62
Query: 174 TKLEELYLSFNGLQ--GAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALG 231
+ L L N L A L NL L L
Sbjct: 63 PNVRYLALGGNKLHDISALKE-----------------------------LTNLTYLILT 93
Query: 232 LNKLVGVIPAEIFN-MSTIQGVGLQNNSLSGSLQSIP---YVRLPNLEELYLWGNHFSGS 287
N+L + P +F+ ++ ++ + L N LQS+P + +L NL L L N S
Sbjct: 94 GNQLQSL-PNGVFDKLTNLKELVLVEN----QLQSLPDGVFDKLTNLTYLNLAHNQLQ-S 147
Query: 288 IPNFIFNA-SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTS 334
+P +F+ + L+ L+L N F L LK L L N L S
Sbjct: 148 LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 3e-12
Identities = 56/205 (27%), Positives = 78/205 (38%), Gaps = 41/205 (20%)
Query: 397 NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIP--DEVCRLAKVYQLDL 454
L ++ +++ I L ++ L NKL I L + L L
Sbjct: 39 ELNSIDQIIANNSDIKSVQGIQ--YLPNVRYLALGGNKLH-DISALK---ELTNLTYLIL 92
Query: 455 SNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL 513
+ N+L S+P F L +L+ L L N+L S+ F L ++ YLNL+ N L L
Sbjct: 93 TGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS---L 148
Query: 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGDLMSLKSL 572
G L L L L YN LQ S+P+ F L LK L
Sbjct: 149 PKGVFDKLTN---------------------LTELDLSYNQLQ-SLPEGVFDKLTQLKDL 186
Query: 573 NLSNNNLSGSIPV----SLEKLSYL 593
L N L S+P L L Y+
Sbjct: 187 RLYQNQLK-SVPDGVFDRLTSLQYI 210
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 56/216 (25%), Positives = 78/216 (36%), Gaps = 42/216 (19%)
Query: 221 NLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIP-YVRLPNLEELYL 279
L +++ + + + V I + ++ + L N L I L NL L L
Sbjct: 39 ELNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKL----HDISALKELTNLTYLIL 92
Query: 280 WGNHFSGSIPNFIFNA-SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLE 338
GN S+PN +F+ + L L L +N F L NL L L +N L S L
Sbjct: 93 TGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS--LP 149
Query: 339 LSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNL 398
L+N L DLS N L G +FD L
Sbjct: 150 KGVFDKLTNLTEL---DLSYNQ----LQSLPEG-------VFD---------------KL 180
Query: 399 TNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDN 433
T L L N L S+P +L LQ ++ DN
Sbjct: 181 TQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 4e-06
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 59 NISHLSLSGTIPSRLG---NLSSLQSLFLHSNQFSGSIPFSIFNIHT-LKLLSFGDNQLS 114
N+ +L+L G + L++L L L NQ S+P +F+ T LK L +NQL
Sbjct: 64 NVRYLALGGNKLHDISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ 122
Query: 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNL 173
+P + L LNL+ N T L L LSYN +P+ + L
Sbjct: 123 -SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKL 180
Query: 174 TKLEELYLSFNGLQ----GAYD 191
T+L++L L N L+ G +D
Sbjct: 181 TQLKDLRLYQNQLKSVPDGVFD 202
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 5e-06
Identities = 47/191 (24%), Positives = 70/191 (36%), Gaps = 46/191 (24%)
Query: 76 LSSLQSLFLHSNQFSGSIPFSIFNIHT-LKLLSFGDNQLSGEIPTNICSNLPFFESLNLS 134
L +++ L L N+ I T L L NQL +P + L + L L
Sbjct: 62 LPNVRYLALGGNKLH-DIS--ALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLV 117
Query: 135 KNMFH---GGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ---- 187
+N G+ L+N L L L++N LT L EL LS+N LQ
Sbjct: 118 ENQLQSLPDGVFDKLTN---LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174
Query: 188 GAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF-NM 246
G +D L L+ L L N+L V P +F +
Sbjct: 175 GVFD-----------------------------KLTQLKDLRLYQNQLKSV-PDGVFDRL 204
Query: 247 STIQGVGLQNN 257
+++Q + L +N
Sbjct: 205 TSLQYIWLHDN 215
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 1e-13
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 28/155 (18%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV------ECEVMKSIRHRNII 765
+G G FG V + G +VAVK+ N+Q +S DV E + +K RH +II
Sbjct: 23 TLGVGTFGKVKVGKHELTGHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-----LDIFQRLNIMIDVASAL 820
K+ I +F + +EY+ G L Y+ + + +FQ++ S +
Sbjct: 80 KLYQV--ISTPSDIF--MVMEYVSGGELFDYICKNGRLDEKESRRLFQQI------LSGV 129
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+Y + V+H DLKP NVLL +M A ++DFG
Sbjct: 130 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFG 161
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 1e-13
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK----VFNQQ--CGRAFKSFDVECEVMKSIRHRNIIK 766
IG G +G V +A + VA+K VF C R + E ++ + H +++K
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR----EIAILNRLNHDHVVK 116
Query: 767 ---IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
I+ + F L+ + LE +K + Y+ ++ + ++ ++ ++Y+
Sbjct: 117 VLDIVIPKDVEKFDELY--VVLEIADS-DFKKLFRTPVYLTELHIKT-LLYNLLVGVKYV 172
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ S ++H DLKP+N L+ + + DFG
Sbjct: 173 H---SAGILHRDLKPANCLVNQDCSVKVCDFG 201
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 48/184 (26%), Positives = 67/184 (36%), Gaps = 37/184 (20%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFN------QQCGRAFKSFDVECEVMKSIRHRNII 765
IG G FG R VAVK + R E +S+RH NI+
Sbjct: 27 DIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQR-------EIINHRSLRHPNIV 79
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-----LDIFQRLNIMIDVASAL 820
+ I L + +EY G L + + ++ FQ+L S +
Sbjct: 80 RFKEV--ILTPTHLA--IIMEYASGGELYERICNAGRFSEDEARFFFQQL------LSGV 129
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL--SDFGITKLLTREDQFVTQTQTPATIGY 878
Y +S + H DLK N LL + L DFG +K Q + TPA Y
Sbjct: 130 SYC---HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA---Y 183
Query: 879 MALE 882
+A E
Sbjct: 184 IAPE 187
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 2e-13
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 17/176 (9%)
Query: 703 QATDGFSENNLIGRGGFGSVYKARIQD-GMEVAVK-VFNQQ--CGRAFKSFDVECEVMKS 758
+ D F + G+G FG+V + + GM VA+K V R + + +
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ----IMQDLAV 75
Query: 759 IRHRNIIKIISC---CSIGDFKALFKALALEYMP---HGSLEKYLYSSNYILDIFQRLNI 812
+ H NI+++ S D + ++ + +EY+P H Y I ++
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV-F 134
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFV 867
+ + ++ L+ S V H D+KP NVL+ + L DFG K L+ + V
Sbjct: 135 LFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV 189
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 2e-13
Identities = 62/371 (16%), Positives = 111/371 (29%), Gaps = 88/371 (23%)
Query: 73 LGNLSSLQSLFLHSNQFSG----SIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNL--- 125
+ S ++ L + + S+ + ++K + N + E + N+
Sbjct: 1 MARFS-IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASK 59
Query: 126 PFFESLNLSKNMF----------HGGIPSALSNCTYLRILRLSYNDF----AGGIPKEIG 171
E S + AL C L +RLS N F + +
Sbjct: 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLS 119
Query: 172 NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALG 231
T LE LYL NGL +I + + + + N L + G
Sbjct: 120 KHTPLEHLYLHNNGLG---PQAGAKI---------ARALQELAVNKKAKNAPPLRSIICG 167
Query: 232 LNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHF-----SG 286
N+L + + Q++ L + + N
Sbjct: 168 RNRL-ENGSMKEW------AKTFQSH--------------RLLHTVKMVQNGIRPEGIEH 206
Query: 287 SIPNFIFNASKLSRLELQKNSFSG----FIPSTFGNLRNLKRLGLNNNHLTSLTLEL--S 340
+ + +L L+LQ N+F+ + + NL+ LGLN+ L++
Sbjct: 207 LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266
Query: 341 FLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTN 400
S L N L+ + L N I +V L + + +
Sbjct: 267 AFSKLENIG-LQTLRLQYNEI----ELDAVRTLKTVID-----------------EKMPD 304
Query: 401 LIGFYLGGNNL 411
L+ L GN
Sbjct: 305 LLFLELNGNRF 315
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 1e-09
Identities = 61/325 (18%), Positives = 116/325 (35%), Gaps = 54/325 (16%)
Query: 320 RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL---SHS 376
+++ L + +T+ + S + L ++ I LS N+I G + + +
Sbjct: 4 FSIEGKSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTI-GTEAARWLSENIASKKD 61
Query: 377 LKIFDMSDCNVS----------GSIPEEIGNLTNLIGFYLGGNNL--NGSIPIT--LGKL 422
L+I + SD + + + L L N P+ L K
Sbjct: 62 LEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKH 121
Query: 423 QKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNE 482
L+ LY +N L P ++A+ Q N K + LR++ N
Sbjct: 122 TPLEHLYLHNNGLG---PQAGAKIARALQELAVNKKAKNA--------PPLRSIICGRNR 170
Query: 483 L----ISVIPSTFWNLKDILYLNLSSNSLT-----GPLPLEIGNLKVLVKIDFSMNNFSG 533
L + TF + + + + + N + L + + L +D N F+
Sbjct: 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTH 230
Query: 534 ----VIPNAIGGIKDLQFLFLEYNILQG----SIPDSFGDL--MSLKSLNLSNNNLSGSI 583
+ A+ +L+ L L +L ++ D+F L + L++L L N +
Sbjct: 231 LGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDA 290
Query: 584 PVSL-----EKLSYLKDLNLSFNKL 603
+L EK+ L L L+ N+
Sbjct: 291 VRTLKTVIDEKMPDLLFLELNGNRF 315
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 6e-09
Identities = 59/379 (15%), Positives = 109/379 (28%), Gaps = 89/379 (23%)
Query: 102 TLKLLSFGDNQLSGEIPTNICSNL---PFFESLNLSKNMF-HGG---IPSALSNCTYLRI 154
+++ S + ++ E ++ + L + + LS N + +++ L I
Sbjct: 5 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEI 64
Query: 155 LRLSYNDF----------AGGIPKEIGNLTKLEELYLSFN--GLQGAYDHGFLQIFVKNI 202
S + + + KL + LS N G
Sbjct: 65 AEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ------------- 111
Query: 203 FVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGS 262
+ + + LE L L N L Q +L
Sbjct: 112 ----------EPLIDFLSKHTPLEHLYLHNNGL------------GPQAGAKIARALQEL 149
Query: 263 LQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNL 322
+ P L + N N TF + R L
Sbjct: 150 AVNKKAKNAPPLRSIICGRNRLE--------------------NGSMKEWAKTFQSHRLL 189
Query: 323 KRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI--DGILSRKSVGNLSHSLKIF 380
+ + N + +E L L+ C+ L+ +DL N+ G + +L+
Sbjct: 190 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249
Query: 381 DMSDCNVSG----SIPEEIGNLTN--LIGFYLGGNNLNGSIPITLG-----KLQKLQVLY 429
++DC +S ++ + L N L L N + TL K+ L L
Sbjct: 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLE 309
Query: 430 FPDNKL--EGSIPDEVCRL 446
N+ E + DE+ +
Sbjct: 310 LNGNRFSEEDDVVDEIREV 328
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 3e-13
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFK-SFDVECE----- 754
C + + IG+G FG V+KAR + G +VA+K K + E E
Sbjct: 13 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK----------KVLMENEKEGFPIT 62
Query: 755 ------VMKSIRHRNIIKII------SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY 802
+++ ++H N++ +I + +++ L ++ H L L +
Sbjct: 63 ALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY--LVFDFCEH-DLAGLLSNVLV 119
Query: 803 ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ + +M + + L Y++ ++H D+K +NVL+ + V L+DFG
Sbjct: 120 KFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFG 169
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-13
Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+G G +G V A VAVK+ + ++ ++ E + K + H N++K
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-----LDIFQRLNIMIDVASALEYLYF 825
+ + L LEY G L + + F +L + + YL+
Sbjct: 74 --RREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865
+ H D+KP N+LL + +SDFG+ + ++
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 4e-13
Identities = 57/270 (21%), Positives = 95/270 (35%), Gaps = 46/270 (17%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVK-------------VFNQQ--CGRAFKSFDVECEVMKS 758
I G +G+V +G+ VA+K + + C R + E ++
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR----EIRLLNH 85
Query: 759 IRHRNIIK---IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMID 815
H NI+ I L+ L E M L + ++ ++ M
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLY--LVTELMR-TDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ-TQTPA 874
+ L L+ V+H DL P N+LL DN + DF L RED T
Sbjct: 143 ILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFN----LAREDTADANKTHYVT 195
Query: 875 TIGYMALEY-GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933
Y A E + D+++ G ++ E F K +F G + N
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK----ALF-RG---STFYNQLNK-- 245
Query: 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNM 963
I+++V G+ ED+ + ++ N
Sbjct: 246 IVEVV-GT-PKIEDVVMFSSPSARDYLRNS 273
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 5e-13
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK-VFNQQCGRAFKSFDV----ECEVMKSIRHRNIIKI 767
+G G F +VYKAR VA+K + A + E ++++ + H NII +
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ G + L ++M LE + ++ +L M+ LEYL+
Sbjct: 78 LDA--FGHKSNIS--LVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH--- 129
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFG 855
++H DLKP+N+LL +N V L+DFG
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFG 157
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 5e-13
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 29/162 (17%)
Query: 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510
+LDL + L+ A F L L L+L N+L ++ F +L ++ L L++N L
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS- 97
Query: 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGDLMSL 569
L +G L + L L+L N L+ S+P F L L
Sbjct: 98 --LPLGVFDHLTQ---------------------LDKLYLGGNQLK-SLPSGVFDRLTKL 133
Query: 570 KSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNKLEGEIPKG 610
K L L+ N L SIP +KL+ L+ L+LS N+L+ +P G
Sbjct: 134 KELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQS-VPHG 173
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 8e-13
Identities = 63/246 (25%), Positives = 88/246 (35%), Gaps = 72/246 (29%)
Query: 260 SGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNL 319
SL S+P + E+L L + +KL+ L L N F +L
Sbjct: 23 GKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDL 82
Query: 320 RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKI 379
L LGL NN L SL L +
Sbjct: 83 TELGTLGLANNQLASL----------------------------------------PLGV 102
Query: 380 FDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITL-GKLQKLQVLYFPDNKLEGS 438
FD +LT L YLGGN L S+P + +L KL+ L N+L+ S
Sbjct: 103 FD---------------HLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-S 145
Query: 439 IPDEVC-RLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWN--L 494
IP +L + L LS N+L S+P F L L+ ++L N ++
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN------Q---FDCSR 195
Query: 495 KDILYL 500
+ILYL
Sbjct: 196 CEILYL 201
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 3e-12
Identities = 51/199 (25%), Positives = 67/199 (33%), Gaps = 50/199 (25%)
Query: 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ----GAYDHGFLQ 196
GIP L L A LTKL L L +N LQ G +D
Sbjct: 32 GIP------ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD---- 81
Query: 197 IFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMST-IQGVGLQ 255
L L L L N+L +P +F+ T + + L
Sbjct: 82 -------------------------LTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLG 115
Query: 256 NNSLSGSLQSIP---YVRLPNLEELYLWGNHFSGSIPNFIFNA-SKLSRLELQKNSFSGF 311
N L+S+P + RL L+EL L N SIP F+ + L L L N
Sbjct: 116 GN----QLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSV 170
Query: 312 IPSTFGNLRNLKRLGLNNN 330
F L L+ + L N
Sbjct: 171 PHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 1e-11
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 30/179 (16%)
Query: 426 QVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELI 484
+ L L L K+ L+L N+L ++ A F DL L L LA+N+L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLA 96
Query: 485 SVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKD 544
S+ F +L + L L N L LP +
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLKS-LP-----------------------SGVFDRLTK 132
Query: 545 LQFLFLEYNILQGSIPDS-FGDLMSLKSLNLSNNNLSGSIPV-SLEKLSYLKDLNLSFN 601
L+ L L N LQ SIP F L +L++L+LS N L S+P + ++L L+ + L N
Sbjct: 133 LKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 226 EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIP---YVRLPNLEELYLWGN 282
E L L L + A ++ + + L N LQ++ + L L L L N
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYN----QLQTLSAGVFDDLTELGTLGLANN 93
Query: 283 HFSGSIPNFIFNA-SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335
+ S+P +F+ ++L +L L N F L LK L LN N L S+
Sbjct: 94 QLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 8e-09
Identities = 52/227 (22%), Positives = 81/227 (35%), Gaps = 59/227 (25%)
Query: 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNI 100
CN D + + +PS G + + L L S + ++ + F
Sbjct: 12 CNEGKKEVDCQGKSLDS-----------VPS--GIPADTEKLDLQSTGLA-TLSDATFRG 57
Query: 101 HT-LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFH---GGIPSALSNCTYLRILR 156
T L L+ NQL + + +L +L L+ N G+ L+ L L
Sbjct: 58 LTKLTWLNLDYNQLQT-LSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQ---LDKLY 113
Query: 157 LSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQ----GAYDHGFLQIFVKNIFVQFSHNFS 211
L N +P + LTKL+EL L+ N LQ GA+D
Sbjct: 114 LGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFD-------------------- 152
Query: 212 KCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNN 257
L NL+ L+L N+L +P F + +Q + L N
Sbjct: 153 ---------KLTNLQTLSLSTNQLQS-VPHGAFDRLGKLQTITLFGN 189
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 71.3 bits (174), Expect = 7e-13
Identities = 32/282 (11%), Positives = 86/282 (30%), Gaps = 24/282 (8%)
Query: 122 CSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYL 181
+LP + I + + +L+ + ++ +L L
Sbjct: 301 LCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECW----CRDSATDEQLFRCEL 356
Query: 182 SFNGLQGAYDH-GFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIP 240
S + + + + + L + + L V P
Sbjct: 357 SVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDP 416
Query: 241 AEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSR 300
+ ++ L NS+ ++ L+L + + + + ++
Sbjct: 417 MRAAYLDDLRSKFLLENSVLKMEY-------ADVRVLHLAHKDLT-VLCH-LEQLLLVTH 467
Query: 301 LELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNS 360
L+L N +P LR L+ L ++N L + + ++N L+ + L +N
Sbjct: 468 LDLSHNRLRA-LPPALAALRCLEVLQASDNALEN-------VDGVANLPRLQELLLCNNR 519
Query: 361 IDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLI 402
+ + + + + L + ++ ++ L ++
Sbjct: 520 LQQSAAIQPLVSC-PRLVLLNLQGNSLC-QEEGIQERLAEML 559
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 70.6 bits (172), Expect = 1e-12
Identities = 43/219 (19%), Positives = 78/219 (35%), Gaps = 25/219 (11%)
Query: 270 RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNN 329
L L S + + + + +L LE + N L + L
Sbjct: 347 TDEQLFRCELSVEK-STVLQSELESCKELQELEPE-------------NKWCLLTIILLM 392
Query: 330 NHLTSLTLELSFLSSLSNCKYLEFIDLS---SNSIDGILSRKSVGNLSHSLKIFDMSDCN 386
L L E L S K ++ + + +L + +++ ++ +
Sbjct: 393 RALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKD 452
Query: 387 VSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRL 446
++ + + L + L N L ++P L L+ L+VL DN LE ++ V L
Sbjct: 453 LT--VLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANL 507
Query: 447 AKVYQLDLSNNKLSGSIPA--CFGDLASLRNLSLASNEL 483
++ +L L NN+L A L L+L N L
Sbjct: 508 PRLQELLLCNNRLQ-QSAAIQPLVSCPRLVLLNLQGNSL 545
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 67.5 bits (164), Expect = 1e-11
Identities = 45/215 (20%), Positives = 73/215 (33%), Gaps = 14/215 (6%)
Query: 392 PEEIGNLTNLIGFYLGGNNLNG--SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKV 449
+ L L S + +LQ+L+ + + L
Sbjct: 342 CRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYE 401
Query: 450 YQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG 509
+ + L P L LR+ L N + D+ L+L+ LT
Sbjct: 402 KETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSV------LKMEYADVRVLHLAHKDLTV 455
Query: 510 PLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSL 569
LE L ++ +D S N +P A+ ++ L+ L N L+ ++ +L L
Sbjct: 456 LCHLE--QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRL 510
Query: 570 KSLNLSNNNLSG-SIPVSLEKLSYLKDLNLSFNKL 603
+ L L NN L + L L LNL N L
Sbjct: 511 QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 2e-11
Identities = 60/392 (15%), Positives = 118/392 (30%), Gaps = 27/392 (6%)
Query: 144 SALSNCTYL--RILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKN 201
S+ + L ++ + G +P+ + +EL L N + + +
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLL----KELELVQNAFFTDPNDQSAWFYHRW 234
Query: 202 IFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSG 261
+ + + C + + L + + V +
Sbjct: 235 LLGRAEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRN 294
Query: 262 SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRN 321
+ LP H I + + L+ + +
Sbjct: 295 RPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECW----CRDSATDEQ 350
Query: 322 LKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFD 381
L R L+ T L EL L + L + I + + + +L+ F
Sbjct: 351 LFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTI-ILLMRALDPLLYEKETLQYFS 409
Query: 382 MSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPD 441
+ P L +L +L N + + ++VL+ L +
Sbjct: 410 ----TLKAVDPMRAAYLDDLRSKFLLEN------SVLKMEYADVRVLHLAHKDLT-VLC- 457
Query: 442 EVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLN 501
+ +L V LDLS+N+L ++P L L L + N L +V NL + L
Sbjct: 458 HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV--DGVANLPRLQELL 514
Query: 502 LSSNSLTG-PLPLEIGNLKVLVKIDFSMNNFS 532
L +N L + + LV ++ N+
Sbjct: 515 LCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 65.2 bits (158), Expect = 6e-11
Identities = 41/316 (12%), Positives = 76/316 (24%), Gaps = 36/316 (11%)
Query: 282 NHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSF 341
N L + + +
Sbjct: 282 PLSVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECW 341
Query: 342 LSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNL 401
+ + L +LS + S L+ + + + L
Sbjct: 342 CRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYE 401
Query: 402 IGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSG 461
+ L P+ + L +K A V L L++ L+
Sbjct: 402 KETLQYFSTLKAVDPM------RAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT- 454
Query: 462 SIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVL 521
+ L + +L L+ N + +P L+ + L S N+L + + L
Sbjct: 455 VLCH-LEQLLLVTHLDLSHNR-LRALPPALAALRCLEVLQASDNALE-----NVDGVANL 507
Query: 522 VKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYN-ILQGSIPDSFGDLMSLKSLNLSNNNLS 580
+ LQ L L N + Q + L LNL N+L
Sbjct: 508 PR---------------------LQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546
Query: 581 GSIPVSLEKLSYLKDL 596
+ L +
Sbjct: 547 QEEGIQERLAEMLPSV 562
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 63.6 bits (154), Expect = 2e-10
Identities = 31/166 (18%), Positives = 66/166 (39%), Gaps = 9/166 (5%)
Query: 440 PDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASN-ELISVIPSTFWNLKDIL 498
+ ++++ +LS K + + + L+ L + L+++I ++ +
Sbjct: 342 CRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTII----LLMRALD 396
Query: 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGS 558
L +L L+ + +D + F D++ L L + L +
Sbjct: 397 PLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDL--T 454
Query: 559 IPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
+ L+ + L+LS+N L ++P +L L L+ L S N LE
Sbjct: 455 VLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE 499
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 4e-04
Identities = 26/146 (17%), Positives = 44/146 (30%), Gaps = 15/146 (10%)
Query: 4 NTSNITTDLDALHAL-KTHITNDPTNFFAKNWNSSISFCNWTGVTC-DVHSHRVTAL--- 58
L A+ +S+ + V + +T L
Sbjct: 400 YEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHL 459
Query: 59 ----NISHLSLSG----TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGD 110
++HL LS +P L L L+ L N ++ + N+ L+ L +
Sbjct: 460 EQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCN 517
Query: 111 NQLSGEIPTNICSNLPFFESLNLSKN 136
N+L + P LNL N
Sbjct: 518 NRLQQSAAIQPLVSCPRLVLLNLQGN 543
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 7e-13
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 28/165 (16%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECE------- 754
+ + + +G G +G VYKA+ G VA+K D E E
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR---------LDAEDEGIPSTAI 67
Query: 755 ----VMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL 810
++K + H NI+ +I I + L L E+M L+K L + L Q
Sbjct: 68 REISLLKELHHPNIVSLIDV--IHSERCLT--LVFEFMEK-DLKKVLDENKTGLQDSQIK 122
Query: 811 NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ + + + + ++H DLKP N+L+ + L+DFG
Sbjct: 123 IYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFG 164
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 8e-13
Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 31/160 (19%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV------ECEVMKSIRHR--N 763
L+G GGFGSVY + D + VA+K + + E ++K +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 764 IIKIISCCSIGDFKALFKALALEY-MPHGSLEKYLYSSNYILDIFQRLN------IMIDV 816
+I+++ + L LE P L ++ L V
Sbjct: 110 VIRLLDW--FERPDSFV--LILERPEPVQDLFDFITER-------GALQEELARSFFWQV 158
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFG 855
A+ + ++ V+H D+K N+L+ + L DFG
Sbjct: 159 LEAVRHC---HNCGVLHRDIKDENILIDLNRGELKLIDFG 195
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 9e-13
Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 35/211 (16%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK----VFNQQ--CGRAFKSFDVECEVMKSIRHRNIIK 766
IG G G V A VA+K F Q RA++ E +MK + H+NII
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNIIG 88
Query: 767 I----ISCCSIGDFKALFKALALEYMP---HGSLEKYLYSSNYILDIFQRLNIMIDVASA 819
+ S+ +F+ ++ + +E M ++ L ++Q L
Sbjct: 89 LLNVFTPQKSLEEFQDVY--IVMELMDANLCQVIQMELDHERMSYLLYQMLC-------G 139
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQTQTPATIGY 878
+++L+ S +IH DLKPSN+++ + + DFG L R T T Y
Sbjct: 140 IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG----LARTAGTSFMMTPYVVTRYY 192
Query: 879 MALEYGSEGRVSTNGDVYNFGVMLMETFTGK 909
A E N D+++ G ++ E G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 1e-12
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 11/145 (7%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVF-NQQCGRAFKSFDV-ECEVMKSIRHRNIIKIISC 770
IG G +G V+K R G VA+K F + K + E ++K ++H N++ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP 830
+ L L EY H ++ L + +I A+ + +
Sbjct: 71 --FRRKRRLH--LVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH---KHN 122
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFG 855
IH D+KP N+L+ + V L DFG
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFG 147
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 1e-12
Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 23/161 (14%)
Query: 710 ENNLIGRGGFGSVYKAR---IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
E +GRG +G VYKA+ +D + A+K G + + E +++ ++H N+I
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT-GISMSACR-EIALLRELKHPNVIS 82
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYL--------YSSNYILDIFQRLNIMIDVAS 818
+ + ++ L +Y H L + L +++ +
Sbjct: 83 LQKVFLSHADRKVW--LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 139
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH----LSDFG 855
+ YL+ + V+H DLKP+N+L+ ++D G
Sbjct: 140 GIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMG 177
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 1e-12
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 28/161 (17%)
Query: 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECE----------- 754
+ + IG G +G VYKA+ G A+K + E E
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR---------LEKEDEGIPSTTIREIS 52
Query: 755 VMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMI 814
++K ++H NI+K+ I K L L E++ L+K L L+ + ++
Sbjct: 53 ILKELKHSNIVKLYDV--IHTKKRLV--LVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLL 107
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ + + Y + V+H DLKP N+L+ ++DFG
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFG 145
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 2e-12
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 52/223 (23%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVECEVMKSIRH----RNIIKI 767
IG+G FG V + D ++ A+K N+Q +C +R+ I++
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQ----------KCVERNEVRNVFKELQIMQG 71
Query: 768 ISC-------CSIGDFKALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLN 811
+ S D + +F + ++ + G L +L + +I ++
Sbjct: 72 LEHPFLVNLWYSFQDEEDMF--MVVDLLLGGDLRYHLQQNVHFKEETVKLFICEL----- 124
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
AL+YL + +IH D+KP N+LL ++ H++DF I +L RE Q T
Sbjct: 125 -----VMALDYL---QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAG 176
Query: 872 TPATIGYMALE-YGSEGRVSTNGDV--YNFGVMLMETFTGKKP 911
T YMA E + S + V ++ GV E G++P
Sbjct: 177 TKP---YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 2e-12
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 38/220 (17%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKV---------FNQQCGRAFKSFDVECEVMKSIRHRN 763
IG G +G+V+KA+ + VA+K R E ++K ++H+N
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-------EICLLKELKHKN 62
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
I+++ + K L L E+ L+KY S N LD + + + L +
Sbjct: 63 IVRLHDV--LHSDKKLT--LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP--ATIGYMAL 881
+ S V+H DLKP N+L+ N L++FG L R + + T+ Y
Sbjct: 118 H---SRNVLHRDLKPQNLLINRNGELKLANFG----LARAFGIPVRCYSAEVVTLWYRPP 170
Query: 882 E--YGSEGRVSTNGDVYNFGVMLMETFTGKKP----TNEI 915
+ +G++ ST+ D+++ G + E +P +
Sbjct: 171 DVLFGAK-LYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 3e-12
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 695 RFSYLELCQAT-DGFSENNLIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVE 752
++ +LE D F + ++GRGGFG V+ +++ ++ A K N++ R K +
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKK--RLKKRKGYQ 230
Query: 753 C-----EVMKSIRHRNIIKIISCCSIGDFK---ALFKALALEYMPHGSLEKYLYSSNYIL 804
+++ + R I+ + F+ L L + M G + ++Y+ +
Sbjct: 231 GAMVEKKILAKVHSRFIVSLAYA-----FETKTDLC--LVMTIMNGGDIRYHIYNVDEDN 283
Query: 805 DIF--QRLNIMI-DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861
F R + S LE+L + +I+ DLKP NVLL D+ +SD G+ L
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 862 REDQFVTQTQTPA-TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
T+T+ A T G+MA E + D + GV L E + P
Sbjct: 341 AGQ---TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 3e-12
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFN----QQCGRAFKSFDVECEV--MKSIR----H 761
L+G+GGFG+V+ + D ++VA+KV S EV + + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 762 RNIIKIISCCSIGDFKALFKALALEY-MPHGSLEKYLYSSNYILDIFQRLNIMIDVASAL 820
+I+++ + L LE +P L Y+ + + R V +A+
Sbjct: 98 PGVIRLLDW--FETQEGFM--LVLERPLPAQDLFDYITEKGPLGEGPSR-CFFGQVVAAI 152
Query: 821 EYLYFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFG 855
++ +S V+H D+K N+L+ A L DFG
Sbjct: 153 QHC---HSRGVVHRDIKDENILIDLRRGCAKLIDFG 185
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 4e-12
Identities = 60/274 (21%), Positives = 112/274 (40%), Gaps = 48/274 (17%)
Query: 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVK----VFNQQ--CGRAFKSFDVECEVMK 757
+ +G G +GSV A + G +VA+K F + RA++ E ++K
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR----ELLLLK 78
Query: 758 SIRHRNIIKI----ISCCSIGDFKALFKALALEYMP---HGSLEKYLYSSNYILDIFQRL 810
++H N+I + S+ +F + L + +M + ++Q L
Sbjct: 79 HMQHENVIGLLDVFTPASSLRNFYDFY--LVMPFMQTDLQKIMGLKFSEEKIQYLVYQML 136
Query: 811 NIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870
L+Y++ S V+H DLKP N+ + ++ + DFG L R T
Sbjct: 137 K-------GLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG----LARH-ADAEMT 181
Query: 871 QTPATIGYMALE-YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929
T Y A E S + D+++ G ++ E TGK +F +G K +++
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK----TLF-KG---KDYLDQL 233
Query: 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNM 963
I+K+ G E +Q + + S++ ++
Sbjct: 234 TQ--ILKVT-GV-PGTEFVQKLNDKAAKSYIQSL 263
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 4e-12
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 452 LDLSNNKLSGSIP--ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG 509
L L+NN+ + + F L LR ++ ++N++ + F + + L+SN L
Sbjct: 37 LRLNNNEFT-VLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 95
Query: 510 PLPLEI-GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLM 567
+ ++ L+ L + N + V ++ G+ ++ L L N + ++ +F L
Sbjct: 96 -VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLH 153
Query: 568 SLKSLNLSNN 577
SL +LNL N
Sbjct: 154 SLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 6e-12
Identities = 37/196 (18%), Positives = 58/196 (29%), Gaps = 67/196 (34%)
Query: 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQ----GAYDHGFL 195
IP Y LRL+ N+F I L +L ++ S N + GA++
Sbjct: 29 HIP------QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEG--- 79
Query: 196 QIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQ 255
+ + L N+L + ++F
Sbjct: 80 --------------------------ASGVNEILLTSNRLEN-VQHKMFK---------- 102
Query: 256 NNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA-SKLSRLELQKNSFSGFIPS 314
L +L+ L L N + + N F S + L L N + P
Sbjct: 103 --------------GLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQITTVAPG 147
Query: 315 TFGNLRNLKRLGLNNN 330
F L +L L L N
Sbjct: 148 AFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 1e-10
Identities = 34/164 (20%), Positives = 57/164 (34%), Gaps = 36/164 (21%)
Query: 321 NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIF 380
L LNNN T L F L I+ S+N I I F
Sbjct: 33 YTAELRLNNNEFTVLEATGIF----KKLPQLRKINFSNNKITDI-----------EEGAF 77
Query: 381 DMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSI 439
+ + + L N L ++ L+ L+ L N++ +
Sbjct: 78 E---------------GASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRIT-CV 120
Query: 440 PDEV-CRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASN 481
++ L+ V L L +N+++ ++ F L SL L+L +N
Sbjct: 121 GNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 9e-10
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 33/161 (20%)
Query: 453 DLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSLTGPL 511
D SN KL+ IP L L +NE + + F L + +N S+N +T
Sbjct: 17 DCSNQKLN-KIPE--HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD-- 71
Query: 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGDLMSLK 570
+E G + + + L N L+ ++ F L SLK
Sbjct: 72 -IEEGAFEGASG---------------------VNEILLTSNRLE-NVQHKMFKGLESLK 108
Query: 571 SLNLSNNNLSGSIPV-SLEKLSYLKDLNLSFNKLEGEIPKG 610
+L L +N ++ + S LS ++ L+L N++ + G
Sbjct: 109 TLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAPG 147
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 1e-09
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN-ASK 297
IP I + L NN + + + +LP L ++ N + I F AS
Sbjct: 26 IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASG 82
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335
++ + L N F L +LK L L +N +T +
Sbjct: 83 VNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCV 120
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 33/205 (16%), Positives = 61/205 (29%), Gaps = 78/205 (38%)
Query: 106 LSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGG 165
L +N+ + T I LP +N S N +I + F G
Sbjct: 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNN----------------KITDIEEGAFEG- 79
Query: 166 IPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI-GNLRN 224
+ + E+ L+ N L+ + +++ L +
Sbjct: 80 -------ASGVNEILLTSNRLE--------------------------NVQHKMFKGLES 106
Query: 225 LEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHF 284
L+ L L N++ + + F L ++ L L+ N
Sbjct: 107 LKTLMLRSNRIT-CVGNDSFI------------------------GLSSVRLLSLYDNQI 141
Query: 285 SGSIPNFIFNA-SKLSRLELQKNSF 308
+ ++ F+ LS L L N F
Sbjct: 142 T-TVAPGAFDTLHSLSTLNLLANPF 165
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 5e-12
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK----VFNQQ--CGRAFKSFDVECEVMKSIRHRNIIK 766
IGRG +G VY A VA+K +F C R + E ++ ++ II+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR----EITILNRLKSDYIIR 89
Query: 767 IISCC---SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
+ + F L+ + LE L+K + ++ + + I+ ++ ++
Sbjct: 90 LYDLIIPDDLLKFDELY--IVLEIADS-DLKKLFKTPIFLTEEHIKT-ILYNLLLGENFI 145
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ + +IH DLKP+N LL + + DFG
Sbjct: 146 H---ESGIIHRDLKPANCLLNQDCSVKVCDFG 174
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 5e-12
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVEC-----EVMKSIRHRNIIK 766
++G G F +V AR + E A+K+ ++ K V +VM + H +K
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ D + L+ L Y +G L KY+ + R ++ SALEYL+
Sbjct: 95 LYFTFQ--DDEKLY--FGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH-- 147
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQT--QTPATIGYMALEY 883
+IH DLKP N+LL ++M ++DFG K+L+ Q + T Y++ E
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ---YVSPEL 203
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIF 916
+E + D++ G ++ + G P IF
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 241
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 5e-12
Identities = 41/213 (19%), Positives = 74/213 (34%), Gaps = 50/213 (23%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV-----ECEVMKSIRHR-NIIK 766
+GRG F V + G E A K + R E V++ + +I
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKK---RRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL--------------NI 812
+ + + L LEY G + F +
Sbjct: 94 LHEVYE--NTSEII--LILEYAAGGEI-------------FSLCLPELAEMVSENDVIRL 136
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH---LSDFGITKLLTREDQFVTQ 869
+ + + YL+ ++H DLKP N+LL + DFG+++ + +
Sbjct: 137 IKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI 193
Query: 870 TQTPATIGYMALEYGSEGRVSTNGDVYNFGVML 902
TP Y+A E + ++T D++N G++
Sbjct: 194 MGTP---EYLAPEILNYDPITTATDMWNIGIIA 223
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 6e-12
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVF-NQQCGRAFKSFDV-ECEVMKS 758
Q+ + + L+G G +G V K R G VA+K F + K + E +++K
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 759 IRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVAS 818
+RH N++ ++ C K + L E++ H ++ L LD + + +
Sbjct: 81 LRHENLVNLLEVCK--KKKRWY--LVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIIN 135
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ + + S +IH D+KP N+L+ + V L DFG
Sbjct: 136 GIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFG 169
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 7e-12
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 44/171 (25%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEV---MKSIRHRNIIKIIS 769
+G G G V + + + A+K+ EV ++ + +I++I+
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRASQCPHIVRIVD 78
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRL--------------NIMID 815
+ +E + G L F R+ IM
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGEL-------------FSRIQDRGDQAFTEREASEIMKS 125
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTRE 863
+ A++YL+ S + H D+KP N+L N + L+DFG K T E
Sbjct: 126 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 9e-12
Identities = 60/262 (22%), Positives = 113/262 (43%), Gaps = 41/262 (15%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK----VFNQQ--CGRAFKSFDVECEVMKSIRHRNIIK 766
+G G +GSV A + G+ VAVK F R ++ E ++K ++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 92
Query: 767 I----ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
+ S+ +F ++ L M L + D Q ++ + L+Y
Sbjct: 93 LLDVFTPARSLEEFNDVY--LVTHLMGA-DLNNIVKCQKLTDDHVQ--FLIYQILRGLKY 147
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
++ S +IH DLKPSN+ + ++ + DFG L R T AT Y A E
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFG----LARH-TADEMTGYVATRWYRAPE 199
Query: 883 -YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941
+ + D+++ G ++ E TG+ +F G ++ L I+++V G+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR----TLF-PG---TDHIDQLKL--ILRLV-GT 248
Query: 942 LLSREDIQFVAKEQCMSFVFNM 963
E ++ ++ E +++ ++
Sbjct: 249 -PGAELLKKISSESARNYIQSL 269
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 1e-11
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 29/174 (16%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV------ECEVMKSIRHRNII 765
+G G FG V A + +VA+K ++Q K D+ E +K +RH +II
Sbjct: 16 TLGEGSFGKVKLATHYKTQQKVALKFISRQ---LLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-----LDIFQRLNIMIDVASAL 820
K+ I + + +EY G L Y+ + FQ++ A+
Sbjct: 73 KLYDV--ITTPTDIV--MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQI------ICAI 121
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
EY + ++H DLKP N+LL DN+ ++DFG++ ++T + T +P
Sbjct: 122 EYC---HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN 172
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 1e-11
Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Query: 256 NNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKNSFSGFIPS 314
+ SL +P NL ELY+ + +L L + K+ P
Sbjct: 17 RDGALDSLHHLPG--AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74
Query: 315 TFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362
F L RL L+ N L +L + LS L+ + LS N +
Sbjct: 75 AFHFTPRLSRLNLSFNALE--SLSWKTVQGLS----LQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 59.0 bits (142), Expect = 3e-09
Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 438 SIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKD 496
+ + +L + N + + L LRNL++ + L V P F
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 497 ILYLNLSSNSLT 508
+ LNLS N+L
Sbjct: 82 LSRLNLSFNALE 93
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 52.4 bits (125), Expect = 4e-07
Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA-SK 297
+ + + ++N L+ L L L + + + F+ +
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPR 81
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
LSRL L N+ T L +L+ L L+ N L
Sbjct: 82 LSRLNLSFNALESLSWKTVQGL-SLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 7e-07
Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 390 SIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLYFPDNKLEGSIPDEV-CRLA 447
+ NL Y+ + L L +L+ L + L + +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTP 80
Query: 448 KVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNEL 483
++ +L+LS N L L SL+ L L+ N L
Sbjct: 81 RLSRLNLSFNALESLSWKTVQGL-SLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 9e-07
Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 26/125 (20%)
Query: 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSLTGPLPLE 514
+ +L L + + + + + L ++ L + + L
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL------- 68
Query: 515 IGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNL 574
V P+A L L L +N L+ + +SL+ L L
Sbjct: 69 -----------------RFVAPDAFHFTPRLSRLNLSFNALESLSWKTV-QGLSLQELVL 110
Query: 575 SNNNL 579
S N L
Sbjct: 111 SGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 2e-06
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 512 PLEIGNLKVLVKIDFSMNNFSGVIPN-AIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLK 570
+ + L ++ + + G+ +L+ L + + L+ PD+F L
Sbjct: 24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83
Query: 571 SLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603
LNLS N L S+ + L++L LS N L
Sbjct: 84 RLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 46.7 bits (110), Expect = 2e-05
Identities = 17/120 (14%), Positives = 31/120 (25%), Gaps = 29/120 (24%)
Query: 142 IPSALSNCTYLRILRLSYNDFAGGIPKE-IGNLTKLEELYLSFNGLQGAYDHGFLQIFVK 200
L L L + + + L +L L + +GL+
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR------------- 69
Query: 201 NIFVQFSHNFSKCEIPNEI-GNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSL 259
+ + L L L N L + + ++Q + L N L
Sbjct: 70 -------------FVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 3e-05
Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 68 TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-NIHTLKLLSFGDNQLSGEIPTNICSNLP 126
L +L L++ + Q + + L+ L+ + L + + P
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTP 80
Query: 127 FFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDF 162
LNLS N + + L+ L LS N
Sbjct: 81 RLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 3e-04
Identities = 8/54 (14%), Positives = 16/54 (29%), Gaps = 2/54 (3%)
Query: 558 SIPDSFGDLMSLKSLNLSNNNLSGSIP-VSLEKLSYLKDLNLSFNKLEGEIPKG 610
+L L + N + L L L++L + + L +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPD 74
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 5e-04
Identities = 21/143 (14%), Positives = 29/143 (20%), Gaps = 50/143 (34%)
Query: 166 IPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL 225
+ L ELY+ LQ L L
Sbjct: 23 SLHHLPGAENLTELYIENQQH--------LQHLELRDL----------------RGLGEL 58
Query: 226 EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS 285
L + + L + + F+ P L L L N
Sbjct: 59 RNLTIVKSGLR-FVAPDAFH------------------------FTPRLSRLNLSFNALE 93
Query: 286 GSIPNFIFNASKLSRLELQKNSF 308
S+ L L L N
Sbjct: 94 -SLSWKTVQGLSLQELVLSGNPL 115
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 2e-11
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 44/224 (19%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVEC--------EVMKS 758
FS + +IGRGGFG VY R D ++ A+K +++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK--RIKMKQGETLALNERIMLSLVST 248
Query: 759 IRHRNIIKIISCCSIGDFK---ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMID 815
I+ + F L L+ M G L +L + R +
Sbjct: 249 GDCPFIVCMSYA-----FHTPDKLS--FILDLMNGGDLHYHLSQHGVFSEADMRFYAA-E 300
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA- 874
+ LE++ ++ V++ DLKP+N+LL ++ +SD G+ +++ +
Sbjct: 301 IILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-----KPHASVG 352
Query: 875 TIGYMALEYGSEGRVSTNGDVYN-------FGVMLMETFTGKKP 911
T GYMA E V G Y+ G ML + G P
Sbjct: 353 THGYMAPE------VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 3e-11
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV--------FNQQCGRAFKSFDVECEVM 756
+ + + + +G G + +VYK + VA+K R E ++
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-------EVSLL 54
Query: 757 KSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDV 816
K ++H NI+ + I K+L L EY+ L++YL I+++ + +
Sbjct: 55 KDLKHANIVTLHDI--IHTEKSLT--LVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQL 109
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
L Y + V+H DLKP N+L+ + L+DFG
Sbjct: 110 LRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFG 145
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 3e-11
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 19/167 (11%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVA---VKVFNQQCGRAFKSFDVECEV-- 755
AT + IG G +G+VYKAR G VA V+V N G EV
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 756 ---MKSIRHRNIIK---IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-LDIFQ 808
+++ H N+++ + + + L E++ L YL + L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVT--LVFEHVDQ-DLRTYLDKAPPPGLPAET 121
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
++M L++L+ + ++H DLKP N+L+ L+DFG
Sbjct: 122 IKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFG 165
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 4e-11
Identities = 45/222 (20%), Positives = 87/222 (39%), Gaps = 45/222 (20%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVEC-----EVMKSIRHRNIIK 766
+IGRG FG V ++++ +V A+K+ N+ K + C +V+ + + I
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKW--EMLKRAETACFREERDVLVNGDSKWITT 138
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMID----------V 816
+ + D L+ L ++Y G L L + + +
Sbjct: 139 L--HYAFQDDNNLY--LVMDYYVGGDLLTLL----------SKFEDRLPEEMARFYLAEM 184
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTREDQFVTQTQTPA 874
A++ ++ +H D+KP N+L+ N H L+DFG L + +
Sbjct: 185 VIAIDSVH---QLHYVHRDIKPDNILMDMN--GHIRLADFGSCLKLMEDGTVQSSV-AVG 238
Query: 875 TIGYMA---LEYGSEGRVSTNGDV--YNFGVMLMETFTGKKP 911
T Y++ L+ G+ + ++ GV + E G+ P
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 5e-11
Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 66/303 (21%)
Query: 687 MPQEATW---RRFSYLELCQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVK---VFN 739
MP+ + F L +G G +G V A G VA+K F+
Sbjct: 1 MPKRIVYNISSDFQLKSL------------LGEGAYGVVCSATHKPTGEIVAIKKIEPFD 48
Query: 740 QQ--CGRAFKSFDVECEVMKSIRHRNIIK---IISCCSIGDFKALFKALALEYMPHGSLE 794
+ R + E +++K +H NII I S +F ++ + E M L
Sbjct: 49 KPLFALRTLR----EIKILKHFKHENIITIFNIQRPDSFENFNEVY--IIQELMQ-TDLH 101
Query: 795 KYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854
+ + S+ + D + + A++ L+ + VIH DLKPSN+L+ N + DF
Sbjct: 102 RVI-STQMLSDDHIQY-FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDF 156
Query: 855 GITKLLTR--EDQFVTQTQTPATIGYMALEY------------GSEGRVSTNGDVYNFGV 900
G L R ++ ++ M E+ + + S DV++ G
Sbjct: 157 G----LARIIDESAADNSEPTGQQSGMV-EFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 901 MLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFV 960
+L E F + IF G + + + LL I I+ G+ S D++ + + ++
Sbjct: 212 ILAELFLRRP----IF-PG---RDYRHQLLL--IFGII-GTPHSDNDLRCIESPRAREYI 260
Query: 961 FNM 963
++
Sbjct: 261 KSL 263
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 5e-11
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 39/243 (16%)
Query: 686 DMPQEATWRRFSYLELCQAT----DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVK---- 736
+M + +F +E+ +T + IG G G V A VA+K
Sbjct: 38 NMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR 97
Query: 737 VFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKII----SCCSIGDFKALFKALALEYMP- 789
F Q RA++ E +MK + H+NII ++ ++ +F+ ++ L +E M
Sbjct: 98 PFQNQTHAKRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY--LVMELMDA 151
Query: 790 --HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847
++ L ++Q L +++L+ S +IH DLKPSN+++ +
Sbjct: 152 NLCQVIQMELDHERMSYLLYQMLC-------GIKHLH---SAGIIHRDLKPSNIVVKSDC 201
Query: 848 VAHLSDFGITKLLTR-EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETF 906
+ DFG L R T T Y A E N D+++ G ++ E
Sbjct: 202 TLKILDFG----LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
Query: 907 TGK 909
K
Sbjct: 258 RHK 260
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 5e-11
Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 42/219 (19%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVEC-----EVMKSIRHRNIIK 766
+IGRG FG V R + +V A+K+ ++ K D ++M +++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKF--EMIKRSDSAFFWEERDIMAFANSPWVVQ 133
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVA--------S 818
+ + D + L+ + +EYMP G L + ++ A
Sbjct: 134 L--FYAFQDDRYLY--MVMEYMPGGDLVNLM----------SNYDVPEKWARFYTAEVVL 179
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ--TPATI 876
AL+ ++ S IH D+KP N+LL + L+DFG + +E T TP
Sbjct: 180 ALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD-- 234
Query: 877 GYMALE-YGSEGRVSTNG---DVYNFGVMLMETFTGKKP 911
Y++ E S+G G D ++ GV L E G P
Sbjct: 235 -YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 5e-11
Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 35/185 (18%)
Query: 688 PQEATWRRFSYLELCQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAF 746
Q S + D + +G G +G VYKA VA+K
Sbjct: 16 TQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR------- 68
Query: 747 KSFDVECE-----------VMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEK 795
+ E E ++K ++HRNII++ S I L L EY + L+K
Sbjct: 69 --LEHEEEGVPGTAIREVSLLKELQHRNIIELKSV--IHHNHRLH--LIFEYAEN-DLKK 121
Query: 796 YLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH----- 850
Y+ N + + + + + + + + +S +H DLKP N+LL + +
Sbjct: 122 YM-DKNPDVSMRVIKSFLYQLINGVNFC---HSRRCLHRDLKPQNLLLSVSDASETPVLK 177
Query: 851 LSDFG 855
+ DFG
Sbjct: 178 IGDFG 182
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 6e-11
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 390 SIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVC-RLA 447
+P+ I ++T L YL GN +P L + L ++ +N++ ++ ++ +
Sbjct: 24 VLPKGIPRDVTEL---YLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMT 78
Query: 448 KVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSN 505
++ L LS N+L IP F L SLR LSL N++ V F +L + +L + +N
Sbjct: 79 QLLTLILSYNRLR-CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 5e-09
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 27/127 (21%)
Query: 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511
L L N+ + +P + L + L++N + ++ +F N+ +L L LS N L +
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC-I 93
Query: 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLMSLK 570
P P G+K L+ L L N + +P+ +F DL +L
Sbjct: 94 P-----------------------PRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALS 129
Query: 571 SLNLSNN 577
L + N
Sbjct: 130 HLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 4e-08
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 260 SGSLQSIPYVRLP-NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGN 318
+ L+ +P +P ++ ELYL GN F+ +P + N L+ ++L N S +F N
Sbjct: 19 NKGLKVLP-KGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSN 76
Query: 319 LRNLKRLGLNNNHLTSL 335
+ L L L+ N L +
Sbjct: 77 MTQLLTLILSYNRLRCI 93
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 535 IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYL 593
+P + K L + L N + SF ++ L +L LS N L IP + L L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CIPPRTFDGLKSL 104
Query: 594 KDLNLSFNKLEGEIPKG 610
+ L+L N + +P+G
Sbjct: 105 RLLSLHGNDIS-VVPEG 120
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 43/147 (29%)
Query: 165 GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRN 224
GIP+++ ELYL N +P E+ N ++
Sbjct: 28 GIPRDV------TELYLDGNQFT--------------------------LVPKELSNYKH 55
Query: 225 LEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIP---YVRLPNLEELYLW 280
L ++ L N++ + + F NM+ + + L N L+ IP + L +L L L
Sbjct: 56 LTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYN----RLRCIPPRTFDGLKSLRLLSLH 110
Query: 281 GNHFSGSIPNFIF-NASKLSRLELQKN 306
GN S +P F + S LS L + N
Sbjct: 111 GNDIS-VVPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 426 QVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELI 484
LY N+ +P E+ + +DLSNN++S ++ F ++ L L L+ N L
Sbjct: 34 TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLR 91
Query: 485 SVIPSTFWNLKDILYLNLSSNSL 507
+ P TF LK + L+L N +
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDI 114
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 7e-04
Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 39/147 (26%)
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
+P I ++ L L N F +P LSN +L ++ LS N + + N+T+
Sbjct: 24 VLPKGIPRDV---TELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQ 79
Query: 176 LEELYLSFNGLQ----GAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALG 231
L L LS+N L+ +D L++L +L+L
Sbjct: 80 LLTLILSYNRLRCIPPRTFDG-----------------------------LKSLRLLSLH 110
Query: 232 LNKLVGVIPAEIF-NMSTIQGVGLQNN 257
N + V+P F ++S + + + N
Sbjct: 111 GNDI-SVVPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 8e-04
Identities = 37/157 (23%), Positives = 51/157 (32%), Gaps = 47/157 (29%)
Query: 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNI 100
C T V C N L IP + L+L NQF+ +P + N
Sbjct: 10 CLDTVVRCS---------NKGLKVLPKGIPR------DVTELYLDGNQFT-LVPKELSNY 53
Query: 101 HTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYN 160
L L+ +N++S + SN+ T L L LSYN
Sbjct: 54 KHLTLIDLSNNRIS-TLSNQSFSNM------------------------TQLLTLILSYN 88
Query: 161 DFAGGIPKEI-GNLTKLEELYLSFNGLQ----GAYDH 192
IP L L L L N + GA++
Sbjct: 89 RLRC-IPPRTFDGLKSLRLLSLHGNDISVVPEGAFND 124
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 6e-11
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 35/261 (13%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK---VFNQQ--CGRAFKSFDVECEVMKSIRHRNIIK- 766
IG G +G V A + + VA+K F Q C R + E +++ RH NII
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 767 --IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
II +I K ++ + + M L K L + ++ + + + L+Y++
Sbjct: 91 NDIIRAPTIEQMKDVY--IVQDLME-TDLYKLLKT-QHLSNDHICY-FLYQILRGLKYIH 145
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ-TQTPATIGYMALEY 883
S V+H DLKPSN+LL + DFG+ ++ + T+ AT Y A E
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 884 -GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942
+ + + D+++ G +L E + + IF G KH+++ I+ I+ GS
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR----PIF-PG---KHYLDQLNH--ILGIL-GS- 250
Query: 943 LSREDIQFVAKEQCMSFVFNM 963
S+ED+ + + +++ ++
Sbjct: 251 PSQEDLNCIINLKARNYLLSL 271
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 9e-11
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 55/269 (20%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK----VFNQQ--CGRAFKSFDVECEVMKSIRHRNIIK 766
+G G +G+V A + G +VA+K F + RA++ E ++K +RH N+I
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR----ELRLLKHMRHENVIG 88
Query: 767 II----SCCSIGDFKALFKALALEYMPHGSLEKYLYSSN-------YILDIFQRLNIMID 815
++ ++ DF + L + +M L K + ++ ++Q L
Sbjct: 89 LLDVFTPDETLDDFTDFY--LVMPFMGT-DLGKLMKHEKLGEDRIQFL--VYQMLK---- 139
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPAT 875
L Y++ + +IH DLKP N+ + ++ + DFG L R+ T T
Sbjct: 140 ---GLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG----LARQ-ADSEMTGYVVT 188
Query: 876 IGYMALEY-GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934
Y A E + R + D+++ G ++ E TGK +F +G ++ I
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK----TLF-KG---SDHLDQLKE--I 238
Query: 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNM 963
MK+ G+ E +Q + ++ +++ +
Sbjct: 239 MKVT-GT-PPAEFVQRLQSDEAKNYMKGL 265
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 9e-11
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 30/163 (18%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECE---------- 754
+ F + IG G +G VYKAR G VA+K D E E
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---------LDTETEGVPSTAIREI 53
Query: 755 -VMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-LDIFQRLNI 812
++K + H NI+K++ + L+ L E++ L+K++ +S + + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN--KLY--LVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ + L + + S V+H DLKP N+L+ L+DFG
Sbjct: 109 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFG 148
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 1e-10
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVEC-----EVMKSIRH 761
F + ++G+GGFG V +++ ++ A K ++ R K ++++ +
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKK--RIKKRKGEAMALNEKQILEKVNS 243
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMI---DVAS 818
R ++ + D AL L L M G L+ ++Y + F + ++
Sbjct: 244 RFVVSLAYAYETKD--ALC--LVLTLMNGGDLKFHIY--HMGQAGFPEARAVFYAAEICC 297
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY 878
LE L + +++ DLKP N+LL D+ +SD G+ + + T GY
Sbjct: 298 GLEDL---HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV---GY 351
Query: 879 MALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
MA E R + + D + G +L E G+ P
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 1e-10
Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 35/174 (20%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKAR--IQDGMEVAVKVFNQQCGRAFKSFDVECE----- 754
C+A + IG G +G V+KAR G VA+K E
Sbjct: 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR---------VQTGEEGMPLS 57
Query: 755 ---------VMKSIRHRNIIK---IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY 802
+++ H N+++ + + L L E++ L YL
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT--LVFEHVDQ-DLTTYLDKVPE 114
Query: 803 I-LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
+ ++M + L++L+ S V+H DLKP N+L+ + L+DFG
Sbjct: 115 PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 165
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 2e-10
Identities = 50/226 (22%), Positives = 86/226 (38%), Gaps = 34/226 (15%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVEC-----EVMKSIRHRNIIK 766
+IGRG F V +++ +V A+K+ N+ K +V C +V+ + R I +
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKW--DMLKRGEVSCFREERDVLVNGDRRWITQ 125
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ + D L+ L +EY G L L + + ++ A++ ++
Sbjct: 126 L--HFAFQDENYLY--LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH-- 179
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTREDQFVTQTQTP-ATIGYMALEY 883
+H D+KP N+LL H L+DFG L + ++ T Y++ E
Sbjct: 180 -RLGYVHRDIKPDNILLDRC--GHIRLADFGSCLKLRADGT--VRSLVAVGTPDYLSPEI 234
Query: 884 GSEGRVSTNGDVYN-------FGVMLMETFTGKKP-----TNEIFN 917
Y GV E F G+ P T E +
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 32/216 (14%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK--VFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKII 768
+G GG G V+ A VA+K V A + E ++++ + H NI+K+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR----EIKIIRRLDHDNIVKVF 74
Query: 769 ------------SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDV 816
S+ + +++ + EYM L L + + + M +
Sbjct: 75 EILGPSGSQLTDDVGSLTELNSVY--IVQEYME-TDLANVLEQGPLLEEHAR--LFMYQL 129
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFVTQ-TQTPA 874
L+Y++ S V+H DLKP+N+ + +++V + DFG+ +++ ++
Sbjct: 130 LRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 875 TIGYMALE-YGSEGRVSTNGDVYNFGVMLMETFTGK 909
T Y + S + D++ G + E TGK
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 19/153 (12%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH-RNIIKIISCC 771
IG G FG + + + VA+K+ + +E K + I ++
Sbjct: 17 IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA--PQLHLEYRFYKQLGSGDGIPQVYYFG 74
Query: 772 SIGDFKALFKALALEYMPHG-SLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP 830
G + A+ LE + G SLE + + L I I + S +EY++ S
Sbjct: 75 PCGKYNAM----VLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKN 125
Query: 831 VIHCDLKPSNVLLG-----DNMVAHLSDFGITK 858
+I+ D+KP N L+G V H+ DF + K
Sbjct: 126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 41/195 (21%), Positives = 71/195 (36%), Gaps = 51/195 (26%)
Query: 714 IGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISC-- 770
+G G FG V + + G A+K Q + E ++MK + H NIIK++
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR----ELDIMKVLDHVNIIKLVDYFY 70
Query: 771 ----------------------------------CSIGDFKALFKALALEYMP---HGSL 793
+ K L + +EY+P H L
Sbjct: 71 TTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLN--VIMEYVPDTLHKVL 128
Query: 794 EKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL-GDNMVAHLS 852
+ ++ S I + + + A+ ++ +S + H D+KP N+L+ + L
Sbjct: 129 KSFIRSGRSIPMNLISI-YIYQLFRAVGFI---HSLGICHRDIKPQNLLVNSKDNTLKLC 184
Query: 853 DFGITKLLTREDQFV 867
DFG K L + V
Sbjct: 185 DFGSAKKLIPSEPSV 199
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 2e-10
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 29/156 (18%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKV--------FNQQCGRAFKSFDVECEVMKSIRHRNI 764
+G G + +VYK G+ VA+K R E +MK ++H NI
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-------EISLMKELKHENI 65
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-----LDIFQRLNIMIDVASA 819
+++ + L L E+M + L+KY+ S L++ +
Sbjct: 66 VRLYDVIHTEN--KLT--LVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 820 LEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
L + + ++H DLKP N+L+ L DFG
Sbjct: 121 LAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFG 153
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 8e-10
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 397 NLTNLIGFYLGGNNLNGSIPITL-GKLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDL 454
LT+L YLGGN L S+P + KL L L N+L+ S+P+ V +L ++ +L L
Sbjct: 50 ELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELAL 107
Query: 455 SNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSN 505
+ N+L S+P F L L++L L N+L SV F L + Y+ L N
Sbjct: 108 NTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 226 EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIP---YVRLPNLEELYLWGN 282
L L N L + ++++ + L N LQS+P + +L +L L L N
Sbjct: 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGN----KLQSLPNGVFNKLTSLTYLNLSTN 86
Query: 283 HFSGSIPNFIFNA-SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTS 334
S+PN +F+ ++L L L N F L LK L L N L S
Sbjct: 87 QLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS 138
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 1e-08
Identities = 47/160 (29%), Positives = 65/160 (40%), Gaps = 32/160 (20%)
Query: 453 DLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLP 512
+ + + S+P G A L L +N L S+ F L + L L N L
Sbjct: 13 ECYSQGRT-SVPT--GIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS--- 66
Query: 513 LEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGDLMSLKS 571
L G L L +L L N LQ S+P+ F L LK
Sbjct: 67 LPNGVFNKLTS---------------------LTYLNLSTNQLQ-SLPNGVFDKLTQLKE 104
Query: 572 LNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNKLEGEIPKG 610
L L+ N L S+P + +KL+ LKDL L N+L+ +P G
Sbjct: 105 LALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKS-VPDG 142
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 44/158 (27%), Positives = 64/158 (40%), Gaps = 36/158 (22%)
Query: 426 QVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELI 484
L N L+ L + QL L NKL S+P F L SL L+L++N+L
Sbjct: 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ 89
Query: 485 SVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKD 544
S+ F L + L L++N L +P+ G+ D
Sbjct: 90 SLPNGVFDKLTQLKELALNTNQLQ-------------------------SLPD---GVFD 121
Query: 545 ----LQFLFLEYNILQGSIPD-SFGDLMSLKSLNLSNN 577
L+ L L N L+ S+PD F L SL+ + L +N
Sbjct: 122 KLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 42/175 (24%), Positives = 64/175 (36%), Gaps = 50/175 (28%)
Query: 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ----GAYDHGFLQ 196
GIP L L N LT L +LYL N LQ G ++
Sbjct: 25 GIP------AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNK---- 74
Query: 197 IFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMST-IQGVGLQ 255
L +L L L N+L +P +F+ T ++ + L
Sbjct: 75 -------------------------LTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALN 108
Query: 256 NNSLSGSLQSIP---YVRLPNLEELYLWGNHFSGSIPNFIF-NASKLSRLELQKN 306
N LQS+P + +L L++L L+ N S+P+ +F + L + L N
Sbjct: 109 TN----QLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 41/175 (23%), Positives = 55/175 (31%), Gaps = 33/175 (18%)
Query: 260 SGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNL 319
S S+P L L N + L++L L N F L
Sbjct: 16 SQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKL 75
Query: 320 RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKI 379
+L L L+ N L S L L+ K L L++N L G +
Sbjct: 76 TSLTYLNLSTNQLQS--LPNGVFDKLTQLKEL---ALNTNQ----LQSLPDG-------V 119
Query: 380 FDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDN 433
FD LT L L N L S+P +L LQ ++ DN
Sbjct: 120 FD---------------KLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 384 DCNVSG--SIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPD 441
+C G S+P I T + L N+L +L L LY NKL+ S+P+
Sbjct: 13 ECYSQGRTSVPTGIPAQTTYL--DLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPN 69
Query: 442 EVC-RLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILY 499
V +L + L+LS N+L S+P F L L+ L+L +N+L S+ F L +
Sbjct: 70 GVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKD 128
Query: 500 LNLSSNSL 507
L L N L
Sbjct: 129 LRLYQNQL 136
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 8e-05
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 46/168 (27%)
Query: 41 CNWTGVTCDVHSHRVTA-----------LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQF 89
C+ T V C +S T+ L++ SL L+SL L+L N+
Sbjct: 7 CSGTTVEC--YSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKL 64
Query: 90 SGSIPFSIFNIHT-LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSN 148
S+P +FN T L L+ NQL +P + F+ L
Sbjct: 65 Q-SLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGV------FDKL----------------- 99
Query: 149 CTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQ----GAYD 191
T L+ L L+ N +P + LT+L++L L N L+ G +D
Sbjct: 100 -TQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFD 145
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 8e-10
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH-RNIIKIISCC 771
IG G FG +Y I G EVA+K+ + +E ++ K ++ I I C
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCG 74
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ GD+ + +E + SLE + + L + + S +EY++ S
Sbjct: 75 AEGDYNVM----VMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNF 126
Query: 832 IHCDLKPSNVLLG---DNMVAHLSDFGITK 858
IH D+KP N L+G + ++ DFG+ K
Sbjct: 127 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 42/127 (33%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 384 DCNVSG--SIPEEI-GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIP 440
CN G S+P I + T L L N L KL +L L N+++ S+P
Sbjct: 13 RCNSKGLTSVPTGIPSSATRL---ELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLP 68
Query: 441 DEVC-RLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498
D V +L K+ L L NKL S+P F L L+ L+L +N+L SV F L +
Sbjct: 69 DGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQ 127
Query: 499 YLNLSSN 505
+ L +N
Sbjct: 128 KIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 17/108 (15%)
Query: 398 LTNLIGFYLGGNNLNGSIPITL-GKLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDLS 455
LT L L N + S+P + KL KL +LY +NKL+ S+P+ V +L ++ +L L
Sbjct: 51 LTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALD 108
Query: 456 NNKLSGSIP-ACFGDLASLRNLSLASNELISVIPSTFWN--LKDILYL 500
N+L S+P F L SL+ + L +N P W+ I YL
Sbjct: 109 TNQLK-SVPDGIFDRLTSLQKIWLHTN------P---WDCSCPRIDYL 146
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511
L+L +NKL F L L LSL+ N++ S+ F L + L L N L L
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQS-L 91
Query: 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLMSLK 570
P +GV + L+ L L+ N L+ S+PD F L SL+
Sbjct: 92 P-------------------NGVFDK----LTQLKELALDTNQLK-SVPDGIFDRLTSLQ 127
Query: 571 SLNLSNN 577
+ L N
Sbjct: 128 KIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 544 DLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNK 602
L LE N LQ F L L L+LS N + S+P + +KL+ L L L NK
Sbjct: 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENK 87
Query: 603 LEGEIPKG 610
L+ +P G
Sbjct: 88 LQ-SLPNG 94
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 426 QVLYFPDNKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNEL 483
L NKL+ S+P V +L ++ +L LS N++ S+P F L L L L N+L
Sbjct: 31 TRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKL 88
Query: 484 ISVIPSTFWNLKDILYLNLSSNSL 507
S+ F L + L L +N L
Sbjct: 89 QSLPNGVFDKLTQLKELALDTNQL 112
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 34/146 (23%)
Query: 453 DLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLP 512
++ L+ S+P G +S L L SN+L S+ F L + L+LS N +
Sbjct: 13 RCNSKGLT-SVPT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS--- 66
Query: 513 LEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGDLMSLKS 571
L G L K L L+L N LQ S+P+ F L LK
Sbjct: 67 LPDGVFDKLTK---------------------LTILYLHENKLQ-SLPNGVFDKLTQLKE 104
Query: 572 LNLSNNNLSGSIPV----SLEKLSYL 593
L L N L S+P L L +
Sbjct: 105 LALDTNQLK-SVPDGIFDRLTSLQKI 129
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 523 KIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGDLMSLKSLNLSNNNLSG 581
+++ N + + L L L N +Q S+PD F L L L L N L
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQ- 89
Query: 582 SIPVSL-EKLSYLKDLNLSFNKLEGEIPKG 610
S+P + +KL+ LK+L L N+L+ +P G
Sbjct: 90 SLPNGVFDKLTQLKELALDTNQLKS-VPDG 118
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 260 SGSLQSIPYVRLP-NLEELYLWGNHFSGSIPNFIFNA-SKLSRLELQKNSFSGFIPSTFG 317
S L S+P +P + L L N S+P+ +F+ ++L++L L +N F
Sbjct: 16 SKGLTSVP-TGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFD 73
Query: 318 NLRNLKRLGLNNNHLTSL 335
L L L L+ N L SL
Sbjct: 74 KLTKLTILYLHENKLQSL 91
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 1e-09
Identities = 63/414 (15%), Positives = 130/414 (31%), Gaps = 41/414 (9%)
Query: 51 HSHRVTALNISHLSLSGTIPSRL--GNLSSLQSLFLHS-NQFSGSIPFSIF-NIHTLKLL 106
+ ++ +++ + +S RL L++L L + F+ SI + +K L
Sbjct: 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTL 169
Query: 107 SFGDN---QLSGEIPTNICSNLPFFESLNLSKNMFHG----GIPSALSNCTYLRILRLSY 159
++ + G+ + + E LN F + + NC L +++
Sbjct: 170 LMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGD 229
Query: 160 NDFA--GGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPN 217
+ G K NL + S N G + +F + + E+P
Sbjct: 230 FEILELVGFFKAAANLEEFCGG--SLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPI 287
Query: 218 EIGNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEE 276
+ L L L + ++ + +N L+ + L+
Sbjct: 288 LFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLA-QYCKQLKR 346
Query: 277 LYLWGNHFSGSIPNFIF------------NASKLSRLELQKNSFSGF----IPSTFGNLR 320
L + + + +L + + + + I + NL
Sbjct: 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLC 406
Query: 321 NLKRLGLNN-NHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSV---GNLSHS 376
+ + + L+ +T L L+ S L CK L G L+ + G S +
Sbjct: 407 DFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQ--GGLTDLGLSYIGQYSPN 464
Query: 377 LKIFDMSDCNVS-GSIPEEIGNLTNLIGFYLGGNNL-NGSIPITLGKLQKLQVL 428
++ + S + E NL + G +I + KL L+ L
Sbjct: 465 VRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYL 518
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 54.2 bits (130), Expect = 2e-07
Identities = 47/340 (13%), Positives = 96/340 (28%), Gaps = 36/340 (10%)
Query: 37 SISFC-NWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSG--SI 93
+ V + + L+ +P + NL + L + G +
Sbjct: 226 KVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEM 285
Query: 94 PFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLR 153
P ++ L L E + P E L + G+ C L+
Sbjct: 286 PILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLK 345
Query: 154 ILRLSYNDFAGGIPKEIGNLT------------KLEELYLSFNGLQGAYDHGFLQIFVKN 201
LR+ G+ E G ++ +LE + + + + + I
Sbjct: 346 RLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDIT---NESLESI---- 398
Query: 202 IFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSG 261
+ R + L L+ V + + ++
Sbjct: 399 -----GTYLKNLCDFRLVLLDREERITDLPLDNGVRSL---LIGCKKLRRFAFYLRQGGL 450
Query: 262 SLQSIPYV--RLPNLEELYLWGNHFS-GSIPNFIFNASKLSRLELQKNSFS-GFIPSTFG 317
+ + Y+ PN+ + L S + F L +LE++ FS I +
Sbjct: 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVT 510
Query: 318 NLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357
L +L+ L + + +L + +E I
Sbjct: 511 KLPSLRYLWVQGYRASMTGQDL--MQMARPYWNIELIPSR 548
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 1e-06
Identities = 29/370 (7%), Positives = 95/370 (25%), Gaps = 38/370 (10%)
Query: 37 SISFCNWTGVTCDV------HSHRVTALNISHLSLS--GTIPSRLGNLSSLQSLFLHSNQ 88
+ + ++ + + ++ + + NL L+ +
Sbjct: 198 NFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDI 257
Query: 89 FSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHG-GIPSALS 147
++ L L + + + L+L + + +
Sbjct: 258 GMPEKYMNLVFPRKLCRLGL--SYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQ 315
Query: 148 NCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIF---VKNIFV 204
C L +L G+ +L+ L + + + + + +
Sbjct: 316 KCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQ 375
Query: 205 QFSH----NFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260
+I NE +LE + L L + + + + + L
Sbjct: 376 GCQELEYMAVYVSDITNE-----SLESIGTYLKNLCDF---RLVLLDREERIT--DLPLD 425
Query: 261 GSLQSIPYVRLPNLEELYLWGNHFS---GSIPNFIFNASKLSRLELQKNSFSGF-IPSTF 316
++S+ + L + + + + + L S +
Sbjct: 426 NGVRSL-LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFS 484
Query: 317 GNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI-DGILSRKSVGNLSH 375
NL++L + + + ++++ L ++ + +
Sbjct: 485 RGCPNLQKLEMRGCCFSERAIA----AAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYW 540
Query: 376 SLKIFDMSDC 385
++++
Sbjct: 541 NIELIPSRRV 550
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 1e-09
Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 25/166 (15%)
Query: 713 LIGRGGFGSVYKAR------IQDGMEVAVKVFNQQCGR-----------AFKSFDVECEV 755
IG+GGFG +Y A + VKV G A +
Sbjct: 42 PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIR 101
Query: 756 MKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHG-SLEKYLYSSNYILDIFQRLNIMI 814
+ +++ + K ++ + ++ G L+K ++ L + +
Sbjct: 102 TRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRFSRKTVLQLSL 159
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLG--DNMVAHLSDFGITK 858
+ LEY+ + +H D+K SN+LL + +L D+G+
Sbjct: 160 RILDILEYI---HEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAY 202
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 29/153 (18%), Positives = 59/153 (38%), Gaps = 19/153 (12%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH-RNIIKIISCC 771
IG G FG +++ + + +VA+K ++ E K + I +
Sbjct: 18 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYFG 75
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
G L ++ + SLE L + + + ++ ++ +
Sbjct: 76 QEGLHNVL----VIDLLGP-SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSL 127
Query: 832 IHCDLKPSNVLLG------DNMVAHLSDFGITK 858
++ D+KP N L+G NM+ ++ DFG+ K
Sbjct: 128 VYRDIKPDNFLIGRPNSKNANMI-YVVDFGMVK 159
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 3e-09
Identities = 41/154 (26%), Positives = 61/154 (39%), Gaps = 29/154 (18%)
Query: 426 QVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELI 484
Q+LY DN++ P L + +L L +N+L ++P F L L L L +N+L
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 485 SVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKD 544
+ + F L + L + N LT +P I +
Sbjct: 102 VLPSAVFDRLVHLKELFMCCNKLTE-------------------------LPRGIERLTH 136
Query: 545 LQFLFLEYNILQGSIPD-SFGDLMSLKSLNLSNN 577
L L L+ N L+ SIP +F L SL L N
Sbjct: 137 LTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 3e-09
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)
Query: 462 SIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVL 521
S+PA G + + L L N++ + P F +L ++ L L SN L LP
Sbjct: 33 SVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-LP--------- 80
Query: 522 VKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS-FGDLMSLKSLNLSNNNLS 580
GV + + L L L N L +P + F L+ LK L + N L+
Sbjct: 81 ----------VGVFDS----LTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT 125
Query: 581 GSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610
+P +E+L++L L L N+L+ IP G
Sbjct: 126 -ELPRGIERLTHLTHLALDQNQLKS-IPHG 153
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 9e-09
Identities = 41/199 (20%), Positives = 57/199 (28%), Gaps = 58/199 (29%)
Query: 260 SGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNL 319
S S+P N + LYL N + P + L L L N F +L
Sbjct: 28 SKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSL 87
Query: 320 RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKI 379
L L L N LT L +
Sbjct: 88 TQLTVLDLGTNQLTVL----------------------------------------PSAV 107
Query: 380 FDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSI 439
FD L +L ++ N L +P + +L L L N+L+ SI
Sbjct: 108 FD---------------RLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SI 150
Query: 440 PDEVC-RLAKVYQLDLSNN 457
P RL+ + L N
Sbjct: 151 PHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 47/194 (24%), Positives = 66/194 (34%), Gaps = 65/194 (33%)
Query: 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ----GAYDHGFLQ 196
GIP T +IL L N P +L L+ELYL N L G +D
Sbjct: 37 GIP------TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDS---- 86
Query: 197 IFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQN 256
L L VL LG N+L V+P+ +F+
Sbjct: 87 -------------------------LTQLTVLDLGTNQLT-VLPSAVFD----------- 109
Query: 257 NSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTF 316
RL +L+EL++ N + +P I + L+ L L +N F
Sbjct: 110 -------------RLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAF 155
Query: 317 GNLRNLKRLGLNNN 330
L +L L N
Sbjct: 156 DRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 51/219 (23%), Positives = 76/219 (34%), Gaps = 70/219 (31%)
Query: 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNI 100
C+ T V C S R + +P+ G ++ Q L+LH NQ + + +F+
Sbjct: 19 CSGTTVDC--RSKRHAS-----------VPA--GIPTNAQILYLHDNQIT-KLEPGVFDS 62
Query: 101 HT-LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSY 159
LK L G NQL LP G+ +L+ L +L L
Sbjct: 63 LINLKELYLGSNQLG---------ALP-------------VGVFDSLTQ---LTVLDLGT 97
Query: 160 NDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI 219
N L L+EL++ N L E+P I
Sbjct: 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT--------------------------ELPRGI 131
Query: 220 GNLRNLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNN 257
L +L LAL N+L + P F +S++ L N
Sbjct: 132 ERLTHLTHLALDQNQLKSI-PHGAFDRLSSLTHAYLFGN 169
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 3e-09
Identities = 40/247 (16%), Positives = 89/247 (36%), Gaps = 38/247 (15%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR--------HRN 763
+G G F +V+ A+ + + VA+K+ ++ + E ++++ +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMG 84
Query: 764 IIKIISCCSIGDFKALFKA---LALEYMPHGSLEKYLYSSNYI---LDIFQRLNIMIDVA 817
I+ + K + E + +L + + L ++ I +
Sbjct: 85 ANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQ--ISKQLL 141
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH------LSDFGITKLLTREDQFVTQT- 870
L+Y++ +IH D+KP NVL+ ++D G D+ T +
Sbjct: 142 LGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYDEHYTNSI 196
Query: 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930
QT Y + E D+++ ++ E TG +F + +D
Sbjct: 197 QTRE---YRSPEVLLGAPWGCGADIWSTACLIFELITGDF----LFEPDEGHSYTKDDDH 249
Query: 931 LISIMKI 937
+ I+++
Sbjct: 250 IAQIIEL 256
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-09
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 34/157 (21%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVK----VFNQQ--CGRAFKSFDVECEVMKSIR-HRNII 765
+G+G +G V+K+ + G VAVK F R F+ E ++ + H NI+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR----EIMILTELSGHENIV 72
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN-------YILDIFQRLNIMIDVAS 818
+++ + + ++ L +YM L + ++ Y+ ++Q +
Sbjct: 73 NLLNVLRADNDRDVY--LVFDYMET-DLHAVIRANILEPVHKQYV--VYQLIK------- 120
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855
++YL+ S ++H D+KPSN+LL ++DFG
Sbjct: 121 VIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFG 154
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 5e-09
Identities = 53/359 (14%), Positives = 103/359 (28%), Gaps = 39/359 (10%)
Query: 59 NISHLSLSGTIPSR-----LGNLSSLQSLFLHS------NQFSGSIPFSIFNIHTLKLLS 107
N+ L L+ +P L L+ L + ++ L+ LS
Sbjct: 212 NLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLS 271
Query: 108 FGDNQLSGEIPTNICSNLPFFESLNLSK-NMFHGGIPSALSNCTYLRILRLSYNDFAGGI 166
G + S +LNLS + + L C L+ L + G+
Sbjct: 272 -GFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGL 330
Query: 167 PKEIGNLTKLEELYLSF-NGLQGAYDHGFLQIFVKNIFVQFS---HNFSKCEIPNEIGNL 222
L EL + + + + ++ + C ++ N
Sbjct: 331 EVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFC---RQMTN- 386
Query: 223 RNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYV--RLPNLEELYLW 280
L +A + F + I+ +L + +L L L
Sbjct: 387 AALITIARNRPNM------TRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLS 440
Query: 281 GNHFSGSIPNFIFNASKLSRLELQKNSFSGF-IPSTFGNLRNLKRLGLNNNHLTSLTLEL 339
G A K+ L + S + +L++L + + L
Sbjct: 441 GLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL-- 498
Query: 340 SFLSSLSNCKYLEFIDLSSNSI--DGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIG 396
L++ S + + + +SS S+ K +G L + + + S PE
Sbjct: 499 --LANASKLETMRSLWMSSCSVSFGAC---KLLGQKMPKLNVEVIDERGAPDSRPESCP 552
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 58.8 bits (142), Expect = 6e-09
Identities = 55/405 (13%), Positives = 128/405 (31%), Gaps = 59/405 (14%)
Query: 59 NISHLSLSG-------TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNI----HTLKLLS 107
N L LS + + +L+ L L + + + +L L+
Sbjct: 131 NFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLN 190
Query: 108 FGD--NQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSY------ 159
+++S + + P +SL L++ + + + L L L
Sbjct: 191 ISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVR 250
Query: 160 NDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE- 218
D G+ + +L L +G A ++ + + N S + +
Sbjct: 251 PDVYSGLSVALSGCKELRCL----SGFWDAVPAYLPAVYSVCSRLT-TLNLSYATVQSYD 305
Query: 219 ----IGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNL 274
+ L+ L + + I+ GL+ L+ + + + +R+
Sbjct: 306 LVKLLCQCPKLQRLWV---------------LDYIEDAGLE--VLASTCKDLRELRVFPS 348
Query: 275 EELYLWGNHFSG--SIPNFIFNASKLSRLELQKNSFSG----FIPSTFGNLRNLKRLGLN 328
E + N + + KL + + I N+ + +
Sbjct: 349 EPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIE 408
Query: 329 NNHLTSLTLEL---SFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDC 385
LTLE F + + +CK L + LS D + + +G + +++ ++
Sbjct: 409 PKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVF--EYIGTYAKKMEMLSVAFA 466
Query: 386 NVSG-SIPEEIGNLTNLIGFYLGG-NNLNGSIPITLGKLQKLQVL 428
S + + +L + + ++ KL+ ++ L
Sbjct: 467 GDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSL 511
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 4e-08
Identities = 67/516 (12%), Positives = 145/516 (28%), Gaps = 94/516 (18%)
Query: 53 HRVTALNISHLSLSGTIPSRLGNLSS----LQSLFLHSNQFSGSIPFSIFNIHTLKLLSF 108
+ + + + + ++S+ L + L+
Sbjct: 38 YEIERWCRRKVFIGNCYAVSPATVIRRFPKVRSVELKGKP----------HFADFNLVPD 87
Query: 109 GDNQLSGEIPTNICSNLPFFESLNLS---------------------------KNMFHGG 141
G + S+ + E + L + G
Sbjct: 88 GWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDG 147
Query: 142 IPSALSNCTYLRILRLSYNDFAG----GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQI 197
+ + + C L+ L L +D + T L L +S L L+
Sbjct: 148 LAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNIS--CLASEVSFSALER 205
Query: 198 FVKN----IFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVG 253
V ++ + ++ + LE LG + ++++ ++ G
Sbjct: 206 LVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEE--LGTGGYTAEVRPDVYSGLSVALSG 263
Query: 254 LQN-NSLSG-------SLQSIPYVRLPNLEELYLWGNHFSG-SIPNFIFNASKLSRLELQ 304
+ LSG L ++ Y L L L + + KL RL +
Sbjct: 264 CKELRCLSGFWDAVPAYLPAV-YSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVL 322
Query: 305 KNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSF----LSSLS-NCKYLEFIDLSSN 359
+ ++L+ L + + + ++ L S+S C LE +
Sbjct: 323 DYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCR 382
Query: 360 SIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITL 419
+ + ++ ++ F + YL L+ +
Sbjct: 383 QM-TNAALITIARNRPNMTRFRLCIIEPKAP-------------DYLTLEPLDIGFGAIV 428
Query: 420 GKLQKLQVLYFPDNKLEGSIPDEV-----CRLAKVYQLDLSNNKLSG-SIPACFGDLASL 473
+ L+ L L G + D+V K+ L ++ S + SL
Sbjct: 429 EHCKDLRRLS-----LSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSL 483
Query: 474 RNLSLASNELIS-VIPSTFWNLKDILYLNLSSNSLT 508
R L + + + L+ + L +SS S++
Sbjct: 484 RKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 8e-04
Identities = 42/340 (12%), Positives = 95/340 (27%), Gaps = 67/340 (19%)
Query: 270 RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLR--NLKRLGL 327
R P + + L G P+F + + S++ L LKR+ +
Sbjct: 64 RFPKVRSVELKGK------PHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVV 117
Query: 328 NNNHLTSLTLELSFLSSL--SNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDC 385
++ L + L S+C+ S++ + I + +LK D+ +
Sbjct: 118 TDDCLELIAKSFKNFKVLVLSSCE-----GFSTDGLAAIAAT------CRNLKELDLRES 166
Query: 386 NVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCR 445
+V + + + L L + ++ V R
Sbjct: 167 DVDDVSGHWLSHFPDT-----------------YTSLVSLNISCLASEVSFSALERLVTR 209
Query: 446 LAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLAS------NELISVIPSTFWNLKDILY 499
+ L L+ + L L ++ S + K++
Sbjct: 210 CPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRC 269
Query: 500 LNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSI 559
L+ +++ LP L ++ S ++ V + +
Sbjct: 270 LSGFWDAVPAYLPAVYSVCSRLTTLNLS---YATVQSYDLVKL----------------- 309
Query: 560 PDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLS 599
L+ L + + + V L++L +
Sbjct: 310 ---LCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVF 346
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 58.0 bits (139), Expect = 6e-09
Identities = 38/198 (19%), Positives = 59/198 (29%), Gaps = 50/198 (25%)
Query: 702 CQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKV--------FNQQCGRAFKSFDVEC 753
C T+ IG G FG V++ D VA+K+ N + F+ E
Sbjct: 16 CLPTEKLQRCEKIGEGVFGEVFQTI-ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEI 74
Query: 754 EVMKSI---------RHRNIIKIISCC----------------------SIGDFKALFKA 782
+ K + R I + S S D FK
Sbjct: 75 IISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKD 134
Query: 783 ----LALEYMPHG-SLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLK 837
+ LE+ G LE+ + + +I+ + ++L H DL
Sbjct: 135 DQLFIVLEFEFGGIDLEQMRTK---LSSLATAKSILHQLTASLAVAEASLR--FEHRDLH 189
Query: 838 PSNVLLGDNMVAHLSDFG 855
NVLL + L
Sbjct: 190 WGNVLLKKTSLKKLHYTL 207
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 7e-09
Identities = 50/330 (15%), Positives = 101/330 (30%), Gaps = 67/330 (20%)
Query: 101 HTLKLLSFGDNQLSGEIPTNICSNLPFF----ESLNLSKNMFH----GGIPSAL-SNCTY 151
H + L N L + SLNLS N + L +
Sbjct: 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81
Query: 152 LRILRLSYNDFAGGIPKEIGNL-----TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQF 206
+ L LS N + E+ + L L +N F
Sbjct: 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFS---SKS-----SSEFKQAF 133
Query: 207 SHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIF------NMSTIQGVGLQNNS-- 258
S+ + ++ L L N L G+ ++ + + + L+ N+
Sbjct: 134 SNLPA------------SITSLNLRGNDL-GIKSSDELIQILAAIPANVNSLNLRGNNLA 180
Query: 259 ------LSGSLQSIPYVRLPNLEELYLWGNHFSGS-----IPNFIFNASKLSRLELQKNS 307
L+ L SIP ++ L L N F + + L L N
Sbjct: 181 SKNCAELAKFLASIP----ASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNC 236
Query: 308 FSG----FIPSTFGNLRNLKRLGLNNNHLTSLTLEL--SFLSSLSNCKYLEFIDLSSNSI 361
G + +L++L+ + L+ + + +++ E + ++ N + + +D + I
Sbjct: 237 LHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEI 296
Query: 362 --DGILS-RKSVGNLSHSLKIFDMSDCNVS 388
+ + LS + + + +
Sbjct: 297 HPSHSIPISNLIRELSGKADVPSLLNQCLI 326
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 57/398 (14%), Positives = 108/398 (27%), Gaps = 87/398 (21%)
Query: 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEIG-----NLTKLEELYLSFNGLQGAYDHGFL 195
+ S + L LS N+ E+ + L LS N L
Sbjct: 13 PVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLG---FKN-- 67
Query: 196 QIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQ 255
+ + + N+ L L N L + +
Sbjct: 68 ---SDELVQILAAIPA------------NVTSLNLSGNFL------------SYKSS--- 97
Query: 256 NNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA-----SKLSRLELQKNSFS- 309
+ L +L +IP+ + L L N FS + A + ++ L L+ N
Sbjct: 98 -DELVKTLAAIPF----TITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152
Query: 310 ----GFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL--SNCKYLEFIDLSSNSIDG 363
I N+ L L N+L S L+ S + +DLS+N +
Sbjct: 153 KSSDELIQILAAIPANVNSLNLRGNNLASKNCA--ELAKFLASIPASVTSLDLSANLLGL 210
Query: 364 ILSRKSVGNLSH---SLKIFDMSDCNVSGSIPEEIGNL----TNLIGFYLGGNNLNG--- 413
+ S + ++ + G E + L +L YL + +
Sbjct: 211 KSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSK 270
Query: 414 ----SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGD 469
++ +QK+ ++ ++ S + L + L C
Sbjct: 271 EQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSLLNQ---CLIF 327
Query: 470 LASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507
+ N ++ + L
Sbjct: 328 AQKHQTNIEDLN-----------IPDELRESIQTCKPL 354
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 53/342 (15%), Positives = 111/342 (32%), Gaps = 61/342 (17%)
Query: 318 NLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSR---KSVGNLS 374
+ L L+ N+L S++ + + + ++LS NS+ S + + +
Sbjct: 20 IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIP 79
Query: 375 HSLKIFDMSDCNVSGSIPEEIGNL-----TNLIGFYLGGNNLNGSIPITLGKL-----QK 424
++ ++S +S +E+ + LG N+ + +
Sbjct: 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPAS 139
Query: 425 LQVLYFPDNKL--EG------SIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLA----- 471
+ L N L + + + L+L N L+ +LA
Sbjct: 140 ITSLNLRGNDLGIKSSDELIQILAAIPANVNS---LNLRGNNLA---SKNCAELAKFLAS 193
Query: 472 ---SLRNLSLASNEL----ISVIPSTFWNLKDIL-YLNLSSNSLTGP----LPLEIGNLK 519
S+ +L L++N L + + F ++ + + LNL N L GP L L +LK
Sbjct: 194 IPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLK 253
Query: 520 VLVKIDFSMNNFSGV-------IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM----- 567
L + + + + A I+ + + + S +L+
Sbjct: 254 HLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELSG 313
Query: 568 SLKSLNLSNNNLS-----GSIPVSLEKLSYLKDLNLSFNKLE 604
+L N L + L L++ + L
Sbjct: 314 KADVPSLLNQCLIFAQKHQTNIEDLNIPDELRESIQTCKPLL 355
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 50/305 (16%), Positives = 97/305 (31%), Gaps = 66/305 (21%)
Query: 345 LSNCKYLEFIDLSSNSI--DGILS-RKSVGNLSHSLKIFDMSDCNVSGSIPEEIG----- 396
S + +DLS N++ + ++ N S+ ++S ++ +E+
Sbjct: 18 TSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAA 77
Query: 397 NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSN 456
N+ L GN L+ L K L + LDL
Sbjct: 78 IPANVTSLNLSGNFLSYKSSDELVK-----TLAAIPFTIT--------------VLDLGW 118
Query: 457 NKLSGSIPACFGDL-----ASLRNLSLASN--------ELISVIPSTFWNLKDILYLNLS 503
N S + F AS+ +L+L N ELI ++ + N+ LNL
Sbjct: 119 NDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVN---SLNLR 175
Query: 504 SNSLTGP------LPLEIGNLKVLVKIDFSMNNF--SGV--IPNAIGGIKD-LQFLFLEY 552
N+L L + +D S N + I + + L L
Sbjct: 176 GNNLASKNCAELAKFLASIP-ASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCL 234
Query: 553 NILQGS----IPDSFGDLMSLKSLNLSNNNLSG-------SIPVSLEKLSYLKDLNLSFN 601
N L G + L L+++ L + + ++ + + + ++ +
Sbjct: 235 NCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGK 294
Query: 602 KLEGE 606
++
Sbjct: 295 EIHPS 299
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 57.7 bits (139), Expect = 1e-08
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCC 771
IG G FG +Y IQ EVA+K+ N + E ++ + ++ I +
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFG 72
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
GD+ L ++ + SLE + L + L + + + +E+++ S
Sbjct: 73 VEGDYNVL----VMDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSF 124
Query: 832 IHCDLKPSNVLLGDNMVAH---LSDFGITK 858
+H D+KP N L+G A+ + DFG+ K
Sbjct: 125 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVEC-----EVMKSIRHRNIIK 766
+G G FG V + ++ A+K+ ++Q + K +E +++++ ++K
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ D L+ + +EY+ G + +L + R + EYL+
Sbjct: 106 LEFSFK--DNSNLY--MVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ--TPATIGYMALEYG 884
S +I+ DLKP N+L+ ++DFG K + T T TP +A E
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPE---ALAPEI- 209
Query: 885 SEGRVSTNG-----DVYNFGVMLMETFTGKKP-----TNEIFN 917
+ + G D + GV++ E G P +I+
Sbjct: 210 ----ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE 248
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 1e-08
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF-NASK 297
IP +I + L +N L + RLP+L +L L N + I F AS
Sbjct: 23 IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASH 79
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSF--LSSLSNCKYLEFID 355
+ L+L +N F L LK L L +N ++ + SF L+SL++ ++
Sbjct: 80 IQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVM-PGSFEHLNSLTS------LN 132
Query: 356 LSSN 359
L+SN
Sbjct: 133 LASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 260 SGSLQSIPYVRLP-NLEELYLWGNHFSGSIPNFIFNA-SKLSRLELQKNSFSGFIPSTFG 317
L+ IP +P + EL L N + +F L +LEL++N +G P+ F
Sbjct: 17 GRGLKEIP-RDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE 75
Query: 318 NLRNLKRLGLNNNHLTSL 335
+++ L L N + +
Sbjct: 76 GASHIQELQLGENKIKEI 93
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 43/152 (28%), Positives = 58/152 (38%), Gaps = 32/152 (21%)
Query: 453 DLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSLTGPL 511
D + L IP L L NEL + F L ++ L L N LTG +
Sbjct: 14 DCTGRGLK-EIPR--DIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-I 69
Query: 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLMSLK 570
PNA G +Q L L N ++ I + F L LK
Sbjct: 70 E-----------------------PNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLK 105
Query: 571 SLNLSNNNLSGSIPV-SLEKLSYLKDLNLSFN 601
+LNL +N +S + S E L+ L LNL+ N
Sbjct: 106 TLNLYDNQIS-CVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 397 NLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDL 454
L +L+ L N L I +Q L +NK++ I +++ L ++ L+L
Sbjct: 52 RLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLNL 109
Query: 455 SNNKLSGSIP-ACFGDLASLRNLSLASN 481
+N++S + F L SL +L+LASN
Sbjct: 110 YDNQIS-CVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 426 QVLYFPDNKLEGSIPDEV-CRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNEL 483
L DN+L D + RL + +L+L N+L+ I F + ++ L L N++
Sbjct: 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGENKI 90
Query: 484 ISVIPSTFWNLKDILYLNLSSNSLT 508
+ F L + LNL N ++
Sbjct: 91 KEISNKMFLGLHQLKTLNLYDNQIS 115
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 523 KIDFSMNNFSGVIPNAI-GGIKDLQFLFLEYNILQGSIPDS-FGDLMSLKSLNLSNNNLS 580
++ + N + + + G + L L L+ N L I + F ++ L L N +
Sbjct: 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGENKIK 91
Query: 581 GSIPVSL-EKLSYLKDLNLSFNKLEGEIPKG 610
I + L LK LNL N++ + G
Sbjct: 92 -EISNKMFLGLHQLKTLNLYDNQISC-VMPG 120
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 49/153 (32%)
Query: 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEI-GNLTKLEELYLSFNGLQ----GAYDHGFL 195
IP + L L+ N+ + G L L +L L N L A++
Sbjct: 26 DIP------LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG--- 76
Query: 196 QIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFN-MSTIQGVGL 254
+++ L LG NK+ I ++F + ++ + L
Sbjct: 77 --------------------------ASHIQELQLGENKI-KEISNKMFLGLHQLKTLNL 109
Query: 255 QNNSLSGSLQSIP---YVRLPNLEELYLWGNHF 284
+N + + + L +L L L N F
Sbjct: 110 YDN----QISCVMPGSFEHLNSLTSLNLASNPF 138
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 9e-05
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 544 DLQFLFLEYNILQGSIPD-SFGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFN 601
L L N L D FG L L L L N L+ I + E S++++L L N
Sbjct: 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGEN 88
Query: 602 KLEGEIPKG 610
K++ EI
Sbjct: 89 KIK-EISNK 96
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 33/169 (19%)
Query: 714 IGRGGFGSVYKAR---------IQDGMEVAVKV-------FNQQ--CGRAFKSFDVECEV 755
R G +Y+A + ++K+ FN+Q RA K V
Sbjct: 50 QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109
Query: 756 -MKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHG-SLEKYL-YSSNYILDIFQRLNI 812
+ S I + G + ++ L L + G SL+ L S ++L L +
Sbjct: 110 KLYSTPLLAIPTCMGF---GVHQDKYRFLVLPSL--GRSLQSALDVSPKHVLSERSVLQV 164
Query: 813 MIDVASALEYL-YFGYSTPVIHCDLKPSNVLLG--DNMVAHLSDFGITK 858
+ ALE+L Y +H ++ N+ + D L+ +G
Sbjct: 165 ACRLLDALEFLHENEY----VHGNVTAENIFVDPEDQSQVTLAGYGFAF 209
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 3e-08
Identities = 87/586 (14%), Positives = 161/586 (27%), Gaps = 208/586 (35%)
Query: 167 PKEIGNLTK-LEEL----YLSFNGLQGA----------YDHGFLQIFVKNIF-VQFSHNF 210
+ L + L EL + +G+ G+ + IF + N
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL----NL 189
Query: 211 SKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTI-QGVGLQNNSLSGSLQSIPYV 269
C P + L L+ L L ++ + + S I + L L+S PY
Sbjct: 190 KNCNSPETV--LEMLQKL---LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244
Query: 270 R----LPNLEELYLWGNHFSG-----------SIPNFIFNASKLSRLELQKNSFSGFIPS 314
L N++ W N F+ + +F+ +A+ + + L +S P
Sbjct: 245 NCLLVLLNVQNAKAW-NAFNLSCKILLTTRFKQVTDFL-SAATTTHISLDHHS-MTLTPD 301
Query: 315 TFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLS 374
L L DL +
Sbjct: 302 E--------------------VKSL-----LLKYLDCRPQDLPREVLTT----------- 325
Query: 375 HSLKIFDMSDCNVSGSIPEEIGNLTNLIGFY--LGGNNLNGSIPITLGKLQ--KLQVLY- 429
+ ++ I E I + + + + L I +L L+ + + ++
Sbjct: 326 NPRRL---------SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376
Query: 430 ----FPDNKLEGSIPDEV-CRL--AKVYQLDLSNNKLSGSIPACFGDLASLRNLSLA--- 479
FP + IP + + + + + L SL
Sbjct: 377 RLSVFPPSAH---IPTILLSLIWFDVIKSDVMV-------------VVNKLHKYSLVEKQ 420
Query: 480 SNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAI 539
E IPS +YL L +++ N L +
Sbjct: 421 PKESTISIPS--------IYLELK---------VKLENEYALHRS--------------- 448
Query: 540 GGIKDLQFLFLE-YNILQGSIPDSFGDLMS-----------LKSLNLSNNNLSGSIPVSL 587
++ YNI + D LK++
Sbjct: 449 ---------IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP------------ 487
Query: 588 EKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNL-----HVPPCKTSI 642
E+++ + + L F LE +I + N S N L L ++ C
Sbjct: 488 ERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL--NTLQ----QLKFYKPYI--CDNDP 539
Query: 643 QHTRRKNTILLGIFLPLSTIFMIAVILLIARNR---KRGRQQPNDA 685
++ R N IL FLP I L+ ++ + ++A
Sbjct: 540 KYERLVNAIL--DFLP-----KIEENLICSKYTDLLRIALMAEDEA 578
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 1e-06
Identities = 84/476 (17%), Positives = 156/476 (32%), Gaps = 154/476 (32%)
Query: 572 LNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631
++ + V + ++ + + ++ ++PK S E +
Sbjct: 14 HQYQYKDI---LSVFEDA--FVDNFD--CKDVQ-DMPKSI----LSKEEID--------- 52
Query: 632 NLHVPPCKTSIQHTRRKNTILLGIFL--PLSTI--FMIAVI-----LLIARNRKRGRQQP 682
H+ K ++ T R L L + F+ V+ L++ + RQ
Sbjct: 53 --HIIMSKDAVSGTLR----LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS 106
Query: 683 --------------NDAD-MPQEATWRRFSYLELCQATDGFSENNLI---GRGGFG-SVY 723
ND + R YL+L QA + G G G +
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW- 165
Query: 724 KARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI--IKIISCCSIGDFKALFK 781
VA+ V C S+ V+C+ I + + +C S + +
Sbjct: 166 ---------VALDV----C----LSYKVQCK-----MDFKIFWLNLKNCNSPETVLEMLQ 203
Query: 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNV 841
L + P + S++ +I R++ + + L L S P +C L V
Sbjct: 204 KLLYQIDP-----NWTSRSDHSSNIKLRIH---SIQAELRRLLK--SKPYENCLL----V 249
Query: 842 LLGDNM--VAHLSDFGIT-KLL--TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVY 896
L N+ + F ++ K+L TR + VT + AT +++L++ S
Sbjct: 250 L--LNVQNAKAWNAFNLSCKILLTTR-FKQVTDFLSAATTTHISLDHHSMTLTPDE---- 302
Query: 897 NFGVMLMETFTGKKPTN-----------------EIFNEGMTLKHWVNDWLLISIMK--- 936
L+ + +P + E +G L W N W ++ K
Sbjct: 303 --VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG--LATWDN-WKHVNCDKLTT 357
Query: 937 IVDGSL--LSREDIQ--FVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
I++ SL L + + F ++ VF P +A I T LL +
Sbjct: 358 IIESSLNVLEPAEYRKMF---DRL--SVF----------PP---SAH-IPTILLSL 394
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 7e-08
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 24/164 (14%)
Query: 713 LIGRGGFGSVYKA-RIQDGMEVA---VKVFNQQCGRAF-----------KSFDVECEVMK 757
IG GGFG +Y A + A VKV Q+ G F K + K
Sbjct: 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERK 103
Query: 758 SIRHRNIIKIISCCSIGDFKALFKALALEYMPHG-SLEKYLYSSNYILDIFQRLNIMIDV 816
+ + I ++ + +E + G L+K + N L + I +
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQK-ISGQNGTFKKSTVLQLGIRM 160
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLLG--DNMVAHLSDFGITK 858
LEY++ +H D+K +N+LLG + +L+D+G++
Sbjct: 161 LDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSY 201
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 8e-08
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 48/219 (21%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVF-NQQCGRAFKSFDVECEVMKSIRHR------NI 764
+IG+G FG V KA + VA+K+ N++ R + E +++ +R + N+
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 765 IKIISCCSIGDFKALFKA---LALEYMPHGSLEKYLYSSNYI---LDIFQRLNIMIDVAS 818
I ++ F F+ + E + +L + + + + L + ++ +
Sbjct: 162 IHMLEN-----FT--FRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRK--FAHSILQ 211
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTREDQFVTQT-QT--- 872
L+ L+ +IHCDLKP N+LL + + DFG + E Q V Q+
Sbjct: 212 CLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTYIQSRFY 265
Query: 873 --PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGK 909
P I + Y D+++ G +L E TG
Sbjct: 266 RAPEVI--LGARY------GMPIDMWSLGCILAELLTGY 296
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 8e-08
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 270 RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNN 329
NLE L L S+ N KL +LEL +N G + L NL L L+
Sbjct: 47 EFVNLEFLSLINVGLI-SVSNLPKL-PKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSG 104
Query: 330 NHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILS-RKSVGNLSHSLKIFDMSD 384
N L ++S L L + L+ +DL + + + R+SV L L D D
Sbjct: 105 NKLK----DISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 7e-07
Identities = 38/134 (28%), Positives = 51/134 (38%), Gaps = 26/134 (19%)
Query: 445 RLAKVYQLDLSNNKLS-GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503
A V +L L N K + G I + +L LSL + LISV S L + L LS
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELS 79
Query: 504 SNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSF 563
N + G L + L L ++ S N + I L+ L
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNK--------LKDISTLEPL--------------- 116
Query: 564 GDLMSLKSLNLSNN 577
L LKSL+L N
Sbjct: 117 KKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 34/148 (22%), Positives = 52/148 (35%), Gaps = 14/148 (9%)
Query: 294 NASKLSRLELQKNSFS-GFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLE 352
+ + L L + G I NL+ L L N L S +S+L L+
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-------VSNLPKLPKLK 74
Query: 353 FIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSG-SIPEEIGNLTNLIGFYLGGN-- 409
++LS N I G L + +L ++S + S E + L L L
Sbjct: 75 KLELSENRIFGGLD--MLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132
Query: 410 -NLNGSIPITLGKLQKLQVLYFPDNKLE 436
NLN L +L L D + +
Sbjct: 133 TNLNDYRESVFKLLPQLTYLDGYDREDQ 160
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 8e-05
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLE 588
+ G I +L+FL L L S+ + L LK L LS N + G + + E
Sbjct: 35 KSNDGKIEGLTAEFVNLEFLSLINVGLI-SV-SNLPKLPKLKKLELSENRIFGGLDMLAE 92
Query: 589 KLSYLKDLNLSFNKLE 604
KL L LNLS NKL+
Sbjct: 93 KLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 4/112 (3%)
Query: 172 NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALG 231
+ EL L G FV F+ + + N + L L+ L L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELS 79
Query: 232 LNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPY-VRLPNLEELYLWGN 282
N++ G + + + + L N L + ++ +L L+ L L+
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLK-DISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 409 NNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFG 468
+ +G I + L+ L + L S+ + + +L K+ +L+LS N++ G +
Sbjct: 35 KSNDGKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELSENRIFGGLDMLAE 92
Query: 469 DLASLRNLSLASNELISVIPSTFW-NLKDILYLNLSSNSLT 508
L +L +L+L+ N+L + L+ + L+L + +T
Sbjct: 93 KLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVT 133
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 30/143 (20%), Positives = 44/143 (30%), Gaps = 37/143 (25%)
Query: 318 NLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSL 377
++ L L+N +E + LEF+ L + + SV NL
Sbjct: 22 TPAAVRELVLDNCKSNDGKIE----GLTAEFVNLEFLSLINVGL------ISVSNLP--- 68
Query: 378 KIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG 437
L L L N + G + + KL L L NKL+
Sbjct: 69 -------------------KLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD 109
Query: 438 SIPDEVCRLAKVYQL---DLSNN 457
+ L K+ L DL N
Sbjct: 110 --ISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 99 NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSA--LSNCTYLRILR 156
+ L L + N E + + E L+L G+ S L L+ L
Sbjct: 25 AVRELVLDNCKSNDGKIE---GLTAEFVNLEFLSLINV----GLISVSNLPKLPKLKKLE 77
Query: 157 LSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187
LS N GG+ L L L LS N L+
Sbjct: 78 LSENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 1e-07
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 62/234 (26%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVEC-----EVMKSIRHRNIIK 766
+G G FG V+ R + A+KV ++ + VE ++ + H II+
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKE--IVVRLKQVEHTNDERLMLSIVTHPFIIR 70
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLNIMIDVA 817
+ D + +F + ++Y+ G L L S Y ++
Sbjct: 71 MWGTFQ--DAQQIF--MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV----------C 116
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTREDQFVTQTQ--TP 873
ALEYL+ S +I+ DLKP N+LL N H ++DFG K VT T TP
Sbjct: 117 LALEYLH---SKDIIYRDLKPENILLDKN--GHIKITDFGFAK----YVPDVTYTLCGTP 167
Query: 874 ATIGYMALEYGSEGRVSTNG-----DVYNFGVMLMETFTGKKP-----TNEIFN 917
Y+A E VST D ++FG+++ E G P T + +
Sbjct: 168 D---YIAPEV-----VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE 213
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Query: 270 RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNN 329
LE L + SI N +KL +LEL N SG + NL L L+
Sbjct: 40 EFEELEFLSTINVGLT-SIANLP-KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSG 97
Query: 330 NHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILS-RKSVGNLSHSLKIFD 381
N + +LS + L + L+ +DL + + + R++V L L D
Sbjct: 98 NKIK----DLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 26/134 (19%)
Query: 445 RLAKVYQLDLSNNKLS-GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503
+ V +L L N++ + G + + L LS + L S+ + L + L LS
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELS 72
Query: 504 SNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSF 563
N ++G L + L ++ S N I + ++ L
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNK--------IKDLSTIEPL--------------- 109
Query: 564 GDLMSLKSLNLSNN 577
L +LKSL+L N
Sbjct: 110 KKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 14/140 (10%)
Query: 294 NASKLSRLELQKNSFS-GFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLE 352
S + L L + + G + L+ L N LTS +++L L+
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS-------IANLPKLNKLK 67
Query: 353 FIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSG-SIPEEIGNLTNLIGFYLGGN-- 409
++LS N + G L + +L ++S + S E + L NL L
Sbjct: 68 KLELSDNRVSGGLE--VLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125
Query: 410 -NLNGSIPITLGKLQKLQVL 428
NLN L +L L
Sbjct: 126 TNLNDYRENVFKLLPQLTYL 145
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 517 NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSN 576
++K LV +D S +N G + ++L+FL L SI + L LK L LS+
Sbjct: 18 DVKELV-LDNSRSN-EGKLEGLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLELSD 73
Query: 577 NNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
N +SG + V EK L LNLS NK++
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 7e-05
Identities = 25/114 (21%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 397 NLTNLIGFYLGGNNLN-GSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455
++ L L + N G + + ++L+ L + L SI + + +L K+ +L+LS
Sbjct: 18 DVKEL---VLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLELS 72
Query: 456 NNKLSGSIPACFGDLASLRNLSLASNELISV-IPSTFWNLKDILYLNLSSNSLT 508
+N++SG + +L +L+L+ N++ + L+++ L+L + +T
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 8e-05
Identities = 28/143 (19%), Positives = 45/143 (31%), Gaps = 37/143 (25%)
Query: 318 NLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSL 377
++K L L+N+ LE + LEF+ + + S+ NL
Sbjct: 15 TPSDVKELVLDNSRSNEGKLE----GLTDEFEELEFLSTINVGL------TSIANLP--- 61
Query: 378 KIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG 437
L L L N ++G + + K L L NK++
Sbjct: 62 -------------------KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKD 102
Query: 438 SIPDEVCRLAKVYQL---DLSNN 457
+ L K+ L DL N
Sbjct: 103 --LSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 4/112 (3%)
Query: 172 NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNF-SKCEIPNEIGNLRNLEVLAL 230
+ ++EL L + G F + F+ + + + L L+ L L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIAN---LPKLNKLKKLEL 71
Query: 231 GLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGN 282
N++ G + + + L N + P +L NL+ L L+
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 35/170 (20%), Positives = 71/170 (41%), Gaps = 31/170 (18%)
Query: 447 AKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNS 506
A+ +L + + A L + ++L+L++N I I S+ ++++ L+L N
Sbjct: 25 AEKVELHGMIPPIEK-MDATLSTLKACKHLALSTN-NIEKI-SSLSGMENLRILSLGRNL 81
Query: 507 LTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDL 566
+ +I NL + L+ L++ YN + S+ L
Sbjct: 82 IK-----KIENLDAVAD--------------------TLEELWISYNQIA-SL-SGIEKL 114
Query: 567 MSLKSLNLSNNNLSGSIPVS-LEKLSYLKDLNLSFNKLEGEIPKGGSFGN 615
++L+ L +SNN ++ + L L L+DL L+ N L + + +
Sbjct: 115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSE 164
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 4e-07
Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 33/195 (16%)
Query: 410 NLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGD 469
+ K++ L+ +E + + L L LS N + I +
Sbjct: 16 ERKSVVATEAEKVE----LHGMIPPIEK-MDATLSTLKACKHLALSTNNIE-KI-SSLSG 68
Query: 470 LASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMN 529
+ +LR LSL N LI I + + L +S N + +E L L + S N
Sbjct: 69 MENLRILSLGRN-LIKKIENLDAVADTLEELWISYNQIASLSGIE--KLVNLRVLYMSNN 125
Query: 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEK 589
I ++ L L L+ L L+ N L +
Sbjct: 126 K--------ITNWGEIDKL---------------AALDKLEDLLLAGNPLYNDYKENNAT 162
Query: 590 LSYLKDLNLSFNKLE 604
Y ++ L+
Sbjct: 163 SEYRIEVVKRLPNLK 177
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 4e-06
Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 36/144 (25%)
Query: 142 IPSALSNCTYLRILRLSYNDFAGGIPK--EIGNLTKLEELYLSFNGLQGAYDHGFLQIFV 199
+ + LS + L LS N+ I K + + L L L N ++
Sbjct: 40 MDATLSTLKACKHLALSTNN----IEKISSLSGMENLRILSLGRNLIK------------ 83
Query: 200 KNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSL 259
+I N LE L + N++ + E + ++ + + NN +
Sbjct: 84 --------------KIENLDAVADTLEELWISYNQIASLSGIE--KLVNLRVLYMSNNKI 127
Query: 260 SGSLQSIPYVR-LPNLEELYLWGN 282
+ + I + L LE+L L GN
Sbjct: 128 T-NWGEIDKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 6e-06
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 15/124 (12%)
Query: 69 IPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHT---LKLLSFGDNQLSGEIPTNICSNL 125
+ + L L + + L L +N I ++ L++LS G N + +I N+ +
Sbjct: 40 MDATLSTLKACKHLALSTNNIE-----KISSLSGMENLRILSLGRNLIK-KI-ENLDAVA 92
Query: 126 PFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFA--GGIPKEIGNLTKLEELYLSF 183
E L +S N S + LR+L +S N G I ++ L KLE+L L+
Sbjct: 93 DTLEELWISYNQIA--SLSGIEKLVNLRVLYMSNNKITNWGEI-DKLAALDKLEDLLLAG 149
Query: 184 NGLQ 187
N L
Sbjct: 150 NPLY 153
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
Query: 498 LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG 557
+ L+ + + + LK + S NN I + + G+++L+ L L N+++
Sbjct: 28 VELHGMIPPIEK-MDATLSTLKACKHLALSTNNIE-KISS-LSGMENLRILSLGRNLIK- 83
Query: 558 SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE--GEIPKGGSFGN 615
I + +L+ L +S N ++ S+ +EKL L+ L +S NK+ GEI K +
Sbjct: 84 KIENLDAVADTLEELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDK 141
Query: 616 FSAESFEGNKL 626
GN L
Sbjct: 142 LEDLLLAGNPL 152
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 42/164 (25%)
Query: 300 RLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359
L + +T L+ K L L+ N++ + SSLS + L + L N
Sbjct: 29 ELHGMIPPIEK-MDATLSTLKACKHLALSTNNIEKI-------SSLSGMENLRILSLGRN 80
Query: 360 SIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITL 419
I I +++ ++ +L+ +S N I +L+G +
Sbjct: 81 LIKKI---ENLDAVADTLEELWISY---------------NQI------ASLSG-----I 111
Query: 420 GKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQL---DLSNNKLS 460
KL L+VLY +NK+ E+ +LA + +L L+ N L
Sbjct: 112 EKLVNLRVLYMSNNKITN--WGEIDKLAALDKLEDLLLAGNPLY 153
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 10/106 (9%)
Query: 270 RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNN 329
L + L L N+ I + + L L L +N I + L+ L ++
Sbjct: 46 TLKACKHLALSTNNIE-KISS-LSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISY 102
Query: 330 NHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375
N + SL S + L + +S+N I + L
Sbjct: 103 NQIASL-------SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDK 141
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 49/231 (21%), Positives = 86/231 (37%), Gaps = 52/231 (22%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSF-----DVEC-----EVMKSIRH 761
L+G+G FG V + + A+K+ K +V V+++ RH
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILK-------KEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLNI 812
+ + D L +EY G L +L Y +I
Sbjct: 208 PFLTALKYSFQTHDR--LC--FVMEYANGGELFFHLSRERVFSEDRARFYGAEI------ 257
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT 872
SAL+YL+ + V++ DLK N++L + ++DFG+ K ++ +T
Sbjct: 258 ----VSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKT 308
Query: 873 -PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFN 917
T Y+A E + D + GV++ E G+ P ++F
Sbjct: 309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 359
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 7e-07
Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 8/128 (6%)
Query: 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511
+ L+ + + A + + R L L + I VI + L ++ S N +
Sbjct: 2 VKLTAELIEQA--AQYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEIR--- 55
Query: 512 PLE-IGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG-SIPDSFGDLMSL 569
L+ L+ L + + N + + DL L L N L D L SL
Sbjct: 56 KLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSL 115
Query: 570 KSLNLSNN 577
L + N
Sbjct: 116 TYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Query: 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNN 330
L + + N + F +L L + N L +L L L NN
Sbjct: 41 LDQFDAIDFSDNEIR-KLDGFPLL-RRLKTLLVNNNRICRIGEGLDQALPDLTELILTNN 98
Query: 331 HLTSLTLELSFLSSLSNCKYLEFIDLSSNSI 361
L EL L L++ K L ++ + N +
Sbjct: 99 SLV----ELGDLDPLASLKSLTYLCILRNPV 125
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 6e-06
Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 38/142 (26%)
Query: 146 LSNCTYLRILRLSYNDFAGGIPKEIGNL----TKLEELYLSFNGLQGAYDHGFLQIFVKN 201
+N R L L IP I NL + + + S N ++
Sbjct: 15 YTNAVRDRELDLRGYK----IPV-IENLGATLDQFDAIDFSDNEIR-------------- 55
Query: 202 IFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSG 261
++ LR L+ L + N++ + + + + L NNSL
Sbjct: 56 ------------KLDG-FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV- 101
Query: 262 SLQSIPYVR-LPNLEELYLWGN 282
L + + L +L L + N
Sbjct: 102 ELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Query: 500 LNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSI 559
+ L++ + N ++D VI N + + N ++ +
Sbjct: 2 VKLTAELIEQAAQYT--NAVRDRELDLR-GYKIPVIENLGATLDQFDAIDFSDNEIR-KL 57
Query: 560 PDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604
D F L LK+L ++NN + + L L +L L+ N L
Sbjct: 58 -DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 5/115 (4%)
Query: 71 SRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFES 130
++ N + L L + I + + F DN++ ++ L ++
Sbjct: 13 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KL-DGF-PLLRRLKT 68
Query: 131 LNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFN 184
L ++ N L L L+ N G + +L L L + N
Sbjct: 69 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Query: 419 LGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSL 478
+ + L K+ I + L + +D S+N++ + F L L+ L +
Sbjct: 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLLV 71
Query: 479 ASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLE-IGNLKVLVKIDFSMN 529
+N + + L D+ L L++NSL L+ + +LK L + N
Sbjct: 72 NNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 31/151 (20%), Positives = 48/151 (31%), Gaps = 31/151 (20%)
Query: 335 LTLEL-SFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE 393
LT EL + +N +DL I I +++G D SD
Sbjct: 4 LTAELIEQAAQYTNAVRDRELDLRGYKIPVI---ENLGATLDQFDAIDFSDN-------- 52
Query: 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453
EI L L++L+ L +N++ L + +L
Sbjct: 53 EIRKLDGF------------------PLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94
Query: 454 LSNNKLSG-SIPACFGDLASLRNLSLASNEL 483
L+NN L L SL L + N +
Sbjct: 95 LTNNSLVELGDLDPLASLKSLTYLCILRNPV 125
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 6e-04
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 8/91 (8%)
Query: 99 NIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPS--ALSNCTYLRILR 156
N + L ++ + N+ + L F++++ S N I L+ L
Sbjct: 17 NAVRDRELDLRGYKI--PVIENLGATLDQFDAIDFSDN----EIRKLDGFPLLRRLKTLL 70
Query: 157 LSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187
++ N L L EL L+ N L
Sbjct: 71 VNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 7e-07
Identities = 54/237 (22%), Positives = 86/237 (36%), Gaps = 65/237 (27%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSF-----DVEC-----EVMKSIRH 761
L+G+G FG V R + A+K+ K +V V+++ RH
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILR-------KEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 762 RNIIKIISCCSIGDF---KALFKALALEYMPHGSLEKYLYSSN---------YILDIFQR 809
+ + F L +EY G L +L Y +I
Sbjct: 65 PFLTALKYA-----FQTHDRLC--FVMEYANGGELFFHLSRERVFTEERARFYGAEI--- 114
Query: 810 LNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQ 869
SALEYL +S V++ D+K N++L + ++DFG+ K +
Sbjct: 115 -------VSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---T 161
Query: 870 TQT-PATIGYMA---LEYGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFN 917
+T T Y+A LE GR D + GV++ E G+ P +F
Sbjct: 162 MKTFCGTPEYLAPEVLEDNDYGRAV---DWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 50.3 bits (119), Expect = 2e-06
Identities = 19/146 (13%), Positives = 41/146 (28%), Gaps = 17/146 (11%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIF-----NIHTLKLLSFGDNQ 112
LN + + + +L+SL + S S+ I N+ L L ++
Sbjct: 174 LNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDY 233
Query: 113 LSGEIPTNIC-----SNLPFFESLNLSKNMFHGGIPSALSNCTY---LRILRLSYNDF-- 162
P + L + + L + +S
Sbjct: 234 GFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293
Query: 163 --AGGIPKEIGNLTKLEELYLSFNGL 186
A + + + L+ + + +N L
Sbjct: 294 EGARLLLDHVDKIKHLKFINMKYNYL 319
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.6 bits (104), Expect = 1e-04
Identities = 29/165 (17%), Positives = 64/165 (38%), Gaps = 23/165 (13%)
Query: 461 GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG---- 516
+ + L NL + +S+ NLK L + S L + +I
Sbjct: 162 VDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKS---LEIISGGLPDSVVEDILGSDL 218
Query: 517 -NLKVLVKIDFSMNNFSGVIPNAI-------GGIKDLQFLFLEYNILQGSIPDSFGD--- 565
NL+ L + + ++ + +L++L + Q + + F +
Sbjct: 219 PNLEKL-VLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDI 277
Query: 566 LMSLKSLNLSNNNLSGS----IPVSLEKLSYLKDLNLSFNKLEGE 606
L L+++++S L+ + ++K+ +LK +N+ +N L E
Sbjct: 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.6 bits (104), Expect = 1e-04
Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 21/143 (14%)
Query: 256 NNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPST 315
++ I LPNLE+L L+ + ++ F+ L
Sbjct: 203 GGLPDSVVEDILGSDLPNLEKLVLYVG-----VEDYGFDGDMNVFRPLFSK--------- 248
Query: 316 FGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI---DGILSRKSVGN 372
NLK LG+ + ++ +E+ LE +D+S+ + L V
Sbjct: 249 -DRFPNLKWLGIVDAEEQNVVVEM--FLESDILPQLETMDISAGVLTDEGARLLLDHVDK 305
Query: 373 LSHSLKIFDMSDCNVSGSIPEEI 395
+ H LK +M +S + +E+
Sbjct: 306 IKH-LKFINMKYNYLSDEMKKEL 327
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 7e-04
Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 12/90 (13%)
Query: 270 RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLE---LQKNSFSGF----IPSTFGNLRNL 322
R PNL+ L + + + L +LE + + + +++L
Sbjct: 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHL 309
Query: 323 KRLGLNNNHLT-----SLTLELSFLSSLSN 347
K + + N+L+ L L +S+
Sbjct: 310 KFINMKYNYLSDEMKKELQKSLPMKIDVSD 339
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 42/212 (19%), Positives = 94/212 (44%), Gaps = 39/212 (18%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQ-QCGRAFKSFDVECEVMKSIR-HRNIIKIISC 770
+GRG + V++A I + +V VK+ + + + E ++++++R NII +
Sbjct: 44 LGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKR----EIKILENLRGGPNIITLADI 99
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYS-SNYILD--IFQRLNIMIDVASALEYLYFGY 827
+ D + AL E++ + ++ + ++Y + +++ L AL+Y +
Sbjct: 100 --VKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH--- 147
Query: 828 STPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE---- 882
S ++H D+KP NV++ ++ L D+G+ + ++ A+ + E
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELLVD 204
Query: 883 ---YGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
Y + D+++ G ML K+P
Sbjct: 205 YQMY------DYSLDMWSLGCMLASMIFRKEP 230
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 415 IPITLGKLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSIPA-CFGDLAS 472
IP T QVLY DN++ + V RL ++ +LDL NN+L+ +PA F L
Sbjct: 28 IPTTT------QVLYLYDNQIT-KLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQ 79
Query: 473 LRNLSLASNELISVIPSTFWNLKDILYLNLSSN 505
L LSL N+L S+ F NLK + ++ L +N
Sbjct: 80 LTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 5e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 544 DLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNK 602
Q L+L N + P F L L L+L NN L+ +P + +KL+ L L+L+ N+
Sbjct: 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQ 89
Query: 603 LEGEIPKG 610
L+ IP+G
Sbjct: 90 LKS-IPRG 96
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 29/128 (22%)
Query: 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510
+D S L+ S+P G + + L L N++ + P F L + L+L +N LT
Sbjct: 13 TVDCSGKSLA-SVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV- 68
Query: 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLMSL 569
LP +GV + L L L N L+ SIP +F +L SL
Sbjct: 69 LP-------------------AGVFDK----LTQLTQLSLNDNQLK-SIPRGAFDNLKSL 104
Query: 570 KSLNLSNN 577
+ L NN
Sbjct: 105 THIWLLNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 260 SGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA-SKLSRLELQKNSFSGFIPSTFGN 318
SL S+P + LYL+ N + + +F+ ++L+RL+L N + F
Sbjct: 18 GKSLASVPTGIPTTTQVLYLYDNQIT-KLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDK 76
Query: 319 LRNLKRLGLNNNHLTSL 335
L L +L LN+N L S+
Sbjct: 77 LTQLTQLSLNDNQLKSI 93
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIP---YVRLPNLEELYLWGNHFSGSIPNFIFNA 295
+P I +T Q + L +N + + + RL L L L N + +P +F+
Sbjct: 24 VPTGIP--TTTQVLYLYDNQI----TKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDK 76
Query: 296 -SKLSRLELQKNSFSGFIPS-TFGNLRNLKRLGLNNN 330
++L++L L N IP F NL++L + L NN
Sbjct: 77 LTQLTQLSLNDNQLKS-IPRGAFDNLKSLTHIWLLNN 112
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 5e-06
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 415 IPITLGKLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSIPA-CFGDLAS 472
IP Q L+ +N++ + V L + QL ++NKL+ +IP F L
Sbjct: 31 IPTDK------QRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQ 82
Query: 473 LRNLSLASNELISVIPSTFWNLKDILYLNLSSN 505
L L L N L S+ F NLK + ++ L +N
Sbjct: 83 LTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 544 DLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNK 602
D Q L+L N + P F L++L+ L ++N L+ +IP + +KL+ L L+L+ N
Sbjct: 34 DKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLNDNH 92
Query: 603 LEGEIPKG 610
L+ IP+G
Sbjct: 93 LKS-IPRG 99
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIP---YVRLPNLEELYLWGNHFSGSIPNFIFNA 295
+PA I + Q + L NN + + + L NL++LY N + +IP +F+
Sbjct: 27 VPAGIP--TDKQRLWLNNNQI----TKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDK 79
Query: 296 -SKLSRLELQKNSFSGFIPS-TFGNLRNLKRLGLNNN 330
++L++L+L N IP F NL++L + L NN
Sbjct: 80 LTQLTQLDLNDNHLKS-IPRGAFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 29/128 (22%)
Query: 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510
++ N +L+ S+PA G + L L +N++ + P F +L ++ L +SN LT
Sbjct: 16 LVNCQNIRLA-SVPA--GIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA- 71
Query: 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD-SFGDLMSL 569
+P +GV + L L L N L+ SIP +F +L SL
Sbjct: 72 IP-------------------TGVFDK----LTQLTQLDLNDNHLK-SIPRGAFDNLKSL 107
Query: 570 KSLNLSNN 577
+ L NN
Sbjct: 108 THIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 260 SGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA-SKLSRLELQKNSFSGFIPSTFGN 318
+ L S+P + + L+L N + + +F+ L +L N + F
Sbjct: 21 NIRLASVPAGIPTDKQRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDK 79
Query: 319 LRNLKRLGLNNNHLTSL 335
L L +L LN+NHL S+
Sbjct: 80 LTQLTQLDLNDNHLKSI 96
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 5e-06
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 56/233 (24%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVECEVM------KSIRHRNII 765
++G+G FG V + + E+ AVK+ + + DVEC ++ + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKK--DVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 766 KIISCCSIGDF---KALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLNIM 813
++ SC F L+ +EY+ G L ++ Y +I
Sbjct: 406 QLHSC-----FQTMDRLY--FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI------- 451
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT- 872
A L +L S +I+ DLK NV+L ++DFG+ K + T+T
Sbjct: 452 ---AIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV---TTKTF 502
Query: 873 PATIGYMA---LEYGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFN 917
T Y+A + Y G+ D + FGV+L E G+ P +E+F
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSV---DWWAFGVLLYEMLAGQAPFEGEDEDELFQ 552
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 9e-06
Identities = 56/243 (23%), Positives = 92/243 (37%), Gaps = 73/243 (30%)
Query: 713 LIGRGGFGSVYKARIQDGMEV----AVKVFNQQCGRAFKSF------DVEC-----EVMK 757
++G+GG+G V++ R G A+KV K+ D +++
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-------KAMIVRNAKDTAHTKAERNILE 76
Query: 758 SIRHRNIIKIISCCSIGDF---KALFKALALEYMPHGSLEKYLYSSN---------YILD 805
++H I+ +I F L+ L LEY+ G L L Y+ +
Sbjct: 77 EVKHPFIVDLIYA-----FQTGGKLY--LILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 806 IFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTRE 863
I + AL +L+ +I+ DLKP N++L H L+DFG+ K +
Sbjct: 130 I----------SMALGHLH---QKGIIYRDLKPENIMLNHQ--GHVKLTDFGLCKESIHD 174
Query: 864 DQFVTQTQTPA-TIGYMA---LEYGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNE 914
T T TI YMA L R D ++ G ++ + TG P +
Sbjct: 175 GT---VTHTFCGTIEYMAPEILMRSGHNRAV---DWWSLGALMYDMLTGAPPFTGENRKK 228
Query: 915 IFN 917
+
Sbjct: 229 TID 231
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-05
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 65/238 (27%)
Query: 713 LIGRGGFGSVYKARIQDGMEV----AVKVFNQQCGRAFKSF-----DVEC----EVMKSI 759
++G+G FG V+ + G + A+KV K+ V +++ +
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLK-------KATLKVRDRVRTKMERDILVEV 83
Query: 760 RHRNIIKIISCCSIGDF---KALFKALALEYMPHGSLEKYLYSSN---------YILDIF 807
H I+K+ F L+ L L+++ G L L Y+ ++
Sbjct: 84 NHPFIVKLHYA-----FQTEGKLY--LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL- 135
Query: 808 QRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTREDQ 865
A AL++L+ S +I+ DLKP N+LL + H L+DFG++K ++
Sbjct: 136 ---------ALALDHLH---SLGIIYRDLKPENILLDEE--GHIKLTDFGLSKESIDHEK 181
Query: 866 FVTQTQTP-ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFN 917
+ + T+ YMA E + + + D ++FGV++ E TG P E
Sbjct: 182 ---KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 236
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 26/146 (17%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVF-NQQCGRAFKSFDVECEVMKSIRHR-----NII 765
+G G FG V + I + AVKV N + + +S +E +++K I++ NI+
Sbjct: 42 KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIV 99
Query: 766 KIISCCSIGDFKA----LFKALALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMIDVASAL 820
K + +F+ L SL + + +NY I I++ AL
Sbjct: 100 KYHGKF---MYYDHMCLIFEPLGP------SLYEIITRNNYNGFHIEDIKLYCIEILKAL 150
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDN 846
YL + H DLKP N+LL D
Sbjct: 151 NYLR---KMSLTHTDLKPENILLDDP 173
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 3e-05
Identities = 68/375 (18%), Positives = 115/375 (30%), Gaps = 135/375 (36%)
Query: 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR--------HRNI 764
+G G F +V+ + IQ VA+KV + D E ++KS+R +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD-EIRLLKSVRNSDPNDPNREMV 103
Query: 765 IKIISCCSIGDFKALFK---------ALALEYMPHGSLEKYLYSSNYI---LDIFQRLNI 812
++++ FK + E + H L K++ SNY L ++ I
Sbjct: 104 VQLLDD---------FKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKK--I 151
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---------------------------- 844
+ V L+YL+ +IH D+KP N+LL
Sbjct: 152 IQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSA 209
Query: 845 ---------------------DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY 883
+ + ++D G + + QT+ Y +LE
Sbjct: 210 VSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQ-----YRSLEV 264
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGK---------------------------------- 909
+T D+++ M E TG
Sbjct: 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIV 324
Query: 910 --KPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMEC 967
K + E F + LKH +V+ S+E+ F+ M
Sbjct: 325 AGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEE-----AAGFTDFLLPM---L 376
Query: 968 TVESPEKRINAKEIV 982
+ PEKR A E +
Sbjct: 377 ELI-PEKRATAAECL 390
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 711 NNLIGRGGFGSVYKAR-IQDGMEVAVKVF-NQQCGRAFKSFDVECEVMKSIRHR------ 762
++LIG+G FG V KA + VA+K+ N++ +E +++ +
Sbjct: 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKY 116
Query: 763 NIIKIISCCSIGDFKALFKA---LALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMIDVAS 818
I+ + F +F+ L E + +L L ++N+ + + + +
Sbjct: 117 YIVHLKRH-----F--MFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTREDQFVTQ-TQT--- 872
AL +L + +IHCDLKP N+LL + + + DFG + + Q + Q Q+
Sbjct: 169 ALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSS---CQLGQRIYQYIQSRFY 224
Query: 873 --PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGK 909
P + + + Y D+++ G +L+E TG+
Sbjct: 225 RSPEVL--LGMPY------DLAIDMWSLGCILVEMHTGE 255
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 5e-05
Identities = 54/237 (22%), Positives = 89/237 (37%), Gaps = 74/237 (31%)
Query: 713 LIGRGGFGSVYKARIQDGMEV----AVKVFNQQCGRAFKSF------DVEC-----EVMK 757
++G G +G V+ R G + A+KV K+ E +V++
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLK-------KATIVQKAKTTEHTRTERQVLE 113
Query: 758 SIRHRN-IIKIISCCSIGDF---KALFKALALEYMPHGSLEKYLYSSN---------YIL 804
IR ++ + F L L L+Y+ G L +L Y+
Sbjct: 114 HIRQSPFLVTLHYA-----FQTETKLH--LILDYINGGELFTHLSQRERFTEHEVQIYVG 166
Query: 805 DIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTR 862
+I ALE+L+ +I+ D+K N+LL N H L+DFG++K
Sbjct: 167 EI----------VLALEHLH---KLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVA 211
Query: 863 EDQFVTQT--QTPATIGYMA------LEYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
++ T YMA + G + V D ++ GV++ E TG P
Sbjct: 212 DETERAYDFCGTIE---YMAPDIVRGGDSGHDKAV----DWWSLGVLMYELLTGASP 261
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 5e-05
Identities = 57/239 (23%), Positives = 95/239 (39%), Gaps = 68/239 (28%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSF-----DVECEVM-------KSI 759
++G+G FG V+ A + + A+K K DVEC M +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALK-------KDVVLMDDDVEC-TMVEKRVLSLAW 75
Query: 760 RHRNIIKIISCCSIGDF---KALFKALALEYMPHGSLEKYLYSSN---------YILDIF 807
H + + F + LF +EY+ G L ++ S + Y +I
Sbjct: 76 EHPFLTHMFCT-----FQTKENLF--FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI- 127
Query: 808 QRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTREDQ 865
L++L+ S +++ DLK N+LL + H ++DFG+ K D
Sbjct: 128 ---------ILGLQFLH---SKGIVYRDLKLDNILLDKD--GHIKIADFGMCKENMLGDA 173
Query: 866 FVTQT--QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFN 917
T T TP Y+A E + + + D ++FGV+L E G+ P E+F+
Sbjct: 174 -KTNTFCGTPD---YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 7e-05
Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 64/237 (27%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSF-----DVECEVM------KSIR 760
+IG+G FG V AR + AVKV K + + + K+++
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQ-------KKAILKKKEEKHIMSERNVLLKNVK 97
Query: 761 HRNIIKIISCCSIGDFKA---LFKALALEYMPHGSLEKYLYSSN---------YILDIFQ 808
H ++ + F+ L+ L+Y+ G L +L Y +I
Sbjct: 98 HPFLVGLHFS-----FQTADKLY--FVLDYINGGELFYHLQRERCFLEPRARFYAAEI-- 148
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH--LSDFGITKLLTREDQF 866
ASAL YL+ S +++ DLKP N+LL H L+DFG+ K +
Sbjct: 149 --------ASALGYLH---SLNIVYRDLKPENILLDSQ--GHIVLTDFGLCKENIEHNS- 194
Query: 867 VTQTQTP-ATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFN 917
T T T Y+A E + D + G +L E G P T E+++
Sbjct: 195 --TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD 249
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 7e-05
Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 66/238 (27%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSF-----DVECEVM------KSIR 760
++G+G FG V + + E+ AVK+ K DVEC ++ +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILK-------KDVVIQDDDVECTMVEKRVLALPGK 79
Query: 761 HRNIIKIISCCSIGDF---KALFKALALEYMPHGSLEKYLYSSN---------YILDIFQ 808
+ ++ SC F L+ +EY+ G L ++ Y +I
Sbjct: 80 PPFLTQLHSC-----FQTMDRLY--FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI-- 130
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
A L +L S +I+ DLK NV+L ++DFG+ K +
Sbjct: 131 --------AIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--- 176
Query: 869 QTQT-PATIGYMA---LEYGSEGRVSTNGDVYNFGVMLMETFTGKKP-----TNEIFN 917
T+T T Y+A + Y G+ D + FGV+L E G+ P +E+F
Sbjct: 177 TTKTFCGTPDYIAPEIIAYQPYGKSV---DWWAFGVLLYEMLAGQAPFEGEDEDELFQ 231
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 8e-05
Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 34/151 (22%)
Query: 713 LIGRGGFGSVYKA--RIQDGMEVAVKVFNQQCGRAFKSF----DVECEVMKSIRHR---- 762
+G G FG V + + +VA+K+ R + +E V+K I+ +
Sbjct: 26 NLGEGTFGKVVECLDHARGKSQVALKII-----RNVGKYREAARLEINVLKKIKEKDKEN 80
Query: 763 --NIIKIISCCSIGDFKA----LFKALALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMID 815
+ + +F F+ L + ++L +N+ + ++
Sbjct: 81 KFLCVLMSDWF---NFHGHMCIAFELLGK------NTFEFLKENNFQPYPLPHVRHMAYQ 131
Query: 816 VASALEYLYFGYSTPVIHCDLKPSNVLLGDN 846
+ AL +L+ + H DLKP N+L ++
Sbjct: 132 LCHALRFLH---ENQLTHTDLKPENILFVNS 159
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 3e-04
Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 62/236 (26%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSF-----DVECEVM------KSIR 760
++G+G FG V AR+++ ++ AVKV K DVEC + +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLK-------KDVILQDDDVECTMTEKRILSLARN 82
Query: 761 HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLN 811
H + ++ C D LF +E++ G L ++ S Y +I
Sbjct: 83 HPFLTQLFCCFQTPD--RLF--FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI----- 133
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
SAL +L+ +I+ DLK NVLL L+DFG+ K T
Sbjct: 134 -----ISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV---TTA 182
Query: 872 T-PATIGYMA---LEYGSEGR-VSTNGDVYNFGVMLMETFTGKKP-----TNEIFN 917
T T Y+A L+ G V D + GV+L E G P +++F
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAV----DWWAMGVLLYEMLCGHAPFEAENEDDLFE 234
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 3e-04
Identities = 48/220 (21%), Positives = 83/220 (37%), Gaps = 47/220 (21%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVECEVMKSIRHRNI-IKIISC 770
+IGRG + V R++ + A+KV ++ D++ +++ + +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKE--LVNDDEDIDW----VQTEKHVFEQASNH 69
Query: 771 CSIGDFKALFKA-----LALEYMPHGSLEKYLYSSN---------YILDIFQRLNIMIDV 816
+ + F+ +EY+ G L ++ Y +I
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI---------- 119
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT-PAT 875
+ AL YL+ +I+ DLK NVLL L+D+G+ K R T T T
Sbjct: 120 SLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGT 173
Query: 876 IGYMA---LEYGSEGR-VSTNGDVYNFGVMLMETFTGKKP 911
Y+A L G V D + GV++ E G+ P
Sbjct: 174 PNYIAPEILRGEDYGFSV----DWWALGVLMFEMMAGRSP 209
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 4e-04
Identities = 47/220 (21%), Positives = 83/220 (37%), Gaps = 47/220 (21%)
Query: 713 LIGRGGFGSVYKARIQDGMEV-AVKVFNQQCGRAFKSFDVECEVMKSIRHRNI-IKIISC 770
+IGRG + V R++ + A++V ++ D++ +++ + +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKE--LVNDDEDIDW----VQTEKHVFEQASNH 112
Query: 771 CSIGDFKALFKA-----LALEYMPHGSLEKYLYSSN---------YILDIFQRLNIMIDV 816
+ + F+ +EY+ G L ++ Y +I
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI---------- 162
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT-PAT 875
+ AL YL+ +I+ DLK NVLL L+D+G+ K R T T T
Sbjct: 163 SLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGT 216
Query: 876 IGYMA---LEYGSEGR-VSTNGDVYNFGVMLMETFTGKKP 911
Y+A L G V D + GV++ E G+ P
Sbjct: 217 PNYIAPEILRGEDYGFSV----DWWALGVLMFEMMAGRSP 252
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 24/150 (16%), Positives = 55/150 (36%), Gaps = 32/150 (21%)
Query: 713 LIGRGGFGSVYKA--RIQDGMEVAVKVFNQQCGRAFKSF----DVECEVMKSIRHR---- 762
+G G FG V + G VAVK+ + + E +V++ +
Sbjct: 21 TLGEGAFGKVVECIDHKAGGRHVAVKIV-----KNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 763 --NIIKIISCCSIGDFKALFKA---LALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMIDV 816
++++ F+ + E + S ++ + ++ + + +
Sbjct: 76 TFRCVQMLEW-----FE--HHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQI 127
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLLGDN 846
++ +L+ S + H DLKP N+L +
Sbjct: 128 CKSVNFLH---SNKLTHTDLKPENILFVQS 154
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 7e-04
Identities = 45/327 (13%), Positives = 88/327 (26%), Gaps = 64/327 (19%)
Query: 80 QSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK-NMF 138
Q+L L + + + + + + ++LS +
Sbjct: 50 QTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRV---QHMDLSNSVIE 106
Query: 139 HGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIF 198
+ LS C+ L+ L L + I + + L L LS G G + +
Sbjct: 107 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS--GCSGFSEFALQTL- 163
Query: 199 VKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNS 258
+ + L+ L L
Sbjct: 164 --------------------LSSCSRLDELNLSWCFDFT--------------------- 182
Query: 259 LSGSLQSIPYVRLPNLEELYLWGNHFS---GSIPNFIFNASKLSRLELQKNSF-SGFIPS 314
+Q + +L L G + + + L L+L +
Sbjct: 183 -EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQ 241
Query: 315 TFGNLRNLKRLGLNN-NHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373
F L L+ L L+ + TL L L+ + + GI+ ++ L
Sbjct: 242 EFFQLNYLQHLSLSRCYDIIPETLL-----ELGEIPTLKTLQVF-----GIVPDGTLQLL 291
Query: 374 SHSLKIFDMSDCNVSGSIPEEIGNLTN 400
+L ++ + + IGN N
Sbjct: 292 KEALPHLQINCSHFTTIARPTIGNKKN 318
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1002 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.98 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.97 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.96 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.95 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.94 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.94 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.93 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.93 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.92 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.92 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.9 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.9 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.9 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.9 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.9 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.89 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.89 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.89 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.89 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.89 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.89 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.88 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.88 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.88 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.88 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.88 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.87 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.87 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.86 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.85 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.85 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.84 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.82 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.81 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.81 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.81 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.81 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.8 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.8 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.8 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.79 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.79 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.78 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.76 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.76 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.75 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.75 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.75 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.74 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.73 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.73 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.72 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.71 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.68 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.67 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.67 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.64 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.63 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.63 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.62 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.62 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.61 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.59 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.58 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.57 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.57 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.56 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.56 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.54 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.51 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.49 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.49 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.46 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.39 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.31 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.3 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.3 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.27 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.25 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.11 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.09 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 99.02 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.01 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.96 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.84 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.8 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.75 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.71 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.5 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.39 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.33 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.31 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.15 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.04 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.0 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.86 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.83 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.62 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.51 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.42 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.39 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.25 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.16 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.08 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.03 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.02 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.9 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.62 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.58 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.57 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.55 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.53 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.48 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.45 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 96.45 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.22 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 95.89 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 95.06 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 94.56 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 93.96 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 91.65 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-86 Score=821.93 Aligned_cols=626 Identities=31% Similarity=0.467 Sum_probs=438.8
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCCCccccCCCCCCCCCcccccEeeCCCCcEEEEEeCCCCCccc---cCcccCCCCC
Q 037042 2 AANTSNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGT---IPSRLGNLSS 78 (1002)
Q Consensus 2 ~~~~~~~~~~~~~l~~~k~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~---~p~~l~~l~~ 78 (1002)
|+.+...++|++||++||+++. ||. .+ ++|+.++|||+|+||+|+ +++|+.|||+++.+.|. +|+++++|+.
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~-~~~-~l-~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP-DKN-LL-PDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS-CTT-SS-TTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred CccccCCHHHHHHHHHHHhhCC-Ccc-cc-cCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCc
Confidence 4455557899999999999996 787 55 589988999999999999 68999999999999998 7766666655
Q ss_pred CCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCc--ccCCCCCCCCEEeCCCCcccccCCccc-cCCCCCceE
Q 037042 79 LQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPT--NICSNLPFFESLNLSKNMFHGGIPSAL-SNCTYLRIL 155 (1002)
Q Consensus 79 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~--~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L 155 (1002)
|+.++++.|.+. .+|..|+++++|++|||++|.++|.+|. .+ +++++|++|+|++|.+++.+|..+ .++++|++|
T Consensus 79 L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l-~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 156 (768)
T 3rgz_A 79 LESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSL-GSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 156 (768)
T ss_dssp CCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGG-GGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEE
T ss_pred ccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHH-hCCCCCCEEECcCCccCCcCCHHHhccCCCCCEE
Confidence 555555555543 3445555555555555555555555554 32 445555555555555555555443 555555555
Q ss_pred EcccccCCCCCccc---cccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccC
Q 037042 156 RLSYNDFAGGIPKE---IGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL 232 (1002)
Q Consensus 156 ~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~ 232 (1002)
+|++|++++..|.. +.++++|++|+|++|.+++..+. ..+.....+++++|...+.+|. ++++++|++|+|++
T Consensus 157 ~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~ 232 (768)
T 3rgz_A 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232 (768)
T ss_dssp ECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCS
T ss_pred ECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcC
Confidence 55555555555544 45555555555555555543332 2233444455555555544444 55555555555555
Q ss_pred cccccccccccccccccceeecccCCCcc----------------------ccCCccccCCCccchhhcccccccccccc
Q 037042 233 NKLVGVIPAEIFNMSTIQGVGLQNNSLSG----------------------SLQSIPYVRLPNLEELYLWGNHFSGSIPN 290 (1002)
Q Consensus 233 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 290 (1002)
|++++.+|..+.++++|++|+|++|++.+ .++...+..+++|++|+|++|++++.+|.
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~ 312 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCG
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccch
Confidence 55555555555555555555555555544 33332222234555555555555555555
Q ss_pred cccccCCCCeeecCCCccCCCCccc-cccccccchhccccccCc-cchhhhhhhc-------------------ccCC--
Q 037042 291 FIFNASKLSRLELQKNSFSGFIPST-FGNLRNLKRLGLNNNHLT-SLTLELSFLS-------------------SLSN-- 347 (1002)
Q Consensus 291 ~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~~~-------------------~l~~-- 347 (1002)
.|.++++|++|+|++|++++.+|.. |+++++|++|+|++|+++ .+|..+.... .+..
T Consensus 313 ~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~ 392 (768)
T 3rgz_A 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 392 (768)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCST
T ss_pred HHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcc
Confidence 5555555555555555555444433 555555555555555544 2332211110 0111
Q ss_pred CCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCE
Q 037042 348 CKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQV 427 (1002)
Q Consensus 348 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 427 (1002)
+++|++|++++|.+.+..+. .+.. .++|+.|++++|++++.+|..|+.+++|+.|++++|++++.+|..+..+++|++
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~-~l~~-l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 470 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPP-TLSN-CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470 (768)
T ss_dssp TCCCCEEECCSSEEEEECCG-GGGG-CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred cCCccEEECCCCccccccCH-HHhc-CCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceE
Confidence 33444444444444433221 1111 246788888888888888888888888888888888888888888888888888
Q ss_pred EEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCC
Q 037042 428 LYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507 (1002)
Q Consensus 428 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 507 (1002)
|+|++|++++.+|..+.++++|++|+|++|++++.+|..|+.+++|++|+|++|++.+.+|..+.++++|++|++++|++
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCcc
Confidence 88888888888888888889999999999999988999999999999999999999988999999999999999999988
Q ss_pred CCCCcccc----------------------------------------------------------------------cc
Q 037042 508 TGPLPLEI----------------------------------------------------------------------GN 517 (1002)
Q Consensus 508 ~~~~~~~~----------------------------------------------------------------------~~ 517 (1002)
+|.+|..+ ..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 87666543 33
Q ss_pred cccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceee
Q 037042 518 LKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLN 597 (1002)
Q Consensus 518 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 597 (1002)
+++|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+.+++|+.|||++|+++|.+|..+.++++|++||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCcccCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCcccc
Q 037042 598 LSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQ 643 (1002)
Q Consensus 598 Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~pc~~~~~ 643 (1002)
|++|+++|.||.++++.++...+|.||+++||.|. ++|.....
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~~~ 753 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPSNA 753 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSCC-
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCCcc
Confidence 99999999999999999999999999999999883 37865433
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-67 Score=655.43 Aligned_cols=541 Identities=32% Similarity=0.458 Sum_probs=461.1
Q ss_pred CcEEEEEeCCCCCccccCc--ccCCCCCCCEEEcccCCCCCCCCccc-ccccCCcEEEecccccccccCccc--C-----
Q 037042 53 HRVTALNISHLSLSGTIPS--RLGNLSSLQSLFLHSNQFSGSIPFSI-FNIHTLKLLSFGDNQLSGEIPTNI--C----- 122 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~ip~~~--~----- 122 (1002)
.+++.|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|++++.+|... +
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 4688999999999998988 89999999999999999988888776 677777777777777776555431 1
Q ss_pred -----------------CCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeecccc
Q 037042 123 -----------------SNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNG 185 (1002)
Q Consensus 123 -----------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 185 (1002)
..+++|++|+|++|.+++.+|. ++++++|++|+|++|++++.+|..|+++++|++|+|++|+
T Consensus 180 L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 258 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 258 (768)
T ss_dssp CCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSC
T ss_pred CCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCc
Confidence 4567777777777777776776 8888888888888888888888888888888888888888
Q ss_pred ccccccchhhHHhhhchhhcccCCcccCCCCccccCc-cccceeeccCcccccccccccccccccceeecccCCCccccC
Q 037042 186 LQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNL-RNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQ 264 (1002)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 264 (1002)
+++..+.. .+.....+.+++|.+.+.+|..++.+ ++|++|+|++|++++.+|..+.++++|++|+|++|++++.++
T Consensus 259 l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip 335 (768)
T 3rgz_A 259 FVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335 (768)
T ss_dssp CEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred ccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCC
Confidence 87655433 34566778888888888999988775 999999999999999999999999999999999999988887
Q ss_pred CccccCCCccchhhcccccccccccccccccC-CCCeeecCCCccCCCCcccccc--ccccchhccccccCccchhhhhh
Q 037042 265 SIPYVRLPNLEELYLWGNHFSGSIPNFIFNAS-KLSRLELQKNSFSGFIPSTFGN--LRNLKRLGLNNNHLTSLTLELSF 341 (1002)
Q Consensus 265 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~l~~~~~~ 341 (1002)
...+..+++|++|+|++|++++.+|..+.+++ +|++|+|++|++++.+|..+.. +++|++|+|++|+++....
T Consensus 336 ~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p---- 411 (768)
T 3rgz_A 336 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP---- 411 (768)
T ss_dssp HHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECC----
T ss_pred HHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccC----
Confidence 76688899999999999999999999998887 8999999999998888888877 7889999999998885322
Q ss_pred hcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccC
Q 037042 342 LSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGK 421 (1002)
Q Consensus 342 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 421 (1002)
..+.++++|++|+|++|++.+..+.. +.. .++|+.|++++|++++.+|..+..+++|++|+|++|++++.+|..+.+
T Consensus 412 -~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~-l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 488 (768)
T 3rgz_A 412 -PTLSNCSELVSLHLSFNYLSGTIPSS-LGS-LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488 (768)
T ss_dssp -GGGGGCTTCCEEECCSSEEESCCCGG-GGG-CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGG
T ss_pred -HHHhcCCCCCEEECcCCcccCcccHH-Hhc-CCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhc
Confidence 24778889999999999988765532 333 347899999999999899999999999999999999999888999999
Q ss_pred CCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccc----------
Q 037042 422 LQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTF---------- 491 (1002)
Q Consensus 422 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---------- 491 (1002)
+++|++|+|++|++++.+|.++..+++|++|+|++|++++.+|..++.+++|+.|++++|++.+.+|..+
T Consensus 489 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~ 568 (768)
T 3rgz_A 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCS
T ss_pred CCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhh
Confidence 9999999999999998899999999999999999999998899999999999999999998887666543
Q ss_pred ------------------------------------------------------------cccccCceeeccCCCCCCCC
Q 037042 492 ------------------------------------------------------------WNLKDILYLNLSSNSLTGPL 511 (1002)
Q Consensus 492 ------------------------------------------------------------~~l~~L~~L~Ls~N~l~~~~ 511 (1002)
.++++|++|||++|+++|.+
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~i 648 (768)
T 3rgz_A 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYI 648 (768)
T ss_dssp TTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCC
T ss_pred ccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccC
Confidence 34578999999999999999
Q ss_pred cccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC
Q 037042 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS 591 (1002)
Q Consensus 512 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 591 (1002)
|..+++++.|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..|+.+++|++|||++|+++|.+|.. ..+.
T Consensus 649 p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~ 727 (768)
T 3rgz_A 649 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFE 727 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGG
T ss_pred CHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999965 3455
Q ss_pred ccceeeCCCCc-Ccc
Q 037042 592 YLKDLNLSFNK-LEG 605 (1002)
Q Consensus 592 ~L~~L~Ls~N~-l~~ 605 (1002)
++....+.+|+ +.|
T Consensus 728 ~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 728 TFPPAKFLNNPGLCG 742 (768)
T ss_dssp GSCGGGGCSCTEEES
T ss_pred cCCHHHhcCCchhcC
Confidence 66667788887 444
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-62 Score=604.04 Aligned_cols=550 Identities=20% Similarity=0.229 Sum_probs=369.9
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|+|++|++++..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|...|.++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEE
Confidence 57999999999999887888999999999999999999999999999999999999999998 78888788999999999
Q ss_pred CCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhH-HhhhchhhcccCCcc
Q 037042 133 LSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQ-IFVKNIFVQFSHNFS 211 (1002)
Q Consensus 133 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~~~~~~~~~~~n~~ 211 (1002)
|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..+.. .......+++++|.+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 9999999888889999999999999999999999999999999999999999999876544321 224567788888888
Q ss_pred cCCCCccccCcccc---------------------------ceeeccCcccccccccccccccc--cceeecccCCCccc
Q 037042 212 KCEIPNEIGNLRNL---------------------------EVLALGLNKLVGVIPAEIFNMST--IQGVGLQNNSLSGS 262 (1002)
Q Consensus 212 ~~~~p~~l~~l~~L---------------------------~~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~ 262 (1002)
.+..|..++.+.+| +.|++++|++++..|..+.+++. |+.|+|++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 87777777766554 55555555555555555555543 66666666665532
Q ss_pred cCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCC-----CCc----cccccccccchhccccccCc
Q 037042 263 LQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSG-----FIP----STFGNLRNLKRLGLNNNHLT 333 (1002)
Q Consensus 263 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p----~~~~~l~~L~~L~L~~N~l~ 333 (1002)
. ...|..+++|++|+|++|++++..|..|.++++|++|+|++|...+ .+| ..|+.+++|++|++++|+++
T Consensus 264 ~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 264 G-NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp C-TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred C-cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 2 2234555666666666666665555566666666666666554332 112 24555666666666666666
Q ss_pred cchhhhhhhcccCCCCCCcEEeCCCCCCCCccc-ccccccc-cccccEEecCCCCCCCCCCcccCCCCCccEEEccCCcc
Q 037042 334 SLTLELSFLSSLSNCKYLEFIDLSSNSIDGILS-RKSVGNL-SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNL 411 (1002)
Q Consensus 334 ~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~~~-~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 411 (1002)
.++.. .|.++++|++|++++|.+..... ...+..+ ..+|+.|++++|++++..|..|..+++|+.|+|++|++
T Consensus 343 ~~~~~-----~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 417 (680)
T 1ziw_A 343 GIKSN-----MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEI 417 (680)
T ss_dssp CCCTT-----TTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCChh-----HhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcC
Confidence 55432 25556666666666665432111 1111111 13566666666666666666666666666666666666
Q ss_pred CccCC-ccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCC--ccCCccccCCccCcccccccccccccCC
Q 037042 412 NGSIP-ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS--GSIPACFGDLASLRNLSLASNELISVIP 488 (1002)
Q Consensus 412 ~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 488 (1002)
++.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|+.|++++|+++++.+
T Consensus 418 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~ 497 (680)
T 1ziw_A 418 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIND 497 (680)
T ss_dssp EEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCT
T ss_pred ccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCCh
Confidence 55444 45666666666666666666555666666666666666666654 3455666666666666666666666655
Q ss_pred ccccccccCceeeccCCCCCCCC--------cccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCC
Q 037042 489 STFWNLKDILYLNLSSNSLTGPL--------PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP 560 (1002)
Q Consensus 489 ~~~~~l~~L~~L~Ls~N~l~~~~--------~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 560 (1002)
..|.++++|++|++++|++++.. +..|.++++|+.|+|++|+++.+.+..|.++++|+.|+|++|+|++..+
T Consensus 498 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 577 (680)
T 1ziw_A 498 DMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577 (680)
T ss_dssp TTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred hhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCH
Confidence 56666666666666666665421 1225556666666666666665444556666666666666666665555
Q ss_pred cccccccccceeccccccccCCCccccc-CCCccceeeCCCCcCcccCCC
Q 037042 561 DSFGDLMSLKSLNLSNNNLSGSIPVSLE-KLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 561 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
..|..+++|+.|+|++|+|++..|..+. .+++|+.|+|++|++.+..+.
T Consensus 578 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred hHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 5566666666666666666655555554 456666666666666665543
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-59 Score=576.30 Aligned_cols=564 Identities=24% Similarity=0.261 Sum_probs=443.3
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.+|.++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..| ..|.++++|++|+|++|
T Consensus 8 ~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEP-ELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp EEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCT-THHHHCTTCCEEECCSS
T ss_pred eeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCH-HHHhcccCcCEEECCCC
Confidence 5777888887 6888776 799999999999998888889999999999999999996555 45578999999999999
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIP 216 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p 216 (1002)
++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..+..+ ........+.+++|.+.+..|
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ-VQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSS-SCCTTCCEEECCSSCCCCBCH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhh-cccccCCEEEccCCcccccCH
Confidence 9997666689999999999999999998778899999999999999999998655433 345566778888888776666
Q ss_pred cccc--CccccceeeccCccccccccccccccccc---------------------------ceeecccCCCccccCCcc
Q 037042 217 NEIG--NLRNLEVLALGLNKLVGVIPAEIFNMSTI---------------------------QGVGLQNNSLSGSLQSIP 267 (1002)
Q Consensus 217 ~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L---------------------------~~L~L~~N~l~~~~~~~~ 267 (1002)
..++ .+++|++|++++|++++..|..+..+.+| +.|++++|++++..+ ..
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~-~~ 241 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN-TT 241 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECT-TT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccCh-hH
Confidence 6654 45889999999999988888877766544 445555555543322 22
Q ss_pred ccCCC--ccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCc------cchhhh
Q 037042 268 YVRLP--NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT------SLTLEL 339 (1002)
Q Consensus 268 ~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~------~l~~~~ 339 (1002)
|..++ +|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|+.|++++|... .+|.-
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i- 320 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI- 320 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEE-
T ss_pred hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccccc-
Confidence 33333 3777777777776666666666777777777777777666667777777777777665433 11100
Q ss_pred hhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCC--CcccCCC--CCccEEEccCCccCccC
Q 037042 340 SFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSI--PEEIGNL--TNLIGFYLGGNNLNGSI 415 (1002)
Q Consensus 340 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~--p~~~~~l--~~L~~L~L~~N~l~~~~ 415 (1002)
....|..+++|++|++++|.+.++.+. .+.. .++|++|++++|.++... +..|..+ ++|+.|++++|++++..
T Consensus 321 -~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~-l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 321 -DDFSFQWLKCLEHLNMEDNDIPGIKSN-MFTG-LINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp -CTTTTTTCTTCCEEECCSCCBCCCCTT-TTTT-CTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred -ChhhcccCCCCCEEECCCCccCCCChh-Hhcc-ccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 001366777777777777777765432 1222 346777787777654322 2233333 47888888888888888
Q ss_pred CccccCCCCCCEEEccCCcccccCC-ccccCCccccEEEccCCcCCccCCccccCCccCccccccccccc--ccCCcccc
Q 037042 416 PITLGKLQKLQVLYFPDNKLEGSIP-DEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELI--SVIPSTFW 492 (1002)
Q Consensus 416 p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~ 492 (1002)
|..|..+++|+.|+|++|.+++.+| ..+.++++|++|++++|++.+..+..|..+++|+.|++++|.+. +..|..|.
T Consensus 398 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~ 477 (680)
T 1ziw_A 398 SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 477 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTT
T ss_pred hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccc
Confidence 8899999999999999999987666 67888999999999999999888899999999999999999886 56788999
Q ss_pred ccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCc--------ccccCCccccEEEccCeeecccCCcccc
Q 037042 493 NLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP--------NAIGGIKDLQFLFLEYNILQGSIPDSFG 564 (1002)
Q Consensus 493 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 564 (1002)
++++|++|++++|++++..+..|.++++|+.|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.
T Consensus 478 ~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 557 (680)
T 1ziw_A 478 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcc
Confidence 99999999999999998888889999999999999999987532 2478999999999999999966666799
Q ss_pred cccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC-C-CCCCCccccccCCCCCCCC
Q 037042 565 DLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG-G-SFGNFSAESFEGNKLLCGS 630 (1002)
Q Consensus 565 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~-~~~~~~~~~~~~n~~~c~~ 630 (1002)
++++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.+|.. + .+..+....+.||++.|.-
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 9999999999999999877778899999999999999999877642 1 3566777889999999853
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-61 Score=585.14 Aligned_cols=494 Identities=17% Similarity=0.234 Sum_probs=299.1
Q ss_pred CCCChhHHHHHHHHHHhccCCCCCcc------ccCCCCCCCCCcc---cccEeeCCCCcEEEEEeCCCCCccccCcccCC
Q 037042 5 TSNITTDLDALHALKTHITNDPTNFF------AKNWNSSISFCNW---TGVTCDVHSHRVTALNISHLSLSGTIPSRLGN 75 (1002)
Q Consensus 5 ~~~~~~~~~~l~~~k~~~~~~~~~~~------~~~w~~~~~~c~w---~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~ 75 (1002)
+.....|++||.++|+++..+.+.+. ..+|+.+.+||.| .||+|+.. +||+.|+|++++++|.+|++|++
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGG
T ss_pred hhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhc
Confidence 34446799999999999866555421 1379999999999 99999876 89999999999999999999999
Q ss_pred CCCCCEEEcccCCC------CC------CCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCC---------
Q 037042 76 LSSLQSLFLHSNQF------SG------SIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLS--------- 134 (1002)
Q Consensus 76 l~~L~~L~L~~N~l------~~------~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls--------- 134 (1002)
|++|++|+|++|.+ .| .+|... +.+|+ +++++|.+.+.+|..+...+..+..+++.
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 99999999999987 33 455554 67788 99999999988887664222222222222
Q ss_pred -----------CCcccccCCccccCCCCCceEEcccccCCCC-----------------Cccccc--cccccceeeeccc
Q 037042 135 -----------KNMFHGGIPSALSNCTYLRILRLSYNDFAGG-----------------IPKEIG--NLTKLEELYLSFN 184 (1002)
Q Consensus 135 -----------~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N 184 (1002)
+|+++| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 467776 677777777777777777777764 666666 6777777777776
Q ss_pred cccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcc-ccc-ccccccccccccceeecccCCCccc
Q 037042 185 GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK-LVG-VIPAEIFNMSTIQGVGLQNNSLSGS 262 (1002)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~ 262 (1002)
.+.+ .+|..++++++|++|+|++|+ +++ .+|..++.+.
T Consensus 260 ~l~~-------------------------~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~--------------- 299 (636)
T 4eco_A 260 PNLT-------------------------KLPTFLKALPEMQLINVACNRGISGEQLKDDWQALA--------------- 299 (636)
T ss_dssp TTCS-------------------------SCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHH---------------
T ss_pred cCCc-------------------------cChHHHhcCCCCCEEECcCCCCCccccchHHHHhhh---------------
Confidence 6654 466666677777777777776 666 5666665541
Q ss_pred cCCccccCCCccchhhcccccccccccc--cccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhh
Q 037042 263 LQSIPYVRLPNLEELYLWGNHFSGSIPN--FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340 (1002)
Q Consensus 263 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~ 340 (1002)
.+..+++|++|+|++|+++ .+|. .+.++++|++|+|++|+++|.+| .|+++++|++|+|++|+++.+|..
T Consensus 300 ----~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~-- 371 (636)
T 4eco_A 300 ----DAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPAN-- 371 (636)
T ss_dssp ----HSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTT--
T ss_pred ----ccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHh--
Confidence 0112356666666677776 5666 67777777778887777777777 777777777777777777766532
Q ss_pred hhcccCCCCC-CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCC--CccEEEccCCccCccCCc
Q 037042 341 FLSSLSNCKY-LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLT--NLIGFYLGGNNLNGSIPI 417 (1002)
Q Consensus 341 ~~~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~ 417 (1002)
+..+++ |++|++++|.++.+ |..+..++ +|+.|++++|++++.+|.
T Consensus 372 ----l~~l~~~L~~L~Ls~N~l~~l---------------------------p~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 420 (636)
T 4eco_A 372 ----FCGFTEQVENLSFAHNKLKYI---------------------------PNIFDAKSVSVMSAIDFSYNEIGSVDGK 420 (636)
T ss_dssp ----SEEECTTCCEEECCSSCCSSC---------------------------CSCCCTTCSSCEEEEECCSSCTTTTTTC
T ss_pred ----hhhhcccCcEEEccCCcCccc---------------------------chhhhhcccCccCEEECcCCcCCCcchh
Confidence 455555 66666666655532 22332222 444444444444444444
Q ss_pred ccc-------CCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCcccc-------CCccCcccccccccc
Q 037042 418 TLG-------KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFG-------DLASLRNLSLASNEL 483 (1002)
Q Consensus 418 ~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l 483 (1002)
.|. .+++|++|+|++|+++...+..+..+++|+.|+|++|+++.+.+..+. ++++|+.|+|++|++
T Consensus 421 ~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 421 NFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp SSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred hhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcC
Confidence 443 333444444444444422222222344444444444444421111111 111333333333333
Q ss_pred cccCCcccc--ccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCc
Q 037042 484 ISVIPSTFW--NLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD 561 (1002)
Q Consensus 484 ~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 561 (1002)
+. +|..+. .+++|+.|+|++|++++ +|..+.++++|+.|+|++|+ ++++|++.+.+|.
T Consensus 501 ~~-lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~ 560 (636)
T 4eco_A 501 TK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPE 560 (636)
T ss_dssp CB-CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCT
T ss_pred Cc-cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc------------------ccccCcccccChH
Confidence 31 222222 33333333333333333 33333333333333333322 2245666666666
Q ss_pred ccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcc
Q 037042 562 SFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 562 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
.|+.+++|+.|+|++|+| +.+|..+. ++|+.|+|++|++..
T Consensus 561 ~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 561 GITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp TGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred HHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 666666666666666666 35565544 566677777776653
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-59 Score=565.37 Aligned_cols=516 Identities=22% Similarity=0.183 Sum_probs=395.9
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
.++.|+|++|.+++..|..|+++++|++|+|++|++++..|.+|.++++|++|+|++|++++..|.. ++++++|++|+|
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L 112 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETA-LSGPKALKHLFF 112 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTT-TSSCTTCCEEEC
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhh-hcccccccEeec
Confidence 5667777777777666666777777777777777777666667777777777777777776444433 356777777777
Q ss_pred CCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccC
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKC 213 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~ 213 (1002)
++|++++..|..|+++++|++|+|++|++++..++.+.++++|++|+|++|.+++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------------- 167 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY------------------------- 167 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE-------------------------
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc-------------------------
Confidence 7777776556666777777777777777765333334446777777777776664
Q ss_pred CCCccccCccccc--eeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccc-----cccc
Q 037042 214 EIPNEIGNLRNLE--VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGN-----HFSG 286 (1002)
Q Consensus 214 ~~p~~l~~l~~L~--~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N-----~l~~ 286 (1002)
..|..++.+++|+ .|++++|++++..|..+. ..+|+.|++++|.... ..+..+.++....+..+ ....
T Consensus 168 ~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~----~~~~~l~~~~l~~l~~~~~~~~~~~~ 242 (606)
T 3t6q_A 168 LSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLL----VIFKGLKNSTIQSLWLGTFEDMDDED 242 (606)
T ss_dssp ECHHHHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHH----HHHHHTTTCEEEEEECCCCTTSCCCC
T ss_pred cChhhhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhHH----HHhhhccccchhheechhhccccccc
Confidence 2344556666666 677777777765555443 3567777777665210 00111111111111111 1111
Q ss_pred cccccccccC--CCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCc
Q 037042 287 SIPNFIFNAS--KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGI 364 (1002)
Q Consensus 287 ~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 364 (1002)
..+..+..+. +|++|++++|+++++.+..|+++++|++|+|++|+++.+|.. +.++++|++|++++|.+.++
T Consensus 243 i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~------l~~l~~L~~L~l~~n~l~~~ 316 (606)
T 3t6q_A 243 ISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSG------LVGLSTLKKLVLSANKFENL 316 (606)
T ss_dssp CCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSS------CCSCTTCCEEECTTCCCSBG
T ss_pred cChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChh------hcccccCCEEECccCCcCcC
Confidence 2223333332 789999999999998888899999999999999999988753 67889999999999999876
Q ss_pred ccccccccccccccEEecCCCCCCCCCCc-ccCCCCCccEEEccCCccCccC--CccccCCCCCCEEEccCCcccccCCc
Q 037042 365 LSRKSVGNLSHSLKIFDMSDCNVSGSIPE-EIGNLTNLIGFYLGGNNLNGSI--PITLGKLQKLQVLYFPDNKLEGSIPD 441 (1002)
Q Consensus 365 ~~~~~~~~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~ 441 (1002)
.+. .+.. .++|+.|++++|.+.+.+|. .+..+++|++|++++|++++.. |..+..+++|++|++++|++.+..|.
T Consensus 317 ~~~-~~~~-l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 394 (606)
T 3t6q_A 317 CQI-SASN-FPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTE 394 (606)
T ss_dssp GGG-CGGG-CTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTT
T ss_pred chh-hhhc-cCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHH
Confidence 442 2333 35799999999999877665 4899999999999999999776 78899999999999999999999999
Q ss_pred cccCCccccEEEccCCcCCccCCc-cccCCccCcccccccccccccCCccccccccCceeeccCCCCCC---CCcccccc
Q 037042 442 EVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG---PLPLEIGN 517 (1002)
Q Consensus 442 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~ 517 (1002)
.+..+++|+.|++++|++++..|. .|..+++|+.|++++|.+.+..|..|.++++|++|++++|++++ ..+..+..
T Consensus 395 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 474 (606)
T 3t6q_A 395 AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQT 474 (606)
T ss_dssp TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGG
T ss_pred HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhcc
Confidence 999999999999999999877654 48999999999999999999999999999999999999999986 23467899
Q ss_pred cccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceee
Q 037042 518 LKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLN 597 (1002)
Q Consensus 518 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 597 (1002)
+++|+.|++++|++++..|.+|+++++|+.|+|++|++++.+|..|..+++| .|+|++|++++.+|..+..+++|+.|+
T Consensus 475 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~ 553 (606)
T 3t6q_A 475 LGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTIN 553 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEE
T ss_pred CCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEe
Confidence 9999999999999999999999999999999999999999999999999999 999999999998898899999999999
Q ss_pred CCCCcCcccCCC
Q 037042 598 LSFNKLEGEIPK 609 (1002)
Q Consensus 598 Ls~N~l~~~~p~ 609 (1002)
+++|++++..+.
T Consensus 554 l~~N~~~c~c~~ 565 (606)
T 3t6q_A 554 LRQNPLDCTCSN 565 (606)
T ss_dssp CTTCCEECSGGG
T ss_pred CCCCCccccCCc
Confidence 999999987764
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-58 Score=560.86 Aligned_cols=512 Identities=20% Similarity=0.172 Sum_probs=367.2
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
+++.|+|++|.+++..|..++++++|++|+|++|++++..|..|.++++|++|+|++|++++..|.. |+++++|++|+|
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~L 111 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGS-FSGLTSLENLVA 111 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTS-STTCTTCCEEEC
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhh-cCCcccCCEEEc
Confidence 4555555555555544445555555555555555555545555555555555555555555333322 344555555555
Q ss_pred CCCcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCccc
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 212 (1002)
++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++++.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~----------------------- 168 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI----------------------- 168 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEE-----------------------
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceec-----------------------
Confidence 5555554444555555555555555555543 3455555555555555555555431
Q ss_pred CCCCccccCccccc----eeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccccc-
Q 037042 213 CEIPNEIGNLRNLE----VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGS- 287 (1002)
Q Consensus 213 ~~~p~~l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 287 (1002)
.|..++.+++|+ +|++++|++++..+..+... +|+.|++++|.+++......+..+++|+.+++..+.+.+.
T Consensus 169 --~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~ 245 (606)
T 3vq2_A 169 --TVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDER 245 (606)
T ss_dssp --CTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSC
T ss_pred --ChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCC
Confidence 233344444433 45555555554333333322 5555555555554332222334455555555443333211
Q ss_pred -----ccccccccC--CCCeeec-CCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCC
Q 037042 288 -----IPNFIFNAS--KLSRLEL-QKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359 (1002)
Q Consensus 288 -----~p~~~~~l~--~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N 359 (1002)
.+..+..+. +++.+++ ..|.+.+.+|. |..+++|+.|++++|.++.++ .+..+++|+.|++++|
T Consensus 246 ~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~-------~l~~~~~L~~L~l~~n 317 (606)
T 3vq2_A 246 NLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE-------DVPKHFKWQSLSIIRC 317 (606)
T ss_dssp CCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC-------CCCTTCCCSEEEEESC
T ss_pred cccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhhh-------hccccccCCEEEcccc
Confidence 111111111 3445555 77888888887 999999999999999999876 3778899999999999
Q ss_pred CCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCcc--CCccccCCCCCCEEEccCCcccc
Q 037042 360 SIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGS--IPITLGKLQKLQVLYFPDNKLEG 437 (1002)
Q Consensus 360 ~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~ 437 (1002)
.+..+. .+ ..++|+.|++++|+..+.+ .+..+++|++|++++|++++. .|..+..+++|++|++++|.+++
T Consensus 318 ~l~~lp---~~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 390 (606)
T 3vq2_A 318 QLKQFP---TL--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII 390 (606)
T ss_dssp CCSSCC---CC--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE
T ss_pred cCcccc---cC--CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc
Confidence 996553 12 3468999999999665433 678999999999999999876 48889999999999999999985
Q ss_pred cCCccccCCccccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCccccccccCceeeccCCCCCC-CCcccc
Q 037042 438 SIPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG-PLPLEI 515 (1002)
Q Consensus 438 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~ 515 (1002)
+|..+..+++|+.|++++|++.+..| ..|..+++|+.|++++|.+.+..|..|.++++|++|++++|++++ .+|..+
T Consensus 391 -~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 469 (606)
T 3vq2_A 391 -MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVF 469 (606)
T ss_dssp -ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC
T ss_pred -chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhh
Confidence 66889999999999999999998877 789999999999999999999999999999999999999999997 478889
Q ss_pred cccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC-ccc
Q 037042 516 GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS-YLK 594 (1002)
Q Consensus 516 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~ 594 (1002)
..+++|+.|+|++|++++..|..|+++++|+.|+|++|++++.+|..|..+++|+.|+|++|+|+ .+|..+..++ +|+
T Consensus 470 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~ 548 (606)
T 3vq2_A 470 ANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLA 548 (606)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCC
T ss_pred ccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCc
Confidence 99999999999999999999999999999999999999999988999999999999999999999 6777788887 599
Q ss_pred eeeCCCCcCcccCCC
Q 037042 595 DLNLSFNKLEGEIPK 609 (1002)
Q Consensus 595 ~L~Ls~N~l~~~~p~ 609 (1002)
.|++++|++.+..+.
T Consensus 549 ~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 549 FFNLTNNSVACICEH 563 (606)
T ss_dssp EEECCSCCCCCSSTT
T ss_pred EEEccCCCcccCCcc
Confidence 999999999988775
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-58 Score=567.68 Aligned_cols=513 Identities=19% Similarity=0.235 Sum_probs=332.8
Q ss_pred CCCCChhHHHHHHHHHHhccCCCCCccccCCCCCC-----CC--Ccc------------cccEeeCCCCcEEEEEeCCCC
Q 037042 4 NTSNITTDLDALHALKTHITNDPTNFFAKNWNSSI-----SF--CNW------------TGVTCDVHSHRVTALNISHLS 64 (1002)
Q Consensus 4 ~~~~~~~~~~~l~~~k~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~L~l~~~~ 64 (1002)
.+.+..+|++||++||+++. +| +|+.+. +| |+| .||+|+. +++|+.|+|++++
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~-~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALD-GK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFG 334 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTT-GG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTC
T ss_pred ccccchHHHHHHHHHHHHcC-CC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCC
Confidence 34555789999999999994 45 686544 55 999 9999998 5899999999999
Q ss_pred CccccCcccCCCCCCCEEEc-ccCCCCCCCCcccccc----c-----CCcEEE-------ecccccccccC---------
Q 037042 65 LSGTIPSRLGNLSSLQSLFL-HSNQFSGSIPFSIFNI----H-----TLKLLS-------FGDNQLSGEIP--------- 118 (1002)
Q Consensus 65 l~~~~p~~l~~l~~L~~L~L-~~N~l~~~~p~~~~~l----~-----~L~~L~-------L~~N~l~~~ip--------- 118 (1002)
+.|.+|++|++|++|++|+| ++|.++|..|..-... . .++... .....+++.++
T Consensus 335 L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 335 AKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 99999999999999999999 9999988866442221 0 000000 00011111110
Q ss_pred -cccCCCCCCCCEEeCCC--CcccccCCccccCCCCCceEEcccccCCC-----------------CCccccc--ccccc
Q 037042 119 -TNICSNLPFFESLNLSK--NMFHGGIPSALSNCTYLRILRLSYNDFAG-----------------GIPKEIG--NLTKL 176 (1002)
Q Consensus 119 -~~~~~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L 176 (1002)
.........++.+.+.. |++++ +|..|+++++|++|+|++|+|+| .+|..++ ++++|
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L 493 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL 493 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred cccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC
Confidence 00012233444444444 77776 77778888888888888888776 2666655 66666
Q ss_pred ceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcc-ccc-ccccccccccccceeec
Q 037042 177 EELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK-LVG-VIPAEIFNMSTIQGVGL 254 (1002)
Q Consensus 177 ~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~L 254 (1002)
++|+|++|.+.+ .+|..|+++++|++|+|++|+ +++ .+|..++.++
T Consensus 494 ~~L~Ls~N~l~~-------------------------~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~------- 541 (876)
T 4ecn_A 494 TDVELYNCPNMT-------------------------QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA------- 541 (876)
T ss_dssp CEEEEESCTTCC-------------------------SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH-------
T ss_pred CEEECcCCCCCc-------------------------cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh-------
Confidence 666666666654 456666666666666666666 666 5666555443
Q ss_pred ccCCCccccCCccccCCCccchhhcccccccccccc--cccccCCCCeeecCCCccCCCCccccccccccchhccccccC
Q 037042 255 QNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPN--FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHL 332 (1002)
Q Consensus 255 ~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 332 (1002)
..+..+++|++|+|++|+++ .+|. .+.++++|++|+|++|+|+ .+| .|+++++|+.|+|++|++
T Consensus 542 -----------~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l 607 (876)
T 4ecn_A 542 -----------DDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQI 607 (876)
T ss_dssp -----------HCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCC
T ss_pred -----------hcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcc
Confidence 01234556777777777776 5666 6777777777777777777 555 677777777777777777
Q ss_pred ccchhhhhhhcccCCCCC-CcEEeCCCCCCCCccccccccccc-ccccEEecCCCCCCCCCCccc---C--CCCCccEEE
Q 037042 333 TSLTLELSFLSSLSNCKY-LEFIDLSSNSIDGILSRKSVGNLS-HSLKIFDMSDCNVSGSIPEEI---G--NLTNLIGFY 405 (1002)
Q Consensus 333 ~~l~~~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~ 405 (1002)
+.+|.. +..+++ |+.|+|++|.|..++ ..+.... ++|+.|+|++|++++.+|... . .+++|+.|+
T Consensus 608 ~~lp~~------l~~l~~~L~~L~Ls~N~L~~lp--~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~ 679 (876)
T 4ecn_A 608 EEIPED------FCAFTDQVEGLGFSHNKLKYIP--NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679 (876)
T ss_dssp SCCCTT------SCEECTTCCEEECCSSCCCSCC--SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEE
T ss_pred ccchHH------HhhccccCCEEECcCCCCCcCc--hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEE
Confidence 766532 566666 777777777776442 1122111 236677777777766555322 2 234777777
Q ss_pred ccCCccCccCCcc-ccCCCCCCEEEccCCcccccCCccccCC--------ccccEEEccCCcCCccCCcccc--CCccCc
Q 037042 406 LGGNNLNGSIPIT-LGKLQKLQVLYFPDNKLEGSIPDEVCRL--------AKVYQLDLSNNKLSGSIPACFG--DLASLR 474 (1002)
Q Consensus 406 L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~ 474 (1002)
|++|+++. +|.. +..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|+|+ .+|..+. .+++|+
T Consensus 680 Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~ 756 (876)
T 4ecn_A 680 LSYNEIQK-FPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLS 756 (876)
T ss_dssp CCSSCCCS-CCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCC
T ss_pred ccCCcCCc-cCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcC
Confidence 77777773 4443 446777777777777777 455443332 26777777777776 4566555 667777
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|+|++|++++ +|..+.++++|+.|+|++|+ ++++|++.+.+|..|.++++|+.|+|++|+
T Consensus 757 ~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~ 817 (876)
T 4ecn_A 757 NMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSND 817 (876)
T ss_dssp EEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred EEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCC
Confidence 77777777766 46666667777777776654 445566777777777777777777777777
Q ss_pred ecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCc
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1002)
| +.+|..+. ++|+.|+|++|++....+..+.....+..+.|++|++.
T Consensus 818 L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 818 I-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp C-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred C-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 7 46666554 46777777777776555555555555556666666554
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-57 Score=550.86 Aligned_cols=530 Identities=20% Similarity=0.217 Sum_probs=458.1
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.++.++.+++ .+|..+.. ++++|+|++|.+++..|..|+++++|++|+|++|++.+..| ..|.++++|++|+|++|
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n 91 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHE-DTFQSQHRLDTLVLTAN 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECT-TTTTTCTTCCEEECTTC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeCh-hhccCccccCeeeCCCC
Confidence 5667777787 78887765 79999999999998889999999999999999999996444 45578999999999999
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIP 216 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p 216 (1002)
++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++. .+|
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~------------------------~~~ 147 (606)
T 3t6q_A 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSI------------------------KLP 147 (606)
T ss_dssp CCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCC------------------------CCC
T ss_pred cccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCccccc------------------------Ccc
Confidence 99999999999999999999999999977788899999999999999999853 224
Q ss_pred ccccCccccceeeccCcccccccccccccccccc--eeecccCCCccccCCccccCCCccchhhcccccccccccccccc
Q 037042 217 NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQ--GVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294 (1002)
Q Consensus 217 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 294 (1002)
..+ .+++|++|++++|++++..|..+..+++|+ .|++++|++++..+.. | ...+|++|++++|. .++..+..
T Consensus 148 ~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~-~-~~~~L~~L~l~~~~---~~~~~~~~ 221 (606)
T 3t6q_A 148 KGF-PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGA-F-DSAVFQSLNFGGTQ---NLLVIFKG 221 (606)
T ss_dssp TTC-CCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTT-T-TTCEEEEEECTTCS---CHHHHHHH
T ss_pred ccc-CCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhH-h-hhccccccccCCch---hHHHHhhh
Confidence 433 499999999999999998899999999999 8999999998655443 3 34689999999997 34455555
Q ss_pred cCCCCeeecCCCc-----cCCCCcccccccc--ccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccc
Q 037042 295 ASKLSRLELQKNS-----FSGFIPSTFGNLR--NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSR 367 (1002)
Q Consensus 295 l~~L~~L~L~~N~-----l~~~~p~~~~~l~--~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~ 367 (1002)
+.++....+.-+. ...+.+..|..+. +|+.|++++|.++.++.. .|..+++|++|++++|.++.++.
T Consensus 222 l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~lp~- 295 (606)
T 3t6q_A 222 LKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN-----TFHCFSGLQELDLTATHLSELPS- 295 (606)
T ss_dssp TTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT-----TTTTCTTCSEEECTTSCCSCCCS-
T ss_pred ccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH-----HhccccCCCEEeccCCccCCCCh-
Confidence 5555444443322 2234455666665 899999999999998864 38899999999999999997643
Q ss_pred cccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCc-cccCCCCCCEEEccCCcccccC--Ccccc
Q 037042 368 KSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSI--PDEVC 444 (1002)
Q Consensus 368 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~ 444 (1002)
.+.. .++|++|++++|++.+..|..+..+++|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. +..+.
T Consensus 296 -~l~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 373 (606)
T 3t6q_A 296 -GLVG-LSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373 (606)
T ss_dssp -SCCS-CTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTT
T ss_pred -hhcc-cccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcc
Confidence 2333 35899999999999998899999999999999999999976665 5999999999999999999776 78899
Q ss_pred CCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCc-cccccccCceeeccCCCCCCCCccccccccccee
Q 037042 445 RLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523 (1002)
Q Consensus 445 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 523 (1002)
.+++|++|++++|++.+..|..|..+++|+.|++++|++.+..+. .|.++++|++|++++|.+++..|..+..+++|++
T Consensus 374 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 453 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQH 453 (606)
T ss_dssp TCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCE
T ss_pred cCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCE
Confidence 999999999999999999999999999999999999999987665 4899999999999999999999999999999999
Q ss_pred eeCCCCccCcc---CcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCC
Q 037042 524 IDFSMNNFSGV---IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSF 600 (1002)
Q Consensus 524 L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1002)
|++++|++++. .+..+..+++|+.|+|++|++++.+|..|+.+++|+.|+|++|++++..|..+.++++| .|+|++
T Consensus 454 L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~ 532 (606)
T 3t6q_A 454 LNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLAS 532 (606)
T ss_dssp EECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCS
T ss_pred EECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcC
Confidence 99999999873 34679999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CcCcccCCCC-CCCCCCccccccCCCCCCC
Q 037042 601 NKLEGEIPKG-GSFGNFSAESFEGNKLLCG 629 (1002)
Q Consensus 601 N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~ 629 (1002)
|++++.+|.. ..+..+....+.||++.|.
T Consensus 533 N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 533 NHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp SCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred CcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 9999877753 3445666778899998884
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-57 Score=565.87 Aligned_cols=521 Identities=20% Similarity=0.173 Sum_probs=428.2
Q ss_pred CcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCC-CcccccccCCcEEEecccccccccCc
Q 037042 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSI-PFSIFNIHTLKLLSFGDNQLSGEIPT 119 (1002)
Q Consensus 41 c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ip~ 119 (1002)
|.|+.|.+ ...+++.|||++|.+++..|..++++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++.+..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 57888887 4467889999999998888888999999999999988776666 77888899999999999998865554
Q ss_pred ccCCCCCCCCEEeCCCCcccccCCcc--ccCCCCCceEEcccccCCCCCc-cccccccccceeeeccccccccccchhhH
Q 037042 120 NICSNLPFFESLNLSKNMFHGGIPSA--LSNCTYLRILRLSYNDFAGGIP-KEIGNLTKLEELYLSFNGLQGAYDHGFLQ 196 (1002)
Q Consensus 120 ~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 196 (1002)
. |.++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++
T Consensus 92 ~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~-------- 162 (844)
T 3j0a_A 92 A-FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL-------- 162 (844)
T ss_dssp S-SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC--------
T ss_pred H-ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe--------
Confidence 4 467889999999999988766654 8889999999999998887654 578889999999999888875
Q ss_pred HhhhchhhcccCCcccCCCCccccCc--cccceeeccCcccccccccccccccc------cceeecccCCCccccCCccc
Q 037042 197 IFVKNIFVQFSHNFSKCEIPNEIGNL--RNLEVLALGLNKLVGVIPAEIFNMST------IQGVGLQNNSLSGSLQSIPY 268 (1002)
Q Consensus 197 ~~~~~~~~~~~~n~~~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~~~~~~ 268 (1002)
..|..++.+ ++|+.|+|+.|.+++..|..+..+.+ |+.|++++|.+++.++....
T Consensus 163 -----------------~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 225 (844)
T 3j0a_A 163 -----------------VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFS 225 (844)
T ss_dssp -----------------CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGG
T ss_pred -----------------eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHH
Confidence 345666666 78999999999999888887776665 89999999988765543322
Q ss_pred c--CCCccchhhcc---------ccccccccccccccc--CCCCeeecCCCccCCCCccccccccccchhccccccCccc
Q 037042 269 V--RLPNLEELYLW---------GNHFSGSIPNFIFNA--SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335 (1002)
Q Consensus 269 ~--~l~~L~~L~Ls---------~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l 335 (1002)
. ....++.|.++ .|.+.+..+..|..+ ++|++|+|++|.+.+..|..|..+++|+.|+|++|+++.+
T Consensus 226 ~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 305 (844)
T 3j0a_A 226 NAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKI 305 (844)
T ss_dssp GTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEE
T ss_pred hhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCC
Confidence 1 22456666665 334444444555554 7899999999999999999999999999999999999988
Q ss_pred hhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccC
Q 037042 336 TLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI 415 (1002)
Q Consensus 336 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 415 (1002)
+.. .|.++++|++|+|++|.+.++.+. .+.. .++|+.|++++|++.+..+..|.++++|+.|+|++|.+++.
T Consensus 306 ~~~-----~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~-l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i- 377 (844)
T 3j0a_A 306 ADE-----AFYGLDNLQVLNLSYNLLGELYSS-NFYG-LPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI- 377 (844)
T ss_dssp CTT-----TTTTCSSCCEEEEESCCCSCCCSC-SCSS-CTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-
T ss_pred ChH-----HhcCCCCCCEEECCCCCCCccCHH-HhcC-CCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-
Confidence 653 488999999999999999877543 2333 35799999999999988888999999999999999999843
Q ss_pred CccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCc-cccc
Q 037042 416 PITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPS-TFWN 493 (1002)
Q Consensus 416 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~ 493 (1002)
..+++|+.|++++|+++ .+|.. ..+++.|++++|++++... ..+..+++|+.|+|++|++++..+. .+..
T Consensus 378 ----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 449 (844)
T 3j0a_A 378 ----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE 449 (844)
T ss_dssp ----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCS
T ss_pred ----cCCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccccc
Confidence 23889999999999998 55544 4578999999999986532 3456899999999999999876554 4667
Q ss_pred cccCceeeccCCCCC-----CCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccc
Q 037042 494 LKDILYLNLSSNSLT-----GPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMS 568 (1002)
Q Consensus 494 l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 568 (1002)
+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 899999999999997 44556789999999999999999999999999999999999999999988777776 89
Q ss_pred cceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC
Q 037042 569 LKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 569 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
|+.|+|++|+|++.+|..| .+|+.|++++|++.|..+..
T Consensus 528 L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCC
T ss_pred ccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccH
Confidence 9999999999999988776 47889999999999987753
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-56 Score=539.51 Aligned_cols=488 Identities=21% Similarity=0.197 Sum_probs=427.8
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|+|++|.+++..|..|+++++|++|+|++|.+++..|.+|+++++|++|+|++|++++ +|...++++++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLAS-LESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCC-SSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccc-ccccccCCCCCCCEEe
Confidence 479999999999998889999999999999999999998889999999999999999999984 5544568999999999
Q ss_pred CCCCcccc-cCCccccCCCCCceEEcccccCCCCCccccccccccc----eeeeccccccccccchhhHHhhhchhhccc
Q 037042 133 LSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE----ELYLSFNGLQGAYDHGFLQIFVKNIFVQFS 207 (1002)
Q Consensus 133 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~ 207 (1002)
|++|.+++ .+|..|+++++|++|+|++|++++..|..|+.+++|+ +|++++|.+++
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~------------------- 195 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF------------------- 195 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCE-------------------
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcce-------------------
Confidence 99999986 6799999999999999999999988888999988876 79999999984
Q ss_pred CCcccCCCCccccCccccceeeccCcccc-cccccccccccccceeecccCCCccc--cC---CccccCCC--ccchhhc
Q 037042 208 HNFSKCEIPNEIGNLRNLEVLALGLNKLV-GVIPAEIFNMSTIQGVGLQNNSLSGS--LQ---SIPYVRLP--NLEELYL 279 (1002)
Q Consensus 208 ~n~~~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~--~~---~~~~~~l~--~L~~L~L 279 (1002)
+|.......+|++|++++|.++ +..|..+.+++.|+.+++..+.+.+. ++ ...+..+. .++.+++
T Consensus 196 -------~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 196 -------IQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp -------ECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred -------eCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 4444444458999999999997 56788899999999999877665421 11 11111121 3556666
Q ss_pred -ccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCC
Q 037042 280 -WGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSS 358 (1002)
Q Consensus 280 -s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~ 358 (1002)
..|.+.+.+|. +..+++|+.|++++|.+..+ | .+..+++|++|++++|+++.+|. + .+++|+.|++++
T Consensus 269 ~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~~L~~L~l~~n~l~~lp~-------~-~l~~L~~L~l~~ 337 (606)
T 3vq2_A 269 TYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-DVPKHFKWQSLSIIRCQLKQFPT-------L-DLPFLKSLTLTM 337 (606)
T ss_dssp CCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-CCCTTCCCSEEEEESCCCSSCCC-------C-CCSSCCEEEEES
T ss_pred cccccccccccc-cccCCCCCEEEecCccchhh-h-hccccccCCEEEcccccCccccc-------C-CCCccceeeccC
Confidence 77888888887 89999999999999999854 5 89999999999999999988762 5 889999999999
Q ss_pred CCCCCcccccccccccccccEEecCCCCCCCC--CCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCccc
Q 037042 359 NSIDGILSRKSVGNLSHSLKIFDMSDCNVSGS--IPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLE 436 (1002)
Q Consensus 359 N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 436 (1002)
|+..+.. .+. ..++|+.|++++|++++. +|..+..+++|++|++++|.+++ +|..|..+++|+.|++++|++.
T Consensus 338 n~~~~~~---~~~-~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~ 412 (606)
T 3vq2_A 338 NKGSISF---KKV-ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLK 412 (606)
T ss_dssp CSSCEEC---CCC-CCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEE
T ss_pred CcCccch---hhc-cCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccC
Confidence 9654332 222 346899999999999876 48889999999999999999985 6689999999999999999999
Q ss_pred ccCC-ccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc-cCCccccccccCceeeccCCCCCCCCccc
Q 037042 437 GSIP-DEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS-VIPSTFWNLKDILYLNLSSNSLTGPLPLE 514 (1002)
Q Consensus 437 ~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 514 (1002)
+..| ..+..+++|+.|++++|++++..|..|..+++|+.|++++|++.+ .+|..|.++++|++|++++|++++..|..
T Consensus 413 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 492 (606)
T 3vq2_A 413 RVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGV 492 (606)
T ss_dssp STTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred CccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhh
Confidence 8887 689999999999999999999999999999999999999999998 57899999999999999999999999999
Q ss_pred ccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCccccccc-ccceeccccccccCCCc
Q 037042 515 IGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM-SLKSLNLSNNNLSGSIP 584 (1002)
Q Consensus 515 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p 584 (1002)
|.++++|+.|+|++|++++.+|..|.++++|+.|+|++|+|+ .+|..+..++ +|+.|++++|++.+..+
T Consensus 493 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 493 FDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred hcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 999999999999999999999999999999999999999999 5777799997 59999999999997544
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-53 Score=533.71 Aligned_cols=486 Identities=22% Similarity=0.219 Sum_probs=414.9
Q ss_pred CcEEEEEeCCCCCcccc-CcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcc-cCCCCCCCCE
Q 037042 53 HRVTALNISHLSLSGTI-PSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTN-ICSNLPFFES 130 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~-~~~~l~~L~~ 130 (1002)
.+++.|||++|.+.+.+ |..++++++|++|+|++|.+++..|..|.++++|++|+|++|.+++.+|.. .+.++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 47899999999888888 678999999999999999999999999999999999999999999876654 5789999999
Q ss_pred EeCCCCcccccCC-ccccCCCCCceEEcccccCCCCCccccccc--cccceeeeccccccccccchhhHHhhhchhhccc
Q 037042 131 LNLSKNMFHGGIP-SALSNCTYLRILRLSYNDFAGGIPKEIGNL--TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFS 207 (1002)
Q Consensus 131 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~ 207 (1002)
|+|++|.+++..| ..|+++++|++|+|++|.+++..|..|..+ ++|+.|+|+.|.+++.
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~------------------ 189 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSR------------------ 189 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCC------------------
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccc------------------
Confidence 9999999997755 589999999999999999999999999988 8999999999999863
Q ss_pred CCcccCCCCccccCcc------ccceeeccCcccccccccccccc---cccceeecccCCCcc--------ccCCccccC
Q 037042 208 HNFSKCEIPNEIGNLR------NLEVLALGLNKLVGVIPAEIFNM---STIQGVGLQNNSLSG--------SLQSIPYVR 270 (1002)
Q Consensus 208 ~n~~~~~~p~~l~~l~------~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~--------~~~~~~~~~ 270 (1002)
.|..++.+. +|++|++++|++++..|..+... ++++.|.++.+.+.. .+....|..
T Consensus 190 -------~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 190 -------VSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp -------CCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred -------cccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 344444444 49999999999998888877643 568888877443321 112223333
Q ss_pred --CCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCC
Q 037042 271 --LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNC 348 (1002)
Q Consensus 271 --l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l 348 (1002)
.++|++|+|++|.+.+..|..|..+++|+.|+|++|+|+++.|..|.++++|++|+|++|+++.++. ..|.++
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-----~~~~~l 337 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS-----SNFYGL 337 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS-----CSCSSC
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH-----HHhcCC
Confidence 3789999999999999999999999999999999999999999999999999999999999998754 348899
Q ss_pred CCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEE
Q 037042 349 KYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVL 428 (1002)
Q Consensus 349 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 428 (1002)
++|++|+|++|.|.++.+. .+. -.++|+.|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..+++.|
T Consensus 338 ~~L~~L~L~~N~i~~~~~~-~~~-~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L 406 (844)
T 3j0a_A 338 PKVAYIDLQKNHIAIIQDQ-TFK-FLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLI 406 (844)
T ss_dssp TTCCEEECCSCCCCCCCSS-CSC-SCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEE
T ss_pred CCCCEEECCCCCCCccChh-hhc-CCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---cccccee
Confidence 9999999999999877543 222 246899999999999843 33889999999999998 44543 5679999
Q ss_pred EccCCcccccCC-ccccCCccccEEEccCCcCCccCCc-cccCCccCccccccccccc-----ccCCccccccccCceee
Q 037042 429 YFPDNKLEGSIP-DEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELI-----SVIPSTFWNLKDILYLN 501 (1002)
Q Consensus 429 ~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~ 501 (1002)
++++|++++... ..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.+. +..+..|.++++|+.|+
T Consensus 407 ~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~ 486 (844)
T 3j0a_A 407 HLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLY 486 (844)
T ss_dssp ECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCC
T ss_pred ecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEE
Confidence 999999996432 3456899999999999999976544 4667899999999999997 44557799999999999
Q ss_pred ccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccC
Q 037042 502 LSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 502 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 581 (1002)
|++|++++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..|. +|+.|++++|++.+
T Consensus 487 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 487 LNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFIC 561 (844)
T ss_dssp CCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCC
T ss_pred CCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCccc
Confidence 999999999999999999999999999999998888777 8999999999999999998764 78899999999987
Q ss_pred CCc
Q 037042 582 SIP 584 (1002)
Q Consensus 582 ~~p 584 (1002)
..+
T Consensus 562 ~c~ 564 (844)
T 3j0a_A 562 ECE 564 (844)
T ss_dssp SSS
T ss_pred ccc
Confidence 543
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-53 Score=510.77 Aligned_cols=497 Identities=20% Similarity=0.211 Sum_probs=375.3
Q ss_pred CCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCc
Q 037042 40 FCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPT 119 (1002)
Q Consensus 40 ~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~ 119 (1002)
.|.|.|| ||. ++++++ .+|+.+. ++|++|+|++|++++..|..|.++++|++|+|++|++++ ++.
T Consensus 3 ~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~ 67 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT-IEG 67 (549)
T ss_dssp EECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCE-ECT
T ss_pred cCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCc-cCh
Confidence 4999999 975 345666 6777665 789999999999998888899999999999999999985 444
Q ss_pred ccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHh
Q 037042 120 NICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIF 198 (1002)
Q Consensus 120 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 198 (1002)
..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|.+.+
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~---------- 137 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFS---------- 137 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC----------
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCcccc----------
Confidence 555789999999999999998777789999999999999999986 467789999999999999998443
Q ss_pred hhchhhcccCCcccCCCC-ccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchh
Q 037042 199 VKNIFVQFSHNFSKCEIP-NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277 (1002)
Q Consensus 199 ~~~~~~~~~~n~~~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 277 (1002)
.+| ..++++++|++|++++|++++..|..+..+++|+.|++++|.+. .++...+..+++|++|
T Consensus 138 ---------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L 201 (549)
T 2z81_A 138 ---------------EIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYL 201 (549)
T ss_dssp ---------------EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEE
T ss_pred ---------------ccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEE
Confidence 344 57888999999999999999888999999999999999988875 3333334567888888
Q ss_pred hcccccccccc--c-ccccccCCCCeeecCCCccCCCCcc----ccccccccchhccccccCccchhh-hhhhcccCCCC
Q 037042 278 YLWGNHFSGSI--P-NFIFNASKLSRLELQKNSFSGFIPS----TFGNLRNLKRLGLNNNHLTSLTLE-LSFLSSLSNCK 349 (1002)
Q Consensus 278 ~Ls~N~l~~~~--p-~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~l~~~-~~~~~~l~~l~ 349 (1002)
+|++|++++.. | .....+++|+.|++++|.+++..+. .+..+++|+.|++++|.+..++.- ......+..+.
T Consensus 202 ~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~ 281 (549)
T 2z81_A 202 ELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELG 281 (549)
T ss_dssp EEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCT
T ss_pred EccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhc
Confidence 88888887642 1 2223467788888888877765443 335566777777777776654210 00012234555
Q ss_pred CCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccc-cCCCCCCEE
Q 037042 350 YLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITL-GKLQKLQVL 428 (1002)
Q Consensus 350 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L 428 (1002)
+|+.|+++++.+...... ..++..+...++|+.|++++|++. .+|..+ .++++|++|
T Consensus 282 ~L~~L~l~~~~i~~~~~~---------------------~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L 339 (549)
T 2z81_A 282 KVETVTIRRLHIPQFYLF---------------------YDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFL 339 (549)
T ss_dssp TCCEEEEESCBCSCGGGS---------------------CCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEE
T ss_pred ccccccccccccchhhhc---------------------ccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEE
Confidence 666666666554422100 011222334567778888888876 455554 567888888
Q ss_pred EccCCcccccCC---ccccCCccccEEEccCCcCCccCC--ccccCCccCcccccccccccccCCccccccccCceeecc
Q 037042 429 YFPDNKLEGSIP---DEVCRLAKVYQLDLSNNKLSGSIP--ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503 (1002)
Q Consensus 429 ~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 503 (1002)
+|++|++++.+| ..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|++++ +|..+..+++|++|+++
T Consensus 340 ~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls 418 (549)
T 2z81_A 340 DLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLS 418 (549)
T ss_dssp ECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECT
T ss_pred EccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEECC
Confidence 888888877654 336677888888888888876533 457788888888888888874 57778888888888888
Q ss_pred CCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCC
Q 037042 504 SNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583 (1002)
Q Consensus 504 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 583 (1002)
+|++++ +|..+ .++|+.|++++|+|++.+ .++++|+.|+|++|+|+ .+|. ...+++|+.|+|++|+|++.+
T Consensus 419 ~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~ 489 (549)
T 2z81_A 419 STGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVP 489 (549)
T ss_dssp TSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCC
T ss_pred CCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcC
Confidence 888875 34333 257899999999998753 57889999999999998 5675 567899999999999999988
Q ss_pred cccccCCCccceeeCCCCcCcccCCC
Q 037042 584 PVSLEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 584 p~~~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
|..+..+++|+.|+|++|+++|.+|.
T Consensus 490 ~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 490 DGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp TTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred HHHHhcCcccCEEEecCCCccCCCcc
Confidence 88899999999999999999998884
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-52 Score=504.16 Aligned_cols=492 Identities=20% Similarity=0.218 Sum_probs=310.7
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
+++.|+|++|++++..+.+++++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|...|.++++|++|+|
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEEC
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC-ccCHhhhcCccccccccc
Confidence 3455555555555444445555555555555555555444444555555555555555554 233333344555555555
Q ss_pred CCCcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCccc
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 212 (1002)
++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++++
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~------------------------ 163 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS------------------------ 163 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCE------------------------
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccce------------------------
Confidence 5555553333345555555555555555543 244555555555555555555443
Q ss_pred CCCCccccCcccc----ceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccc---
Q 037042 213 CEIPNEIGNLRNL----EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS--- 285 (1002)
Q Consensus 213 ~~~p~~l~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~--- 285 (1002)
..|..++.+++| +.|++++|.+++..|..+... +|+.|++++|......-...+..+++++.+.+..+.+.
T Consensus 164 -~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~ 241 (570)
T 2z63_A 164 -IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEG 241 (570)
T ss_dssp -ECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCS
T ss_pred -ecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCch
Confidence 122334444444 445555555554444444333 45555555443221110111122223332222211111
Q ss_pred ---ccccccccccC--CCCeeecCCC-ccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCC
Q 037042 286 ---GSIPNFIFNAS--KLSRLELQKN-SFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359 (1002)
Q Consensus 286 ---~~~p~~~~~l~--~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N 359 (1002)
......+..+. .++.+++++| .+.+..|..|.. +++|+.|++++|
T Consensus 242 ~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~-----------------------------l~~L~~L~l~~~ 292 (570)
T 2z63_A 242 NLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNC-----------------------------LTNVSSFSLVSV 292 (570)
T ss_dssp SCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGG-----------------------------GTTCSEEEEESC
T ss_pred hhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcC-----------------------------cCcccEEEecCc
Confidence 00111111111 1233344443 344444444444 445555555555
Q ss_pred CCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccC
Q 037042 360 SIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSI 439 (1002)
Q Consensus 360 ~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 439 (1002)
.+..+.. .+... +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++..
T Consensus 293 ~l~~l~~--~~~~~--~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~ 363 (570)
T 2z63_A 293 TIERVKD--FSYNF--GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKG 363 (570)
T ss_dssp EECSCCB--CCSCC--CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEE
T ss_pred cchhhhh--hhccC--CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccc
Confidence 5443321 12222 4556666666665 3343 4677888888888888766655 67888999999999888654
Q ss_pred --CccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCC-ccccccccCceeeccCCCCCCCCccccc
Q 037042 440 --PDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP-STFWNLKDILYLNLSSNSLTGPLPLEIG 516 (1002)
Q Consensus 440 --p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 516 (1002)
|..+..+++|++|++++|.+++..+. |..+++|+.|++++|.+.+..+ ..|.++++|++|++++|.+++..|..+.
T Consensus 364 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 442 (570)
T 2z63_A 364 CCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 442 (570)
T ss_dssp EEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred cccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhh
Confidence 67788889999999999998865555 8899999999999999988766 5788999999999999999988999999
Q ss_pred ccccceeeeCCCCccC-ccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccce
Q 037042 517 NLKVLVKIDFSMNNFS-GVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKD 595 (1002)
Q Consensus 517 ~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 595 (1002)
++++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++++|+.
T Consensus 443 ~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 522 (570)
T 2z63_A 443 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQK 522 (570)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcE
Confidence 9999999999999998 678999999999999999999999988999999999999999999999988888999999999
Q ss_pred eeCCCCcCcccCCCCC
Q 037042 596 LNLSFNKLEGEIPKGG 611 (1002)
Q Consensus 596 L~Ls~N~l~~~~p~~~ 611 (1002)
|++++|+++|.+|...
T Consensus 523 L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 523 IWLHTNPWDCSCPRID 538 (570)
T ss_dssp EECCSSCBCCCTTTTH
T ss_pred EEecCCcccCCCcchH
Confidence 9999999999998754
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-53 Score=459.39 Aligned_cols=259 Identities=31% Similarity=0.501 Sum_probs=216.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|...+.||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++++|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----
Confidence 46788899999999999999863 47889999998776666788999999999999999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccC------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
..++|||||++|+|.++++..+ ..+++.++..|+.|||+||+||| +++||||||||+|||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCC
Confidence 5689999999999999997642 36899999999999999999999 89999999999999999999
Q ss_pred cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHH
Q 037042 848 VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~ 926 (1002)
.+||+|||+|+.....+.........||+.|||||++.++.|+.++|||||||++|||+| |+.||...... +.+
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~ 240 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVI 240 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHH
Confidence 999999999997766554444445679999999999999999999999999999999999 89999764221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. .+..+.... .+..++..+.++|.+||+.||++|||++||++.|+++...
T Consensus 241 ~--------~i~~~~~~~-------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 241 E--------CITQGRVLQ-------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp H--------HHHHTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H--------HHHcCCCCC-------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 1 111111111 1234567899999999999999999999999999998764
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-52 Score=461.21 Aligned_cols=259 Identities=29% Similarity=0.484 Sum_probs=207.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|...++||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++++|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 45677789999999999999864 47889999998776667788999999999999999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccC--------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN--------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~ 845 (1002)
..++|||||++|+|.++++..+ ..+++.+++.|+.|||+||+||| +++||||||||+|||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECC
Confidence 5689999999999999997642 35899999999999999999999 899999999999999999
Q ss_pred CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHH
Q 037042 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~ 924 (1002)
++.+||+|||+|+.....+.....+...||+.|||||++.+..|+.++|||||||++|||+| |+.||...... +
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-----~ 268 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-----E 268 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----H
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 99999999999997765554444456789999999999999999999999999999999999 89999764221 1
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.+. .+..+... ..+..+++.+.++|.+||+.||++|||++||+++|+.+...
T Consensus 269 ~~~--------~i~~g~~~-------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 269 AID--------CITQGREL-------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHH--------HHHHTCCC-------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHH--------HHHcCCCC-------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 111 11111111 11234567899999999999999999999999999999764
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-51 Score=490.44 Aligned_cols=467 Identities=20% Similarity=0.200 Sum_probs=359.3
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|+|++|++++..|..++++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|...++++++|++|+
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 130 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELN 130 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCC-CSTTCSCTTCTTCCEEE
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccc-cCCCccccccccccEEe
Confidence 46999999999999887889999999999999999999888899999999999999999998 56665578999999999
Q ss_pred CCCCcccc-cCCccccCCCCCceEEcccccCCCCCcccccccccc----ceeeeccccccccccchhhHHhhhchhhccc
Q 037042 133 LSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKL----EELYLSFNGLQGAYDHGFLQIFVKNIFVQFS 207 (1002)
Q Consensus 133 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L----~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~ 207 (1002)
|++|.+++ .+|..|+++++|++|++++|++++..|..|+.+++| +.|++++|.+++.
T Consensus 131 L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~------------------ 192 (570)
T 2z63_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI------------------ 192 (570)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEE------------------
T ss_pred cCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceec------------------
Confidence 99999997 579999999999999999999998888899999999 8999999999853
Q ss_pred CCcccCCCCccccCccccceeeccCccccc-ccccccccccccceeecccCCCcc-----ccCCccccCCC--ccchhhc
Q 037042 208 HNFSKCEIPNEIGNLRNLEVLALGLNKLVG-VIPAEIFNMSTIQGVGLQNNSLSG-----SLQSIPYVRLP--NLEELYL 279 (1002)
Q Consensus 208 ~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~~l~--~L~~L~L 279 (1002)
.|..+..+ +|+.|++++|.... .+|..+.+++.++.+.+..+.+.. .++...+..++ .++.+++
T Consensus 193 -------~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 193 -------QPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp -------CTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred -------CHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 33444444 89999999986542 356667777777766655433321 12222222332 3567788
Q ss_pred ccc-cccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCC
Q 037042 280 WGN-HFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSS 358 (1002)
Q Consensus 280 s~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~ 358 (1002)
++| .+.+.+|..+..+++|++|++++|.++ .+|..+..+ +|++|++++|.++.+|. ..+++|+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~--------~~l~~L~~L~l~~ 334 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPT--------LKLKSLKRLTFTS 334 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCB--------CBCSSCCEEEEES
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCc--------ccccccCEEeCcC
Confidence 888 788889999999999999999999998 477888888 99999999999987763 3566777777777
Q ss_pred CCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccC--CccccCCCCCCEEEccCCccc
Q 037042 359 NSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI--PITLGKLQKLQVLYFPDNKLE 436 (1002)
Q Consensus 359 N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~ 436 (1002)
|.+.+.. +. ..+++|++|++++|++++.. |..+..+++|++|++++|.+.
T Consensus 335 n~~~~~~--------------------------~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~ 386 (570)
T 2z63_A 335 NKGGNAF--------------------------SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI 386 (570)
T ss_dssp CBSCCBC--------------------------CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEE
T ss_pred Ccccccc--------------------------cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccc
Confidence 7665432 22 45566666666666666443 556666677777777777766
Q ss_pred ccCCccccCCccccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCccccccccCceeeccCCCCC-CCCccc
Q 037042 437 GSIPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT-GPLPLE 514 (1002)
Q Consensus 437 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~ 514 (1002)
+..+. +..+++|+.|++++|.+.+..| ..|..+++|++|++++|.+.+..|..|.++++|++|++++|.++ +.+|..
T Consensus 387 ~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~ 465 (570)
T 2z63_A 387 TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465 (570)
T ss_dssp EEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred ccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhh
Confidence 44333 6667777777777777766554 45667777777777777777777777777777777777777776 456777
Q ss_pred ccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcc
Q 037042 515 IGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPV 585 (1002)
Q Consensus 515 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 585 (1002)
+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++.+|..|..+++|+.|++++|++++..|.
T Consensus 466 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred hhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 77777788888888888777777788888888888888888877777777888888888888888776553
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-52 Score=451.51 Aligned_cols=263 Identities=24% Similarity=0.377 Sum_probs=206.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++++..++||+|+||+||+|++++ .||||+++.. .....+.|.+|++++++++|||||++++++..+. .+
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~-----~~ 107 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-----LA 107 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----CE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCe-----EE
Confidence 3567888999999999999998753 6999998743 2345678999999999999999999999986543 47
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|||||++|+|.++++..+..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+....
T Consensus 108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999999999887777999999999999999999999 89999999999999999999999999999987655
Q ss_pred CCceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..........+||+.|||||++.+ +.|+.++|||||||++|||+||+.||........ +...... ....
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-----~~~~~~~---~~~~ 256 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-----IIFMVGR---GYAS 256 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-----HHHHHHT---TCCC
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-----HHHHHhc---CCCC
Confidence 443334456789999999998753 4689999999999999999999999976422111 1100000 0111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
+... ..+..++..+.++|.+||+.+|++|||+.||+++|+.++...
T Consensus 257 p~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 257 PDLS-------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CCST-------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCcc-------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 1110 012345678999999999999999999999999999987543
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-52 Score=456.51 Aligned_cols=257 Identities=26% Similarity=0.443 Sum_probs=212.4
Q ss_pred CCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
+++..++||+|+||+||+|++. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|...+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~---- 102 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ---- 102 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC----
Confidence 4566789999999999999863 46889999997543 334678999999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~ 844 (1002)
..++|||||++|+|.+++.... ..+++..+..|+.|||+||+||| +++||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEEC
Confidence 5679999999999999996532 35899999999999999999999 89999999999999999
Q ss_pred CCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHH
Q 037042 845 DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLK 923 (1002)
Q Consensus 845 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~ 923 (1002)
+++.+||+|||+|+.....+.....+...||+.|||||++.++.|+.++|||||||++|||+| |+.||......
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~----- 254 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----- 254 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-----
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-----
Confidence 999999999999987765544444456789999999999999999999999999999999999 89999764221
Q ss_pred HHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 924 HWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 924 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+.+. .+.++... ..++.++..+.++|.+||+.||++|||++||+++|+++.+
T Consensus 255 ~~~~--------~i~~~~~~-------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 255 DVVE--------MIRNRQVL-------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp HHHH--------HHHTTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred HHHH--------HHHcCCCC-------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 1111 11111111 1133567789999999999999999999999999998754
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-49 Score=483.17 Aligned_cols=512 Identities=20% Similarity=0.168 Sum_probs=315.8
Q ss_pred EEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCC
Q 037042 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLS 134 (1002)
Q Consensus 55 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls 134 (1002)
++.|||++|+|++..|.+|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|+|+ .+|...|.++++|++|+|+
T Consensus 54 ~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 54 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECT
T ss_pred CCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECC
Confidence 455555555555444444555555555555555555444444555555555555555554 3444444555555555555
Q ss_pred CCcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccC
Q 037042 135 KNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKC 213 (1002)
Q Consensus 135 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~ 213 (1002)
+|++++..+..|+++++|++|+|++|++++ .+|..++++++|++|+|++|++++..
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~----------------------- 189 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY----------------------- 189 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC-----------------------
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccc-----------------------
Confidence 555554444445555555555555555543 23444555555555555555554321
Q ss_pred CCCccccCcccc----ceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccc------
Q 037042 214 EIPNEIGNLRNL----EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNH------ 283 (1002)
Q Consensus 214 ~~p~~l~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~------ 283 (1002)
|..+..+.++ ..++++.|.++.+.+.. .....++.+++.+|.....+....+..+..++...+..+.
T Consensus 190 --~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~ 266 (635)
T 4g8a_A 190 --CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 266 (635)
T ss_dssp --GGGGHHHHTCTTCCCEEECTTCCCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCC
T ss_pred --cccccchhhhhhhhhhhhcccCcccccCccc-ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccc
Confidence 2222222222 13344444444322222 2222334444444433322222222233333333332221
Q ss_pred ccccccccccccCCCCeeecCCCccCC---CCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCC
Q 037042 284 FSGSIPNFIFNASKLSRLELQKNSFSG---FIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNS 360 (1002)
Q Consensus 284 l~~~~p~~~~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~ 360 (1002)
+.......+.....+..+++..+.... ..+..+..+.+++.+++.+|.+..++. +.....|+.|++++|.
T Consensus 267 l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-------~~~~~~L~~L~l~~~~ 339 (635)
T 4g8a_A 267 LEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD-------FSYNFGWQHLELVNCK 339 (635)
T ss_dssp CSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGG-------GGSCCCCSEEEEESCE
T ss_pred cccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccc-------cccchhhhhhhccccc
Confidence 111222233334444444444333322 123345566677777777777766542 4556678888888887
Q ss_pred CCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccC--ccCCccccCCCCCCEEEccCCccccc
Q 037042 361 IDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN--GSIPITLGKLQKLQVLYFPDNKLEGS 438 (1002)
Q Consensus 361 l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~ 438 (1002)
+..+... ....|+.+++++|.+... ..+..+++|+.|++++|.+. +..+..+..+.+|+.|++..|.+..
T Consensus 340 ~~~~~~~-----~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~- 411 (635)
T 4g8a_A 340 FGQFPTL-----KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT- 411 (635)
T ss_dssp ESSCCCC-----BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-
T ss_pred ccCcCcc-----cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-
Confidence 7665332 234677888888876543 34557788888888888875 3456667778888888888888774
Q ss_pred CCccccCCccccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCccccccccCceeeccCCCC-CCCCccccc
Q 037042 439 IPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL-TGPLPLEIG 516 (1002)
Q Consensus 439 ~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~ 516 (1002)
.+..+..+++|+.++++.|++....+ ..|..+++++.++++.|.+.+..+..+..+++|+.|++++|++ .+..|..|.
T Consensus 412 ~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~ 491 (635)
T 4g8a_A 412 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 491 (635)
T ss_dssp ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhh
Confidence 45567788888888888877765544 4678888888888888888888888888888888888888874 445677888
Q ss_pred ccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCC-Cccce
Q 037042 517 NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL-SYLKD 595 (1002)
Q Consensus 517 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~ 595 (1002)
.+++|+.|+|++|+|++++|.+|+++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+ ++|++
T Consensus 492 ~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~ 571 (635)
T 4g8a_A 492 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 571 (635)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCE
T ss_pred hccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCE
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888887 57888
Q ss_pred eeCCCCcCcccCC
Q 037042 596 LNLSFNKLEGEIP 608 (1002)
Q Consensus 596 L~Ls~N~l~~~~p 608 (1002)
|+|++|+|++...
T Consensus 572 L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 572 LNLTQNDFACTCE 584 (635)
T ss_dssp EECTTCCBCCSGG
T ss_pred EEeeCCCCcccCC
Confidence 8888888887654
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-51 Score=447.88 Aligned_cols=252 Identities=22% Similarity=0.275 Sum_probs=210.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.|+..++||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++...+ ..|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~----~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD----ELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT----EEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----EEEEE
Confidence 45888999999999999999865 79999999998665555677889999999999999999999998877 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||||+||+|.+++... .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 150 mEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp ECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred EeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 9999999999999764 4899999999999999999999 8999999999999999999999999999998775443
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +... .+.+.....
T Consensus 225 ~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-----~~~~--------~i~~~~~~~ 289 (346)
T 4fih_A 225 P--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----KAMK--------MIRDNLPPR 289 (346)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHH--------HHHHSSCCC
T ss_pred C--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHH--------HHHcCCCCC
Confidence 2 234568999999999999999999999999999999999999999753211 1111 111111000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. .+..++..+.+++.+||+.||++|||++|+++|=+
T Consensus 290 ~~-----~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~ 326 (346)
T 4fih_A 290 LK-----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 326 (346)
T ss_dssp CS-----CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred CC-----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence 00 11234567899999999999999999999999855
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-50 Score=477.11 Aligned_cols=458 Identities=21% Similarity=0.232 Sum_probs=364.0
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
+.||+++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|.. |.++++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISV-FKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGG-GTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHH-hhcccCCCEEecCC
Confidence 47999999999 6888877 89999999999999888889999999999999999999655554 57899999999999
Q ss_pred CcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 214 (1002)
|+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~-------------------------- 129 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK-------------------------- 129 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--------------------------
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch--------------------------
Confidence 9999 57766 89999999999999987 578999999999999999999874
Q ss_pred CCccccCcccc--ceeeccCccc--cccccccccccc-ccceeecccCCCccccCCccccCCCccchhhccccc------
Q 037042 215 IPNEIGNLRNL--EVLALGLNKL--VGVIPAEIFNMS-TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNH------ 283 (1002)
Q Consensus 215 ~p~~l~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~------ 283 (1002)
..++.+++| ++|++++|++ .+..|..+..+. +...+++++|++.+.++...+..+++|+.|++++|.
T Consensus 130 --~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 207 (520)
T 2z7x_B 130 --SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS 207 (520)
T ss_dssp --GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTH
T ss_pred --hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccc
Confidence 234556666 9999999999 888888888766 455678888888777777777777888888888776
Q ss_pred -ccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 284 -FSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 284 -l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
+.+.+| .+..+++|+.|++++|.+++..+..+ ... ..++
T Consensus 208 ~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~-------------------~~~-------~~~~------------- 247 (520)
T 2z7x_B 208 YFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRI-------------------LQL-------VWHT------------- 247 (520)
T ss_dssp HHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHH-------------------HHH-------HHTS-------------
T ss_pred eeecchh-hhccccchhhccccccccCHHHHHHH-------------------HHH-------hhhC-------------
Confidence 554444 45555566666655555543211110 000 0012
Q ss_pred CcccccccccccccccEEecCCCCCCCCCCccc-----CCCCCccEEEccCCccCccCC-ccccCC---CCCCEEEccCC
Q 037042 363 GILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-----GNLTNLIGFYLGGNNLNGSIP-ITLGKL---QKLQVLYFPDN 433 (1002)
Q Consensus 363 ~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N 433 (1002)
+|+.|++++|++++.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|
T Consensus 248 -------------~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n 312 (520)
T 2z7x_B 248 -------------TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGT 312 (520)
T ss_dssp -------------SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESS
T ss_pred -------------cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCC
Confidence 34445555555555566666 7788888888888888 344 455544 67889999998
Q ss_pred cccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc--cCCccccccccCceeeccCCCCCCCC
Q 037042 434 KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS--VIPSTFWNLKDILYLNLSSNSLTGPL 511 (1002)
Q Consensus 434 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~ 511 (1002)
.+.+.. .+..+++|++|++++|++++..|..++.+++|++|++++|++.+ .+|..|.++++|++|++++|++++.+
T Consensus 313 ~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 313 RMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp CCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred cccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 876432 12578889999999999998888889999999999999999987 45577899999999999999999855
Q ss_pred cc-cccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCccc-ccC
Q 037042 512 PL-EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVS-LEK 589 (1002)
Q Consensus 512 ~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~ 589 (1002)
|. .+..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +|.. +..
T Consensus 391 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~ 466 (520)
T 2z7x_B 391 KKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDR 466 (520)
T ss_dssp GGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTT
T ss_pred ccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhcc
Confidence 54 488899999999999999988887765 79999999999999 788888899999999999999995 5554 899
Q ss_pred CCccceeeCCCCcCcccCCC
Q 037042 590 LSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 590 l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
+++|++|+|++|+++|..+.
T Consensus 467 l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 467 LTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp CTTCCEEECCSSCBCCCHHH
T ss_pred CCcccEEECcCCCCcccCCc
Confidence 99999999999999987764
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-50 Score=479.89 Aligned_cols=481 Identities=20% Similarity=0.233 Sum_probs=377.2
Q ss_pred CcccccEeeC--CCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccC
Q 037042 41 CNWTGVTCDV--HSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118 (1002)
Q Consensus 41 c~w~gv~c~~--~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 118 (1002)
|++.+++.-. ...+++.|+|++|++++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|++++ +|
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~ 90 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSS-LS 90 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCS-CC
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCc-cC
Confidence 5666665432 23579999999999998889999999999999999999998888999999999999999999995 55
Q ss_pred cccCCCCCCCCEEeCCCCcccc-cCCccccCCCCCceEEcccccCCCCCc-cccccccccceeeeccccccccccchhhH
Q 037042 119 TNICSNLPFFESLNLSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIP-KEIGNLTKLEELYLSFNGLQGAYDHGFLQ 196 (1002)
Q Consensus 119 ~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 196 (1002)
...++++++|++|+|++|++++ .+|..++++++|++|+|++|++.+.+| ..|.++++|++|++++|++++
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~-------- 162 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN-------- 162 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE--------
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc--------
Confidence 5555889999999999999997 467889999999999999999555665 689999999999999999986
Q ss_pred HhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCcccc--CCccccCCCcc
Q 037042 197 IFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL--QSIPYVRLPNL 274 (1002)
Q Consensus 197 ~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~l~~L 274 (1002)
.+|..++.+++|++|+++.|.+....+..+..+++|++|++++|++++.. +......+++|
T Consensus 163 -----------------~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L 225 (549)
T 2z81_A 163 -----------------YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPM 225 (549)
T ss_dssp -----------------ECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCC
T ss_pred -----------------cChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcc
Confidence 46888999999999999999997543333456899999999999998632 11223457899
Q ss_pred chhhcccccccccccc----cccccCCCCeeecCCCccCCCC------ccccccccccchhccccccCccchhhhhhhcc
Q 037042 275 EELYLWGNHFSGSIPN----FIFNASKLSRLELQKNSFSGFI------PSTFGNLRNLKRLGLNNNHLTSLTLELSFLSS 344 (1002)
Q Consensus 275 ~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~ 344 (1002)
+.|++++|++++..+. .+..+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+.....
T Consensus 226 ~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~------- 298 (549)
T 2z81_A 226 KKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL------- 298 (549)
T ss_dssp CEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG-------
T ss_pred cceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh-------
Confidence 9999999999875543 4456789999999999988642 2345778899999999998876431
Q ss_pred cCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCccc-CCCCCccEEEccCCccCccCC---cccc
Q 037042 345 LSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIP---ITLG 420 (1002)
Q Consensus 345 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~ 420 (1002)
+..++ .......+|+.|++++|++. .+|..+ ..+++|++|+|++|++++.+| ..++
T Consensus 299 ~~~l~-------------------~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 358 (549)
T 2z81_A 299 FYDLS-------------------TVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKG 358 (549)
T ss_dssp SCCCC-------------------HHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTT
T ss_pred cccch-------------------hhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhh
Confidence 11110 00111234555555555554 445444 467788888888888876653 3467
Q ss_pred CCCCCCEEEccCCcccccCC--ccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCc
Q 037042 421 KLQKLQVLYFPDNKLEGSIP--DEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498 (1002)
Q Consensus 421 ~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 498 (1002)
.+++|++|+|++|++++..+ ..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+++++.. .+ .++|+
T Consensus 359 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~-~~--~~~L~ 434 (549)
T 2z81_A 359 AWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKT-CI--PQTLE 434 (549)
T ss_dssp SSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCT-TS--CTTCS
T ss_pred ccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccc-hh--cCCce
Confidence 77888888888888875432 45777888888888888887 567777788888888888888775432 22 25788
Q ss_pred eeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceecccccc
Q 037042 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNN 578 (1002)
Q Consensus 499 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 578 (1002)
+|++++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|++++.+|..|..+++|+.|+|++|+
T Consensus 435 ~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 508 (549)
T 2z81_A 435 VLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNP 508 (549)
T ss_dssp EEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSC
T ss_pred EEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCC
Confidence 9999999988643 57888999999999998 4555 4678999999999999998888889999999999999999
Q ss_pred ccCCCc
Q 037042 579 LSGSIP 584 (1002)
Q Consensus 579 l~~~~p 584 (1002)
+++..|
T Consensus 509 ~~~~~~ 514 (549)
T 2z81_A 509 WDCSCP 514 (549)
T ss_dssp BCCCHH
T ss_pred ccCCCc
Confidence 987766
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-51 Score=448.73 Aligned_cols=252 Identities=20% Similarity=0.292 Sum_probs=203.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~----~~ 98 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG----SL 98 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC----EE
Confidence 46899999999999999999985 479999999997542 334678899999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|+|||||+||+|.+++...+. .+++..++.|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 175 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceee
Confidence 899999999999999976543 5789999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+.+. ++...
T Consensus 176 ~~~~~--~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~--------~i~~~ 240 (350)
T 4b9d_A 176 NSTVE--LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-----KNLVL--------KIISG 240 (350)
T ss_dssp CHHHH--HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHH--------HHHHT
T ss_pred cCCcc--cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHH--------HHHcC
Confidence 54321 12345799999999999999999999999999999999999999976321 11111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.... .+..++..+.+++.+||+.||++|||++|+++|=
T Consensus 241 ~~~~-------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp 278 (350)
T 4b9d_A 241 SFPP-------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKG 278 (350)
T ss_dssp CCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CCCC-------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 1110 0122456789999999999999999999999873
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-51 Score=439.68 Aligned_cols=250 Identities=24% Similarity=0.339 Sum_probs=209.2
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----~~ 107 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE----KL 107 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----EE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----EE
Confidence 5699999999999999999985 479999999997542 334578899999999999999999999998877 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|+|||||+||+|.+++.+.+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 108 yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 108 YFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp EEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 89999999999999998765 4999999999999999999999 8999999999999999999999999999999876
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+... ++....
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~--------~i~~~~ 250 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----GLIFA--------KIIKLE 250 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHHTC
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH--------HHHcCC
Confidence 54443344567899999999999999999999999999999999999999975321 11111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
... ++..+..+.+++.+||++||++|||++|++.+
T Consensus 251 ~~~--------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 251 YDF--------PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCC--------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCC--------CcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 111 11234568899999999999999999986443
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-50 Score=441.35 Aligned_cols=253 Identities=22% Similarity=0.261 Sum_probs=205.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.|+..++||+|+||+||+|+.. +|+.||||+++.... ..+|+.++++++|||||++++++.+++ ..++|
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~----~~~iv 128 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP----WVNIF 128 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT----EEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC----EEEEE
Confidence 45778889999999999999864 699999999986532 246999999999999999999998776 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~ 863 (1002)
||||+||+|.++++..+ .+++..+..++.||+.||+||| +++||||||||+|||++.+| .+||+|||+|+.+...
T Consensus 129 mEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp ECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred EeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 99999999999998765 4999999999999999999999 99999999999999999987 6999999999987643
Q ss_pred Cce---eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 864 DQF---VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 864 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
... .+....+||+.|||||++.+..|+.++||||+||++|||+||+.||........ ... +...
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~------------i~~~ 271 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLK------------IASE 271 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHH------------HHHS
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHH------------HHcC
Confidence 321 122345799999999999999999999999999999999999999976433322 111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.... ...++.++..+.+++.+||++||++|||+.|++++|.++-
T Consensus 272 ~~~~-----~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 272 PPPI-----REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp CCGG-----GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCc-----hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 1000 0112345677899999999999999999999999987654
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-50 Score=444.47 Aligned_cols=274 Identities=20% Similarity=0.251 Sum_probs=205.0
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.+|...++||+|+||+||+|++. |+.||||+++.... .....++|+..+.+++|||||+++++|...+......++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 35777899999999999999884 89999999975432 22334456666778899999999999987543222457999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-----CCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG-----YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|||++|+|.++++.. .+++..+.+++.|+|+||+|||.. +.++||||||||+|||++.++++||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999765 489999999999999999999942 1349999999999999999999999999999877
Q ss_pred cCCCcee--eeccCCCCcccccccccCCC------CcCcccchHHHHHHHHHHHhCCCCCcccccccc----------cH
Q 037042 861 TREDQFV--TQTQTPATIGYMALEYGSEG------RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM----------TL 922 (1002)
Q Consensus 861 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~----------~~ 922 (1002)
....... .....+||+.|||||++.+. .|+.++|||||||++|||+||++||........ ..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 6544322 12345799999999988654 478899999999999999999888754322111 11
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
..+.... ..+..++... ......+++..+.++|.+||+.||++||||.||+++|+++.+..
T Consensus 239 ~~~~~~~----~~~~~rp~~p-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EEMRKVV----CEQKLRPNIP-----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHH----TTSCCCCCCC-----GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHH----hcccCCCCCC-----ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 1111100 0111111111 11223456778999999999999999999999999999987653
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-50 Score=430.28 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=198.8
Q ss_pred CCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 709 SENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
+..++||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++..........++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999865 68999999997542 3345778999999999999999999999865322222457999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeC-CCCcEEEecccccccccC
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~~ 862 (1002)
|||++|+|.+++.+.+ .+++..+..++.||+.||+||| +++ ||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998765 4899999999999999999999 776 99999999999998 479999999999986443
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. ....+||+.|||||++.+ +|+.++|||||||++|||+||+.||...... ..... .+..+..
T Consensus 185 ~~----~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~----~~~~~--------~i~~~~~ 247 (290)
T 3fpq_A 185 SF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYR--------RVTSGVK 247 (290)
T ss_dssp TS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHH--------HHTTTCC
T ss_pred Cc----cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH----HHHHH--------HHHcCCC
Confidence 22 234689999999998764 6999999999999999999999999653221 11111 1111111
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. ..+..+++++.+++.+||+.||++|||++|+++|-+
T Consensus 248 ~~------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~ 285 (290)
T 3fpq_A 248 PA------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp CG------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred CC------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 10 011223456889999999999999999999998743
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-49 Score=477.55 Aligned_cols=381 Identities=16% Similarity=0.215 Sum_probs=260.2
Q ss_pred CcccccccccccccccccceeecccCCCccc-cCCccccCCCccchhhccccccccccccccc--ccCCCCeeecCCCcc
Q 037042 232 LNKLVGVIPAEIFNMSTIQGVGLQNNSLSGS-LQSIPYVRLPNLEELYLWGNHFSGSIPNFIF--NASKLSRLELQKNSF 308 (1002)
Q Consensus 232 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l 308 (1002)
.|++++ +|..++++++|++|+|++|++++. +... + ..-+.+...+.+|..++ ++++|++|+|++|++
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~-~--------~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEA-W--------ENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSS-C--------SCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCcccccccccc-c--------cccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 577887 777788888888888887777762 0000 0 00011111222444444 444555555555554
Q ss_pred CCCCccccccccccchhcccccc-Ccc--chhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCC
Q 037042 309 SGFIPSTFGNLRNLKRLGLNNNH-LTS--LTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDC 385 (1002)
Q Consensus 309 ~~~~p~~~~~l~~L~~L~L~~N~-l~~--l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N 385 (1002)
.+.+|..|+++++|++|+|++|+ ++. +|..+..+..+..+++|++|+|++|+++.++....+..+ ++|+.|++++|
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l-~~L~~L~L~~N 340 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKM-KKLGMLECLYN 340 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTC-TTCCEEECCSC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccC-CCCCEEeCcCC
Confidence 44444445555555555555554 442 443332222223335555555555555533210122222 35666666666
Q ss_pred CCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCC-CCEEEccCCcccccCCccccCCc--cccEEEccCCcCCcc
Q 037042 386 NVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQK-LQVLYFPDNKLEGSIPDEVCRLA--KVYQLDLSNNKLSGS 462 (1002)
Q Consensus 386 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~ 462 (1002)
+++|.+| .|+.+++|++|+|++|+++ .+|..+.++++ |++|++++|+++ .+|..+..+. +|+.|+|++|++++.
T Consensus 341 ~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 341 QLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred cCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 6666677 7777888888888888888 67777888888 888888888888 6777776654 788888888888888
Q ss_pred CCcccc-------CCccCcccccccccccccCCccccccccCceeeccCCCCCCCCccccccc-------ccceeeeCCC
Q 037042 463 IPACFG-------DLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNL-------KVLVKIDFSM 528 (1002)
Q Consensus 463 ~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-------~~L~~L~Ls~ 528 (1002)
+|..|. .+++|+.|+|++|+++++.+..+..+++|++|+|++|+++...+..+..+ ++|+.|+|++
T Consensus 418 ~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~ 497 (636)
T 4eco_A 418 DGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRF 497 (636)
T ss_dssp TTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCS
T ss_pred chhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcC
Confidence 888777 77788888888888886655566678888888888888884333333333 3888999999
Q ss_pred CccCccCccccc--CCccccEEEccCeeecccCCcccccccccceecc------ccccccCCCcccccCCCccceeeCCC
Q 037042 529 NNFSGVIPNAIG--GIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNL------SNNNLSGSIPVSLEKLSYLKDLNLSF 600 (1002)
Q Consensus 529 N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1002)
|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|++|+|++
T Consensus 498 N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 575 (636)
T 4eco_A 498 NKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGS 575 (636)
T ss_dssp SCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCS
T ss_pred CcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCC
Confidence 9988 5677776 88899999999999987 8888888899999988 67889999999999999999999999
Q ss_pred CcCcccCCCCCCCCCCccccccCCCCCCCC
Q 037042 601 NKLEGEIPKGGSFGNFSAESFEGNKLLCGS 630 (1002)
Q Consensus 601 N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 630 (1002)
|++ +.+|.. ....+....+.+|+..|-.
T Consensus 576 N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 576 NDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp SCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred CcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 999 788876 3367777888899887743
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-50 Score=446.06 Aligned_cols=268 Identities=23% Similarity=0.387 Sum_probs=216.0
Q ss_pred HHHHHhhcCCCCCceeeccCcceEEEEEeCC------CcEEEEEEeecccc-hhHHHHHHHHHHHHhccC-CCcceeeeE
Q 037042 699 LELCQATDGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRH-RNIIKIISC 770 (1002)
Q Consensus 699 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~ 770 (1002)
.+.+...++|+..+.||+|+||+||+|++.. ++.||||++..... ...+.+.+|+++|++++| ||||+++++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 3333445789999999999999999998542 46799999976543 345679999999999965 899999999
Q ss_pred EecCchhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcc
Q 037042 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCD 835 (1002)
Q Consensus 771 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrD 835 (1002)
|...+. ..++|||||++|+|.++++..+ ..+++..+..++.|||+||+||| +++|||||
T Consensus 137 ~~~~~~---~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD 210 (353)
T 4ase_A 137 CTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 210 (353)
T ss_dssp ECCTTS---CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEecCC---EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence 865431 3579999999999999997532 34889999999999999999999 89999999
Q ss_pred CCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcc
Q 037042 836 LKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNE 914 (1002)
Q Consensus 836 lkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~ 914 (1002)
|||+|||+++++.+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998765554444556679999999999999999999999999999999998 9999976
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
...... +... +.++... ..++.++.++.++|.+||+.||++|||+.|+++||+++-+.
T Consensus 291 ~~~~~~-~~~~-----------i~~g~~~-------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 291 VKIDEE-FCRR-----------LKEGTRM-------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCCSHH-HHHH-----------HHHTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHH-HHHH-----------HHcCCCC-------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 432211 1111 1111110 11233567789999999999999999999999999987654
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-50 Score=449.19 Aligned_cols=252 Identities=22% Similarity=0.276 Sum_probs=209.8
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.|+..++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++...+ ..|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~----~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD----ELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT----EEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC----EEEEE
Confidence 46999999999999999999864 69999999998665555677899999999999999999999998876 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||||+||+|.+++... .+++.++..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 227 mEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp EECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred EeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 9999999999999754 3899999999999999999999 8999999999999999999999999999998775443
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +.... +.........
T Consensus 302 ~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-----~~~~~-----i~~~~~~~~~- 368 (423)
T 4fie_A 302 P--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----KAMKM-----IRDNLPPRLK- 368 (423)
T ss_dssp C--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH-----HHHSCCCCCS-
T ss_pred c--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHH-----HHcCCCCCCc-
Confidence 2 234568999999999999999999999999999999999999999753211 11110 1111111111
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....++..+.+++.+||..||++|||+.|+++|=+
T Consensus 369 -------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~ 403 (423)
T 4fie_A 369 -------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 403 (423)
T ss_dssp -------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred -------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHH
Confidence 01224567889999999999999999999999854
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-49 Score=422.92 Aligned_cols=248 Identities=22% Similarity=0.338 Sum_probs=192.7
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||++++.. ......+.+|++++++++|||||++++++...+ ..
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~----~~ 88 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD----EI 88 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----EE
Confidence 6899999999999999999985 479999999997542 234567899999999999999999999998876 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+ +|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+...
T Consensus 89 ~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 89 IMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 8999999 679999997655 5999999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ....+||+.|||||++.+..| +.++||||+||++|||+||+.||.... ....... +..+
T Consensus 164 ~~~~---~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~--------i~~~ 227 (275)
T 3hyh_A 164 DGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKN--------ISNG 227 (275)
T ss_dssp --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH--------HHHT
T ss_pred CCCc---cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHH--------HHcC
Confidence 4332 244689999999999988876 689999999999999999999997532 1222111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... +...+..+.+++.+||+.||++|||++|+++|=+
T Consensus 228 ~~~~--------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 228 VYTL--------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred CCCC--------CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcc
Confidence 1111 1123456889999999999999999999999865
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=429.67 Aligned_cols=250 Identities=23% Similarity=0.293 Sum_probs=198.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|++.+.||+|+||+||+|+.. +++.||||++++.. ......+.+|++++++++|||||++++++.+.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 99 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG---- 99 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----
Confidence 56999999999999999999752 47889999997542 222346788999999999999999999998876
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|||||+||+|.+++.+.+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 5689999999999999998765 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+... .+..
T Consensus 176 ~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~--------~i~~ 240 (304)
T 3ubd_A 176 SIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMT--------MILK 240 (304)
T ss_dssp -----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHH
T ss_pred ccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHH--------HHHc
Confidence 544322 22456899999999999999999999999999999999999999976322 11111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~L~ 986 (1002)
..... +..++..+.+++.+||++||++|||+ +|+++|=+
T Consensus 241 ~~~~~--------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~ 284 (304)
T 3ubd_A 241 AKLGM--------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284 (304)
T ss_dssp CCCCC--------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGG
T ss_pred CCCCC--------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcc
Confidence 11111 12245678899999999999999984 68887743
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=469.29 Aligned_cols=456 Identities=18% Similarity=0.221 Sum_probs=342.2
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCceEEc-ccccCCCCCccccccccccceeeecccccccc------------ccc
Q 037042 126 PFFESLNLSKNMFHGGIPSALSNCTYLRILRL-SYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA------------YDH 192 (1002)
Q Consensus 126 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------------~~~ 192 (1002)
..++.|+|++|.++|.+|++|++|++|++|+| ++|.++|..|..-... .++++...+... ...
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~----~~~l~~~~l~~lr~~~~~~~l~~~~~~ 398 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEEL----TPDMSEERKHRIRMHYKKMFLDYDQRL 398 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCC----CSSCCHHHHHHHHTHHHHHHTCCCGGG
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeeccccccccccccccccc----ccccchhHHHHHHHhhhhhhhccCcch
Confidence 56788888888888888888888888888888 8888877644321111 011111110000 000
Q ss_pred hhhHHhhhchhhcccCCcccCCCCccccCccccceeeccC--cccccccccccccccccceeecccCCCcc---------
Q 037042 193 GFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL--NKLVGVIPAEIFNMSTIQGVGLQNNSLSG--------- 261 (1002)
Q Consensus 193 ~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--------- 261 (1002)
.+...... .+..+. ...+-.......++.+.++. |++++ +|..+.++++|+.|+|++|++++
T Consensus 399 ~~s~l~~~----~l~~~~--~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~ 471 (876)
T 4ecn_A 399 NLSDLLQD----AINRNP--EMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWED 471 (876)
T ss_dssp GSCHHHHH----HHHTCT--TSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred hhhHHHHH----HhhhCc--cccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccc
Confidence 00000000 000000 01111123334555555554 88888 78889999999999999999987
Q ss_pred ---------ccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCc-cCC-CCcccccccc-------ccc
Q 037042 262 ---------SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNS-FSG-FIPSTFGNLR-------NLK 323 (1002)
Q Consensus 262 ---------~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~ 323 (1002)
.++.+.|..+++|++|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..|++++ +|+
T Consensus 472 ~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~ 551 (876)
T 4ecn_A 472 ANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQ 551 (876)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCC
T ss_pred cccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCcc
Confidence 3333335588999999999999988999999999999999999998 888 7888777776 999
Q ss_pred hhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCC-cc
Q 037042 324 RLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTN-LI 402 (1002)
Q Consensus 324 ~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~-L~ 402 (1002)
.|+|++|+++.+|.. ..+.++++|+.|+|++|.+..++ .+.. .++|+.|+|++|+++ .+|..+..+++ |+
T Consensus 552 ~L~Ls~N~L~~ip~~----~~l~~L~~L~~L~Ls~N~l~~lp---~~~~-L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~ 622 (876)
T 4ecn_A 552 IFYMGYNNLEEFPAS----ASLQKMVKLGLLDCVHNKVRHLE---AFGT-NVKLTDLKLDYNQIE-EIPEDFCAFTDQVE 622 (876)
T ss_dssp EEECCSSCCCBCCCH----HHHTTCTTCCEEECTTSCCCBCC---CCCT-TSEESEEECCSSCCS-CCCTTSCEECTTCC
T ss_pred EEEeeCCcCCccCCh----hhhhcCCCCCEEECCCCCcccch---hhcC-CCcceEEECcCCccc-cchHHHhhccccCC
Confidence 999999999987750 13678889999999999988443 3333 357999999999998 78888999998 99
Q ss_pred EEEccCCccCccCCccccCCCC--CCEEEccCCcccccCCccc---c--CCccccEEEccCCcCCccCCccccCCccCcc
Q 037042 403 GFYLGGNNLNGSIPITLGKLQK--LQVLYFPDNKLEGSIPDEV---C--RLAKVYQLDLSNNKLSGSIPACFGDLASLRN 475 (1002)
Q Consensus 403 ~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 475 (1002)
.|+|++|+++ .+|..+..++. |+.|+|++|++++.+|... . .+.+|+.|+|++|+++...+..+..+++|+.
T Consensus 623 ~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~ 701 (876)
T 4ecn_A 623 GLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPIST 701 (876)
T ss_dssp EEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSE
T ss_pred EEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCE
Confidence 9999999998 77888877754 9999999999988766433 2 3458999999999999544445568899999
Q ss_pred cccccccccccCCccccc-------cccCceeeccCCCCCCCCccccc--ccccceeeeCCCCccCccCcccccCCcccc
Q 037042 476 LSLASNELISVIPSTFWN-------LKDILYLNLSSNSLTGPLPLEIG--NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQ 546 (1002)
Q Consensus 476 L~L~~N~l~~~~~~~~~~-------l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 546 (1002)
|+|++|+|..+.+..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+
T Consensus 702 L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~ 779 (876)
T 4ecn_A 702 IILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLK 779 (876)
T ss_dssp EECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCC
T ss_pred EECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCC
Confidence 999999998654444443 338999999999999 5777776 89999999999999997 688899999999
Q ss_pred EEEccC------eeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccC
Q 037042 547 FLFLEY------NILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 547 ~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
.|+|++ |++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++...-
T Consensus 780 ~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 780 AFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISID 843 (876)
T ss_dssp EEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEE
T ss_pred EEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccC
Confidence 999976 888889999999999999999999999 68888775 68999999999987543
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=459.08 Aligned_cols=487 Identities=21% Similarity=0.196 Sum_probs=375.2
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
+++.|||++|+|++..|.+|.+|++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|...|+++++|++|+|
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeecc
Confidence 5889999999999877788999999999999999999777778999999999999999998 677777899999999999
Q ss_pred CCCcccc-cCCccccCCCCCceEEcccccCCCCCccccccccccc----eeeeccccccccccchhhHHhhhchhhcccC
Q 037042 134 SKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE----ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSH 208 (1002)
Q Consensus 134 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~ 208 (1002)
++|++++ .+|..++++++|++|+|++|+|++..|..|..+.+++ .++++.|.++.+.
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~------------------ 217 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQ------------------ 217 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEEC------------------
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccC------------------
Confidence 9999986 4688999999999999999999988888888887765 6888899887532
Q ss_pred CcccCCCCccccCccccceeeccCcccccc-cccccccccccceeecccCCCcc--cc---CCccccCCCccchhhcccc
Q 037042 209 NFSKCEIPNEIGNLRNLEVLALGLNKLVGV-IPAEIFNMSTIQGVGLQNNSLSG--SL---QSIPYVRLPNLEELYLWGN 282 (1002)
Q Consensus 209 n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~--~~---~~~~~~~l~~L~~L~Ls~N 282 (1002)
........++.|++.+|..... .+..+..+..++...+..+.... .+ ....+..+..+..+++..+
T Consensus 218 --------~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 218 --------PGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp --------TTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred --------cccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 2333334455666666654422 23344455555554443332211 11 1112223333444444333
Q ss_pred cccc---cccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCC
Q 037042 283 HFSG---SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359 (1002)
Q Consensus 283 ~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N 359 (1002)
.... ..+..+....+++.+++.+|.+.... .+....+|+.|++.+|.+..++. ..++.|+.++++.|
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~--------~~l~~L~~l~l~~n 359 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT--------LKLKSLKRLTFTSN 359 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC--------CBCTTCCEEEEESC
T ss_pred hhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc--------ccchhhhhcccccc
Confidence 3221 22334455667777777777776443 35556677777777777776542 34567777777777
Q ss_pred CCCCcccccccccccccccEEecCCCCCCC--CCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccc
Q 037042 360 SIDGILSRKSVGNLSHSLKIFDMSDCNVSG--SIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG 437 (1002)
Q Consensus 360 ~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 437 (1002)
.+....... -.++|+.+++++|.+.. ..+..+..+.+|+.|++..|.+.. .+..+..+++|+.++++.|....
T Consensus 360 ~~~~~~~~~----~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~ 434 (635)
T 4g8a_A 360 KGGNAFSEV----DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQ 434 (635)
T ss_dssp CSCCBCCCC----BCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEES
T ss_pred cCCCCcccc----cccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccc
Confidence 766543221 13467788888887753 345667778899999999998874 55678889999999999888776
Q ss_pred cCC-ccccCCccccEEEccCCcCCccCCccccCCccCcccccccccc-cccCCccccccccCceeeccCCCCCCCCcccc
Q 037042 438 SIP-DEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNEL-ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI 515 (1002)
Q Consensus 438 ~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 515 (1002)
..+ ..+..+.+++.++++.|.+.+..+..+..+++|+.|+|++|++ .+..|..|..+++|++|+|++|+|++..|..|
T Consensus 435 ~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 554 4577899999999999999999999999999999999999974 45678899999999999999999999889999
Q ss_pred cccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccc-cccceeccccccccCC
Q 037042 516 GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDL-MSLKSLNLSNNNLSGS 582 (1002)
Q Consensus 516 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~ 582 (1002)
.++++|++|+|++|+|+++.|..|.++++|+.|+|++|+|++.+|..|..+ ++|+.|+|++|+++..
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred cCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 999999999999999999999999999999999999999999999999988 6899999999999863
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=456.19 Aligned_cols=438 Identities=19% Similarity=0.194 Sum_probs=304.0
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|+|++|.+++..|..+.++++|++|+|++|++++..|..|+++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH---PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC---CCCCCSEEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc---ccCCccEEe
Confidence 57999999999999888889999999999999999999888999999999999999999999 78877 699999999
Q ss_pred CCCCcccc-cCCccccCCCCCceEEcccccCCCCCcccccccccc--ceeeeccccc--cccccchhhHHhhhchhhccc
Q 037042 133 LSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKL--EELYLSFNGL--QGAYDHGFLQIFVKNIFVQFS 207 (1002)
Q Consensus 133 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~~~~~~~~~~~~~~~~~~ 207 (1002)
|++|++++ .+|..|+++++|++|+|++|++++ ..|..+++| ++|+|++|.+ .+
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~------------------- 154 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK------------------- 154 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS-------------------
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc-------------------
Confidence 99999997 578999999999999999999986 467788888 9999999999 43
Q ss_pred CCcccCCCCccccCcc-ccceeeccCccccccccc-ccccccccceeecccCC-------CccccCCccccCCCccchhh
Q 037042 208 HNFSKCEIPNEIGNLR-NLEVLALGLNKLVGVIPA-EIFNMSTIQGVGLQNNS-------LSGSLQSIPYVRLPNLEELY 278 (1002)
Q Consensus 208 ~n~~~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~~l~~L~~L~ 278 (1002)
..|..+..+. +...+++++|++.+.++. .+.++++|+.|++++|. +.+.++ .+..+++|+.|+
T Consensus 155 ------~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~--~l~~l~~L~~L~ 226 (520)
T 2z7x_B 155 ------EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA--KLQTNPKLSNLT 226 (520)
T ss_dssp ------CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH--GGGGCTTCCEEE
T ss_pred ------cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh--hhccccchhhcc
Confidence 4566666655 345678888888776654 56678899999999987 555554 456788999999
Q ss_pred ccccccccccccccc---ccCCCCeeecCCCccCCCCcccc-----ccccccchhccccccCccchhhhhhhcccCCCCC
Q 037042 279 LWGNHFSGSIPNFIF---NASKLSRLELQKNSFSGFIPSTF-----GNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350 (1002)
Q Consensus 279 Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~ 350 (1002)
+++|.+++..+..+. ..++|++|++++|++++.+|..+ +++++|+.+++++|.+ .+|... +..+....+
T Consensus 227 l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~--~~~~~~~~~ 303 (520)
T 2z7x_B 227 LNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSY--IYEIFSNMN 303 (520)
T ss_dssp EEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHH--HHHHHHTCC
T ss_pred ccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhh--hhcccccCc
Confidence 999988764333222 24689999999999998889888 8888899999888888 665221 011111134
Q ss_pred CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEc
Q 037042 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 430 (1002)
|+.|++++|.+..+ . .+..+++|++|++++|++++.+|..++++++|++|+|
T Consensus 304 L~~L~l~~n~l~~~--------------------------~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 355 (520)
T 2z7x_B 304 IKNFTVSGTRMVHM--------------------------L--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLIL 355 (520)
T ss_dssp CSEEEEESSCCCCC--------------------------C--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEEC
T ss_pred eeEEEcCCCccccc--------------------------c--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEc
Confidence 55555555554322 1 1145556666666666666656666666666666666
Q ss_pred cCCcccc--cCCccccCCccccEEEccCCcCCccCCc-cccCCccCcccccccccccccCCccccccccCceeeccCCCC
Q 037042 431 PDNKLEG--SIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507 (1002)
Q Consensus 431 ~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 507 (1002)
++|++++ .+|..+..+++|++|+|++|++++.+|. .|..+++|+.|++++|++++..|..+.
T Consensus 356 ~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--------------- 420 (520)
T 2z7x_B 356 QMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--------------- 420 (520)
T ss_dssp CSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC---------------
T ss_pred cCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc---------------
Confidence 6666654 3344555555566666665555542332 344445555555555554443333322
Q ss_pred CCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCC
Q 037042 508 TGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGS 582 (1002)
Q Consensus 508 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 582 (1002)
++|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 421 -----------~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 421 -----------PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp -----------TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred -----------ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCccc
Confidence 34445555555554 3344444555555555555555532222255555555555555555543
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=460.61 Aligned_cols=462 Identities=20% Similarity=0.206 Sum_probs=338.3
Q ss_pred CCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcc
Q 037042 79 LQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLS 158 (1002)
Q Consensus 79 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 158 (1002)
.+++++++|+++ .+|..+. ++|++|+|++|+++ .+|...|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 33 ~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 33 ESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCC-CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCcc-ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 377777777777 4665553 56667777776666 3444444566666666666666666666666666666666666
Q ss_pred cccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccc
Q 037042 159 YNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV 238 (1002)
Q Consensus 159 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 238 (1002)
+|+|+ .+|.. .+++|++|+|++|++++. .+|..++++++|++|+|++|++++.
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l------------------------~~p~~~~~l~~L~~L~L~~n~l~~~ 161 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVL------------------------PVCKEFGNLTKLTFLGLSAAKFRQL 161 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBC------------------------CCCGGGGGCTTCCEEEEECSBCCTT
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCcccc------------------------CchHhhcccCcccEEecCCCccccC
Confidence 66666 45544 566666666666666532 2345566666666666666665531
Q ss_pred cccccccccccceeecccCCCccccCCccccCCCcc--chhhcccccc--cccccccccccC-CCCeeecCCCccCCCCc
Q 037042 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNL--EELYLWGNHF--SGSIPNFIFNAS-KLSRLELQKNSFSGFIP 313 (1002)
Q Consensus 239 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p 313 (1002)
.+ ..+++| ++|+|++|++ ++..|..+..+. +.-.+++++|.+.+.++
T Consensus 162 ---~~-------------------------~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~ 213 (562)
T 3a79_B 162 ---DL-------------------------LPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQV 213 (562)
T ss_dssp ---TT-------------------------GGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCC
T ss_pred ---ch-------------------------hhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhh
Confidence 22 223333 6677777776 666676666643 12256788888877554
Q ss_pred c-ccccccccchhccccccC--ccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccc-ccccccccEEecCCCCCCC
Q 037042 314 S-TFGNLRNLKRLGLNNNHL--TSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSV-GNLSHSLKIFDMSDCNVSG 389 (1002)
Q Consensus 314 ~-~~~~l~~L~~L~L~~N~l--~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~~~~L~~L~L~~N~l~~ 389 (1002)
. .+.++++|+.|++++|+. +.++. .+..+..+++|+.++++++.+.+....... .....+|++|++++|+++|
T Consensus 214 ~~~~~~l~~L~~L~l~~n~~~~~~l~~---~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 290 (562)
T 3a79_B 214 NMSVNALGHLQLSNIKLNDENCQRLMT---FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITE 290 (562)
T ss_dssp EEEESSEEEEEEEEEECCSTTHHHHHH---HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECS
T ss_pred hhcccccceEEEecccccccccchHHH---HHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeec
Confidence 4 567788899999998862 22222 224567788888888888877643211110 0112379999999999999
Q ss_pred CCCccc-----CCCCCccEEEccCCccCccCC-ccccCC---CCCCEEEccCCcccccCCccccCCccccEEEccCCcCC
Q 037042 390 SIPEEI-----GNLTNLIGFYLGGNNLNGSIP-ITLGKL---QKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 390 ~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
.+|..+ ..++.|+.+++..|.+ .+| ..+..+ .+|+.|++++|.+.... ....+++|++|+|++|+++
T Consensus 291 ~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~ 366 (562)
T 3a79_B 291 RIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFT 366 (562)
T ss_dssp CCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC
T ss_pred cccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccc
Confidence 999888 8888888888888888 344 333332 67999999999986432 1267899999999999999
Q ss_pred ccCCccccCCccCcccccccccccccC--CccccccccCceeeccCCCCCCCCc-ccccccccceeeeCCCCccCccCcc
Q 037042 461 GSIPACFGDLASLRNLSLASNELISVI--PSTFWNLKDILYLNLSSNSLTGPLP-LEIGNLKVLVKIDFSMNNFSGVIPN 537 (1002)
Q Consensus 461 ~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~ 537 (1002)
+..|..|+.+++|+.|+|++|+++++. |..|.++++|++|++++|++++.+| ..+..+++|+.|++++|++++.+|.
T Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 367 DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGS
T ss_pred cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhh
Confidence 999999999999999999999999843 5679999999999999999998444 4689999999999999999988777
Q ss_pred cccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCccc-ccCCCccceeeCCCCcCcccCCCC
Q 037042 538 AIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVS-LEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 538 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
.+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +|.. +..+++|+.|+|++|+++|.+|..
T Consensus 447 ~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 447 CLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp SCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred hhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 665 79999999999999 677777799999999999999995 5555 999999999999999999987753
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=417.74 Aligned_cols=264 Identities=22% Similarity=0.357 Sum_probs=193.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-----
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA----- 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----- 778 (1002)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++|++++|||||++++++...+...
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35889999999999999999864 79999999997543 334577899999999999999999999987654221
Q ss_pred ---HHHHHhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 779 ---LFKALALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 779 ---~~~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
.+.++|||||++|+|.+++..... ..++..++.++.||++||+||| +++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 124699999999999999986543 4566778899999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCcee----------eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHH
Q 037042 854 FGITKLLTREDQFV----------TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLK 923 (1002)
Q Consensus 854 fGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~ 923 (1002)
||+|+.+....... ..+..+||+.|||||++.+..|+.++||||+||++|||++ ||...... .
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~----~ 234 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER----V 234 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH----H
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH----H
Confidence 99998775433211 1234579999999999999999999999999999999996 77542111 0
Q ss_pred HHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 924 HWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 924 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
. .+..+.+... +. ......+...+++.+||+.||++|||+.|+++|-+ +++.+++.
T Consensus 235 ~--------~~~~~~~~~~--p~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~-~~~~~~p~ 290 (299)
T 4g31_A 235 R--------TLTDVRNLKF--PP-----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAV-FEDLDFPG 290 (299)
T ss_dssp H--------HHHHHHTTCC--CH-----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG-GCCC----
T ss_pred H--------HHHHHhcCCC--CC-----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHh-hCCCCCCC
Confidence 0 0111111111 10 11223455678999999999999999999999744 45555443
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-46 Score=444.72 Aligned_cols=459 Identities=23% Similarity=0.211 Sum_probs=312.2
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
+.+|++++++++ +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++ ++...|.++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-LDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCE-ECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCc-CCHHHhCCCCCCCEEECCC
Confidence 799999999994 888775 899999999999998888999999999999999999995 4445568899999999999
Q ss_pred CcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 214 (1002)
|+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++.
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~------------------------- 161 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL------------------------- 161 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-------------------------
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC-------------------------
Confidence 9999 67766 89999999999999986 4578999999999999999999741
Q ss_pred CCccccCccc--cceeeccCccc--cccccccccccc-ccceeecccCCCccccCCccccCCCccchhhccccc-----c
Q 037042 215 IPNEIGNLRN--LEVLALGLNKL--VGVIPAEIFNMS-TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNH-----F 284 (1002)
Q Consensus 215 ~p~~l~~l~~--L~~L~L~~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~-----l 284 (1002)
.+..+++ |++|++++|++ ++..|..+..+. +.-.+++++|.+.+.+....+..+++|+.|++++|+ +
T Consensus 162 ---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l 238 (562)
T 3a79_B 162 ---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRL 238 (562)
T ss_dssp ---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHH
T ss_pred ---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchH
Confidence 2333444 49999999999 888888888765 223568888888877777777788888888888885 2
Q ss_pred cccccccccccCCCCeeecCCCccCCCCccc---cccccccchhccccccCc-cchhhhhhhcccCCCCCCcEEeCCCCC
Q 037042 285 SGSIPNFIFNASKLSRLELQKNSFSGFIPST---FGNLRNLKRLGLNNNHLT-SLTLELSFLSSLSNCKYLEFIDLSSNS 360 (1002)
Q Consensus 285 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~l~~l~~L~~L~Ls~N~ 360 (1002)
.+. ...+..+++|+.|+|+++.+++..... ....++|++|++++|+++ .+|..+. ......++.|+.++++.|.
T Consensus 239 ~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~-~~~~~~L~~L~~~~~~~~~ 316 (562)
T 3a79_B 239 MTF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEF-TYSETALKSLMIEHVKNQV 316 (562)
T ss_dssp HHH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCC-CCCSCSCCEEEEEEEEECC
T ss_pred HHH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhh-hcccccchheehhhcccce
Confidence 222 234566677777777776665321111 112236667777777666 4443210 0001344444444444444
Q ss_pred CCCcccccccccccccccEEecCCCCCCCCCC-cccCC---CCCccEEEccCCccCccCCccccCCCCCCEEEccCCccc
Q 037042 361 IDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP-EEIGN---LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLE 436 (1002)
Q Consensus 361 l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 436 (1002)
+ .+| ..+.. ..+|+.|++++|.+.... ....+++|++|++++|+++
T Consensus 317 ~----------------------------~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~ 366 (562)
T 3a79_B 317 F----------------------------LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFT 366 (562)
T ss_dssp C----------------------------SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC
T ss_pred e----------------------------ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccc
Confidence 3 112 11111 134555555555553211 1145556666666666666
Q ss_pred ccCCccccCCccccEEEccCCcCCcc--CCccccCCccCcccccccccccc-cCCccccccccCceeeccCCCCCCCCcc
Q 037042 437 GSIPDEVCRLAKVYQLDLSNNKLSGS--IPACFGDLASLRNLSLASNELIS-VIPSTFWNLKDILYLNLSSNSLTGPLPL 513 (1002)
Q Consensus 437 ~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 513 (1002)
+.+|..+..+++|+.|+|++|++++. +|..|..+++|+.|++++|++.+ +.+..|..+++|++|++++|++++..|.
T Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 367 DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGS
T ss_pred cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhh
Confidence 55566666666666666666666542 23456666666666666666665 3334466666777777777776655544
Q ss_pred cccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCc
Q 037042 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIP 584 (1002)
Q Consensus 514 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 584 (1002)
.+. ++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 447 ~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 447 CLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred hhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 443 56777777777777 445555577777777777777774333337777777777888777776544
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-45 Score=401.42 Aligned_cols=296 Identities=30% Similarity=0.465 Sum_probs=272.0
Q ss_pred CCChhHHHHHHHHHHhccCCCCCccccCCCCCCCCCc--ccccEeeCCC--CcEEEEEeCCCCCcc--ccCcccCCCCCC
Q 037042 6 SNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCN--WTGVTCDVHS--HRVTALNISHLSLSG--TIPSRLGNLSSL 79 (1002)
Q Consensus 6 ~~~~~~~~~l~~~k~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~L~l~~~~l~~--~~p~~l~~l~~L 79 (1002)
.|.++|++||++||+++. ||. .+ ++|..+.+||. |.||+|+..+ ++|+.|+|++|+++| .+|+.++++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l-~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TL-SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GG-TTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cc-cCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 589999999999999994 676 44 58988889998 9999999765 899999999999999 999999999999
Q ss_pred CEEEccc-CCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcc
Q 037042 80 QSLFLHS-NQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLS 158 (1002)
Q Consensus 80 ~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 158 (1002)
++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..+ .++++|++|+|++|.+++.+|..|+++++|++|+|+
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL-SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGG-GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHH-hCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 9999995 99999999999999999999999999999998876 679999999999999999999999999999999999
Q ss_pred cccCCCCCcccccccc-ccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccc
Q 037042 159 YNDFAGGIPKEIGNLT-KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237 (1002)
Q Consensus 159 ~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1002)
+|++++.+|..|.+++ +|++|+|++|++++ .+|..++.++ |++|+|++|++++
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~-------------------------~~~~~~~~l~-L~~L~Ls~N~l~~ 211 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTG-------------------------KIPPTFANLN-LAFVDLSRNMLEG 211 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEE-------------------------ECCGGGGGCC-CSEEECCSSEEEE
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeec-------------------------cCChHHhCCc-ccEEECcCCcccC
Confidence 9999999999999998 99999999999986 5778888887 9999999999999
Q ss_pred ccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccc
Q 037042 238 VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFG 317 (1002)
Q Consensus 238 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 317 (1002)
.+|..+..+++|+.|+|++|++++.++. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. +
T Consensus 212 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~ 288 (313)
T 1ogq_A 212 DASVLFGSDKNTQKIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-G 288 (313)
T ss_dssp CCGGGCCTTSCCSEEECCSSEECCBGGG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-T
T ss_pred cCCHHHhcCCCCCEEECCCCceeeecCc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-c
Confidence 9999999999999999999999876665 567889999999999999899999999999999999999999888876 8
Q ss_pred cccccchhcccccc-Ccc
Q 037042 318 NLRNLKRLGLNNNH-LTS 334 (1002)
Q Consensus 318 ~l~~L~~L~L~~N~-l~~ 334 (1002)
.+++|+.|++++|+ +..
T Consensus 289 ~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp TGGGSCGGGTCSSSEEES
T ss_pred cccccChHHhcCCCCccC
Confidence 89999999999987 443
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=414.73 Aligned_cols=275 Identities=21% Similarity=0.208 Sum_probs=204.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~ 779 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|+++|++++|||||++++++..... ...
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999864 79999999997543 2345678899999999999999999998865321 112
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..|+|||||+ |+|.+++...+ .+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 4579999996 68999997755 5999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCc--eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh--h
Q 037042 860 LTREDQ--FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS--I 934 (1002)
Q Consensus 860 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~ 934 (1002)
+..... .......+||+.|||||++.+. .|+.++||||+||++|||++|++||...... ..+........... .
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHH
Confidence 644321 1223456899999999987775 5699999999999999999999999763221 11111111100000 0
Q ss_pred hh-c--------ccCccC-ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 MK-I--------VDGSLL-SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ~~-i--------~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. + ...... ....... ........+.+++.+||.+||++|||+.|+++|=+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 347 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWET-VYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHH-HSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHH-hCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHh
Confidence 00 0 000000 0000000 01123467889999999999999999999999844
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=415.13 Aligned_cols=385 Identities=20% Similarity=0.226 Sum_probs=274.8
Q ss_pred CCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccc
Q 037042 61 SHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHG 140 (1002)
Q Consensus 61 ~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~ 140 (1002)
++++++ .+|. +. ++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+|...|.++++|++|+|++|++++
T Consensus 18 ~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~ 93 (455)
T 3v47_A 18 INRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ 93 (455)
T ss_dssp CSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCE
T ss_pred CCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCc
Confidence 344555 5666 32 7899999999999988899999999999999999999888988888999999999999999998
Q ss_pred cCCccccCCCCCceEEcccccCCCCCccc--cccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCcc
Q 037042 141 GIPSALSNCTYLRILRLSYNDFAGGIPKE--IGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE 218 (1002)
Q Consensus 141 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~ 218 (1002)
..|..|+++++|++|+|++|++++.+|.. |.++++|++|+|++|++++ ..|..
T Consensus 94 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------------~~~~~ 148 (455)
T 3v47_A 94 LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKK-------------------------IQPAS 148 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCS-------------------------CCCCG
T ss_pred cChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCc-------------------------cCccc
Confidence 88999999999999999999999766655 9999999999999999985 23554
Q ss_pred -ccCccccceeeccCcccccccccccccc--cccceeecccCCCccccCCccccCCCccchhhccccccccccccccccc
Q 037042 219 -IGNLRNLEVLALGLNKLVGVIPAEIFNM--STIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295 (1002)
Q Consensus 219 -l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 295 (1002)
++++++|++|++++|++++..|..+..+ .+|+.|++++|.+.+..+. .+ .......+..+
T Consensus 149 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~-~~----------------~~~~~~~~~~~ 211 (455)
T 3v47_A 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEY-WL----------------GWEKCGNPFKN 211 (455)
T ss_dssp GGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTT-CT----------------THHHHCCTTTT
T ss_pred ccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchh-hc----------------ccccccccccc
Confidence 7889999999999999998888887765 4666666666666522111 00 00001112344
Q ss_pred CCCCeeecCCCccCCCCccccccc---cccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccc
Q 037042 296 SKLSRLELQKNSFSGFIPSTFGNL---RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGN 372 (1002)
Q Consensus 296 ~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 372 (1002)
++|++|+|++|++++..|..|..+ ++|+.|++++|.+....
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~------------------------------------ 255 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS------------------------------------ 255 (455)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC------------------------------------
T ss_pred ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc------------------------------------
Confidence 556666666666665555555443 44445555444433211
Q ss_pred ccccccEEecCCCCCCCCCCcccCCC--CCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCcccc
Q 037042 373 LSHSLKIFDMSDCNVSGSIPEEIGNL--TNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVY 450 (1002)
Q Consensus 373 ~~~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 450 (1002)
+..+.+.+..+..+..+ ++|+.|++++|++++..|..|..+++|++|+|++|++++..|..|..+++|+
T Consensus 256 ---------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 326 (455)
T 3v47_A 256 ---------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLL 326 (455)
T ss_dssp ---------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ---------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCC
Confidence 11111222222222222 4667777777777766677777777777777777777766666777777777
Q ss_pred EEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCc
Q 037042 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNN 530 (1002)
Q Consensus 451 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 530 (1002)
+|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++++|++|++++|++++..+..+..+++|+.|++++|.
T Consensus 327 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 406 (455)
T 3v47_A 327 KLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 406 (455)
T ss_dssp EEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCC
Confidence 77777777776667777777777777777777777777777777777777777777776666667777777777777777
Q ss_pred cCccCc
Q 037042 531 FSGVIP 536 (1002)
Q Consensus 531 l~~~~p 536 (1002)
+++..|
T Consensus 407 l~~~~~ 412 (455)
T 3v47_A 407 WDCSCP 412 (455)
T ss_dssp BCCCTT
T ss_pred cccCCC
Confidence 776655
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=407.36 Aligned_cols=271 Identities=20% Similarity=0.264 Sum_probs=202.0
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
...++|++.+.||+|+||+||+|+.+ +++.||||++.+.. ....+.+|+++++.+ +|||||++++++...+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~-- 93 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND-- 93 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC--
Confidence 34578999999999999999999743 47889999987643 345678899999998 6999999999998776
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEecccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFGI 856 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGl 856 (1002)
..++||||+++|+|.+++. .+++.+++.++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+
T Consensus 94 --~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 94 --HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp --EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred --EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 6689999999999999984 3889999999999999999999 9999999999999999876 8999999999
Q ss_pred cccccCCCc--------------------------eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCC
Q 037042 857 TKLLTREDQ--------------------------FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGK 909 (1002)
Q Consensus 857 a~~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~ 909 (1002)
|+....... ....+..+||+.|||||++.+. .|+.++||||+||++|||++|+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 986543211 0112345799999999988765 5899999999999999999999
Q ss_pred CCCcccccccccHHHHHHHHHhhh---hhh-----cc-cCccCChhh-------------------------hHHHhHHH
Q 037042 910 KPTNEIFNEGMTLKHWVNDWLLIS---IMK-----IV-DGSLLSRED-------------------------IQFVAKEQ 955 (1002)
Q Consensus 910 ~P~~~~~~~~~~~~~~~~~~~~~~---~~~-----i~-~~~~~~~~~-------------------------~~~~~~~~ 955 (1002)
.||.....+...+........... ..+ +. ......... ........
T Consensus 245 ~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 324 (361)
T 4f9c_A 245 YPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNE 324 (361)
T ss_dssp SSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTT
T ss_pred CCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccccccccc
Confidence 999764433222222221110000 000 00 000000000 00001112
Q ss_pred HHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 956 CMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 956 ~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.++++.+++.+||++||++|||++|+++|=+
T Consensus 325 is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~ 355 (361)
T 4f9c_A 325 VPDEAYDLLDKLLDLNPASRITAEEALLHPF 355 (361)
T ss_dssp CCHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred CCHHHHHHHHHHCcCChhHCcCHHHHhcCcc
Confidence 3467889999999999999999999998843
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=410.38 Aligned_cols=401 Identities=27% Similarity=0.340 Sum_probs=261.1
Q ss_pred cCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceee
Q 037042 101 HTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELY 180 (1002)
Q Consensus 101 ~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 180 (1002)
+.|++|++++|.+ |.+|.++ +++++|++|++++|.++|.+|.+++++++|+.++++.|.. .+|++|+
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i-~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~ 77 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEA-ENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELE 77 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEE
T ss_pred ccchhhhcccCch-hhCChhH-hcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEE
Confidence 4455555555555 4555443 3455555555555555555555555554444443333321 2347777
Q ss_pred eccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCc
Q 037042 181 LSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260 (1002)
Q Consensus 181 Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 260 (1002)
+++|++++ +|.. .++|++|++++|++++ +|.. +++|+.|++++|+++
T Consensus 78 l~~~~l~~--------------------------lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~ 124 (454)
T 1jl5_A 78 LNNLGLSS--------------------------LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK 124 (454)
T ss_dssp CTTSCCSC--------------------------CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS
T ss_pred ecCCcccc--------------------------CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC
Confidence 77777764 3331 2578888888888887 5543 377888888888887
Q ss_pred cccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhh
Q 037042 261 GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340 (1002)
Q Consensus 261 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~ 340 (1002)
+ ++.. .++|++|+|++|++++ +| .+.++++|++|++++|++++ +|..+ .+|++|++++|+++.+|
T Consensus 125 ~-l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~---- 189 (454)
T 1jl5_A 125 A-LSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP---- 189 (454)
T ss_dssp C-CCSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC----
T ss_pred c-ccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc----
Confidence 4 3222 2689999999999986 66 58889999999999999986 45443 58999999999998875
Q ss_pred hhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCcccc
Q 037042 341 FLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLG 420 (1002)
Q Consensus 341 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 420 (1002)
.+.++++|++|++++|+++++.. .+.+|+.|++++|+++ .+| .++.+++|++|++++|++++ +|..
T Consensus 190 ---~~~~l~~L~~L~l~~N~l~~l~~------~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~-- 255 (454)
T 1jl5_A 190 ---ELQNLPFLTAIYADNNSLKKLPD------LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL-- 255 (454)
T ss_dssp ---CCTTCTTCCEEECCSSCCSSCCC------CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC--
T ss_pred ---cccCCCCCCEEECCCCcCCcCCC------CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc--
Confidence 27889999999999999987532 2358999999999998 667 48999999999999999986 4543
Q ss_pred CCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCcccccc-ccCce
Q 037042 421 KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNL-KDILY 499 (1002)
Q Consensus 421 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~ 499 (1002)
+++|+.|++++|++++ +|.. .++|+.|++++|++++. |.. .++|+.|++++|+++++. .+ ++|++
T Consensus 256 -~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~-----~~~~~L~~ 321 (454)
T 1jl5_A 256 -PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLC-----DLPPSLEE 321 (454)
T ss_dssp -CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEEC-----CCCTTCCE
T ss_pred -ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCccc-----CCcCcCCE
Confidence 4789999999999996 5554 37899999999999873 221 268999999999998742 23 58999
Q ss_pred eeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecc--cCCcccccccccceeccccc
Q 037042 500 LNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG--SIPDSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 500 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N 577 (1002)
|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|+.|+|++|++++ .+|.+++.+ +.|
T Consensus 322 L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n 385 (454)
T 1jl5_A 322 LNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMN 385 (454)
T ss_dssp EECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECC
T ss_pred EECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhc
Confidence 9999999997 5544 5789999999999985 455 47899999999999998 677766543 346
Q ss_pred cccCCCcccccCCCccceeeCCCCcCcc--cCCC
Q 037042 578 NLSGSIPVSLEKLSYLKDLNLSFNKLEG--EIPK 609 (1002)
Q Consensus 578 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~ 609 (1002)
++.+.+|.. +++|+.|++++|++++ .+|.
T Consensus 386 ~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 386 SHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp C---------------------------------
T ss_pred ccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 667777763 4678888888888887 6664
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=408.34 Aligned_cols=419 Identities=23% Similarity=0.280 Sum_probs=214.6
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|++++|.+ |.+|+++++|++|++|+|++|.++|.+|.+++++.+|+.+++..|.. .++++|+
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~------------~~l~~L~ 77 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD------------RQAHELE 77 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH------------HTCSEEE
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc------------cCCCEEE
Confidence 3567777777777 67777777777777777777777777777777777765555555432 2457788
Q ss_pred CCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCccc
Q 037042 133 LSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212 (1002)
Q Consensus 133 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 212 (1002)
+++|.+++ +|.. .++|++|+|++|++++ +|.. +++|++|++++|++++.
T Consensus 78 l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l----------------------- 126 (454)
T 1jl5_A 78 LNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL----------------------- 126 (454)
T ss_dssp CTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-----------------------
T ss_pred ecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-----------------------
Confidence 88888774 4432 3577888888888875 6643 36778888888877642
Q ss_pred CCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccc
Q 037042 213 CEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFI 292 (1002)
Q Consensus 213 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 292 (1002)
|.. .++|++|++++|++++ +| .+.++++|++|++++|++++ ++.. .++|++|++++|++++ +| .+
T Consensus 127 ---~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~ 191 (454)
T 1jl5_A 127 ---SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-EL 191 (454)
T ss_dssp ---CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CC
T ss_pred ---cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cc
Confidence 211 1577788888888876 55 47777777777777777764 3322 2477777787777775 45 47
Q ss_pred cccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccc
Q 037042 293 FNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGN 372 (1002)
Q Consensus 293 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 372 (1002)
.++++|++|++++|+++++ |... ++|++|++++|+++.+|. +..+++|++|++++|+++++..
T Consensus 192 ~~l~~L~~L~l~~N~l~~l-~~~~---~~L~~L~l~~n~l~~lp~-------~~~l~~L~~L~l~~N~l~~l~~------ 254 (454)
T 1jl5_A 192 QNLPFLTAIYADNNSLKKL-PDLP---LSLESIVAGNNILEELPE-------LQNLPFLTTIYADNNLLKTLPD------ 254 (454)
T ss_dssp TTCTTCCEEECCSSCCSSC-CCCC---TTCCEEECCSSCCSSCCC-------CTTCTTCCEEECCSSCCSSCCS------
T ss_pred cCCCCCCEEECCCCcCCcC-CCCc---CcccEEECcCCcCCcccc-------cCCCCCCCEEECCCCcCCcccc------
Confidence 7777888888888877753 3322 477777888887776652 5677777777777777765421
Q ss_pred ccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEE
Q 037042 373 LSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQL 452 (1002)
Q Consensus 373 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 452 (1002)
...+|+.|++++|++++ +|.. .++|+.|++++|++++. |.. .++|+.|
T Consensus 255 ~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-------------------------~~~---~~~L~~L 302 (454)
T 1jl5_A 255 LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-------------------------SEL---PPNLYYL 302 (454)
T ss_dssp CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-------------------------SCC---CTTCCEE
T ss_pred cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-------------------------cCc---CCcCCEE
Confidence 12345555555555553 2322 13444555555544431 110 1345555
Q ss_pred EccCCcCCccCCccccCC-ccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCcc
Q 037042 453 DLSNNKLSGSIPACFGDL-ASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531 (1002)
Q Consensus 453 ~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 531 (1002)
++++|++++. + .+ ++|+.|++++|++++ +|.. +++|++|++++|++++ +|. .+++|+.|++++|++
T Consensus 303 ~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l 369 (454)
T 1jl5_A 303 NASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPL 369 (454)
T ss_dssp ECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred ECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCC
Confidence 5555555431 1 12 355566666666555 2322 3566777777777764 444 356777777777777
Q ss_pred Cc--cCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccC--CCcccccCCCccceeeCCCCcCcccC
Q 037042 532 SG--VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSG--SIPVSLEKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 532 ~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
++ .+|..++. |+.|.+.+.+|.. +++|+.|++++|++++ .+|. +|+.|.+.+|.+.+.+
T Consensus 370 ~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~ 432 (454)
T 1jl5_A 370 REFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPY 432 (454)
T ss_dssp SSCCCCCTTCCE--------EECCC-------------------------------------------------------
T ss_pred CcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCcc
Confidence 76 45555442 3346666666653 4678888888888886 5554 3556677888888776
Q ss_pred CC
Q 037042 608 PK 609 (1002)
Q Consensus 608 p~ 609 (1002)
|.
T Consensus 433 ~~ 434 (454)
T 1jl5_A 433 EF 434 (454)
T ss_dssp --
T ss_pred cc
Confidence 64
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=425.38 Aligned_cols=255 Identities=18% Similarity=0.241 Sum_probs=212.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||+|++........+.+.+|+++|+.++|||||++++++.... ..++
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN----EMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS----EEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC----EEEE
Confidence 367999999999999999999864 79999999998766556678899999999999999999999998876 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC--CcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN--MVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~--~~~kl~DfGla~~~~ 861 (1002)
|||||+||+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 99999999999999776667999999999999999999999 8999999999999999854 899999999999886
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
..... ...+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +.. ..+....
T Consensus 309 ~~~~~---~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-----~~~--------~~i~~~~ 372 (573)
T 3uto_A 309 PKQSV---KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-----ETL--------RNVKSCD 372 (573)
T ss_dssp TTSEE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHH--------HHHHTTC
T ss_pred CCCce---eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHH--------HHHHhCC
Confidence 65432 3457999999999999999999999999999999999999999764221 111 1111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... ....++..+.+++.+||+.||.+|||+.|+++|=+
T Consensus 373 ~~~~~~----~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw 413 (573)
T 3uto_A 373 WNMDDS----AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413 (573)
T ss_dssp CCCCSG----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred CCCCcc----cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence 111100 11224567889999999999999999999999854
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=407.35 Aligned_cols=378 Identities=19% Similarity=0.251 Sum_probs=290.1
Q ss_pred CCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccccccccccc
Q 037042 214 EIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293 (1002)
Q Consensus 214 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 293 (1002)
.+|. +. ++|++|+|++|++++..|..|.++++|++|+|++|.+.+.++...|..+++|++|+|++|++++..|..|.
T Consensus 24 ~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 100 (455)
T 3v47_A 24 QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFN 100 (455)
T ss_dssp SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTT
T ss_pred cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhcc
Confidence 4665 22 78999999999999888999999999999999999988777777788888888888888888888888888
Q ss_pred ccCCCCeeecCCCccCCCCccc--cccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccc
Q 037042 294 NASKLSRLELQKNSFSGFIPST--FGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371 (1002)
Q Consensus 294 ~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (1002)
++++|++|+|++|++++..|.. |+++++|++|+|++|+++.+... ..+.++++|++|++++|.+.++.+.....
T Consensus 101 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 176 (455)
T 3v47_A 101 GLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA----SFFLNMRRFHVLDLTFNKVKSICEEDLLN 176 (455)
T ss_dssp TCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC----GGGGGCTTCCEEECTTCCBSCCCTTTSGG
T ss_pred CcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc----cccCCCCcccEEeCCCCcccccChhhhhc
Confidence 8888888888888888755544 88888888888888888876322 11567777888888888777654432221
Q ss_pred cccccccEEecCCCCCCCCCCccc--------CCCCCccEEEccCCccCccCCccccCC---CCCCEEEccCCcccccCC
Q 037042 372 NLSHSLKIFDMSDCNVSGSIPEEI--------GNLTNLIGFYLGGNNLNGSIPITLGKL---QKLQVLYFPDNKLEGSIP 440 (1002)
Q Consensus 372 ~~~~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p 440 (1002)
-...+|+.|++++|.+.+..+..+ ..+++|++|++++|++++..|..+... ++|+.|++++|.+.+..
T Consensus 177 l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~- 255 (455)
T 3v47_A 177 FQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS- 255 (455)
T ss_dssp GTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC-
T ss_pred cccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc-
Confidence 112356666666666665444332 234555555555555555555444332 45555555555443221
Q ss_pred ccccCCccccEEEccCCcCCccCCccccCC--ccCcccccccccccccCCccccccccCceeeccCCCCCCCCccccccc
Q 037042 441 DEVCRLAKVYQLDLSNNKLSGSIPACFGDL--ASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNL 518 (1002)
Q Consensus 441 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 518 (1002)
+..+.+.+..+..+..+ ++|+.|++++|++.+..|..|.++++|++|++++|++++..|..|.++
T Consensus 256 -------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 322 (455)
T 3v47_A 256 -------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGL 322 (455)
T ss_dssp -------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred -------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCc
Confidence 11222232333334333 689999999999999999999999999999999999998888899999
Q ss_pred ccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeC
Q 037042 519 KVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNL 598 (1002)
Q Consensus 519 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 598 (1002)
++|+.|+|++|.+++..|..|+++++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+++|+.|+|
T Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 402 (455)
T 3v47_A 323 THLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWL 402 (455)
T ss_dssp TTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEc
Confidence 99999999999999999999999999999999999999988999999999999999999999877778899999999999
Q ss_pred CCCcCcccCCCCCC
Q 037042 599 SFNKLEGEIPKGGS 612 (1002)
Q Consensus 599 s~N~l~~~~p~~~~ 612 (1002)
++|+++|.+|....
T Consensus 403 ~~N~l~~~~~~~~~ 416 (455)
T 3v47_A 403 HTNPWDCSCPRIDY 416 (455)
T ss_dssp CSSCBCCCTTTTHH
T ss_pred cCCCcccCCCcchH
Confidence 99999999996543
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=415.40 Aligned_cols=252 Identities=20% Similarity=0.258 Sum_probs=202.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHH---HHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDV---ECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|++.++||+|+||+||+|+.. +|+.||||++++.. ......+.+ ++.+++.++|||||++++++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 367999999999999999999855 69999999997532 112233333 456677789999999999998877
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..|+|||||+||+|.+++...+ .+++..++.++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|
T Consensus 266 --~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 266 --KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred --EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEeccccee
Confidence 6789999999999999998765 4899999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
+.+.... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||....... ...... .
T Consensus 340 ~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~--------~ 405 (689)
T 3v5w_A 340 CDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDR--------M 405 (689)
T ss_dssp EECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHH--------H
T ss_pred eecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHH--------h
Confidence 8775432 235689999999999864 579999999999999999999999997643221 111111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRLL 986 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L~ 986 (1002)
+....... +...+..+.+++.+||+.||.+|++ ++||.+|-+
T Consensus 406 i~~~~~~~--------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hpf 452 (689)
T 3v5w_A 406 TLTMAVEL--------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452 (689)
T ss_dssp HHHCCCCC--------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGG
T ss_pred hcCCCCCC--------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCcc
Confidence 11111111 1123466889999999999999998 799998744
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=386.19 Aligned_cols=281 Identities=31% Similarity=0.514 Sum_probs=230.0
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
+.++...+++|+..+.||+|+||+||+|+..+|+.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 108 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN-- 108 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT--
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--
Confidence 334445678999999999999999999998889999999988766666788999999999999999999999997765
Q ss_pred hHHHHHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
..++||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+||
T Consensus 109 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 109 --EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp --CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred --eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeec
Confidence 5679999999999999997654 25899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccc-cccHHHHHHHHHhh-
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE-GMTLKHWVNDWLLI- 932 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~-~~~~~~~~~~~~~~- 932 (1002)
|+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......|.......
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 9998755433322334456899999999988889999999999999999999999999765443 23344444332222
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.+..+.++..... .+..++..+.+++.+||+.+|++|||+.|++++|+.+...
T Consensus 264 ~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 264 QLEQIVDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCCSSSSSSCTTC------SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cHHHhcChhhccc------cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 2334444332211 2345678899999999999999999999999999988654
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-43 Score=387.57 Aligned_cols=280 Identities=23% Similarity=0.269 Sum_probs=214.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..++||+|+||+||+|+.. ++.||||++.... ......++|+.++++++||||+++++++..........++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467999999999999999999876 7999999997543 33455667999999999999999999998755222234799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC----------CcEEccCCCCCeeeCCCCcEEEecc
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST----------PVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~----------~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
|||+++|+|.+++.... +++..+..++.|+++||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999997653 899999999999999999999 77 9999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccH-HHHHHH
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSE-----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL-KHWVND 928 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~-~~~~~~ 928 (1002)
|+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... ......
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99987765544333445679999999998876 356788999999999999999999997654332211 110000
Q ss_pred H-HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 929 W-LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 929 ~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. ....+.....................++..+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 00001111111111111111122335667899999999999999999999999999998753
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=392.04 Aligned_cols=364 Identities=16% Similarity=0.147 Sum_probs=242.4
Q ss_pred ccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCcc
Q 037042 66 SGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSA 145 (1002)
Q Consensus 66 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 145 (1002)
.+..+..++++++|++|+|++|.+++ +| .++.+++|++|+|++|++++ +| ++.+++|++|+|++|+|++. |
T Consensus 31 ~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~---~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 31 QATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD---LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSCC-C--
T ss_pred CcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec---cccCCCCCEEECcCCCCcee-e--
Confidence 34445566677777777777777774 34 56777777777777777764 34 45677777777777777753 3
Q ss_pred ccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCcccc
Q 037042 146 LSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL 225 (1002)
Q Consensus 146 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L 225 (1002)
++++++|++|+|++|++++ +| ++.+++|++|++++|++++ +| ++.+++|
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~--------------------------l~--l~~l~~L 150 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE--------------------------ID--VSHNTQL 150 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC--------------------------CC--CTTCTTC
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce--------------------------ec--cccCCcC
Confidence 6777777777777777764 33 6777777777777777763 22 4566777
Q ss_pred ceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCC
Q 037042 226 EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQK 305 (1002)
Q Consensus 226 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 305 (1002)
++|++++|+..+.+ .+..+++|+.|++++|++++ + ++..+++|++|++++|++++. .+..+++|++|+|++
T Consensus 151 ~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l---~l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~ 221 (457)
T 3bz5_A 151 TELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-L---DVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSS 221 (457)
T ss_dssp CEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-C---CCTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCS
T ss_pred CEEECCCCCccccc--ccccCCcCCEEECCCCccce-e---ccccCCCCCEEECcCCcCCee---ccccCCCCCEEECcC
Confidence 77777777544444 35666777777777777664 2 355677777777777777754 266778888888888
Q ss_pred CccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCC
Q 037042 306 NSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDC 385 (1002)
Q Consensus 306 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N 385 (1002)
|+++++ | ++.+++|+.|++++|+++.++ +..+++|+.|+++.|++ +.|++++|
T Consensus 222 N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~--------~~~l~~L~~L~l~~n~L----------------~~L~l~~n 274 (457)
T 3bz5_A 222 NKLTEI-D--VTPLTQLTYFDCSVNPLTELD--------VSTLSKLTTLHCIQTDL----------------LEIDLTHN 274 (457)
T ss_dssp SCCSCC-C--CTTCTTCSEEECCSSCCSCCC--------CTTCTTCCEEECTTCCC----------------SCCCCTTC
T ss_pred Cccccc-C--ccccCCCCEEEeeCCcCCCcC--------HHHCCCCCEEeccCCCC----------------CEEECCCC
Confidence 888873 4 777888888888888887765 34567788888777643 45677777
Q ss_pred CCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCc
Q 037042 386 NVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA 465 (1002)
Q Consensus 386 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 465 (1002)
.+.+.+| ++.+++|+.|++++|.+.+.+|. ..++|+.|++++| ++|+.|+|++|++++. +
T Consensus 275 ~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~- 334 (457)
T 3bz5_A 275 TQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D- 334 (457)
T ss_dssp TTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C-
T ss_pred ccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c-
Confidence 7777666 46677788888888877666664 3345555555544 4667777777777763 2
Q ss_pred cccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccc
Q 037042 466 CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAI 539 (1002)
Q Consensus 466 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 539 (1002)
++.+++|+.|++++|+++++ +.|..|++++|.+.|. +.+..|..+++++|+++|.+|..+
T Consensus 335 -l~~l~~L~~L~l~~N~l~~l--------~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 335 -VSHNTKLKSLSCVNAHIQDF--------SSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp -CTTCTTCSEEECCSSCCCBC--------TTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred -cccCCcCcEEECCCCCCCCc--------cccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 66667777777777766652 3455566666666653 244556666667776666666544
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-42 Score=382.68 Aligned_cols=287 Identities=34% Similarity=0.521 Sum_probs=230.4
Q ss_pred cccccCHHHHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeE
Q 037042 692 TWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISC 770 (1002)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~ 770 (1002)
...++++.++....++|+..+.||+|+||+||+|+..+|+.||||++..... .....+.+|++++++++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 4567888999999999999999999999999999988899999999875432 223468899999999999999999999
Q ss_pred EecCchhhHHHHHhhccCCCCChhHhhhccCC---cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNY---ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 771 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
+...+ ..++||||+++|+|.+++..... .+++..+..++.|++.||+|||..+..+|+||||||+||+++.++
T Consensus 96 ~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 96 CMTPT----ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171 (326)
T ss_dssp ECCSS----CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred EecCC----ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence 98766 45799999999999999986543 489999999999999999999943333999999999999999999
Q ss_pred cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc---cccccHHH
Q 037042 848 VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF---NEGMTLKH 924 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~---~~~~~~~~ 924 (1002)
.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 250 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250 (326)
T ss_dssp CEEECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred CEEeccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence 9999999999876543332 2344569999999999988889999999999999999999999997432 22333444
Q ss_pred HHHHHHhhh-hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 925 WVNDWLLIS-IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 925 ~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
|+....... ...+.+..... ..+..++..+.+++.+||+.+|++|||+.|++++|+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 251 WVKGLLKEKKLEALVDVDLQG------NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HHTTTTSSCCSTTSSCTTCTT------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHhhchhhhhhcChhhcc------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 443322221 22333322211 123456788999999999999999999999999998754
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=379.94 Aligned_cols=267 Identities=22% Similarity=0.318 Sum_probs=217.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...+ ..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK----RLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----EEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC----eeEE
Confidence 357889999999999999999865 68999999987766667788999999999999999999999998766 4579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 99999999999999886667999999999999999999999 899999999999999999999999999999876543
Q ss_pred Ccee------------eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 864 DQFV------------TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 864 ~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
.... ......||+.|+|||++.+..++.++|||||||++|||++|..|+..............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~----- 236 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV----- 236 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH-----
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh-----
Confidence 2211 11145799999999999999999999999999999999999999876433221110000
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
........+..++..+.+++.+||+.+|++|||+.|+++.|++++.......
T Consensus 237 -------------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~~ 288 (310)
T 3s95_A 237 -------------RGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHL 288 (310)
T ss_dssp -------------HHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHCC
T ss_pred -------------hccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCcc
Confidence 0000111123345678899999999999999999999999999986544433
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=372.70 Aligned_cols=253 Identities=26% Similarity=0.325 Sum_probs=209.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.++++++||||+++++++..++ ..++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~l 94 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD----ELWV 94 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC----EEEE
Confidence 35799999999999999999985 579999999998665556678899999999999999999999998776 4579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++|+|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 95 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp EEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 99999999999999765 4899999999999999999999 899999999999999999999999999999876544
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ . ... .........
T Consensus 170 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~-~~~-----~~~~~~~~~ 237 (297)
T 3fxz_A 170 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----L-YLI-----ATNGTPELQ 237 (297)
T ss_dssp TC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----H-HHH-----HHHCSCCCS
T ss_pred cc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----H-HHH-----HhCCCCCCC
Confidence 32 22456799999999999999999999999999999999999999976322111 0 000 000000111
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+..++..+.+++.+||+.||++|||++|+++|-+
T Consensus 238 --------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~ 272 (297)
T 3fxz_A 238 --------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQF 272 (297)
T ss_dssp --------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred --------CccccCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence 12234567899999999999999999999998744
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=364.77 Aligned_cols=282 Identities=29% Similarity=0.453 Sum_probs=227.7
Q ss_pred cccccCHHHHHHhhcCCCCC------ceeeccCcceEEEEEeCCCcEEEEEEeecc----cchhHHHHHHHHHHHHhccC
Q 037042 692 TWRRFSYLELCQATDGFSEN------NLIGRGGFGSVYKARIQDGMEVAVKVFNQQ----CGRAFKSFDVECEVMKSIRH 761 (1002)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h 761 (1002)
....|++.++..++.+|... +.||+|+||+||+|+. +++.||||++... .....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678899999999998877 8999999999999986 5889999998643 23346788999999999999
Q ss_pred CCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccC--CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN--YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 762 ~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
|||+++++++...+ ..++||||+++|+|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+
T Consensus 90 ~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~ 162 (307)
T 2nru_A 90 ENLVELLGFSSDGD----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSA 162 (307)
T ss_dssp TTBCCEEEEECSSS----SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGG
T ss_pred CCeEEEEEEEecCC----ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHH
Confidence 99999999998766 5679999999999999987532 35899999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG 919 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~ 919 (1002)
||+++.++.+||+|||+++...............||+.|+|||+..+ .++.++|||||||++|||++|+.||......
T Consensus 163 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~- 240 (307)
T 2nru_A 163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP- 240 (307)
T ss_dssp GEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-
T ss_pred HEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch-
Confidence 99999999999999999987665443333345679999999998765 5899999999999999999999999765433
Q ss_pred ccHHHHHHHHHhh--hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 920 MTLKHWVNDWLLI--SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 920 ~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.....+....... .+....+..... .+..++..+.+++.+||+.+|.+|||+.|++++|++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 241 QLLLDIKEEIEDEEKTIEDYIDKKMND-------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SBTTHHHHHHHTTSCCHHHHSCSSCSC-------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhhhhhhhhhhhccccccc-------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2233333322221 122333322211 123456789999999999999999999999999999864
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=383.94 Aligned_cols=371 Identities=20% Similarity=0.202 Sum_probs=239.0
Q ss_pred EEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEccccc
Q 037042 82 LFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYND 161 (1002)
Q Consensus 82 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 161 (1002)
.......+.+..+.+++++++|++|+|++|.+++ +| . +..+++|++|+|++|++++. | ++++++|++|+|++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~-l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~ 96 (457)
T 3bz5_A 23 EVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-G-IEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNK 96 (457)
T ss_dssp HHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-T-GGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSC
T ss_pred HHHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-h-hcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCC
Confidence 3334455666667788888888888888888885 45 2 46688888888888888853 4 7788888888888888
Q ss_pred CCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccccccc
Q 037042 162 FAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPA 241 (1002)
Q Consensus 162 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 241 (1002)
+++. | ++++++|++|+|++|++++ +| ++.+++|++|++++|++++. +
T Consensus 97 l~~~-~--~~~l~~L~~L~L~~N~l~~--------------------------l~--~~~l~~L~~L~l~~N~l~~l-~- 143 (457)
T 3bz5_A 97 LTNL-D--VTPLTKLTYLNCDTNKLTK--------------------------LD--VSQNPLLTYLNCARNTLTEI-D- 143 (457)
T ss_dssp CSCC-C--CTTCTTCCEEECCSSCCSC--------------------------CC--CTTCTTCCEEECTTSCCSCC-C-
T ss_pred Ccee-e--cCCCCcCCEEECCCCcCCe--------------------------ec--CCCCCcCCEEECCCCcccee-c-
Confidence 8753 3 7788888888888888763 33 66777788888888877763 2
Q ss_pred ccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccc
Q 037042 242 EIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRN 321 (1002)
Q Consensus 242 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 321 (1002)
+..+++|++|++++|+..+ .+ .+..+++|++|++++|+++++ | ++.+++
T Consensus 144 -l~~l~~L~~L~l~~n~~~~-------------------------~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~ 192 (457)
T 3bz5_A 144 -VSHNTQLTELDCHLNKKIT-------------------------KL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKL 192 (457)
T ss_dssp -CTTCTTCCEEECTTCSCCC-------------------------CC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTT
T ss_pred -cccCCcCCEEECCCCCccc-------------------------cc--ccccCCcCCEEECCCCcccee-c--cccCCC
Confidence 5555566666666554332 22 234445555555555555543 2 555555
Q ss_pred cchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCc
Q 037042 322 LKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNL 401 (1002)
Q Consensus 322 L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 401 (1002)
|+.|++++|+++.++ +..+++|++|++++|+++++ | ++.+++|
T Consensus 193 L~~L~l~~N~l~~~~--------l~~l~~L~~L~Ls~N~l~~i---------------------------p--~~~l~~L 235 (457)
T 3bz5_A 193 LNRLNCDTNNITKLD--------LNQNIQLTFLDCSSNKLTEI---------------------------D--VTPLTQL 235 (457)
T ss_dssp CCEEECCSSCCSCCC--------CTTCTTCSEEECCSSCCSCC---------------------------C--CTTCTTC
T ss_pred CCEEECcCCcCCeec--------cccCCCCCEEECcCCccccc---------------------------C--ccccCCC
Confidence 666666666655542 44555555555555555432 2 3445555
Q ss_pred cEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccc
Q 037042 402 IGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASN 481 (1002)
Q Consensus 402 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 481 (1002)
+.|++++|++++.. +..+++|+.|++++|+ |+.|++++|.+.+.+| ++.+++|+.|++++|
T Consensus 236 ~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n 296 (457)
T 3bz5_A 236 TYFDCSVNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHN 296 (457)
T ss_dssp SEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTC
T ss_pred CEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCC
Confidence 55555555555432 3345556666665543 3445666666665555 456677777777777
Q ss_pred cccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCc
Q 037042 482 ELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD 561 (1002)
Q Consensus 482 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 561 (1002)
.+.+.+|. ...+|+.|++++| ++|+.|++++|+|++. + ++++++|+.|++++|+|++
T Consensus 297 ~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~---- 353 (457)
T 3bz5_A 297 TQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD---- 353 (457)
T ss_dssp TTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB----
T ss_pred cccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC----
Confidence 66655553 2344555555544 5677778888888774 2 7778888888888888875
Q ss_pred ccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC
Q 037042 562 SFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 562 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
++.|..|++++|+++|. ..+..|..++|++|+++|.||..
T Consensus 354 ----l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 354 ----FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp ----CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred ----ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 24566777888888765 24556777888888888888864
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=382.62 Aligned_cols=261 Identities=28% Similarity=0.460 Sum_probs=212.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
.++|+..+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 357889999999999999999752 35679999997653 33457789999999999 899999999999876
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
+ ..++||||+++|+|.+++...+ ..+++..++.++.||++||+||| +++|+||||||+
T Consensus 160 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~ 232 (370)
T 2psq_A 160 G----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAAR 232 (370)
T ss_dssp S----SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGG
T ss_pred C----CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchh
Confidence 6 5679999999999999997653 24789999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
|||++.++.+||+|||+++...............+|+.|+|||++.+..|+.++|||||||++|||++ |+.||......
T Consensus 233 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~ 312 (370)
T 2psq_A 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 312 (370)
T ss_dssp GEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred hEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 99999999999999999987665443333344567889999999988899999999999999999999 99999764222
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
. .... +..+.... .+..++..+.+++.+||+.+|++||++.|++++|+++....
T Consensus 313 ~--~~~~-----------~~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 313 E--LFKL-----------LKEGHRMD-------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp G--HHHH-----------HHTTCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H--HHHH-----------HhcCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 1 1110 11110000 11234567899999999999999999999999999986543
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=375.12 Aligned_cols=250 Identities=23% Similarity=0.306 Sum_probs=207.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+. .+|+.||||++.+.. ....+.+.+|+++++.++||||+++++++...+ ..
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~~ 89 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK----TL 89 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----EE
Confidence 46799999999999999999986 579999999997542 334567889999999999999999999998766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 90 YLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 79999999999999997765 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ...... +..+
T Consensus 166 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~--------i~~~ 229 (328)
T 3fe3_A 166 VGGK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-----KELRER--------VLRG 229 (328)
T ss_dssp SSCG---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HHHC
T ss_pred CCCc---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-----HHHHHH--------HHhC
Confidence 4432 245679999999999888776 4899999999999999999999976321 111111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....+ ...+..+.+++.+||..||.+|||++|+++|-+
T Consensus 230 ~~~~p--------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~ 267 (328)
T 3fe3_A 230 KYRIP--------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267 (328)
T ss_dssp CCCCC--------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred CCCCC--------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHh
Confidence 11111 123456889999999999999999999999855
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-41 Score=368.50 Aligned_cols=270 Identities=24% Similarity=0.340 Sum_probs=208.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHh--ccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKS--IRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++..........+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999987 5899999998754 23455666777666 799999999998765432223457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC-----CCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY-----STPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
+||||+++|+|.++++.. .+++..+..++.||++||+|||... +++|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 4899999999999999999999322 678999999999999999999999999999
Q ss_pred ccccCCCceee--eccCCCCcccccccccCCC------CcCcccchHHHHHHHHHHHhC----------CCCCccccccc
Q 037042 858 KLLTREDQFVT--QTQTPATIGYMALEYGSEG------RVSTNGDVYNFGVMLMETFTG----------KKPTNEIFNEG 919 (1002)
Q Consensus 858 ~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg----------~~P~~~~~~~~ 919 (1002)
+.......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 87655433221 2344799999999998776 566899999999999999999 88887654444
Q ss_pred ccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 920 MTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
............. . ..........+..++..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 241 ~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 301 (301)
T 3q4u_A 241 PSFEDMRKVVCVD-------Q--QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301 (301)
T ss_dssp CCHHHHHHHHTTS-------C--CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred cchhhhhHHHhcc-------C--CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence 3333222211100 0 00111111223456788999999999999999999999999999873
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-41 Score=371.21 Aligned_cols=263 Identities=26% Similarity=0.348 Sum_probs=201.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..+|++.+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 110 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP----NLS 110 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT----CCE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----ceE
Confidence 45788999999999999999987 48899999987543 334567889999999999999999999998766 467
Q ss_pred HhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
+||||+++|+|.+++..... .+++..++.++.||++||+||| +.+ |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 99999999999999987543 4899999999999999999999 888 9999999999999999999999999997
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....... .
T Consensus 188 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~~~~~~~------~ 254 (309)
T 3p86_A 188 LKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QVVAAVGF------K 254 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHHHHHHH------S
T ss_pred cccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHh------c
Confidence 654322 1224457899999999999999999999999999999999999999764221 11111000 0
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
..... .+..++..+.+++.+||+.+|++|||+.|+++.|+.+.+...++.
T Consensus 255 ~~~~~--------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~ 304 (309)
T 3p86_A 255 CKRLE--------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304 (309)
T ss_dssp CCCCC--------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC------
T ss_pred CCCCC--------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCC
Confidence 00000 112244678899999999999999999999999999876554443
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=364.50 Aligned_cols=259 Identities=26% Similarity=0.401 Sum_probs=213.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|+..++..||||++..... ..+.+.+|++++++++||||+++++++.... ..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY----PIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----ceEEE
Confidence 457899999999999999999998888999999976532 3467899999999999999999999997766 45799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 9999999999999887667999999999999999999999 8999999999999999999999999999998765543
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
. .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||....... .... +......
T Consensus 159 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~--------~~~~~~~ 224 (268)
T 3sxs_A 159 Y-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-----VVLK--------VSQGHRL 224 (268)
T ss_dssp E-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHH--------HHTTCCC
T ss_pred h-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-----HHHH--------HHcCCCC
Confidence 3 23345567888999999988889999999999999999999 999997532211 1111 1111000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.. +..++..+.+++.+||+.+|++|||+.|++++|+++++.+
T Consensus 225 ~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 225 YR-------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp CC-------CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CC-------CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 00 1112456889999999999999999999999999998643
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-42 Score=388.06 Aligned_cols=259 Identities=27% Similarity=0.439 Sum_probs=211.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|++. +++.||||+++... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~ 188 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ----PIY 188 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS----SCE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC----CcE
Confidence 457888999999999999999976 78999999987543 233456889999999999999999999998766 467
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++...+..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 999999999999999876667899999999999999999999 89999999999999999999999999999986544
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........+|..|+|||++.++.++.++|||||||++|||++ |+.||....... .... +..+.
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~~-----------~~~~~ 332 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TREF-----------VEKGG 332 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHHH-----------HHTTC
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH-----------HHcCC
Confidence 322211122345778999999988899999999999999999998 999987642211 1110 00000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.. ..+..++..+.++|.+||+.+|++|||+.++++.|+++++
T Consensus 333 ~~-------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 333 RL-------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 00 0122345678999999999999999999999999999875
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=373.35 Aligned_cols=262 Identities=26% Similarity=0.426 Sum_probs=210.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|++.+.||+|+||+||+|+.. .+..||||+++.. .....+.+.+|++++++++||||+++++++..++ .
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 124 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR----L 124 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG----C
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----c
Confidence 56888899999999999999864 3556999999765 3345577899999999999999999999997665 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 67999999999999999877667999999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCc-eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 861 TREDQ-FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
..... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..... +.
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~--------~~ 268 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVISS--------VE 268 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHH--------HH
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHH--------HH
Confidence 54322 222334456888999999988899999999999999999999 99999664221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
...... .+..++..+.+++.+||..+|++|||+.|+++.|+++......
T Consensus 269 ~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 269 EGYRLP-------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp TTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred cCCCCC-------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 110000 1123456789999999999999999999999999998765443
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=369.14 Aligned_cols=265 Identities=22% Similarity=0.276 Sum_probs=214.4
Q ss_pred cccCHHHHHHhhcC----------CCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCC
Q 037042 694 RRFSYLELCQATDG----------FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHR 762 (1002)
Q Consensus 694 ~~~~~~~~~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 762 (1002)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34666776666653 666789999999999999866 7999999999876666677889999999999999
Q ss_pred CcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCee
Q 037042 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVL 842 (1002)
Q Consensus 763 niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NIL 842 (1002)
||+++++++...+ ..++||||+++|+|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+
T Consensus 103 niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIl 173 (321)
T 2c30_A 103 NVVEMYKSYLVGE----ELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSIL 173 (321)
T ss_dssp TBCCEEEEEEETT----EEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEE
T ss_pred CcceEEEEEEECC----EEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEE
Confidence 9999999998766 467999999999999998754 4899999999999999999999 899999999999999
Q ss_pred eCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccH
Q 037042 843 LGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922 (1002)
Q Consensus 843 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~ 922 (1002)
++.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---- 247 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---- 247 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----
T ss_pred ECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 99999999999999987654322 224557999999999999999999999999999999999999999753211
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
..... +.....+.... ....+..+.+++.+||+.+|++|||+.|+++|-+-
T Consensus 248 -~~~~~-----~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~ 298 (321)
T 2c30_A 248 -QAMKR-----LRDSPPPKLKN--------SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298 (321)
T ss_dssp -HHHHH-----HHHSSCCCCTT--------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred -HHHHH-----HhcCCCCCcCc--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 11111 11111111110 11234568899999999999999999999998653
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-41 Score=363.76 Aligned_cols=258 Identities=29% Similarity=0.436 Sum_probs=213.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++.... ..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 83 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLV 83 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----SEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----ceEEE
Confidence 356888999999999999999988899999999976533 3467899999999999999999999998766 45799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++|+|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 9999999999999877767999999999999999999999 8999999999999999999999999999998665432
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
. .......+|..|+|||++.+..++.++||||+||++|||++ |+.||...... ..... +......
T Consensus 161 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~--------~~~~~~~ 226 (269)
T 4hcu_A 161 Y-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--------ISTGFRL 226 (269)
T ss_dssp H-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH--------HHTTCCC
T ss_pred c-ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHH--------HhcCccC
Confidence 1 12244567888999999988899999999999999999999 99998763221 11111 1111000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. .+...+..+.+++.+||+.+|++|||+.|++++|+++.+.
T Consensus 227 ~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 Y-------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp C-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-------CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 0 0112345688999999999999999999999999998764
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=369.93 Aligned_cols=255 Identities=19% Similarity=0.265 Sum_probs=210.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... .....+.+|+++++.++||||+++++++...+ ..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~----~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME----ELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT----EEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC----EEEE
Confidence 467999999999999999999865 68999999987543 34567889999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC--CCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD--NMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~~~ 861 (1002)
||||+++|+|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++. ++.+||+|||+++...
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 99999999999999877667999999999999999999999 899999999999999987 7999999999998876
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
..... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+....
T Consensus 156 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~--------~i~~~~ 219 (321)
T 1tki_A 156 PGDNF---RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIE--------NIMNAE 219 (321)
T ss_dssp TTCEE---EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHHTC
T ss_pred CCCcc---ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----HHHH--------HHHcCC
Confidence 54432 3346899999999999888999999999999999999999999763221 1111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
..... .....++..+.+++.+||..||++|||+.|+++|-+-
T Consensus 220 ~~~~~----~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~ 261 (321)
T 1tki_A 220 YTFDE----EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL 261 (321)
T ss_dssp CCCCH----HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred CCCCh----hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhh
Confidence 11111 0112345678999999999999999999999998663
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=372.67 Aligned_cols=254 Identities=21% Similarity=0.282 Sum_probs=207.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch------hHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR------AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.+.|++.+.||+|+||+||+|+.. +|+.||+|++.+.... ..+.+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT-- 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--
Confidence 467999999999999999999865 6999999999764321 3577899999999999999999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEec
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSD 853 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~D 853 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 89 --~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 89 --DVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp --EEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred --EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 5689999999999999997654 5899999999999999999999 89999999999999998776 799999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++....... .....||+.|+|||++.+..|+.++||||+||++|||++|+.||...... +..
T Consensus 163 FG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-----~~~------- 227 (361)
T 2yab_A 163 FGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----ETL------- 227 (361)
T ss_dssp CSSCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHH-------
T ss_pred cCCceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-----HHH-------
Confidence 999987765332 24457999999999999989999999999999999999999999763221 111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+......... ......+..+.+++.+||..||++|||+.|+++|-+
T Consensus 228 -~~i~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 275 (361)
T 2yab_A 228 -ANITAVSYDFDE----EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (361)
T ss_dssp -HHHHTTCCCCCH----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred -HHHHhcCCCCCc----hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence 111111111111 111234567899999999999999999999998744
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=364.31 Aligned_cols=273 Identities=26% Similarity=0.416 Sum_probs=210.8
Q ss_pred hcCCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR-- 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT--
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC--
Confidence 35788999999999999999984 26889999999877666678899999999999999999999998653311
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 346999999999999999887667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc------cHHHHHHHHHhh
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM------TLKHWVNDWLLI 932 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~------~~~~~~~~~~~~ 932 (1002)
....... .......+|..|+|||++.+..++.++|||||||++|||++|..|+.....+.. ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF---- 239 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH----
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH----
Confidence 6543322 122344577889999999888999999999999999999999999876432100 00000000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
...+....... ...+..++..+.+++.+||+.+|++|||+.|++++|+++.+..
T Consensus 240 ~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 240 HLIELLKNNGR------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHHTTCC------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhccCc------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 00000000000 0012235677999999999999999999999999999997653
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=369.54 Aligned_cols=251 Identities=22% Similarity=0.279 Sum_probs=206.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||+|++++.. ......+.+|+++++.++||||+++++++...+ .
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----~ 79 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----R 79 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS----E
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC----E
Confidence 357899999999999999999865 69999999997642 334567889999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 80 LCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 679999999999999997654 4899999999999999999999 899999999999999999999999999999864
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...... ..... +...
T Consensus 156 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~--------i~~~ 220 (337)
T 1o6l_A 156 ISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFEL--------ILME 220 (337)
T ss_dssp CCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHHC
T ss_pred ccCCC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH-----HHHHH--------HHcC
Confidence 33221 224567999999999999999999999999999999999999999753211 11111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
.... +...+..+.+++.+||+.+|++|| +++|+++|-.
T Consensus 221 ~~~~--------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 221 EIRF--------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred CCCC--------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence 1111 112346688999999999999999 8999998843
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=380.46 Aligned_cols=271 Identities=23% Similarity=0.391 Sum_probs=215.7
Q ss_pred cCHHHHHHhhcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCccee
Q 037042 696 FSYLELCQATDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKI 767 (1002)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~ 767 (1002)
+...+.....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34444455678899999999999999999973 246889999997653 33456789999999999 79999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHhhhccCC---------------------------------------------
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY--------------------------------------------- 802 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------- 802 (1002)
++++...+. ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~---~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 92 LGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp EEEECSTTS---CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeeecCCC---ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 999876542 35799999999999999976532
Q ss_pred --------------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 803 --------------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 803 --------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
.+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 2889999999999999999999 89999999999999999999999999999987755
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........||+.|+|||++.+..++.++|||||||++|||++ |+.||........ ....+. . ..
T Consensus 246 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~---~--------~~ 313 (359)
T 3vhe_A 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLK---E--------GT 313 (359)
T ss_dssp CTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHH---H--------TC
T ss_pred cccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHH---c--------CC
Confidence 444444455678999999999988899999999999999999998 9999976432211 111000 0 00
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
... .+..++..+.+++.+||+.+|++|||+.|++++|+++...
T Consensus 314 ~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 314 RMR-------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 000 0112345688999999999999999999999999988654
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-39 Score=375.21 Aligned_cols=212 Identities=29% Similarity=0.412 Sum_probs=111.3
Q ss_pred CCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceE
Q 037042 76 LSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRIL 155 (1002)
Q Consensus 76 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 155 (1002)
+++|+.|++++|.++ .+| .+..+++|++|+|++|++.+ +|. +.++++|++|+|++|.+++..| ++++++|++|
T Consensus 45 l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTD-ITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred hccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCC-chh--hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 445666666666665 344 25556666666666666653 232 4556666666666666664333 6666666666
Q ss_pred EcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccc
Q 037042 156 RLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235 (1002)
Q Consensus 156 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l 235 (1002)
+|++|++++. |. +.++++|++|+|++|.+++ +| .++.+++|++|+++ |.+
T Consensus 118 ~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~--------------------------~~-~~~~l~~L~~L~l~-~~~ 167 (466)
T 1o6v_A 118 TLFNNQITDI-DP-LKNLTNLNRLELSSNTISD--------------------------IS-ALSGLTSLQQLSFG-NQV 167 (466)
T ss_dssp ECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC--------------------------CG-GGTTCTTCSEEEEE-ESC
T ss_pred ECCCCCCCCC-hH-HcCCCCCCEEECCCCccCC--------------------------Ch-hhccCCcccEeecC-Ccc
Confidence 6666666643 22 6666666666666666653 22 24555666666664 333
Q ss_pred ccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccc
Q 037042 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPST 315 (1002)
Q Consensus 236 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 315 (1002)
.+..+ +.++++| ++|++++|++++. ..+..+++|++|++++|.+++..|
T Consensus 168 ~~~~~--~~~l~~L-------------------------~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-- 216 (466)
T 1o6v_A 168 TDLKP--LANLTTL-------------------------ERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 216 (466)
T ss_dssp CCCGG--GTTCTTC-------------------------CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred cCchh--hccCCCC-------------------------CEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--
Confidence 32211 3333333 3333333333321 124445555556666655554433
Q ss_pred cccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 316 FGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 316 ~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
++.+++|+.|++++|+++.++ .+..+++|+.|++++|.+.
T Consensus 217 ~~~l~~L~~L~l~~n~l~~~~-------~l~~l~~L~~L~l~~n~l~ 256 (466)
T 1o6v_A 217 LGILTNLDELSLNGNQLKDIG-------TLASLTNLTDLDLANNQIS 256 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCCG-------GGGGCTTCSEEECCSSCCC
T ss_pred ccccCCCCEEECCCCCcccch-------hhhcCCCCCEEECCCCccc
Confidence 445555555555555555432 1344455555555555443
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=369.41 Aligned_cols=257 Identities=20% Similarity=0.284 Sum_probs=207.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++ ..+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~----~~~ 81 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN----IQY 81 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS----EEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC----eEE
Confidence 367999999999999999999865 78999999986543 233466889999999999999999999998776 557
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.+..
T Consensus 82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 82 LFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 9999999999999997654 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........||+.|+|||++.+..+ +.++||||+||++|||++|+.||............|.. ..
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~------------~~ 225 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE------------KK 225 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHT------------TC
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc------------cc
Confidence 443333455689999999999877765 78999999999999999999999765433222222111 00
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.... ....++..+.+++.+||+.||++|||+.|+++|-+-
T Consensus 226 ~~~~------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~ 265 (323)
T 3tki_A 226 TYLN------PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265 (323)
T ss_dssp TTST------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred ccCC------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence 0000 012234667899999999999999999999998653
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=365.62 Aligned_cols=270 Identities=20% Similarity=0.261 Sum_probs=206.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+.||+|+||+||+|+..+|+.||||++.... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 95 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER----CLT 95 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS----CEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC----EEE
Confidence 46799999999999999999998889999999987542 234567889999999999999999999998766 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 96 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99999985 888888877667999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh---hhhcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS---IMKIV 938 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~i~ 938 (1002)
... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ............. .....
T Consensus 172 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 172 PVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp CCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGT
T ss_pred Ccc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhh
Confidence 322 2244578999999998876 568999999999999999999999997643332 1222221111000 00000
Q ss_pred ------cC--ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 ------DG--SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ------~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+. ....... .....+....++.+++.+||++||++|||++|+++|-+
T Consensus 249 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 303 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKP-WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303 (311)
T ss_dssp TSHHHHSCCCCCCCCCC-HHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred ccchhhhcccccccCCc-HHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 00 0000000 00111223467889999999999999999999998744
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=385.43 Aligned_cols=265 Identities=17% Similarity=0.200 Sum_probs=210.1
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEec
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1002)
+.++....++|+..++||+|+||+||+|+.. +++.||||++.+.. ......+.+|+.+++.++||||+++++++..
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3344455688999999999999999999866 58899999997532 1223447889999999999999999999988
Q ss_pred CchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 774 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
.+ ..++||||+++|+|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 146 ~~----~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 146 DN----NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp SS----EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred CC----EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcc
Confidence 76 568999999999999999886567999999999999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
||+|+........ .....+||+.|+|||++. ...|+.++|||||||++|||++|+.||........ ......
T Consensus 219 FGla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~- 295 (437)
T 4aw2_A 219 FGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMN- 295 (437)
T ss_dssp CTTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHT-
T ss_pred hhhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-HHhhhh-
Confidence 9999876544332 234568999999999876 56789999999999999999999999976322111 111100
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCC--CCCHHHHHHHHH
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEK--RINAKEIVTRLL 986 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~evl~~L~ 986 (1002)
.. ....-+.. ....+..+.+++.+|+..+|++ ||+++|+++|-+
T Consensus 296 ---~~-~~~~~p~~----------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 296 ---HK-ERFQFPTQ----------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp ---HH-HHCCCCSS----------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred ---cc-ccccCCcc----------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 00 00000000 0113456889999999988888 999999999854
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-39 Score=374.13 Aligned_cols=217 Identities=25% Similarity=0.372 Sum_probs=129.8
Q ss_pred ccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccc
Q 037042 292 IFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371 (1002)
Q Consensus 292 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (1002)
+.++++|++|++++|.+++. ..+..+++|++|++++|+++.++. +..+++|+.|++++|.+.
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-------~~~l~~L~~L~l~~n~l~--------- 234 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-------LGILTNLDELSLNGNQLK--------- 234 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-------GGGCTTCCEEECCSSCCC---------
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-------ccccCCCCEEECCCCCcc---------
Confidence 55566666666666666543 235555555555555555554432 233444444444444443
Q ss_pred cccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccE
Q 037042 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQ 451 (1002)
Q Consensus 372 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 451 (1002)
+. ..+..+++|+.|++++|++++..| +..+++|+.|++++|.+++..+ +..+++|+.
T Consensus 235 -----------------~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 291 (466)
T 1o6v_A 235 -----------------DI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTN 291 (466)
T ss_dssp -----------------CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred -----------------cc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCe
Confidence 22 245556666666666666665443 6666667777777766664433 566666666
Q ss_pred EEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCcc
Q 037042 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531 (1002)
Q Consensus 452 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 531 (1002)
|+|++|++++..+ +..+++|+.|++++|++.+..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++
T Consensus 292 L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred EEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCcc
Confidence 6676666665433 5666666666666666666544 56666666666666666653 3566666666666666666
Q ss_pred CccCcccccCCccccEEEccCeeecc
Q 037042 532 SGVIPNAIGGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 532 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ 557 (1002)
++..| +..+++|+.|++++|.+++
T Consensus 366 ~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 366 SDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred Cccch--hhcCCCCCEEeccCCcccC
Confidence 66555 6666666666666666664
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=362.12 Aligned_cols=270 Identities=21% Similarity=0.343 Sum_probs=211.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +++.||+|++... .....+.+.+|+.++++++||||+++++++...+ .
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----~ 85 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD----C 85 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS----E
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC----e
Confidence 457999999999999999999854 6899999998643 2334577899999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 679999999999999997765 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ . .+....
T Consensus 162 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-----~--------~~~~~~ 227 (294)
T 4eqm_A 162 SETSLT-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-----A--------IKHIQD 227 (294)
T ss_dssp --------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-----H--------HHHHSS
T ss_pred cccccc-ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-----H--------HHHhhc
Confidence 543221 22345689999999999998999999999999999999999999976422111 0 011111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-CHHHHHHHHHhhcccCCCCCCCC
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-NAKEIVTRLLKINDLDFNGYPSY 999 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-t~~evl~~L~~i~~~~~~~~~~y 999 (1002)
.... ........++..+.+++.+|++.+|++|| +++++.+.|+++.........-|
T Consensus 228 ~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~~~ 284 (294)
T 4eqm_A 228 SVPN---VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVY 284 (294)
T ss_dssp CCCC---HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCCCC
T ss_pred cCCC---cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcchh
Confidence 1110 01111223557799999999999999999 89999999998876555444433
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=362.89 Aligned_cols=259 Identities=23% Similarity=0.381 Sum_probs=210.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++.++..||||++..... ..+.+.+|++++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR----PIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----SEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC----CeEEE
Confidence 457889999999999999999998888999999976532 3467889999999999999999999998766 45799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++|+|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 9999999999999876667999999999999999999999 8999999999999999999999999999998765432
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
. .......+|+.|+|||++.+..++.++||||+||++|||++ |+.||....... .... +........
T Consensus 175 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~-----~~~~~~~~~- 242 (283)
T 3gen_A 175 Y-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-----TAEH-----IAQGLRLYR- 242 (283)
T ss_dssp H-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHH-----HHTTCCCCC-
T ss_pred c-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH-----HHHH-----HhcccCCCC-
Confidence 1 12244567888999999988899999999999999999998 999997643211 1110 111100000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
+..++..+.+++.+||+.+|++|||+.|++++|+++.+.+
T Consensus 243 ---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 243 ---------PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp ---------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1122456889999999999999999999999999987654
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=376.95 Aligned_cols=267 Identities=27% Similarity=0.390 Sum_probs=216.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
.++|++.+.||+|+||+||+|+.. .+..||||++.... ......+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357889999999999999999852 24679999997653 33457789999999999 899999999999876
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
+ ..++||||+++|+|.+++.... ..+++..++.++.||++||+||| +.+|+||||||+
T Consensus 148 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~ 220 (382)
T 3tt0_A 148 G----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAAR 220 (382)
T ss_dssp S----SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGG
T ss_pred C----ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcc
Confidence 6 5679999999999999998654 25899999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~- 299 (382)
T 3tt0_A 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV- 299 (382)
T ss_dssp GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-
T ss_pred eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 99999999999999999987765443333455567889999999999999999999999999999999 9999875322
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCCCC
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGYPS 998 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~~~ 998 (1002)
.+........ .... .+..++..+.+++.+||+.+|++|||+.|++++|+++..........
T Consensus 300 ----~~~~~~~~~~-----~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~ 360 (382)
T 3tt0_A 300 ----EELFKLLKEG-----HRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMG 360 (382)
T ss_dssp ----HHHHHHHHTT-----CCCC----------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC--
T ss_pred ----HHHHHHHHcC-----CCCC----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCC
Confidence 1111111100 0000 01224567899999999999999999999999999998766555443
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=377.62 Aligned_cols=259 Identities=24% Similarity=0.452 Sum_probs=198.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..+|++.+.||+|+||+||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 119 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK---- 119 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC----
Confidence 357999999999999999999864 57789999997643 344577999999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 567999999999999999887667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
....... .......+|..|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~~--------i 263 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKA--------V 263 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHHH--------H
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH--------H
Confidence 6543221 11223345778999999988899999999999999999998 99999654221 11111 0
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..+... . .+..++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 264 ~~~~~~-~------~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 264 DEGYRL-P------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp HTTEEC-C------CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCC-C------CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 000000 0 112345678999999999999999999999999998853
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-41 Score=378.52 Aligned_cols=258 Identities=25% Similarity=0.419 Sum_probs=208.0
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
++|+..+.||+|+||+||+|++. +++.||||+++... ......+.+|+.++++++||||+++++++....
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--- 147 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--- 147 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---
Confidence 56888999999999999999843 46789999997543 344567889999999999999999999998766
Q ss_pred HHHHHhhccCCCCChhHhhhccC------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC---cE
Q 037042 779 LFKALALEYMPHGSLEKYLYSSN------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM---VA 849 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~---~~ 849 (1002)
..++||||+++|+|.+++...+ ..+++..++.++.||++||+||| +++|+||||||+|||++.++ .+
T Consensus 148 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 148 -PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp -SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred -CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceE
Confidence 4579999999999999998653 35889999999999999999999 89999999999999999554 59
Q ss_pred EEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHH
Q 037042 850 HLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~ 928 (1002)
||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||...... +....
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-----~~~~~ 298 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEF 298 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHH
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 9999999986644332223344567899999999988899999999999999999998 99999764221 11111
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+....... .+..++..+.+++.+||+.+|++|||+.|++++|+.+..
T Consensus 299 --------i~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 299 --------VTSGGRMD-------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp --------HHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HHcCCCCC-------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 11111000 012345668899999999999999999999999998874
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=372.08 Aligned_cols=264 Identities=28% Similarity=0.464 Sum_probs=212.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
..++|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK- 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC-
Confidence 4578999999999999999999864 35889999998653 334677899999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-----------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEE
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN-----------------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH 833 (1002)
..++||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+|
T Consensus 124 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH 197 (343)
T 1luf_A 124 ---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH 197 (343)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred ---ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence 5689999999999999997642 45889999999999999999999 899999
Q ss_pred ccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCC
Q 037042 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPT 912 (1002)
Q Consensus 834 rDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~ 912 (1002)
|||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999987654433333345678899999999888889999999999999999999 99999
Q ss_pred cccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 913 NEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
...... +... .+.++.... .+..++..+.+++.+||+.+|++||++.|++++|+++.+..
T Consensus 278 ~~~~~~-----~~~~--------~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 278 YGMAHE-----EVIY--------YVRDGNILA-------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TTSCHH-----HHHH--------HHHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCChH-----HHHH--------HHhCCCcCC-------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 753221 1111 111111110 11234567899999999999999999999999999988655
Q ss_pred CC
Q 037042 993 FN 994 (1002)
Q Consensus 993 ~~ 994 (1002)
..
T Consensus 338 ~~ 339 (343)
T 1luf_A 338 EG 339 (343)
T ss_dssp --
T ss_pred hh
Confidence 43
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=373.14 Aligned_cols=251 Identities=23% Similarity=0.294 Sum_probs=201.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++++.. ......+.+|.++++.+ +||||+++++++...+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 97 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD---- 97 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC----
Confidence 468999999999999999999865 68999999997642 23456678899999988 7999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 98 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 98 RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 5689999999999999997765 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...... +... .+..
T Consensus 174 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~--------~i~~ 238 (353)
T 3txo_A 174 GICNGV--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-----DLFE--------AILN 238 (353)
T ss_dssp SCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHH
T ss_pred cccCCc--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHc
Confidence 433221 234567999999999998888999999999999999999999999764221 1111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH------HHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA------KEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~------~evl~~L~ 986 (1002)
.....+ ...+..+.+++.+||+.+|++||++ .|+++|-.
T Consensus 239 ~~~~~p--------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~ 283 (353)
T 3txo_A 239 DEVVYP--------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPF 283 (353)
T ss_dssp CCCCCC--------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGG
T ss_pred CCCCCC--------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCc
Confidence 111111 1134568899999999999999998 88887743
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=362.79 Aligned_cols=271 Identities=24% Similarity=0.326 Sum_probs=207.2
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc--cCCCcceeeeEEecCchhhHH
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI--RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~ 780 (1002)
...++|++.+.||+|+||+||+|+.. ++.||||++.... ......|.+++... +||||+++++++.........
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34568999999999999999999876 8999999986542 23445566666554 899999999998876433235
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC--------CcEEccCCCCCeeeCCCCcEEEe
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST--------PVIHCDLKPSNVLLGDNMVAHLS 852 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~--------~iiHrDlkp~NILl~~~~~~kl~ 852 (1002)
.++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||+
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred eEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 57999999999999999765 4899999999999999999999 66 99999999999999999999999
Q ss_pred cccccccccCCCceee--eccCCCCcccccccccCCCCcCcc------cchHHHHHHHHHHHhC----------CCCCcc
Q 037042 853 DFGITKLLTREDQFVT--QTQTPATIGYMALEYGSEGRVSTN------GDVYNFGVMLMETFTG----------KKPTNE 914 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGv~l~elltg----------~~P~~~ 914 (1002)
|||+++.+........ .....||+.|+|||++.+..++.+ +|||||||++|||++| +.||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 9999987654332211 134579999999999887766655 9999999999999999 666655
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..........+.... .................++..+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 265 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 265 LVPSDPSYEDMREIV---------CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TSCSSCCHHHHHHHH---------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hcCCCCchhhhHHHH---------hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 433333322222111 00111111111223346788899999999999999999999999999998764
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-40 Score=357.24 Aligned_cols=253 Identities=25% Similarity=0.395 Sum_probs=204.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccch-------hHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGR-------AFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++...... ..+.+.+|++++++++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46799999999999999999986 47899999998643221 1267889999999999999999999986554
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeCCCCc-----E
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLGDNMV-----A 849 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~~~~~-----~ 849 (1002)
++||||+++|+|.+++......+++..+..++.|++.|++||| +.+ |+||||||+||+++.++. +
T Consensus 97 -----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 97 -----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp -----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred -----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeE
Confidence 4899999999999999877777999999999999999999999 888 999999999999988776 9
Q ss_pred EEecccccccccCCCceeeeccCCCCccccccccc--CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 850 HLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG--SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
||+|||+++..... .....||+.|+|||++ ....++.++||||+||++|||++|+.||............
T Consensus 169 kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~--- 240 (287)
T 4f0f_A 169 KVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--- 240 (287)
T ss_dssp EECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHH---
T ss_pred EeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHH---
Confidence 99999999754432 2346789999999998 3456789999999999999999999999764332211111
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
...... .... .+..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~~~~~~----~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 241 MIREEG----LRPT----------IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHSC----CCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHhccC----CCCC----------CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 100000 0000 1123456789999999999999999999999999874
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-40 Score=364.74 Aligned_cols=253 Identities=19% Similarity=0.284 Sum_probs=205.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc------hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
+.|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++....
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 87 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--- 87 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 46889999999999999999865 689999999875432 13577899999999999999999999998766
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEecc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSDF 854 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~Df 854 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 88 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 88 -DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp -EEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred -EEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 5679999999999999997654 5899999999999999999999 89999999999999999877 8999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
|+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... +....
T Consensus 163 g~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~------ 228 (326)
T 2y0a_A 163 GLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----ETLAN------ 228 (326)
T ss_dssp TTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHHH------
T ss_pred CCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-----HHHHH------
Confidence 99987754332 23457999999999999889999999999999999999999999653221 11111
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+......... .....++..+.+++.+||..||++|||+.|+++|-+
T Consensus 229 --~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 274 (326)
T 2y0a_A 229 --VSAVNYEFED----EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274 (326)
T ss_dssp --HHHTCCCCCH----HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred --HHhcCCCcCc----cccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 1101110010 111234567889999999999999999999998743
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=369.90 Aligned_cols=258 Identities=25% Similarity=0.398 Sum_probs=203.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcE----EEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGME----VAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.++|+..+.||+|+||+||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---
Confidence 356899999999999999999854 4443 5888775432 345578899999999999999999999998765
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++|+||+++|+|.+++...+..+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 91 --~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 --VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp --EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred --eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCccee
Confidence 35899999999999999887777999999999999999999999 8899999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
...............+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ....+.
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~---------- 233 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILE---------- 233 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHH----------
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHH----------
Confidence 8765544434455567889999999999999999999999999999999 999997643221 111110
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++||++.|++++|+++..
T Consensus 234 --~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 234 --KGERLP------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --TTCCCC------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred --cCCCCC------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 000000 112244578899999999999999999999999988753
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-40 Score=361.68 Aligned_cols=248 Identities=23% Similarity=0.272 Sum_probs=205.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+.+|+.+++.++||||+++++++.... .
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----~ 80 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ----Q 80 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS----E
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC----E
Confidence 357899999999999999999865 69999999997642 234567888999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 81 IFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp EEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 679999999999999998754 4899999999999999999999 999999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ...+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... .++...
T Consensus 157 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~--------~~i~~~ 218 (318)
T 1fot_A 157 PDVT-----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-----KTY--------EKILNA 218 (318)
T ss_dssp SSCB-----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHH--------HHHHHC
T ss_pred CCcc-----ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----HHH--------HHHHhC
Confidence 4321 3457999999999999999999999999999999999999999763211 111 111111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
....+ ...+..+.+++.+|+..+|++|| +++|+++|-+
T Consensus 219 ~~~~p--------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 219 ELRFP--------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp CCCCC--------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CCCCC--------CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 11111 12345688999999999999999 8999998743
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-40 Score=364.96 Aligned_cols=249 Identities=22% Similarity=0.342 Sum_probs=205.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|.+.+.||+|+||.||+|+. .+++.||||++.+.. ......+.+|+++++.++||||+++++++...+ .
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~ 83 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT----D 83 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----E
Confidence 36799999999999999999986 578999999987532 223467889999999999999999999998776 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+ +|+|.+++...+ .+++..+..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~~lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 84 IVMVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp EEEEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EEEEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 67999999 789999887655 4899999999999999999999 889999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... ....+||+.|+|||++.+..+ ++++||||+||++|||++|+.||........ ..++..
T Consensus 159 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------~~~i~~ 222 (336)
T 3h4j_B 159 TDGNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------FKKVNS 222 (336)
T ss_dssp TTSBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------BCCCCS
T ss_pred cCCcc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------HHHHHc
Confidence 54432 234579999999999988776 7899999999999999999999976432211 111111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... .+...+..+.+++.+||+.||.+|||++|+++|-+
T Consensus 223 ~~~~--------~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 223 CVYV--------MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp SCCC--------CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred CCCC--------CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 1111 11223466889999999999999999999999866
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=372.38 Aligned_cols=273 Identities=16% Similarity=0.190 Sum_probs=208.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC------CcEEEEEEeecccchhH-----------HHHHHHHHHHHhccCCCccee
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFNQQCGRAF-----------KSFDVECEVMKSIRHRNIIKI 767 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~ 767 (1002)
.++|++.+.||+|+||+||+|++.. ++.||||++........ .....|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998654 47899999876532111 123345666777889999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC--C
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG--D 845 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~--~ 845 (1002)
++++........+.++||||+ +++|.+++......+++..++.++.||+.||+||| +.+|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 999876532223467999999 99999999887667999999999999999999999 88999999999999998 8
Q ss_pred CCcEEEecccccccccCCCceee-----eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc
Q 037042 846 NMVAHLSDFGITKLLTREDQFVT-----QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM 920 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~ 920 (1002)
++.+||+|||+++.+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 89999999999987654322111 1334599999999999999999999999999999999999999986433221
Q ss_pred cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
...+........+..+.+.... ...++..+.+++..||+.+|++||++.++++.|+++-..
T Consensus 270 -~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 270 -YVRDSKIRYRENIASLMDKCFP---------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp -HHHHHHHHHHHCHHHHHHHHSC---------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhhhhHHHHHHHhcc---------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 1111111111122222211110 122356799999999999999999999999999887643
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-40 Score=377.25 Aligned_cols=255 Identities=20% Similarity=0.271 Sum_probs=205.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----~~ 85 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG----HH 85 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS----EE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC----EE
Confidence 46799999999999999999975 479999999997643 234567889999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~ 858 (1002)
++||||+++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+|||++ .++.+||+|||+++
T Consensus 86 ~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 79999999999999997765 4899999999999999999999 89999999999999998 56889999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||...... ..... +.
T Consensus 162 ~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-----~~~~~--------i~ 226 (444)
T 3soa_A 162 EVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-----RLYQQ--------IK 226 (444)
T ss_dssp CCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHH--------HH
T ss_pred EecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-----HHHHH--------HH
Confidence 7654332 224567999999999999989999999999999999999999999653221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+....... ....++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 227 ~~~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~ 270 (444)
T 3soa_A 227 AGAYDFPSP----EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270 (444)
T ss_dssp HTCCCCCTT----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred hCCCCCCcc----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 111110000 01123567889999999999999999999998743
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-40 Score=371.13 Aligned_cols=255 Identities=19% Similarity=0.248 Sum_probs=208.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++.... ..++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY----EMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS----EEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC----EEEE
Confidence 457999999999999999999865 68999999998765555678899999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC--CCCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG--DNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~--~~~~~kl~DfGla~~~~ 861 (1002)
||||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||+++...
T Consensus 126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 99999999999999877667999999999999999999999 89999999999999997 45789999999998776
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
..... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....... ...
T Consensus 203 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~~~~i~--------~~~ 266 (387)
T 1kob_A 203 PDEIV---KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-----ETLQNVK--------RCD 266 (387)
T ss_dssp TTSCE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHHHHH--------HCC
T ss_pred CCcce---eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-----HHHHHHH--------hCC
Confidence 54322 2346899999999999999999999999999999999999999763211 1111110 000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... ....++..+.+++.+||..||++|||+.|+++|-+
T Consensus 267 ~~~~~~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 307 (387)
T 1kob_A 267 WEFDED----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW 307 (387)
T ss_dssp CCCCSS----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred CCCCcc----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCcc
Confidence 000000 01123467889999999999999999999998844
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-40 Score=364.40 Aligned_cols=265 Identities=26% Similarity=0.479 Sum_probs=195.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC-C---cEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD-G---MEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.++|+..+.||+|+||+||+|+... + ..||||+++.. .....+.+.+|++++++++||||+++++++.......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4679999999999999999998653 3 27999998754 3445678999999999999999999999987765221
Q ss_pred H--HHHHhhccCCCCChhHhhhccC-----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 779 L--FKALALEYMPHGSLEKYLYSSN-----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 779 ~--~~~lv~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
. ..++||||+++|+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEE
Confidence 1 1168999999999999986532 15899999999999999999999 899999999999999999999999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||........ ..
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~------ 250 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YN------ 250 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HH------
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HH------
Confidence 99999987765544334445567889999999988899999999999999999999 9999976433211 11
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.+....... .+..++..+.+++.+||+.||++|||+.|+++.|+++-..-
T Consensus 251 -----~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 251 -----YLIGGNRLK-------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp -----HHHTTCCCC-------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -----HHhcCCCCC-------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111111000 01224467899999999999999999999999999887543
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-40 Score=371.75 Aligned_cols=256 Identities=20% Similarity=0.268 Sum_probs=203.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..++||+|+||+||+|+.. +++.||||++++.. ......+..|..+++++ +|||||++++++...+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 457999999999999999999865 68899999998652 22345678899999887 8999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 127 ~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 127 RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 5679999999999999998755 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc---ccHHHHHHHHHhhhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG---MTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~---~~~~~~~~~~~~~~~~~ 936 (1002)
...... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||....... .....+... .
T Consensus 203 ~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~-------~ 273 (396)
T 4dc2_A 203 GLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-------V 273 (396)
T ss_dssp CCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH-------H
T ss_pred cccCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH-------H
Confidence 433222 2345689999999999999999999999999999999999999996532211 111111111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH------HHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA------KEIVTRL 985 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~------~evl~~L 985 (1002)
+....... +...+..+.+++.+||+.||++||++ +|+++|-
T Consensus 274 i~~~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp 320 (396)
T 4dc2_A 274 ILEKQIRI--------PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 320 (396)
T ss_dssp HHHCCCCC--------CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred HhccccCC--------CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence 11111111 11234568899999999999999995 6888774
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=384.88 Aligned_cols=259 Identities=24% Similarity=0.412 Sum_probs=211.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++... ..++|
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~-----~~~lv 260 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-----PIYII 260 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----SCEEE
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCC-----ccEEE
Confidence 45688889999999999999999888999999998653 3467899999999999999999999998633 35799
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++..... .+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 999999999999986532 5888999999999999999999 899999999999999999999999999999876532
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .......+|..|+|||++....++.++|||||||++|||++ |+.||...... +.... +..+..
T Consensus 338 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~--------i~~~~~ 403 (454)
T 1qcf_A 338 EY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRA--------LERGYR 403 (454)
T ss_dssp HH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHH--------HHHTCC
T ss_pred ce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHH--------HHcCCC
Confidence 21 11234457888999999988899999999999999999999 99999763221 11111 111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
. ..+..++..+.++|.+||+.+|++|||+.++++.|+.+.....
T Consensus 404 ~-------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 404 M-------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred C-------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 0 0122356779999999999999999999999999999875443
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=367.85 Aligned_cols=254 Identities=20% Similarity=0.336 Sum_probs=206.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~ 103 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES----FH 103 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----EE
Confidence 457999999999999999999865 68999999997542 334567889999999999999999999998776 55
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC---CcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN---MVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DfGla~ 858 (1002)
++||||+++|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.+ +.+||+|||++.
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 104 YLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 79999999999999987654 4899999999999999999999 8999999999999999764 459999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ...... +.
T Consensus 180 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-----~~~~~~--------i~ 243 (362)
T 2bdw_A 180 EVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYAQ--------IK 243 (362)
T ss_dssp CCTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HH
T ss_pred EecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHH--------HH
Confidence 7654332 2346799999999999998999999999999999999999999975321 111111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+....... ....++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 244 ~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 244 AGAYDYPSP----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp HTCCCCCTT----GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred hCCCCCCcc----cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 111110000 01224567889999999999999999999998854
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=364.18 Aligned_cols=259 Identities=27% Similarity=0.448 Sum_probs=212.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-- 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence 45788999999999999999975 245889999997643 344577889999999999999999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCC-----------------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNY-----------------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHC 834 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~-----------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHr 834 (1002)
..++||||+++|+|.+++..... .+++..++.++.||++||+||| +++|+||
T Consensus 100 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 174 (314)
T 2ivs_A 100 --PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHR 174 (314)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred --ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCccc
Confidence 56799999999999999976432 3789999999999999999999 8999999
Q ss_pred cCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCc
Q 037042 835 DLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTN 913 (1002)
Q Consensus 835 Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~ 913 (1002)
||||+||+++.++.+||+|||+++...............+|+.|+|||+..+..++.++||||+||++|||++ |+.||.
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987765544444455567889999999988889999999999999999999 999997
Q ss_pred ccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 914 EIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... ....+. ...... .+..++..+.+++.+||+.+|++||++.|++++|+++-.
T Consensus 255 ~~~~~~--~~~~~~-----------~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 255 GIPPER--LFNLLK-----------TGHRME-------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp TCCGGG--HHHHHH-----------TTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHHH--HHHHhh-----------cCCcCC-------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 643221 111100 000000 012245678999999999999999999999999998754
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=358.61 Aligned_cols=276 Identities=21% Similarity=0.281 Sum_probs=212.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...... ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 85 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR--HKV 85 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC--CEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCc--eEE
Confidence 356899999999999999999865 58999999997543 23457788999999999999999999998765422 346
Q ss_pred HhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee----CCCCcEEEecccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAHLSDFGI 856 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGl 856 (1002)
+||||+++|+|.+++..... .+++..++.++.||++||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 99999999999999987543 3899999999999999999999 8999999999999999 7888999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccC--------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGS--------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
++........ ....||..|+|||++. +..++.++|||||||++|||++|+.||.......... +.+..
T Consensus 163 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~ 238 (319)
T 4euu_A 163 ARELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYK 238 (319)
T ss_dssp CEECCTTCCB---CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH-HHHHH
T ss_pred ceecCCCCce---eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH-HHHHH
Confidence 9877654322 3456899999999865 5678999999999999999999999997543332222 22221
Q ss_pred HHhhh----hhhccc---CccCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 929 WLLIS----IMKIVD---GSLLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 929 ~~~~~----~~~i~~---~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
..... +..+.. ..... ...............+.+++.+||+.||++|||++|+++|.....
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 11111 111100 00000 000011123456788999999999999999999999999987543
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=370.60 Aligned_cols=254 Identities=20% Similarity=0.282 Sum_probs=204.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---- 99 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG---- 99 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----
Confidence 46899999999999999999864 68999999986431 123577899999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEec
Q 037042 780 FKALALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLSD 853 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~D 853 (1002)
..++||||+++|+|.+++... +..+++..+..++.||++||+||| +++|+||||||+||+++.++. +||+|
T Consensus 100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~D 176 (351)
T 3c0i_A 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGG 176 (351)
T ss_dssp EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECC
T ss_pred EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEec
Confidence 567999999999998887653 225889999999999999999999 899999999999999986554 99999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++....... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ....
T Consensus 177 fg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~------ 242 (351)
T 3c0i_A 177 FGVAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RLFE------ 242 (351)
T ss_dssp CTTCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------HHHH------
T ss_pred CcceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------HHHH------
Confidence 999987765332 22455799999999999998999999999999999999999999976321 1111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+......... .....++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 243 --~i~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~ 289 (351)
T 3c0i_A 243 --GIIKGKYKMNP----RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPW 289 (351)
T ss_dssp --HHHHTCCCCCH----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred --HHHcCCCCCCc----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChh
Confidence 11111111110 011234567899999999999999999999998743
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-40 Score=367.59 Aligned_cols=251 Identities=21% Similarity=0.301 Sum_probs=204.2
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
...++|+..+.||+|+||.||+|+.. +|+.||||++++.. ......+..|.++++.+ +||||+++++++...+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~-- 91 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE-- 91 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--
Confidence 34578999999999999999999865 68999999997642 23456678899999887 8999999999998776
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 92 --~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 92 --NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp --EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 5689999999999999998754 4899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
+....... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...... +... .+
T Consensus 166 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~--------~i 230 (345)
T 1xjd_A 166 KENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-----ELFH--------SI 230 (345)
T ss_dssp BCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HH
T ss_pred hhcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-----HHHH--------HH
Confidence 86433221 224567999999999999999999999999999999999999999753221 1111 11
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH-HHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAK-EIVTR 984 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~-evl~~ 984 (1002)
....... +...+..+.+++.+||..+|++||++. |+++|
T Consensus 231 ~~~~~~~--------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 231 RMDNPFY--------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHCCCCC--------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HhCCCCC--------CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1111111 112345688999999999999999998 77765
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-40 Score=368.59 Aligned_cols=262 Identities=23% Similarity=0.367 Sum_probs=209.3
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG- 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC-
Confidence 46789999999999999999985 246689999997542 33457889999999999 8999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCC----------------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNY----------------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHC 834 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHr 834 (1002)
..++||||+++|+|.+++..... .+++..++.++.||++||+||| +++|+||
T Consensus 123 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 196 (344)
T 1rjb_A 123 ---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHR 196 (344)
T ss_dssp ---SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred ---ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 56799999999999999986542 3788999999999999999999 8999999
Q ss_pred cCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCc
Q 037042 835 DLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTN 913 (1002)
Q Consensus 835 Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~ 913 (1002)
||||+||+++.++.+||+|||++................||+.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 9999999999999999999999987765544334445567889999999888899999999999999999998 999997
Q ss_pred ccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 914 EIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
....... ....+ ....... .+..++..+.+++.+||..+|++|||+.|++++|+.+....
T Consensus 277 ~~~~~~~-~~~~~------------~~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 277 GIPVDAN-FYKLI------------QNGFKMD------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp TCCCSHH-HHHHH------------HTTCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cCCcHHH-HHHHH------------hcCCCCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 6432211 11110 0000000 01123467899999999999999999999999999887543
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=357.52 Aligned_cols=258 Identities=24% Similarity=0.361 Sum_probs=201.1
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..+.||+|+||+||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++... .++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNP------VCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTT------TEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC------cEEEE
Confidence 46888999999999999999875 789999998653 3457789999999999999999999987632 47999
Q ss_pred ccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc-EEEecccccccccC
Q 037042 786 EYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV-AHLSDFGITKLLTR 862 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~-~kl~DfGla~~~~~ 862 (1002)
||+++|+|.+++...+. .+++..++.++.|+++||+|||..+.++|+||||||+||+++.++. +||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999987653 4788899999999999999999433389999999999999988876 79999999976543
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... +.....
T Consensus 159 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~--------~~~~~~ 222 (307)
T 2eva_A 159 HM-----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---RIMWA--------VHNGTR 222 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---HHHHH--------HHTTCC
T ss_pred cc-----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---HHHHH--------HhcCCC
Confidence 21 234689999999999998999999999999999999999999975432211 11000 000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
.. ....++..+.+++.+||+.+|++|||+.|++++|+.+.......
T Consensus 223 ~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 223 PP-------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp CC-------CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred CC-------cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 00 01123456889999999999999999999999999988665443
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=368.76 Aligned_cols=250 Identities=20% Similarity=0.295 Sum_probs=199.9
Q ss_pred CCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 710 ENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
..+.||+|+||.||+|+. .+|+.||+|+++.......+.+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~----~~~lv~E~~ 168 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN----DIVLVMEYV 168 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----EEEEEEECC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC----EEEEEEeCC
Confidence 356899999999999985 469999999998765556778999999999999999999999998776 467999999
Q ss_pred CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee--CCCCcEEEecccccccccCCCce
Q 037042 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL--GDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 789 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl--~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
++|+|.+++......+++..+..++.||++||+||| +.+|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~- 244 (373)
T 2x4f_A 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK- 244 (373)
T ss_dssp TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-
Confidence 999999999876667999999999999999999999 8999999999999999 6778999999999987765432
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .+.........
T Consensus 245 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----~~~~--------~i~~~~~~~~~ 309 (373)
T 2x4f_A 245 --LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-----ETLN--------NILACRWDLED 309 (373)
T ss_dssp --CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHHTCCCSCS
T ss_pred --cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHhccCCCCh
Confidence 23456999999999999889999999999999999999999999763221 1111 11111110000
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. .....+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 310 ~----~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~ 345 (373)
T 2x4f_A 310 E----EFQDISEEAKEFISKLLIKEKSWRISASEALKHPW 345 (373)
T ss_dssp G----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred h----hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcC
Confidence 0 01123567899999999999999999999998643
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=357.13 Aligned_cols=261 Identities=25% Similarity=0.386 Sum_probs=196.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. ..||||+++... ....+.+.+|++++++++||||+++++++.... .+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 95 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-----LA 95 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----CE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCc-----cE
Confidence 467999999999999999999865 359999987543 344577899999999999999999999775443 46
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999999999877777999999999999999999999 89999999999999999999999999999986654
Q ss_pred CCceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...........||+.|+|||++. +..++.++||||+||++|||++|+.||....... ........... .
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~----~ 244 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----QIIEMVGRGSL----S 244 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH----HHHHHHHHTSC----C
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH----HHHHHhccccc----C
Confidence 33322334557899999999876 5678999999999999999999999997643221 11111111100 0
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..... ....++..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 245 ~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PDLSK-------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCTTS-------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cchhh-------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00000 012345679999999999999999999999999998864
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-40 Score=362.85 Aligned_cols=262 Identities=24% Similarity=0.386 Sum_probs=213.5
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeecccc-hhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 45789999999999999999974 3578899999976543 3457789999999999 9999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCC-----------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNY-----------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
..++||||+++|+|.+++..... .+++..++.++.||++||+||| +++|+||||||+
T Consensus 101 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~ 174 (313)
T 1t46_A 101 ---PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAAR 174 (313)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred ---CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccc
Confidence 55799999999999999976542 4899999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 99999999999999999987765544333445567889999999888899999999999999999999 99998764322
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.. ...... ...... .+..++..+.+++.+||+.+|++|||+.|++++|+++-...
T Consensus 255 ~~-~~~~~~--------~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 255 SK-FYKMIK--------EGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HH-HHHHHH--------HTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred hH-HHHHhc--------cCCCCC----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 11 111100 000000 01123467899999999999999999999999999886543
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=378.52 Aligned_cols=329 Identities=22% Similarity=0.227 Sum_probs=268.6
Q ss_pred CccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCC
Q 037042 272 PNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYL 351 (1002)
Q Consensus 272 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L 351 (1002)
++++.|+|++|++++..|..|.++++|++|+|++|.|+++.|..|+++++|++|+|++|+++.++.. .|.++++|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L 106 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG-----VFTGLSNL 106 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT-----SSTTCTTC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc-----cccCCCCC
Confidence 4677777788888777777888888888888888888888788888888888888888888877654 26667777
Q ss_pred cEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEcc
Q 037042 352 EFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431 (1002)
Q Consensus 352 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 431 (1002)
++|+|++|.+.+ ..|..|..+++|++|+|++|++++..+..|.++++|+.|+|+
T Consensus 107 ~~L~Ls~n~i~~--------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 160 (477)
T 2id5_A 107 TKLDISENKIVI--------------------------LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLE 160 (477)
T ss_dssp CEEECTTSCCCE--------------------------ECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEE
T ss_pred CEEECCCCcccc--------------------------CChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECC
Confidence 777777666543 345677888888888888888888888888888889999999
Q ss_pred CCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCC
Q 037042 432 DNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511 (1002)
Q Consensus 432 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 511 (1002)
+|++++..+..+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|+.|++++|++++..
T Consensus 161 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 240 (477)
T 2id5_A 161 KCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP 240 (477)
T ss_dssp SCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCC
T ss_pred CCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccC
Confidence 88888776677888888999999999888888888888899999999988877777776666678999999999998766
Q ss_pred cccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC
Q 037042 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS 591 (1002)
Q Consensus 512 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 591 (1002)
+..+..+++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..++
T Consensus 241 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 320 (477)
T 2id5_A 241 YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG 320 (477)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGG
T ss_pred HHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCc
Confidence 67788999999999999999988888899999999999999999988899999999999999999999987777888999
Q ss_pred ccceeeCCCCcCcccCCCCCCCCCCccccccCCCCCCCCC
Q 037042 592 YLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631 (1002)
Q Consensus 592 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 631 (1002)
+|+.|+|++|+|++..+....+.......+.++...|..|
T Consensus 321 ~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 321 NLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp GCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred ccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 9999999999998876543322223334566777777655
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-40 Score=357.64 Aligned_cols=270 Identities=20% Similarity=0.231 Sum_probs=202.6
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||+|+||+||+|+..+|+.||||++.... ......+.+|++++++++||||+++++++...+ ..++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~l 77 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK----RLVL 77 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS----CEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC----eEEE
Confidence 4688999999999999999998889999999986543 223467889999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++ +|.+++......+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 78 VFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp EEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 9999976 999999876667899999999999999999999 899999999999999999999999999999876533
Q ss_pred CceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh---hhhc--
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS---IMKI-- 937 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~i-- 937 (1002)
.. ......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .+........... ...+
T Consensus 154 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 154 VR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGG
T ss_pred cc--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhc
Confidence 21 22345689999999988664 58999999999999999999999997642211 1111111100000 0000
Q ss_pred ---ccCccCChh-hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 ---VDGSLLSRE-DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ---~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.++...... ..........+..+.+++.+||+.||++|||++|+++|-+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 283 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 000000000 0000011224567889999999999999999999998743
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=364.55 Aligned_cols=262 Identities=20% Similarity=0.208 Sum_probs=209.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++..++ ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~----~~~ 81 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK----YNA 81 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT----EEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC----ccE
Confidence 46799999999999999999985 5799999999875432 24578899999999 9999999999998766 557
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc-----EEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV-----AHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~-----~kl~DfGla 857 (1002)
+||||+ +++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 999999 99999999876667999999999999999999999 889999999999999998887 999999999
Q ss_pred ccccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 858 KLLTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 858 ~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
+.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~~~ 235 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TLKERYQKIGDT 235 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SHHHHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cHHHHHHHHHhh
Confidence 8765433211 124567999999999999999999999999999999999999999874322 121111111000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
... ... ......++ .+.+++.+||+.+|.+||++.++.+.|+++..
T Consensus 236 ~~~--------~~~---~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 236 KRA--------TPI---EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp HHH--------SCH---HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred hcc--------CCH---HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 000 000 00011133 79999999999999999999999999988764
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=355.22 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=197.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|+.. .+..||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 88 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC-----
Confidence 457889999999999999999864 25679999987543 33457788999999999999999999998543
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccc
Confidence 346999999999999999877667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||....... ... .+.
T Consensus 166 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~-----------~i~ 231 (281)
T 1mp8_A 166 MEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIG-----------RIE 231 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH-----------HHH
T ss_pred cCccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHH-----------HHH
Confidence 6543321 2233456788999999988899999999999999999997 999997643221 111 111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++|||+.|++++|+++.+
T Consensus 232 ~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 232 NGERLP-------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp TTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCC-------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111000 112345678899999999999999999999999998754
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=353.42 Aligned_cols=251 Identities=26% Similarity=0.410 Sum_probs=193.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||+||+|+.. |+.||||++.... ....+.+.+|+++++.++||||+++++++...+ .
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 80 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP----N 80 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC------
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC----c
Confidence 357889999999999999999875 8899999986542 223567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC---cEEccCCCCCeeeCC--------CCcE
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP---VIHCDLKPSNVLLGD--------NMVA 849 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~---iiHrDlkp~NILl~~--------~~~~ 849 (1002)
.++||||+++++|.+++... .+++..+..++.|+++|++||| +++ |+||||||+||+++. ++.+
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 81 LCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp CEEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred eEEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcce
Confidence 68999999999999998643 5899999999999999999999 666 999999999999986 7789
Q ss_pred EEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH
Q 037042 850 HLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
||+|||+++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ..
T Consensus 156 kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----~~-- 224 (271)
T 3dtc_A 156 KITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-----AY-- 224 (271)
T ss_dssp EECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-----HH--
T ss_pred EEccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HH--
Confidence 9999999986654322 245689999999999888899999999999999999999999976422111 00
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
.+........ .+..++..+.+++.+||+.+|++|||+.|++++|+++
T Consensus 225 ------~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 225 ------GVAMNKLALP------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ------HHHTSCCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ------hhhcCCCCCC------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0000100000 1123456789999999999999999999999999864
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=357.06 Aligned_cols=271 Identities=21% Similarity=0.224 Sum_probs=204.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++..++ ..+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~ 77 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK----KLT 77 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----EEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC----EEE
Confidence 46889999999999999999865 68999999997543 334577889999999999999999999998766 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++ ++.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 78 lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 78 LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 99999976 676666665567999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh------hh
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS------IM 935 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------~~ 935 (1002)
... ......||+.|+|||++.+.. ++.++||||+||++|||++|..||.........+........... ..
T Consensus 154 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 154 PVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred ccc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhc
Confidence 322 224557899999999987765 899999999999999999998886543222222222221111000 00
Q ss_pred hcccCccCC--h-hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIVDGSLLS--R-EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~~~~~~--~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+..+..... . ...........+..+.+++.+|++.||++|||++|+++|-+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 285 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence 000000000 0 00000011224567889999999999999999999998743
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=353.00 Aligned_cols=258 Identities=29% Similarity=0.441 Sum_probs=212.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 81 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLV 81 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----SCEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----CeEEE
Confidence 356888999999999999999988889999999986543 3467899999999999999999999998766 56799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc
Confidence 9999999999999877667899999999999999999999 8999999999999999999999999999998764322
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
........+|..|+|||+..+..++.++||||+|+++|||++ |+.||...... ..... +......
T Consensus 159 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~--------i~~~~~~ 224 (267)
T 3t9t_A 159 -YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--------ISTGFRL 224 (267)
T ss_dssp -HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH--------HHTTCCC
T ss_pred -ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-----HHHHH--------HhcCCcC
Confidence 112234567888999999988889999999999999999999 89998763221 11111 1111000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. .+..++..+.+++.+||+.+|++|||+.|++++|+++.+.
T Consensus 225 ~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 225 Y-------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp C-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-------CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0 0112345688999999999999999999999999998753
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=377.87 Aligned_cols=260 Identities=20% Similarity=0.230 Sum_probs=207.2
Q ss_pred HHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCc
Q 037042 700 ELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1002)
++....++|+..+.||+|+||+||+|+.. +++.||+|++.+.. ......+.+|+++++.++|||||++++++...+
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445678999999999999999999865 68999999997532 122345788999999999999999999998776
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
..++||||+++|+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 143 ----~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 143 ----YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp ----EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ----EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccc
Confidence 568999999999999999764 4899999999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCCC----cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEGR----VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
+|+....... ......+||+.|+|||++.+.. |+.++|||||||++|||++|+.||...... ........
T Consensus 214 ~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-----~~~~~i~~ 287 (410)
T 3v8s_A 214 TCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GTYSKIMN 287 (410)
T ss_dssp TCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHT
T ss_pred eeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-----hHHHHHHh
Confidence 9987665432 2234568999999999887654 889999999999999999999999753221 11111000
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCC--CCCHHHHHHHHH
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEK--RINAKEIVTRLL 986 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~evl~~L~ 986 (1002)
.. ..+ ..+ .....+..+.+++.+||..+|.+ ||+++|+++|-+
T Consensus 288 ~~-~~~-----~~p------~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 288 HK-NSL-----TFP------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp HH-HHC-----CCC------TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred cc-ccc-----cCC------CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 00 000 000 00123466889999999999998 999999999965
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=367.59 Aligned_cols=258 Identities=24% Similarity=0.406 Sum_probs=204.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcE----EEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGME----VAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.++|+..+.||+|+||+||+|++. +++. ||+|++.... ......+.+|+.++++++||||+++++++....
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--- 88 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS--- 88 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSS---
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCc---
Confidence 357889999999999999999854 4544 7788775432 233456778999999999999999999986443
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++||||+++|+|.+++...+..+++..+..++.||++||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 89 --~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 --LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp --EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred --cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCccc
Confidence 46999999999999999877667899999999999999999999 8899999999999999999999999999999
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
...............+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ....+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~---------- 231 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLE---------- 231 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHH----------
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHH----------
Confidence 8765544434455678889999999988899999999999999999999 999997643221 111100
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||..+|++|||+.|++++|+++..
T Consensus 232 -~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 232 -KGERLA-------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -TTCBCC-------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -cCCCCC-------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 000000 011133457889999999999999999999999998753
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=362.17 Aligned_cols=256 Identities=20% Similarity=0.271 Sum_probs=204.3
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+.+|+.+++++ +||||+++++++...+ .
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~----~ 84 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----R 84 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----E
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC----E
Confidence 56899999999999999999865 68999999998642 23456788899999988 8999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 85 LFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 689999999999999997654 4899999999999999999999 899999999999999999999999999999864
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc---cHHHHHHHHHhhhhhhc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM---TLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~---~~~~~~~~~~~~~~~~i 937 (1002)
..... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||........ ........ .+
T Consensus 161 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-------~i 231 (345)
T 3a8x_A 161 LRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-------VI 231 (345)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH-------HH
T ss_pred cCCCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH-------HH
Confidence 33221 22456799999999999999999999999999999999999999975322111 00111100 11
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH------HHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA------KEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~------~evl~~L~ 986 (1002)
....... +...+..+.+++.+||+.||++||++ .|+++|-.
T Consensus 232 ~~~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~ 278 (345)
T 3a8x_A 232 LEKQIRI--------PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278 (345)
T ss_dssp HHCCCCC--------CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred HcCCCCC--------CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence 1111111 11234568899999999999999995 78887743
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=378.76 Aligned_cols=254 Identities=28% Similarity=0.423 Sum_probs=208.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++. |+.||||+++... ..+.+.+|+++|++++||||+++++++...+. ..++|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS---CEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC---ceEEE
Confidence 457888899999999999999886 7899999997653 45788999999999999999999999865431 34799
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++...+. .+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 999999999999987654 4689999999999999999999 899999999999999999999999999999854432
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
. ....+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..+..
T Consensus 343 ~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~-----------~i~~~~~ 404 (450)
T 1k9a_A 343 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP-----------RVEKGYK 404 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHH-----------HHHTTCC
T ss_pred c-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH-----------HHHcCCC
Confidence 1 22356888999999999999999999999999999998 999997643221 111 1111110
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
. ..+..++..+.++|.+||+.+|++|||+.++++.|+++...+
T Consensus 405 ~-------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 405 M-------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred C-------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 0 112345678999999999999999999999999999998654
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=356.07 Aligned_cols=264 Identities=14% Similarity=0.130 Sum_probs=211.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++.... ..+.+.+|+++++++ +|+||+++++++.... ..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~----~~~ 82 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL----HNV 82 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT----EEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc----eeE
Confidence 45799999999999999999985 579999999987543 234578899999999 7999999999987766 557
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc-----EEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV-----AHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~-----~kl~DfGla 857 (1002)
+||||+ +++|.+++...+..+++..+..++.||++||+||| +++|+||||||+||+++.++. +||+|||++
T Consensus 83 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 999999 99999999877667999999999999999999999 999999999999999987776 999999999
Q ss_pred ccccCCCce-----eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 858 KLLTREDQF-----VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 858 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
+........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~ 236 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYERIGEK 236 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHHHHHhh
Confidence 877554321 122455799999999999999999999999999999999999999977432211 1111100000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
... .. .......++..+.+++.+||+.+|++||+++++++.|+++...
T Consensus 237 ~~~--------~~---~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 237 KQS--------TP---LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHH--------SC---HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccC--------cc---HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 000 00 0001123456799999999999999999999999999998754
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=357.17 Aligned_cols=254 Identities=23% Similarity=0.274 Sum_probs=198.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--------------------------hhHHHHHHHHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--------------------------RAFKSFDVECEVMK 757 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 757 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467999999999999999999854 689999999875421 12356889999999
Q ss_pred hccCCCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCC
Q 037042 758 SIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLK 837 (1002)
Q Consensus 758 ~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlk 837 (1002)
+++||||+++++++...... ..++||||+++|+|.+++... .+++..+..++.||++||+||| +.+|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNED--HLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSS--EEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCC--EEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 99999999999998763211 457999999999999876443 5899999999999999999999 8899999999
Q ss_pred CCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCC---cCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 838 PSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR---VSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 838 p~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
|+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred HHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999987765432 224567999999999987655 47889999999999999999999975
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... ..+...... ....... ...++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 243 ~~~-----~~~~~~~~~--------~~~~~~~------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~ 295 (298)
T 2zv2_A 243 ERI-----MCLHSKIKS--------QALEFPD------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295 (298)
T ss_dssp SSH-----HHHHHHHHH--------CCCCCCS------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred ccH-----HHHHHHHhc--------ccCCCCC------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence 321 111111110 0000000 0123456889999999999999999999998743
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=364.48 Aligned_cols=248 Identities=20% Similarity=0.218 Sum_probs=206.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++.+.. ....+.+.+|++++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~ 115 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----N 115 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC----E
Confidence 357899999999999999999865 69999999997542 234567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++..
T Consensus 116 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~ 191 (350)
T 1rdq_E 116 LYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceec
Confidence 689999999999999998754 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ...+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+... .+..+
T Consensus 192 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~--------~i~~~ 253 (350)
T 1rdq_E 192 KGRT-----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIYE--------KIVSG 253 (350)
T ss_dssp SSCB-----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHHC
T ss_pred cCCc-----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHHHH--------HHHcC
Confidence 5432 345689999999999999999999999999999999999999975321 11111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L~ 986 (1002)
.... +...+..+.+++.+||+.||.+||+ ++|+++|-+
T Consensus 254 ~~~~--------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 254 KVRF--------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp CCCC--------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CCCC--------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 1111 1123466889999999999999998 999998754
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=364.19 Aligned_cols=250 Identities=22% Similarity=0.301 Sum_probs=202.8
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|++++++++|||||++++++...+ ..
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----~~ 90 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE----DM 90 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----EE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----EE
Confidence 57999999999999999999865 68899999997542 234567889999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 91 FMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 79999999999999998654 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
.... ....+||+.|+|||++.. ..|+.++||||+||++|||++|+.||...... ...........
T Consensus 167 ~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~~~~~------- 234 (384)
T 4fr4_A 167 RETQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVHTFET------- 234 (384)
T ss_dssp TTCC---BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHHHHHH-------
T ss_pred CCCc---eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhh-------
Confidence 4332 245679999999998863 45899999999999999999999999753222 11111111100
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-HHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-AKEIVTR 984 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-~~evl~~ 984 (1002)
..... +...+..+.+++.+||+.+|++||+ ++++.+|
T Consensus 235 -~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 235 -TVVTY--------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp -CCCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred -cccCC--------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 00000 1123467899999999999999998 7777664
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=370.04 Aligned_cols=277 Identities=16% Similarity=0.199 Sum_probs=206.4
Q ss_pred hcCCCCCceeecc--CcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRG--GFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|++.+.||+| +||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 99 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN---- 99 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC----
Confidence 4579999999999 99999999865 79999999997543 334577888999999999999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||.+.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~ 176 (389)
T 3gni_B 100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNL 176 (389)
T ss_dssp EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccce
Confidence 5689999999999999997652 35899999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCce-----eeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 859 LLTREDQF-----VTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 859 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
........ .......||..|+|||++.+ ..|+.++||||+||++|||++|+.||......... .........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~ 255 (389)
T 3gni_B 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLNGTVP 255 (389)
T ss_dssp ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC------
T ss_pred eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHhcCCCC
Confidence 65332211 11233478999999999877 57999999999999999999999999764332211 110000000
Q ss_pred ----------hh-------------hhhcc---cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH-
Q 037042 932 ----------IS-------------IMKIV---DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR- 984 (1002)
Q Consensus 932 ----------~~-------------~~~i~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~- 984 (1002)
.. ..... ..............+...+..+.+++.+||+.||++|||+.|+++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp 335 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS 335 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSG
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCH
Confidence 00 00000 0000000000011223345679999999999999999999999988
Q ss_pred -HHhhc
Q 037042 985 -LLKIN 989 (1002)
Q Consensus 985 -L~~i~ 989 (1002)
+++++
T Consensus 336 ~f~~~~ 341 (389)
T 3gni_B 336 FFKQIK 341 (389)
T ss_dssp GGGGC-
T ss_pred HHHHHh
Confidence 44443
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=364.60 Aligned_cols=286 Identities=23% Similarity=0.263 Sum_probs=202.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHH--HHhccCCCcceeeeEEecCch-hhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEV--MKSIRHRNIIKIISCCSIGDF-KALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~-~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+. +++.||||++.... ...+..|.++ ++.++||||+++++++..... .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46799999999999999999976 58999999997543 2333444444 555899999999986543211 11134
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC---------CcEEccCCCCCeeeCCCCcEEEe
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST---------PVIHCDLKPSNVLLGDNMVAHLS 852 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~---------~iiHrDlkp~NILl~~~~~~kl~ 852 (1002)
++||||+++|+|.+++.... .++..+..++.||++||+||| +. +|+||||||+|||++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 69999999999999997654 588899999999999999999 77 99999999999999999999999
Q ss_pred cccccccccCCCc------eeeeccCCCCcccccccccCC-------CCcCcccchHHHHHHHHHHHhCCCCCccccccc
Q 037042 853 DFGITKLLTREDQ------FVTQTQTPATIGYMALEYGSE-------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG 919 (1002)
Q Consensus 853 DfGla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~ 919 (1002)
|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987654321 112234579999999999876 457789999999999999999988765432211
Q ss_pred ccHHHHHHHHHh----hhhhhcccCccCChh-hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 920 MTLKHWVNDWLL----ISIMKIVDGSLLSRE-DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 920 ~~~~~~~~~~~~----~~~~~i~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
.....+...... ............... .........++..+.+++.+||+.||++|||++|+++.|+++...+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 100000000000 000000000000000 000001224567899999999999999999999999999999988887
Q ss_pred CCCCC
Q 037042 995 GYPSY 999 (1002)
Q Consensus 995 ~~~~y 999 (1002)
...++
T Consensus 323 ~~~~~ 327 (336)
T 3g2f_A 323 NKSVS 327 (336)
T ss_dssp -----
T ss_pred cccCC
Confidence 76654
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-40 Score=365.90 Aligned_cols=276 Identities=24% Similarity=0.326 Sum_probs=213.7
Q ss_pred cCCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+.. .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ--S 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC--E
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc--e
Confidence 5788999999999999999984 36889999999877666677899999999999999999999988643322 3
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence 46999999999999999876667999999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH-Hhhhhhhcc
Q 037042 861 TREDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW-LLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~-~~~~~~~i~ 938 (1002)
....... ......||..|+|||++.+..++.++|||||||++|||++|+.||.....+......+.... ......+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 5443322 22345688899999999888899999999999999999999999876432210000000000 000011111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
...... ..+..++..+.+++.+||+.+|++|||+.|++++|+++....
T Consensus 258 ~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 258 EEGQRL------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred hcccCC------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 110000 012234567899999999999999999999999999886543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=361.14 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=195.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe----CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||.||+|+. .+|+.||+|++++.. ......+.+|++++++++||||+++++++...+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG- 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence 45799999999999999999986 478999999997642 223456788999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 95 ---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 95 ---KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp ---CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred ---EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 5689999999999999997654 4889999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .
T Consensus 168 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~--------~ 232 (327)
T 3a62_A 168 CKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-----KTID--------K 232 (327)
T ss_dssp C------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHH--------H
T ss_pred ccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-----HHHH--------H
Confidence 976543221 224457999999999999889999999999999999999999999763221 1111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
+....... +...+..+.+++.+||..+|++|| ++.|+++|-+
T Consensus 233 i~~~~~~~--------p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~ 279 (327)
T 3a62_A 233 ILKCKLNL--------PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279 (327)
T ss_dssp HHHTCCCC--------CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred HHhCCCCC--------CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence 11111111 112346688999999999999999 7889998744
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-40 Score=374.68 Aligned_cols=270 Identities=21% Similarity=0.240 Sum_probs=211.2
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEec
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1002)
+.+.....++|+..+.||+|+||+||+|+.. +|+.||||++++.. ......+.+|++++..++||||+++++++..
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3344455688999999999999999999865 79999999997532 2233457889999999999999999999987
Q ss_pred CchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 774 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
.+ ..++||||+++|+|.+++.+.+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 133 ~~----~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 133 EN----YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp SS----EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred CC----EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEee
Confidence 76 568999999999999999876656999999999999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccC-------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGS-------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~ 926 (1002)
||+++........ .....+||+.|+|||++. ...|+.++|||||||++|||++|+.||...... +..
T Consensus 206 FGla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~~ 279 (412)
T 2vd5_A 206 FGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-----ETY 279 (412)
T ss_dssp CTTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHH
T ss_pred chhheeccCCCcc-ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 9999877554322 223468999999999876 456899999999999999999999999763221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCC---CCHHHHHHHHHhhcccCC
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKR---INAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---pt~~evl~~L~~i~~~~~ 993 (1002)
....... .. ...+. .+...+..+.+++.+||. +|++| |+++|+++|-. +++.++
T Consensus 280 ~~i~~~~-~~-----~~~p~-----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf-f~~i~w 336 (412)
T 2vd5_A 280 GKIVHYK-EH-----LSLPL-----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF-FFGLDW 336 (412)
T ss_dssp HHHHTHH-HH-----CCCC---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG-GTTCCS
T ss_pred HHHHhcc-cC-----cCCCc-----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC-cCCCCH
Confidence 1100000 00 00000 012245678999999999 99998 59999999855 333333
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=363.68 Aligned_cols=272 Identities=19% Similarity=0.319 Sum_probs=204.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++||||+++++++.........
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999985 578999999997642 23456788999999999999999999998765532222
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 379999999999999997655 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ... ....
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~--------~~~~ 233 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VAY--------QHVR 233 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHH--------HHHH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHH--------HHhc
Confidence 543322 12234568999999999998899999999999999999999999997632211 110 0111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHH-HHHHhhcccCCCCCC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV-TRLLKINDLDFNGYP 997 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl-~~L~~i~~~~~~~~~ 997 (1002)
...... ......++..+.+++.+||+.||++||++.+++ +.+.++......+.|
T Consensus 234 ~~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~ 288 (311)
T 3ork_A 234 EDPIPP----SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288 (311)
T ss_dssp CCCCCH----HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSC
T ss_pred CCCCCc----ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCC
Confidence 111111 011123456789999999999999999766555 556666655555544
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=363.56 Aligned_cols=251 Identities=21% Similarity=0.262 Sum_probs=204.7
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 778 (1002)
..++|+..+.||+|+||.||+|+.. +|+.||||++++.. ......+..|.++++.+ +||+|+++++++...+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--- 94 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 94 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS---
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC---
Confidence 3468999999999999999999876 48899999997642 23456788899999988 7999999999998776
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++
T Consensus 95 -~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 95 -RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred -EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 5679999999999999998654 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...... +... .+.
T Consensus 170 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~--------~i~ 234 (353)
T 2i0e_A 170 ENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQ--------SIM 234 (353)
T ss_dssp CCCCTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHH
T ss_pred ccccCCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-----HHHH--------HHH
Confidence 6433221 224567999999999999999999999999999999999999999753221 1111 111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRL 985 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L 985 (1002)
...... +...+..+.+++.+||..+|++||+ ++|+++|-
T Consensus 235 ~~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 235 EHNVAY--------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp HCCCCC--------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred hCCCCC--------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 111111 1123467889999999999999995 58888774
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=361.81 Aligned_cols=261 Identities=27% Similarity=0.424 Sum_probs=212.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
.++|+..+.||+|+||+||+|+.. ++..||||++.... ......+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467899999999999999999853 46789999997653 33457788999999999 899999999999876
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccCC---------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSNY---------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
+ ..++||||+++|+|.+++..... .+++..++.++.||++||+||| +.+|+||||||+
T Consensus 114 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~ 186 (334)
T 2pvf_A 114 G----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAAR 186 (334)
T ss_dssp S----CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred C----ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccc
Confidence 6 56799999999999999986542 3889999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~- 265 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV- 265 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-
T ss_pred eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-
Confidence 99999999999999999987765544434445567889999999888889999999999999999999 9999875322
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.+......... ... .+..++..+.+++.+||+.+|++|||+.|++++|+++....
T Consensus 266 ----~~~~~~~~~~~-----~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 266 ----EELFKLLKEGH-----RMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp ----HHHHHHHHHTC-----CCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHhcCC-----CCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11111111000 000 01124467899999999999999999999999999987543
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=358.61 Aligned_cols=247 Identities=22% Similarity=0.250 Sum_probs=196.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..++||+|+||+||+|+.. +|+.||||++.... .........|+..+.++ +||||+++++++..++ ..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~----~~ 132 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG----IL 132 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC----EE
Confidence 56999999999999999999876 79999999986542 22334455566666555 8999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+ +++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++....
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 133 YLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 7999999 66999998887777999999999999999999999 8899999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.... .....||+.|+|||++.+ .++.++|||||||++|||++|..|+..... | ..+....
T Consensus 209 ~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-------~---------~~~~~~~ 268 (311)
T 3p1a_A 209 TAGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-------W---------QQLRQGY 268 (311)
T ss_dssp ---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-------H---------HHHTTTC
T ss_pred cCCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-------H---------HHHhccC
Confidence 4322 234568999999998775 789999999999999999999777644211 0 1111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. . ..+..++..+.+++.+||+++|++|||++|+++|-+
T Consensus 269 ~~-~-----~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 307 (311)
T 3p1a_A 269 LP-P-----EFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPV 307 (311)
T ss_dssp CC-H-----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CC-c-----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcc
Confidence 10 0 112234577999999999999999999999998743
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=379.43 Aligned_cols=258 Identities=24% Similarity=0.430 Sum_probs=204.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++.++..||||+++... ...+.+.+|+++|++++||||+++++++... ..++|
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~iv 256 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYIV 256 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SCEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----ceEEE
Confidence 35688889999999999999999888889999997653 2356789999999999999999999998753 34799
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 99999999999997542 35899999999999999999999 899999999999999999999999999999876543
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .......+|..|+|||++.++.++.++|||||||++|||++ |+.||...... +... .+..+..
T Consensus 334 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~--------~i~~~~~ 399 (452)
T 1fmk_A 334 EY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD--------QVERGYR 399 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH--------HHHTTCC
T ss_pred ce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH--------HHHcCCC
Confidence 22 12234557889999999988899999999999999999999 99999753221 1111 1111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
. ..+..++..+.++|.+||+.+|++|||++++++.|+.+....
T Consensus 400 ~-------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 400 M-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred C-------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 0 012235677899999999999999999999999999886543
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=382.41 Aligned_cols=257 Identities=26% Similarity=0.407 Sum_probs=211.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
..+|+..+.||+|+||+||+|++. ++..||||+++... ...+.+.+|+++|++++||||+++++++...+ ..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC----cEEE
Confidence 346888899999999999999876 48899999997653 34578999999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999999998643 36899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
... .......+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ....+ ...
T Consensus 371 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~~~------------~~~ 435 (495)
T 1opk_A 371 DTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELL------------EKD 435 (495)
T ss_dssp CCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHH------------HTT
T ss_pred Cce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHH------------HcC
Confidence 332 22344567889999999988899999999999999999999 999987643221 11110 000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
... ..+..++..+.++|.+||+.+|++|||+.|+++.|+.+..
T Consensus 436 ~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 436 YRM------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCC------CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 000 0122355778999999999999999999999999998753
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=357.59 Aligned_cols=280 Identities=21% Similarity=0.298 Sum_probs=216.9
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHh--ccCCCcceeeeEEecCc
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKS--IRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~ 775 (1002)
........++|+..+.||+|+||+||+|+.. |+.||||++... ....+.+|+++++. ++||||+++++++....
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 3334445678999999999999999999874 899999998754 34567788888887 68999999999987765
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-----CCCCcEEccCCCCCeeeCCCCcEE
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG-----YSTPVIHCDLKPSNVLLGDNMVAH 850 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~iiHrDlkp~NILl~~~~~~k 850 (1002)
......++||||+++|+|.+++... .+++..++.++.|++.||+|||.. ++.+|+||||||+||+++.++.+|
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred CccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence 3222457999999999999999764 489999999999999999999932 157899999999999999999999
Q ss_pred EecccccccccCCCcee--eeccCCCCcccccccccCCC------CcCcccchHHHHHHHHHHHhC----------CCCC
Q 037042 851 LSDFGITKLLTREDQFV--TQTQTPATIGYMALEYGSEG------RVSTNGDVYNFGVMLMETFTG----------KKPT 912 (1002)
Q Consensus 851 l~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg----------~~P~ 912 (1002)
|+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 99999998776544322 22445799999999988765 344789999999999999999 7788
Q ss_pred cccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 913 NEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
............+....... ...+... ......++...+.+++.+||+.+|++|||+.|++++|+++.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 268 YDLVPSDPSVEEMRKVVCEQ----KLRPNIP-----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTSCSSCCHHHHHHHHTTS----CCCCCCC-----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cccCcCcccHHHHHHHHHHH----HhCCCCc-----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 76544433333333221111 1111111 11123456788999999999999999999999999999997653
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=361.01 Aligned_cols=255 Identities=22% Similarity=0.315 Sum_probs=200.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh----
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA---- 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~---- 778 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356899999999999999999875 79999999997543 345678999999999999999999999986643210
Q ss_pred -------------------------------------------------HHHHHhhccCCCCChhHhhhccCC--cCCHH
Q 037042 779 -------------------------------------------------LFKALALEYMPHGSLEKYLYSSNY--ILDIF 807 (1002)
Q Consensus 779 -------------------------------------------------~~~~lv~e~~~~g~L~~~l~~~~~--~l~~~ 807 (1002)
.+.++||||+++|+|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 014699999999999999987543 45667
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce----------eeeccCCCCcc
Q 037042 808 QRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF----------VTQTQTPATIG 877 (1002)
Q Consensus 808 ~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~----------~~~~~~~gt~~ 877 (1002)
.++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 899999999999999999999999999999877654221 12234579999
Q ss_pred cccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHH
Q 037042 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCM 957 (1002)
Q Consensus 878 y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 957 (1002)
|+|||++.+..++.++||||+||++|||++|..|+..... . ...+..... + .......
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-------~--------~~~~~~~~~--~-----~~~~~~~ 299 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-------I--------ITDVRNLKF--P-----LLFTQKY 299 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-------H--------HHHHHTTCC--C-----HHHHHHC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-------H--------HHHhhccCC--C-----cccccCC
Confidence 9999999988999999999999999999999877533110 0 001111110 0 0122344
Q ss_pred HHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 958 SFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 958 ~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..+.+++.+||+.||++|||+.|+++|
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 667899999999999999999999986
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=361.59 Aligned_cols=271 Identities=23% Similarity=0.378 Sum_probs=215.4
Q ss_pred cCHHHHHHhhcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeecccc-hhHHHHHHHHHHHHhc-cCCCccee
Q 037042 696 FSYLELCQATDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNIIKI 767 (1002)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~ 767 (1002)
+...+.....++|+..+.||+|+||+||+|++ .+++.||||++..... .....+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 33444444567899999999999999999974 3568899999976533 3456788999999999 79999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHhhhccCC---------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcE
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY---------------ILDIFQRLNIMIDVASALEYLYFGYSTPVI 832 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ii 832 (1002)
++++...+. ..++||||+++|+|.+++..... .+++..+..++.|+++||+||| +.+|+
T Consensus 97 ~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~ 170 (316)
T 2xir_A 97 LGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCI 170 (316)
T ss_dssp EEEECCTTS---CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred EEEEecCCC---ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 999876431 35799999999999999987543 2789999999999999999999 89999
Q ss_pred EccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCC
Q 037042 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911 (1002)
Q Consensus 833 HrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P 911 (1002)
||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p 250 (316)
T 2xir_A 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250 (316)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999987755444334445567889999999988899999999999999999998 9999
Q ss_pred CcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 912 TNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
|........ ........ .... .+..++..+.+++.+||+.+|.+|||+.|++++|+++...
T Consensus 251 ~~~~~~~~~----~~~~~~~~--------~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 251 YPGVKIDEE----FCRRLKEG--------TRMR-------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp STTCCCSHH----HHHHHHHT--------CCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcccchhHH----HHHHhccC--------ccCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 976432211 11110000 0000 0112345688999999999999999999999999988654
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=360.74 Aligned_cols=277 Identities=22% Similarity=0.359 Sum_probs=212.5
Q ss_pred CCCCceeeccCcceEEEEEeC-----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
|+..+.||+|+||+||++.+. +++.||||++.... ....+.+.+|++++++++||||+++++++...+.. ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~ 110 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA--SL 110 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT--EE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc--eE
Confidence 488899999999999998643 58899999998653 34467789999999999999999999999875322 34
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++.... +++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 69999999999999997654 899999999999999999999 8999999999999999999999999999998876
Q ss_pred CCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH-HHHHhhhhhhccc
Q 037042 862 REDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV-NDWLLISIMKIVD 939 (1002)
Q Consensus 862 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~-~~~~~~~~~~i~~ 939 (1002)
...... ......+|..|+|||++.+..++.++||||+||++|||++|+.||............+. .........+...
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 543322 23445688889999999888899999999999999999999999876432211000000 0000001111111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCCC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGYP 997 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~~ 997 (1002)
...... .+..++..+.+++.+||+.+|++|||+.|+++.|+++.+......|
T Consensus 266 ~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~p 317 (318)
T 3lxp_A 266 RGERLP------RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAP 317 (318)
T ss_dssp TTCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC---
T ss_pred cccCCC------CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCCC
Confidence 111100 1123456799999999999999999999999999999877665554
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=359.58 Aligned_cols=271 Identities=23% Similarity=0.296 Sum_probs=191.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||+++... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 79 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN----KLT 79 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT----EEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC----eEE
Confidence 467999999999999999999854 68999999997543 234467889999999999999999999998765 567
Q ss_pred HhhccCCCCChhHhhhccC-----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSN-----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
+||||++ |+|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 155 (317)
T 2pmi_A 80 LVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLA 155 (317)
T ss_dssp EEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred EEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccc
Confidence 9999998 59999886542 25889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SI 934 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~ 934 (1002)
+....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ............ ..
T Consensus 156 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 156 RAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESL 232 (317)
T ss_dssp EETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTT
T ss_pred eecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhH
Confidence 87654322 2234578999999998876 468999999999999999999999997643221 111111110000 00
Q ss_pred ----hhcc--cCccC----C--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 ----MKIV--DGSLL----S--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ----~~i~--~~~~~----~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+.. ..... . ........+...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~ 296 (317)
T 2pmi_A 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296 (317)
T ss_dssp CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChh
Confidence 0000 00000 0 000000111224567899999999999999999999998843
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=359.91 Aligned_cols=271 Identities=21% Similarity=0.246 Sum_probs=210.6
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++..........++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 45799999999999999999986 57999999998776666678899999999999999999999998743222224579
Q ss_pred hhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
||||+++|+|.+++.. .+..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999876 3446899999999999999999999 889999999999999999999999999998765
Q ss_pred cCCCce-------eeeccCCCCcccccccccCCCC---cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 861 TREDQF-------VTQTQTPATIGYMALEYGSEGR---VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 861 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...............
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--- 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ--- 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH---
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh---
Confidence 321110 0012234789999999887554 789999999999999999999999764333222211111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
. ..... ....++..+.+++.+||+.+|.+|||+.|++++|+++........
T Consensus 262 -----~----~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~ 312 (317)
T 2buj_A 262 -----N----QLSIP------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312 (317)
T ss_dssp -----C----C--CC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred -----c----cCCCC------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence 0 00000 011234678999999999999999999999999999987655543
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=363.19 Aligned_cols=263 Identities=24% Similarity=0.441 Sum_probs=212.2
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
..++|+..+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 101 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 101 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS-
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC-
Confidence 4567999999999999999999754 378899999975432 34567889999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC---------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
..++||||+++|+|.+++...+ ..+++..++.++.||+.||+||| +++|+||||||+||+++.++
T Consensus 102 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 102 ---PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTC
T ss_pred ---ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCC
Confidence 5579999999999999997632 24688999999999999999999 88999999999999999999
Q ss_pred cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHH
Q 037042 848 VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~ 926 (1002)
.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... ...
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~ 250 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-----QVL 250 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----HHH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-----HHH
Confidence 999999999987655443333344567889999999988889999999999999999999 88998653221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
.. +....... .+..++..+.+++.+||+.+|++|||+.|++++|+++.....
T Consensus 251 ~~--------~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~ 302 (322)
T 1p4o_A 251 RF--------VMEGGLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302 (322)
T ss_dssp HH--------HHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred HH--------HHcCCcCC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCC
Confidence 11 11111110 012245678999999999999999999999999998765443
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-39 Score=373.41 Aligned_cols=250 Identities=26% Similarity=0.359 Sum_probs=206.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|...+.||+|+||.||+|+.. +|+.||||++.+.. ......+.+|+.+++.++||||+++++++...+ .
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~----~ 90 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS----D 90 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----E
Confidence 357999999999999999999865 79999999997542 234567899999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 91 ~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp EEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 679999999999999997654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ... .++.+
T Consensus 167 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~--------~~i~~ 230 (476)
T 2y94_A 167 SDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLF--------KKICD 230 (476)
T ss_dssp CTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHH--------HHHHT
T ss_pred ccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHH--------HHHhc
Confidence 54432 234579999999999888765 78999999999999999999999763221 111 11112
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+....+ ...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 231 ~~~~~p--------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~ 269 (476)
T 2y94_A 231 GIFYTP--------QYLNPSVISLLKHMLQVDPMKRATIKDIREHEW 269 (476)
T ss_dssp TCCCCC--------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred CCcCCC--------ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHH
Confidence 111111 123456889999999999999999999999855
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=368.05 Aligned_cols=263 Identities=25% Similarity=0.434 Sum_probs=198.8
Q ss_pred CCCCCceeeccCcceEEEEEeC--CC--cEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ--DG--MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.|+..+.||+|+||+||+|++. ++ ..||||+++... ....+.+.+|+.++++++||||+++++++...+. ..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~---~~ 166 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SP 166 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS---CC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC---Ce
Confidence 3666789999999999999853 22 468999987543 3456789999999999999999999998754331 34
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++......+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccc
Confidence 6999999999999999877667899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCce--eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 862 REDQF--VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 862 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
..... .......+|+.|+|||++.+..++.++|||||||++|||++ |.+||....... ....+ .
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~-----------~ 310 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYL-----------L 310 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHH-----------H
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHH-----------H
Confidence 43221 12234567889999999988899999999999999999999 677776532221 11111 1
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
.+.... .+..++..+.+++.+||+.+|++|||+.|++++|+++......+
T Consensus 311 ~~~~~~-------~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 311 QGRRLL-------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp TTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred cCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 111000 11234567899999999999999999999999999988665543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=364.54 Aligned_cols=253 Identities=20% Similarity=0.281 Sum_probs=190.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~l 125 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT----EISL 125 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS----EEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC----eEEE
Confidence 467999999999999999999876 58899999997643 3466788999999999999999999998766 4679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~~ 860 (1002)
||||+++|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 126 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp EECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred EEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 999999999999997654 4899999999999999999999 889999999999999975 899999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .. .+...
T Consensus 202 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~--------~i~~~ 266 (349)
T 2w4o_A 202 EHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM----FR--------RILNC 266 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHH----HH--------HHHTT
T ss_pred Cccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHH----HH--------HHHhC
Confidence 5432 123456899999999999989999999999999999999999999754322111 11 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....... .....+..+.+++.+||..||++|||+.|+++|-+
T Consensus 267 ~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 267 EYYFISP----WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp CCCCCTT----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred CCccCCc----hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 1110000 01224467889999999999999999999999754
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=357.52 Aligned_cols=255 Identities=22% Similarity=0.334 Sum_probs=203.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CC-------cEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DG-------MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 357889999999999999999754 33 579999998766667788999999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc--------
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV-------- 848 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~-------- 848 (1002)
..++||||+++|+|.+++...+..+++..+..++.||++||+||| +++|+||||||+||+++.++.
T Consensus 86 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ---ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp ---CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred ---CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccce
Confidence 457999999999999999887666999999999999999999999 899999999999999988877
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
+||+|||++...... ....||..|+|||++.+ ..++.++|||||||++|||++|..|+........ ...
T Consensus 160 ~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~----~~~ 229 (289)
T 4fvq_A 160 IKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR----KLQ 229 (289)
T ss_dssp EEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HHH
T ss_pred eeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH----HHH
Confidence 999999999765432 12347888999998877 6789999999999999999996655443221111 000
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
... . ..... ...+..+.+++.+||+.+|++|||+.|++++|+++-....
T Consensus 230 ~~~--~-----~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 230 FYE--D-----RHQLP----------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp HHH--T-----TCCCC----------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred Hhh--c-----cCCCC----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 000 0 00000 0113457899999999999999999999999999876443
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=363.69 Aligned_cols=256 Identities=22% Similarity=0.239 Sum_probs=195.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPT----HLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC----EEEE
Confidence 467999999999999999999865 789999999976432 3466889999999999999999999998776 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc--EEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV--AHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~--~kl~DfGla~~~~ 861 (1002)
||||+++|+|.+++...+ .+++..++.++.|+++||+||| +++|+||||||+||+++.++. +||+|||+++...
T Consensus 94 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 94 IMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 999999999999997655 4899999999999999999999 899999999999999987765 9999999997543
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcc-cchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTN-GDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
... ......||+.|+|||++.+..++.+ +||||+||++|||++|+.||........ ....... +...
T Consensus 170 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~--------~~~~ 237 (361)
T 3uc3_A 170 LHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQR--------ILSV 237 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHH--------HHTT
T ss_pred ccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHH--------HhcC
Confidence 322 1234569999999999888777655 8999999999999999999976543322 2222111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
....+. ....+..+.+++.+||+.+|++|||+.|+++|-+-
T Consensus 238 ~~~~~~------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 278 (361)
T 3uc3_A 238 KYSIPD------DIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278 (361)
T ss_dssp CCCCCT------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHH
T ss_pred CCCCCC------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcch
Confidence 111111 01134568899999999999999999999999664
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=361.55 Aligned_cols=258 Identities=26% Similarity=0.418 Sum_probs=201.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcE----EEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGME----VAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.++|+..+.||+|+||+||+|+.. +++. ||+|.+... .....+.+.+|+.++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---
Confidence 357999999999999999999854 4554 577766543 2345678899999999999999999999998764
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++|+||+++|+|.+++...+..+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 91 --~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 --VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp --EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred --ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 35899999999999999887777999999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+.
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~---------- 233 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILE---------- 233 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHH----------
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHH----------
Confidence 7765444334445567889999999999999999999999999999999 999997643321 111110
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 234 -~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 234 -KGERLP-------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -TTCCCC-------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -cCCCCC-------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 000000 012234568899999999999999999999999998863
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=352.36 Aligned_cols=258 Identities=25% Similarity=0.432 Sum_probs=206.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC----CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|++.+ +..||||++.... ....+.+.+|++++++++||||+++++++..+.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP---- 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC----
Confidence 4578899999999999999998542 3469999987653 345678899999999999999999999987544
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++||||+++++|.+++...+..+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 87 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 87 -TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp -CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred -CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 36999999999999999877667899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......+|+.|+|||+..+..++.++|||||||++|||++ |+.||....... ....+.
T Consensus 163 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~----------- 228 (281)
T 3cc6_A 163 IEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLE----------- 228 (281)
T ss_dssp C----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHH-----------
T ss_pred ccccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHh-----------
Confidence 6543321 2234567889999999988889999999999999999998 999997533221 111110
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
...... .+..++..+.+++.+||..+|++|||+.|++++|+++...
T Consensus 229 ~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 229 KGDRLP-------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCC-------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 000000 0112346688999999999999999999999999988653
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=355.72 Aligned_cols=273 Identities=21% Similarity=0.362 Sum_probs=207.9
Q ss_pred cCCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-- 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN-- 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C--
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc--
Confidence 4588899999999999999984 368999999997543 33457889999999999999999999998765322
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred eEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 346999999999999999776667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHH-HHHHHHHhhhhhhc
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLK-HWVNDWLLISIMKI 937 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~-~~~~~~~~~~~~~i 937 (1002)
....... .......||..|+|||++.+..++.++||||+||++|||++|+.|+........... .+........+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 7654432 223455688899999999888999999999999999999999999755321100000 00000000000000
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
....... ..+..++..+.+++.+||+.+|++|||+.|+++.|+++-
T Consensus 256 ~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGKRL------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTCCC------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCCC------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0000000 011234567899999999999999999999999999863
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=348.87 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=205.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. ++.||||++.... ....+.+.+|+.++++++||||+++++++...+.. ..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP--HPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSS--SCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCC--CeE
Confidence 357899999999999999999986 8899999997543 34456789999999999999999999999765211 457
Q ss_pred HhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
+||||+++|+|.+++..... .+++..+..++.||++||+||| +.+ |+||||||+||+++.++.++|+|||++..
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999999987654 5899999999999999999999 778 99999999999999999999999998765
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCc---ccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVST---NGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
... ....||+.|+|||++.+..++. ++|||||||++|||++|+.||....... ....... .
T Consensus 163 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~----~ 226 (271)
T 3kmu_A 163 FQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-----IGMKVAL----E 226 (271)
T ss_dssp TSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-----HHHHHHH----S
T ss_pred ecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-----HHHHHHh----c
Confidence 332 2346889999999987665544 7999999999999999999997632211 1111000 0
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..... .+..++..+.+++.+||+.+|++|||++|+++.|+++++
T Consensus 227 ~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 227 GLRPT----------IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00000 112245678999999999999999999999999999875
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-39 Score=347.54 Aligned_cols=253 Identities=23% Similarity=0.272 Sum_probs=206.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~l 83 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT----DIYL 83 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----EEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----eEEE
Confidence 456999999999999999999865 57899999998765556788999999999999999999999998776 4579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~ 860 (1002)
||||+++++|.+++...+ .+++..+..++.|++.|++||| +++|+||||||+||++ +.++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999999987654 4899999999999999999999 8999999999999999 78899999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .....||+.|+|||++.+ .++.++||||+||++|||++|+.||....... ... .+...
T Consensus 160 ~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~--------~~~~~ 222 (277)
T 3f3z_A 160 KPGKM---MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-----VML--------KIREG 222 (277)
T ss_dssp CTTSC---BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHH--------HHHHC
T ss_pred cCccc---hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH-----HHH--------HHHhC
Confidence 64432 234568999999998765 48999999999999999999999997642211 111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....... ....++..+.+++.+|++.+|++|||+.|+++|-+
T Consensus 223 ~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~ 264 (277)
T 3f3z_A 223 TFTFPEK----DWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 264 (277)
T ss_dssp CCCCCHH----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred CCCCCch----hhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 1111110 01124567899999999999999999999998754
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=365.09 Aligned_cols=279 Identities=23% Similarity=0.237 Sum_probs=210.5
Q ss_pred cccccCHHHHHHhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-----CCCcc
Q 037042 692 TWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-----HRNII 765 (1002)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv 765 (1002)
+...+++.+.....++|++.++||+|+||+||+|+. .+++.||||++... ......+..|+++++.++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 344555556556678999999999999999999986 46899999998743 334566788999999996 99999
Q ss_pred eeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC
Q 037042 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844 (1002)
Q Consensus 766 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~ 844 (1002)
++++++...+ ..++||||+ +++|.+++..... .+++..+..++.||+.||+||| +++|+||||||+|||++
T Consensus 100 ~~~~~~~~~~----~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~ 171 (360)
T 3llt_A 100 KYHGKFMYYD----HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLD 171 (360)
T ss_dssp CEEEEEEETT----EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred cccceeeECC----eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEc
Confidence 9999998776 567999999 8899999987553 5899999999999999999999 89999999999999997
Q ss_pred C-------------------------CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHH
Q 037042 845 D-------------------------NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFG 899 (1002)
Q Consensus 845 ~-------------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG 899 (1002)
. ++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 246 (360)
T 3llt_A 172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFG 246 (360)
T ss_dssp CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHH
T ss_pred cccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHH
Confidence 5 8899999999998654322 345789999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccccccccHHHHH-----------HHHHhhhhhhcccCccC---Chhhh---H---------HHhH
Q 037042 900 VMLMETFTGKKPTNEIFNEGMTLKHWV-----------NDWLLISIMKIVDGSLL---SREDI---Q---------FVAK 953 (1002)
Q Consensus 900 v~l~elltg~~P~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~~~~~~---~~~~~---~---------~~~~ 953 (1002)
|++|||++|+.||....... .+.... ............+.... .+... . ...+
T Consensus 247 ~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 325 (360)
T 3llt_A 247 CVLAELYTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYK 325 (360)
T ss_dssp HHHHHHHHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccc
Confidence 99999999999997632211 011100 00000000000000000 00000 0 0000
Q ss_pred HHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 954 EQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 954 ~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
......+.+++.+||+.||++|||++|+++|-
T Consensus 326 ~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp 357 (360)
T 3llt_A 326 IIKHELFCDFLYSILQIDPTLRPSPAELLKHK 357 (360)
T ss_dssp HCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred cchHHHHHHHHHHHhcCChhhCCCHHHHhcCc
Confidence 11125688999999999999999999999763
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=353.87 Aligned_cols=266 Identities=25% Similarity=0.426 Sum_probs=198.7
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
..++|...+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++...+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567889999999999999999753 35589999987542 33457789999999999999999999998765422
Q ss_pred h-HHHHHhhccCCCCChhHhhhc-----cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 778 A-LFKALALEYMPHGSLEKYLYS-----SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 778 ~-~~~~lv~e~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
. ...++||||+++|+|.+++.. ....+++..++.++.||++||+||| +++|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 1 123789999999999999843 2246899999999999999999999 899999999999999999999999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
+|||+++...............+++.|+|||+..+..++.++|||||||++|||++ |+.||........ ..
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~------ 260 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YD------ 260 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HH------
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HH------
Confidence 99999987755443333344567889999999988899999999999999999999 8889876432211 11
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.+....... .+..++..+.+++.+||..+|++|||+.+++++|+++.+..
T Consensus 261 -----~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 261 -----YLLHGHRLK-------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp -----HHHTTCCCC-------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----HHHcCCCCC-------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 011110000 11234567899999999999999999999999999987543
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=349.16 Aligned_cols=260 Identities=22% Similarity=0.393 Sum_probs=210.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|+..++..||||++.... ...+.+.+|++++++++||||+++++++..+. .++|
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~v 85 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYII 85 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----CEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCC-----cEEE
Confidence 35788899999999999999998888899999997653 23577899999999999999999999986543 4699
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++++|.+++..... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 999999999999976532 5899999999999999999999 899999999999999999999999999999877644
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .......++..|+|||+..+..++.++|||||||++|||++ |+.||...... +.... +..-...
T Consensus 163 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~-----~~~~~~~-- 229 (279)
T 1qpc_A 163 EY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQN-----LERGYRM-- 229 (279)
T ss_dssp CE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHH-----HHTTCCC--
T ss_pred cc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHHH-----HhcccCC--
Confidence 32 22244567888999999988889999999999999999999 99998753221 11111 0000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
. .+..++..+.+++.+||..+|++|||+.++++.|+++......
T Consensus 230 ~--------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 230 V--------RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp C--------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred C--------CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 0 0122446789999999999999999999999999998765443
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=362.66 Aligned_cols=255 Identities=21% Similarity=0.325 Sum_probs=197.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccC--CCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRH--RNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~ 780 (1002)
..+|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|++++++++| |||+++++++.... .
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~----~ 83 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ----Y 83 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----E
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC----E
Confidence 45699999999999999999998889999999987543 3345778999999999986 99999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||| +.+|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+|||++ ++.+||+|||+++..
T Consensus 84 ~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 84 IYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEEEEC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEEEe-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 679999 56889999998754 5899999999999999999999 89999999999999996 678999999999877
Q ss_pred cCCCceeeeccCCCCcccccccccCC-----------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSE-----------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~----- 229 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---K----- 229 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---H-----
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---H-----
Confidence 65443333345679999999998754 6789999999999999999999999975322111 1
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
...+.++...... +...+..+.+++.+||+.||++|||+.|+++|-+-
T Consensus 230 ----~~~~~~~~~~~~~------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~ 277 (343)
T 3dbq_A 230 ----LHAIIDPNHEIEF------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277 (343)
T ss_dssp ----HHHHHCTTSCCCC------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred ----HHHHhcCCcccCC------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence 1111111111000 11123568899999999999999999999998663
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=352.55 Aligned_cols=263 Identities=25% Similarity=0.419 Sum_probs=205.9
Q ss_pred cCCCCCceeeccCcceEEEEEeCC----CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.+|+..+.||+|+||+||+|+..+ +..||+|++.... ....+.+.+|+.++++++||||+++++++...+. .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---S 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS---C
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC---c
Confidence 458888999999999999998542 3368999987543 3445778999999999999999999998754432 3
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccc
Confidence 46999999999999999876667899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCc--eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhC-CCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 861 TREDQ--FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTG-KKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 861 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
..... ........+|+.|+|||.+.+..++.++||||+||++|||++| .+||...... . .... +
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-~-~~~~-----------~ 245 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-D-ITVY-----------L 245 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-T-HHHH-----------H
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-H-HHHH-----------H
Confidence 54332 1223455678899999999888999999999999999999994 5555442221 1 1110 0
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
....... .+..++..+.+++.+||+.+|++|||+.|+++.|+++......
T Consensus 246 ~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 246 LQGRRLL-------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp HTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred hcCCCCC-------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0010000 0112345689999999999999999999999999999875544
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=364.05 Aligned_cols=278 Identities=21% Similarity=0.271 Sum_probs=196.8
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc--cchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 779 (1002)
..++|+..+.||+|+||+||+|.. .+|+.||||++... .......+.+|+.+++++. ||||+++++++...+..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~-- 84 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR-- 84 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS--
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC--
Confidence 457899999999999999999985 47999999998643 2334567788999999997 99999999998754422
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||++ |+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 3479999997 5999998764 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCC-------------------ceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCccccccc
Q 037042 860 LTRED-------------------QFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG 919 (1002)
Q Consensus 860 ~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~ 919 (1002)
+.... .....+..+||+.|+|||++.+ ..|+.++||||+||++|||++|+.||.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 54311 1112244579999999998876 678999999999999999999999997642211
Q ss_pred ccHHHHHHHHHhhh---hhhcccC-----------------ccCChhhh-------HHHhHHHHHHHHHHHHhHccccCC
Q 037042 920 MTLKHWVNDWLLIS---IMKIVDG-----------------SLLSREDI-------QFVAKEQCMSFVFNMAMECTVESP 972 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~---~~~i~~~-----------------~~~~~~~~-------~~~~~~~~~~~l~~li~~cl~~~P 972 (1002)
.+........... +..+..+ ........ ....+..++..+.+++.+||+.||
T Consensus 239 -~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 239 -QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp -HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred -HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 1111111100000 0000000 00000000 000011345678999999999999
Q ss_pred CCCCCHHHHHHH--HHhhcc
Q 037042 973 EKRINAKEIVTR--LLKIND 990 (1002)
Q Consensus 973 ~~Rpt~~evl~~--L~~i~~ 990 (1002)
++|||++|+++| +..+.+
T Consensus 318 ~~R~t~~e~l~Hp~~~~~~~ 337 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIFHN 337 (388)
T ss_dssp GGSCCHHHHTTSTTTTTTCC
T ss_pred ccCCCHHHHhCCHHHHHhcC
Confidence 999999999999 444543
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=357.72 Aligned_cols=251 Identities=21% Similarity=0.257 Sum_probs=183.0
Q ss_pred CceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 711 NNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
.+.||+|+||+||+|+.. +++.||||++.+. ....+.+|+.+++.+. ||||+++++++.... ..++||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~----~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL----HTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----EEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC----EEEEEEEcc
Confidence 478999999999999865 6899999999754 3466788999999997 999999999998776 557999999
Q ss_pred CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC---cEEEecccccccccCCCc
Q 037042 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM---VAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 789 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfGla~~~~~~~~ 865 (1002)
++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+||+++.++ .+||+|||+++.......
T Consensus 89 ~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 89 NGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp CSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 9999999998764 5899999999999999999999 89999999999999997665 899999999986654322
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc--ccHHHHHHHHHhhhhhhcccCccC
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG--MTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.. ..+..+...
T Consensus 165 --~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--------~~i~~~~~~ 234 (325)
T 3kn6_A 165 --PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM--------KKIKKGDFS 234 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH--------HHHTTTCCC
T ss_pred --cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH--------HHHHcCCCC
Confidence 2234568999999999999999999999999999999999999997643221 1111111 112222111
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... .....++..+.+++.+||+.||++|||++|+++|-+
T Consensus 235 ~~~----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w 273 (325)
T 3kn6_A 235 FEG----EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEW 273 (325)
T ss_dssp CCS----HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred CCc----ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChh
Confidence 111 111234577899999999999999999999998865
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=346.08 Aligned_cols=256 Identities=20% Similarity=0.288 Sum_probs=208.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++ ..+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 81 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN----IQY 81 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT----EEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC----EEE
Confidence 356899999999999999999865 68999999987543 345678899999999999999999999998765 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 9999999999999997654 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........||..|+|||+..+..+ +.++|||||||++|||++|+.||............|.. ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------------~~ 225 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE------------KK 225 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT------------TC
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh------------cc
Confidence 433223345678999999999887765 78999999999999999999999765433222222211 00
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... .....+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 226 ~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (276)
T 2yex_A 226 TYLN------PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264 (276)
T ss_dssp TTST------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred cccC------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCcc
Confidence 0000 01123456889999999999999999999998754
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=367.53 Aligned_cols=260 Identities=19% Similarity=0.230 Sum_probs=195.7
Q ss_pred hcCCCCC-ceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHh-ccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSEN-NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKS-IRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|... +.||+|+||+||+|+.. +|+.||||++... ..+.+|++++.+ .+||||+++++++..........
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456665 68999999999999865 6899999998643 456778888754 58999999999886521111245
Q ss_pred HHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEeccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGIT 857 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla 857 (1002)
++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 79999999999999998754 36899999999999999999999 899999999999999987 789999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccccc--HHHHHHHHHhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT--LKHWVNDWLLISIM 935 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~--~~~~~~~~~~~~~~ 935 (1002)
+...... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||......... ....+
T Consensus 212 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i--------- 279 (400)
T 1nxk_A 212 KETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI--------- 279 (400)
T ss_dssp EECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH---------
T ss_pred cccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH---------
Confidence 8665332 224557899999999999999999999999999999999999999764332211 11110
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..+....... ....++..+.+++.+||+.||++|||+.|+++|-+-...
T Consensus 280 --~~~~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 280 --RMGQYEFPNP----EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp --HHTCCCCCTT----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred --HcCcccCCCc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 0000000000 012245678999999999999999999999999775443
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=349.92 Aligned_cols=258 Identities=23% Similarity=0.387 Sum_probs=208.8
Q ss_pred cCCCCCc-eeeccCcceEEEEEeC---CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENN-LIGRGGFGSVYKARIQ---DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|.+.+ .||+|+||.||+|... ++..||||+++... ....+.+.+|++++++++||||+++++++....
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 83 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA----- 83 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-----
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCC-----
Confidence 4565655 8999999999999753 57889999998653 345678899999999999999999999995433
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred cEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 47999999999999999876667999999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCceee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 861 TREDQFVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... .... +.
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~--------i~ 227 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAF--------IE 227 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-----HHHH--------HH
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-----HHHH--------Hh
Confidence 54433222 233457889999999988889999999999999999998 999997643211 1110 00
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..... ..+..++..+.+++.+||+.+|++||++.|++++|+++...
T Consensus 228 ~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 228 QGKRM-------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp TTCCC-------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCcC-------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 00000 01123456799999999999999999999999999988643
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=347.99 Aligned_cols=252 Identities=21% Similarity=0.370 Sum_probs=186.3
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 85 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN----Y 85 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS----E
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC----e
Confidence 45799999999999999999986 479999999997542 223477889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 86 VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 67999999999999999877667899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......||+.|+|||+..+..++.++||||+||++|||++|+.||........ ..++...
T Consensus 163 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------------~~~~~~~ 227 (278)
T 3cok_A 163 KMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-------------LNKVVLA 227 (278)
T ss_dssp C------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSS
T ss_pred cCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-------------HHHHhhc
Confidence 53322 12335689999999999888899999999999999999999999976432211 1111111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... +...+..+.+++.+||+.+|++|||++|+++|-.
T Consensus 228 ~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 265 (278)
T 3cok_A 228 DYEM--------PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265 (278)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred ccCC--------ccccCHHHHHHHHHHcccCHhhCCCHHHHhcCcc
Confidence 1110 1123456889999999999999999999998744
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=353.64 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=206.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch------hHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR------AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-- 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 356899999999999999999865 6899999998754321 3577899999999999999999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEec
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSD 853 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~D 853 (1002)
..++||||+++++|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 89 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 89 --DVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp --EEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred --EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 5679999999999999997654 4889999999999999999999 89999999999999999887 799999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +...
T Consensus 163 fg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~------ 228 (321)
T 2a2a_A 163 FGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----ETLA------ 228 (321)
T ss_dssp CTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHH------
T ss_pred CccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-----HHHH------
Confidence 999987654332 23456899999999999889999999999999999999999999653221 1111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+......... ......+..+.+++.+||..||++|||+.|+++|-+
T Consensus 229 --~i~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~ 275 (321)
T 2a2a_A 229 --NITSVSYDFDE----EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (321)
T ss_dssp --HHHTTCCCCCH----HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred --HHHhcccccCh----hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 11111111110 011234567899999999999999999999998743
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-39 Score=347.71 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=201.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+ .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 83 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT----R 83 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC----E
Confidence 467999999999999999999865 57899999986532 223567889999999999999999999998776 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 84 VYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 579999999999999997654 4899999999999999999999 899999999999999999999999999998654
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ..... +...
T Consensus 160 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~--------~~~~ 222 (279)
T 3fdn_A 160 PSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-----ETYKR--------ISRV 222 (279)
T ss_dssp ------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH--------HHHT
T ss_pred Cccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-----HHHHH--------HHhC
Confidence 4322 23457899999999999989999999999999999999999999753211 11111 0000
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... .+...+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 223 ~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 223 EFT--------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp CCC--------CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred CCC--------CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 000 01123456889999999999999999999999966
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-39 Score=359.17 Aligned_cols=260 Identities=20% Similarity=0.288 Sum_probs=201.0
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc-----cchhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ-----CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
...++|+..+.||+|+||+||+|+.. +++.||+|++.+. .....+.+.+|++++++++||||+++++++...+
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~- 101 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ- 101 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC-
Confidence 45567999999999999999999864 6889999998753 2345678899999999999999999999998776
Q ss_pred hhHHHHHhhccCCCCChhHhhhcc---------------------------------------CCcCCHHHHHHHHHHHH
Q 037042 777 KALFKALALEYMPHGSLEKYLYSS---------------------------------------NYILDIFQRLNIMIDVA 817 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia 817 (1002)
..++||||+++|+|.+++... ...+++..++.++.||+
T Consensus 102 ---~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 102 ---YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp ---EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred ---eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 567999999999999998521 11235677888999999
Q ss_pred HHHHHHHcCCCCCcEEccCCCCCeeeCCCC--cEEEecccccccccCCCc--eeeeccCCCCcccccccccCC--CCcCc
Q 037042 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNM--VAHLSDFGITKLLTREDQ--FVTQTQTPATIGYMALEYGSE--GRVST 891 (1002)
Q Consensus 818 ~~l~~LH~~~~~~iiHrDlkp~NILl~~~~--~~kl~DfGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~ 891 (1002)
+||+||| +.+|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||++.+ ..++.
T Consensus 179 ~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 179 SALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 9999999 88999999999999998766 899999999987644221 112345679999999998865 67899
Q ss_pred ccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccC
Q 037042 892 NGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVES 971 (1002)
Q Consensus 892 ~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 971 (1002)
++|||||||++|||++|+.||....... .. ..+.......... .....+..+.+++.+||+.+
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~~-----~~--------~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~ 318 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDAD-----TI--------SQVLNKKLCFENP----NYNVLSPLARDLLSNLLNRN 318 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HH--------HHHHHCCCCTTSG----GGGGSCHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChHH-----HH--------HHHHhcccccCCc----ccccCCHHHHHHHHHHcCCC
Confidence 9999999999999999999997643221 11 1111111111110 11123567889999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 037042 972 PEKRINAKEIVTRLL 986 (1002)
Q Consensus 972 P~~Rpt~~evl~~L~ 986 (1002)
|++||++.|+++|-+
T Consensus 319 p~~Rps~~~~l~hp~ 333 (345)
T 3hko_A 319 VDERFDAMRALQHPW 333 (345)
T ss_dssp TTTSCCHHHHHHSHH
T ss_pred hhHCCCHHHHhcChh
Confidence 999999999999854
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=352.10 Aligned_cols=265 Identities=21% Similarity=0.265 Sum_probs=199.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+ ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~ 78 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR----RLH 78 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC----eEE
Confidence 57899999999999999999865 589999999865432 33567889999999999999999999998766 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 79 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 79 LVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 9999999999999886554 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH-----------HH
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND-----------WL 930 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~-----------~~ 930 (1002)
... ......||..|+|||++.+ ..++.++||||+||++|||++|+.||........ ....... +.
T Consensus 155 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 4agu_A 155 PSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQVFS 231 (311)
T ss_dssp -------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHH
T ss_pred ccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhcccccccccccc
Confidence 332 2234578999999998765 5689999999999999999999999976432211 1110000 00
Q ss_pred hhhh-h--hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 931 LISI-M--KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 931 ~~~~-~--~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.... . .+.++.... ... .....++..+.+++.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 232 TNQYFSGVKIPDPEDME--PLE-LKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCGGGTTCCCCCCSSCC--CHH-HHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccCcCCCccccc--hhh-hhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0 000000000 000 0112345678999999999999999999999987
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=356.64 Aligned_cols=258 Identities=27% Similarity=0.463 Sum_probs=201.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCC-----CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD-----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|+..+.||+|+||+||+|+... +..||||+++... ......+.+|++++++++||||+++++++...+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 119 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---- 119 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC----
Confidence 467778999999999999997542 3469999997653 334567889999999999999999999997765
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++......+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 120 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 120 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred CcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 567999999999999999877667999999999999999999999 88999999999999999999999999999987
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
....... .......+|..|+|||++.+..++.++|||||||++|||++ |+.||...... +... .+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~--------~~ 263 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVMK--------AI 263 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH--------HH
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHHH--------HH
Confidence 6543221 12233456788999999988899999999999999999999 99999653221 1111 11
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.+..... .+..++..+.+++.+||+.+|++||++.|++++|+++..
T Consensus 264 ~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 264 NDGFRLP-------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp HTTCCCC-------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HCCCcCC-------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1110000 011245678999999999999999999999999998754
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-39 Score=365.27 Aligned_cols=253 Identities=21% Similarity=0.321 Sum_probs=198.2
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcc--CCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIR--HRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.+|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+ ..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~----~~ 131 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ----YI 131 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----EE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC----EE
Confidence 4599999999999999999998789999999987542 345678899999999996 599999999998776 46
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||| +.+++|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 132 ~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 132 YMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 89999 56889999998765 5888899999999999999999 89999999999999995 5899999999998776
Q ss_pred CCCceeeeccCCCCcccccccccCC-----------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE-----------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
............||+.|+|||++.+ ..|+.++|||||||++|||++|+.||........ .
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~----~----- 276 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----K----- 276 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH----H-----
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH----H-----
Confidence 5433323345679999999998754 4689999999999999999999999975322111 1
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+..+.++...... +...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 277 ---~~~~~~~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 277 ---LHAIIDPNHEIEF------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp ---HHHHHCTTSCCCC------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ---HHHHhCccccCCC------CccchHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 1112221111000 0112356889999999999999999999998865
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=376.01 Aligned_cols=251 Identities=22% Similarity=0.272 Sum_probs=196.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++.+. .......+.+|+++++.++||||+++++++...+ .
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----~ 222 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----R 222 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT----E
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC----E
Confidence 467999999999999999999854 6899999999754 2233466778999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+||| + ++|+||||||+|||++.++.+||+|||+|+.
T Consensus 223 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 223 LCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 679999999999999997765 4899999999999999999999 7 8999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ......||+.|+|||++.+..|+.++|||||||++|||++|+.||...... ..... +..
T Consensus 299 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~--------i~~ 363 (446)
T 4ejn_A 299 GIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFEL--------ILM 363 (446)
T ss_dssp TCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHH
T ss_pred ccCCCc--ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHHH--------HHh
Confidence 443222 234567999999999999999999999999999999999999999763221 11111 111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
..... +...+..+.+++.+||+.||++|| +++|+++|-.
T Consensus 364 ~~~~~--------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~ 407 (446)
T 4ejn_A 364 EEIRF--------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407 (446)
T ss_dssp CCCCC--------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred CCCCC--------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcc
Confidence 11111 112346688999999999999999 9999998743
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=346.26 Aligned_cols=254 Identities=19% Similarity=0.309 Sum_probs=205.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|++.+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~ 80 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES----FH 80 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC----EE
Confidence 468999999999999999999865 68999999987543 334577889999999999999999999998766 45
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfGla~ 858 (1002)
++||||+++|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||++.
T Consensus 81 ~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 79999999999999887664 4899999999999999999999 899999999999999976655 9999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .........
T Consensus 157 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~------ 222 (284)
T 3kk8_A 157 EVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-----RLYAQIKAG------ 222 (284)
T ss_dssp ECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHT------
T ss_pred EcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-----HHHHHHHhc------
Confidence 7654432 23467899999999999999999999999999999999999999663221 111111100
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....... ....++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 223 --~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 223 --AYDYPSP----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp --CCCCCTT----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred --cccCCch----hhcccCHHHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence 0000000 01123466889999999999999999999999854
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-39 Score=359.03 Aligned_cols=251 Identities=24% Similarity=0.319 Sum_probs=202.9
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
+.|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~ 129 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH----TA 129 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----eE
Confidence 3588889999999999999985 579999999987542 234467889999999999999999999998766 55
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||++ |++.+++...+..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 130 ~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 130 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 79999997 6898888766667999999999999999999999 8899999999999999999999999999998664
Q ss_pred CCCceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
.. ....||+.|+|||++. .+.++.++|||||||++|||++|+.||...... ...... ..-.
T Consensus 206 ~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-----~~~~~~-----~~~~ 269 (348)
T 1u5q_A 206 PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHI-----AQNE 269 (348)
T ss_dssp SB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHH-----HHSC
T ss_pred CC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHH-----HhcC
Confidence 32 2357899999999873 567899999999999999999999998653221 111110 0000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.+... +...+..+.+++.+||+.+|++|||++|+++|.+-.+
T Consensus 270 ~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 270 SPALQ---------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp CCCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred CCCCC---------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 01000 1123456889999999999999999999999876544
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=370.94 Aligned_cols=271 Identities=20% Similarity=0.155 Sum_probs=198.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++... .....+.+.+|+.+++.++||||+++++++...... ..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999854 6899999999754 334467788999999999999999999998755311 11
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++ ++.+.+.. .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 34799999976 56666643 3889999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh-------
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI------- 932 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~------- 932 (1002)
..... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||....... .+...+......
T Consensus 214 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 214 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ---CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTT
T ss_pred cCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHH
Confidence 65432 2245678999999999999999999999999999999999999997632211 111111110000
Q ss_pred ---hhhhcccCcc--CChhhh----------HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 ---SIMKIVDGSL--LSREDI----------QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 ---~~~~i~~~~~--~~~~~~----------~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.......... ...... ...........+.+++.+||.+||++|||++|+++|-+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 358 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChh
Confidence 0000000000 000000 00011233677899999999999999999999999854
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=363.32 Aligned_cols=249 Identities=25% Similarity=0.295 Sum_probs=193.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHH-HHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEV-MKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++++.. ......+..|..+ ++.++||||+++++++...+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~---- 112 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD---- 112 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC----
Confidence 457999999999999999999865 58899999997653 2234456667776 56789999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 113 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 113 KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 5689999999999999998755 4888999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||...... +... .+..
T Consensus 189 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~--------~i~~ 253 (373)
T 2r5t_A 189 NIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EMYD--------NILN 253 (373)
T ss_dssp GBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-----HHHH--------HHHH
T ss_pred cccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----HHHH--------HHHh
Confidence 433221 234567999999999999999999999999999999999999999763221 1111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH----HHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAK----EIVTR 984 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~----evl~~ 984 (1002)
...... ...+..+.+++.+||+.||++||++. |+.+|
T Consensus 254 ~~~~~~--------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 254 KPLQLK--------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp SCCCCC--------SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred cccCCC--------CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 111111 12345688999999999999999974 55554
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=358.80 Aligned_cols=244 Identities=23% Similarity=0.328 Sum_probs=202.6
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccc--------hhHHHHHHHHHHHHhccCCCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG--------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 46799999999999999999985 4789999999975421 12345678999999999999999999998776
Q ss_pred hhhHHHHHhhccCCCC-ChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 776 FKALFKALALEYMPHG-SLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
..++||||+.+| +|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 103 ----~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 103 ----FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp ----EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred ----EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeec
Confidence 557999999777 9999997665 4899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
|+++........ ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 175 g~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------- 236 (335)
T 3dls_A 175 GSAAYLERGKLF---YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------- 236 (335)
T ss_dssp TTCEECCTTCCB---CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------
T ss_pred ccceECCCCCce---eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------
Confidence 999877654322 33568999999999888776 88999999999999999999999763211
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....... +..++..+.+++.+||+++|++|||+.|+++|-+
T Consensus 237 ----~~~~~~~--------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 237 ----VEAAIHP--------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp ----TTTCCCC--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred ----HhhccCC--------CcccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 1111111 1113456889999999999999999999999854
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-39 Score=354.43 Aligned_cols=264 Identities=22% Similarity=0.291 Sum_probs=199.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .......+.+|++++++++||||+++++++...+ .
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~ 106 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN----E 106 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT----E
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----c
Confidence 45799999999999999999985 47999999998753 2345677889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 781 KALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
.++||||+++|+|.+++.. .+..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~ 183 (310)
T 2wqm_A 107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLG 183 (310)
T ss_dssp EEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC---
T ss_pred EEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccce
Confidence 5799999999999999865 2346899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
........ ......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ...+.........
T Consensus 184 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~--- 255 (310)
T 2wqm_A 184 RFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQCDY--- 255 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHHHHTTCS---
T ss_pred eeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHHhhcccC---
Confidence 87654322 123456899999999999889999999999999999999999999753221 1121111111000
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
+... ...++..+.+++.+||..||++|||+.+++++|++++.....
T Consensus 256 --~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 256 --PPLP---------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp --CCCC---------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred --CCCc---------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 0000 112345788999999999999999999999999999876544
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=358.20 Aligned_cols=271 Identities=18% Similarity=0.196 Sum_probs=201.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeecccch-----------hHHHHHHHHHHHHhccCCCcceeee
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQCGR-----------AFKSFDVECEVMKSIRHRNIIKIIS 769 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~ 769 (1002)
.++|+..+.||+|+||+||+|+.. ++..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999865 5788999998765322 1233567888999999999999999
Q ss_pred EEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC--
Q 037042 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-- 847 (1002)
Q Consensus 770 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-- 847 (1002)
++..........++||||+ +++|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9877221122567999999 999999998765 5899999999999999999999 88999999999999998777
Q ss_pred cEEEecccccccccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccH
Q 037042 848 VAHLSDFGITKLLTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~ 922 (1002)
.+||+|||+++.+....... ......||..|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 99999999998765432111 1134579999999999998899999999999999999999999996533222211
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
....... ...+.... ........++..+.+++.+||..+|++||++.++++.|+++.-
T Consensus 271 ~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 271 QTAKTNL-LDELPQSV---------LKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHH-HHTTTHHH---------HHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHhh-cccccHHH---------HhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111111 00000000 0000011345679999999999999999999999999998664
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=349.69 Aligned_cols=264 Identities=23% Similarity=0.398 Sum_probs=207.8
Q ss_pred CCCCCceeeccCcceEEEEEeC-C---CcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-D---GMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.|...++||+|+||+||+|++. + +..||+|++..... ...+.+.+|++++++++||||+++++++...+. ..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG---LP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS---CC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC---Cc
Confidence 4566689999999999999853 2 33799999875433 345788899999999999999999999976542 23
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+.+|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 6899999999999999886667899999999999999999999 8899999999999999999999999999998665
Q ss_pred CCCce--eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 862 REDQF--VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 862 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... .......+|..|+|||...+..++.++|||||||++|||++|..|+........ ....+. .
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~-----------~ 243 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFLA-----------Q 243 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHHH-----------T
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHhh-----------c
Confidence 43211 122345678899999999999999999999999999999996666543222211 111111 0
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
..... .+..++..+.+++.+||+.+|++|||+.|+++.|+++.......
T Consensus 244 ~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 244 GRRLP-------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp TCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred CCCCC-------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 00000 01123467899999999999999999999999999987665443
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=375.13 Aligned_cols=255 Identities=20% Similarity=0.292 Sum_probs=207.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++.+.. ......+.+|++++++++|||||++++++...+ .
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----~ 258 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----A 258 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----E
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC----E
Confidence 456889999999999999999865 79999999997542 234567889999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++||||+++|+|.+++...+. .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 259 l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~ 335 (576)
T 2acx_A 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVH 335 (576)
T ss_dssp EEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEeccccee
Confidence 6899999999999999876543 5899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ....+||+.|+|||++.+..|+.++||||+||++|||++|+.||........ ........ ..
T Consensus 336 ~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~~i-----~~--- 403 (576)
T 2acx_A 336 VPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLV-----KE--- 403 (576)
T ss_dssp CCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHHHH-----HH---
T ss_pred cccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHHHh-----hc---
Confidence 754432 2345899999999999998999999999999999999999999976432211 11111110 00
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
..... +...+..+.+++.+||+.||++|| +++|+++|-+
T Consensus 404 ~~~~~--------p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hpf 447 (576)
T 2acx_A 404 VPEEY--------SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447 (576)
T ss_dssp CCCCC--------CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGG
T ss_pred ccccC--------CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChh
Confidence 00000 112346788999999999999999 7899998743
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=357.37 Aligned_cols=252 Identities=15% Similarity=0.138 Sum_probs=204.0
Q ss_pred hcCCCCCceeeccCcceEEEEE------eCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc---CCCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR------IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR---HRNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 775 (1002)
.++|.+.+.||+|+||+||+|+ ..+++.||||++.... ...+..|++++++++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 4679999999999999999994 4468899999997543 456778888888886 999999999998776
Q ss_pred hhhHHHHHhhccCCCCChhHhhhc----cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC------
Q 037042 776 FKALFKALALEYMPHGSLEKYLYS----SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD------ 845 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~------ 845 (1002)
..++||||+++|+|.+++.. ....+++..++.|+.||++||+||| +++|+||||||+|||++.
T Consensus 141 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 141 ----GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ----CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-
T ss_pred ----CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcc
Confidence 45799999999999999975 2346999999999999999999999 899999999999999998
Q ss_pred -----CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc
Q 037042 846 -----NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM 920 (1002)
Q Consensus 846 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~ 920 (1002)
++.+||+|||+|+.+.............||+.|+|||++.+..|+.++|||||||++|||++|+.||........
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 293 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce
Confidence 899999999999876543333344667899999999999999999999999999999999999999966433211
Q ss_pred cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCC-CCHHHHHHHHHhhccc
Q 037042 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKR-INAKEIVTRLLKINDL 991 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R-pt~~evl~~L~~i~~~ 991 (1002)
. ...... .. .....+.+++..|++.+|.+| |+++++.+.|+++-..
T Consensus 294 ~------------~~~~~~----~~---------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 K------------PEGLFR----RL---------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp E------------ECSCCT----TC---------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred e------------echhcc----cc---------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0 001110 00 013457789999999999998 5688888888776544
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=373.00 Aligned_cols=199 Identities=21% Similarity=0.299 Sum_probs=155.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch-hhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF-KALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+. ....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467999999999999999999854 78999999987542 3345778899999999999999999999865431 1124
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+ +|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 57999998 569999987654 5899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCce-------------------------eeeccCCCCccccccccc-CCCCcCcccchHHHHHHHHHHHhC
Q 037042 861 TREDQF-------------------------VTQTQTPATIGYMALEYG-SEGRVSTNGDVYNFGVMLMETFTG 908 (1002)
Q Consensus 861 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg 908 (1002)
...... ...+..+||+.|+|||++ ....|+.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 532211 123455789999999975 566799999999999999999994
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=357.81 Aligned_cols=269 Identities=20% Similarity=0.259 Sum_probs=197.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||+|+||+||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++...+ ..++
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~l 77 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK----SLTL 77 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS----CEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC----EEEE
Confidence 57889999999999999999865 7899999998754321 1223457999999999999999999998776 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||++ |+|.+++...+..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 78 VFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp EEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred Eecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 999997 5999999887777999999999999999999999 899999999999999999999999999999865433
Q ss_pred CceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........ .............
T Consensus 154 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~-~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 154 TK--TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRI-LGTPTEETWPGIL 229 (324)
T ss_dssp -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH-HCCCCTTTSTTGG
T ss_pred cc--ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH-hCCCChHhchhhh
Confidence 22 2234578999999998776 568999999999999999999999997643221 11111111 0000000000000
Q ss_pred CCh-----------hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 943 LSR-----------EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 943 ~~~-----------~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... ...........+..+.+++.+||+.||++|||++|+++|-+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 284 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence 000 00001111234567889999999999999999999999844
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=359.92 Aligned_cols=261 Identities=22% Similarity=0.374 Sum_probs=210.1
Q ss_pred hhcCCCCCceeeccCcceEEEEEeCC------CcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCc
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGD 775 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 775 (1002)
..++|+..+.||+|+||+||+|+... +..||+|++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 35679999999999999999998642 2479999997653 33457789999999999 8999999999998766
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccC-------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCee
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSN-------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVL 842 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NIL 842 (1002)
..++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+
T Consensus 124 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 124 ----PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL 196 (333)
T ss_dssp ----SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCE
T ss_pred ----ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEE
Confidence 5679999999999999987532 24789999999999999999999 889999999999999
Q ss_pred eCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCccccccccc
Q 037042 843 LGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMT 921 (1002)
Q Consensus 843 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~ 921 (1002)
++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~- 275 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK- 275 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-
Confidence 99999999999999987655443333345567889999999888889999999999999999999 9999876432211
Q ss_pred HHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 922 LKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .. .... .+..++..+.+++.+||+.+|++|||+.|++++|+++..
T Consensus 276 ~~~~~~----~~----~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 276 FYKLVK----DG----YQMA----------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHHH----HT----CCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHh----cC----CCCC----------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 111110 00 0000 011234568899999999999999999999999998764
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=363.89 Aligned_cols=277 Identities=20% Similarity=0.270 Sum_probs=213.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..++||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+.. ..+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~--~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR--HKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC--CEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCC--eeE
Confidence 357899999999999999999865 58999999997543 23456778999999999999999999998765422 346
Q ss_pred HhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee----CCCCcEEEecccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAHLSDFGI 856 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGl 856 (1002)
+||||+++|+|.+++..... .+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 99999999999999987543 3899999999999999999999 8999999999999999 7888899999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCC--------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSE--------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
++....... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||........... .+..
T Consensus 163 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~-~~~~ 238 (396)
T 4eut_A 163 ARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE-VMYK 238 (396)
T ss_dssp CEECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHH-HHHH
T ss_pred ceEccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHH-HHHH
Confidence 987654432 234578999999998754 5678999999999999999999999976443332222 2221
Q ss_pred HHhhh----hhhc---ccCccCCh--hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 929 WLLIS----IMKI---VDGSLLSR--EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 929 ~~~~~----~~~i---~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..... +..+ .+...... ..............+.+++.+||++||++||++.|++++++++-.
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred HhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 11111 0000 00000000 000111234567889999999999999999999999999988754
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=350.86 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=211.4
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..++|+..+.||+|+||+||+|+.. ++..||+|++.... ...+.+.+|++++++++||||+++++++.... ..+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~ 85 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFY 85 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----CEE
Confidence 3567889999999999999999866 58899999997543 34677899999999999999999999998766 457
Q ss_pred HhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
+||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999997643 35899999999999999999999 8899999999999999999999999999998766
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .......+|+.|+|||++.+..++.++||||+||++|||++ |..||....... ....+ ......
T Consensus 163 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~~~~--------~~~~~~ 231 (288)
T 3kfa_A 163 GDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELL--------EKDYRM 231 (288)
T ss_dssp SSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHH--------HTTCCC
T ss_pred CCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH--------hccCCC
Confidence 4432 23344567888999999988899999999999999999999 999987643221 11110 000000
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
. .+..++..+.+++.+|+..+|++|||+.|+++.|+++..
T Consensus 232 ~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 232 E----------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C----------CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 0 112245678999999999999999999999999988653
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=367.72 Aligned_cols=205 Identities=22% Similarity=0.294 Sum_probs=168.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-HH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA-LF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++....... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568999999999999999999864 68899999997542 334577889999999999999999999987653211 13
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||++ |+|.+++.... .+++..++.++.||++||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 579999996 59999997654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCce--------------------eeeccCCCCccccccccc-CCCCcCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 861 TREDQF--------------------VTQTQTPATIGYMALEYG-SEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 861 ~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
...... ...+..+||+.|+|||++ ....|+.++||||+||++|||++|..||..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 543221 123556799999999985 566799999999999999999987666543
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=352.65 Aligned_cols=269 Identities=20% Similarity=0.238 Sum_probs=200.4
Q ss_pred cCCCCC-ceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSEN-NLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+.|++. +.||+|+||+||+|+. .+++.||||++..........+.+|+++++++ +||||+++++++...+ ..+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~----~~~ 87 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED----RFY 87 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT----EEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC----EEE
Confidence 567774 7899999999999985 47999999999876555677899999999995 7999999999998766 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfGla~~ 859 (1002)
+||||+++|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.++. +||+|||++..
T Consensus 88 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 9999999999999998764 4899999999999999999999 889999999999999988766 99999999976
Q ss_pred ccCCCc-----eeeeccCCCCcccccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH--H
Q 037042 860 LTREDQ-----FVTQTQTPATIGYMALEYGSE-----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV--N 927 (1002)
Q Consensus 860 ~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~--~ 927 (1002)
...... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.............. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 543221 111223468999999998764 5589999999999999999999999976533221100000 0
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.....-...+.......... ....++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 298 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDK----DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred hHHHHHHHHHhccCcccCch----hcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence 00000001111111111110 11224567899999999999999999999999855
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=350.12 Aligned_cols=264 Identities=19% Similarity=0.221 Sum_probs=204.6
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..++|+..+.||+|+||+||+|+. .+++.||||++..... ...+.+|+++++.++|++++..+.++..... ..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD---YNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT---EEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCC---ceE
Confidence 457899999999999999999985 5789999998765422 2457889999999998887777766543221 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~ 859 (1002)
+||||+ +++|.+++......+++..+..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999999 99999999876667999999999999999999999 8999999999999999 7889999999999987
Q ss_pred ccCCCce-----eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc--cHHHHHHHHHhh
Q 037042 860 LTREDQF-----VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM--TLKHWVNDWLLI 932 (1002)
Q Consensus 860 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~--~~~~~~~~~~~~ 932 (1002)
....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6554321 122345789999999999999999999999999999999999999986433211 111111110000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.. ......++..+.+++.+||+.+|++|||+.++++.|+++...
T Consensus 238 ~~---------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 238 PI---------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp CH---------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hh---------------hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00 000122356799999999999999999999999999998754
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=365.45 Aligned_cols=255 Identities=23% Similarity=0.303 Sum_probs=195.0
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--------chhHHHHHHHHHHHHhccCCCcceeeeEEecC
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--------GRAFKSFDVECEVMKSIRHRNIIKIISCCSIG 774 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1002)
..++|...+.||+|+||+||+|... +++.||||++.+.. ......+.+|++++++++||||+++++++...
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 3578999999999999999999854 68999999987532 11223578899999999999999999998655
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC---CcEEE
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN---MVAHL 851 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl 851 (1002)
. .++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+|||++.+ +.+||
T Consensus 213 ~-----~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 213 D-----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp E-----EEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred c-----eEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEE
Confidence 4 369999999999999987654 4899999999999999999999 8899999999999999654 45999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
+|||+++...... ......||+.|+|||++.+ ..|+.++|||||||++|||++|+.||........ ....+
T Consensus 284 ~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i-- 357 (419)
T 3i6u_A 284 TDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQI-- 357 (419)
T ss_dssp CCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHH--
T ss_pred eecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHH--
Confidence 9999998765432 2234578999999998753 5688999999999999999999999976433222 11111
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
......... .....++..+.+++.+||+.+|++|||++|+++|-+
T Consensus 358 ---------~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 358 ---------TSGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp ---------HTTCCCCCH----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred ---------hcCCCCCCc----hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence 111111000 011234567899999999999999999999999854
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=351.22 Aligned_cols=272 Identities=26% Similarity=0.424 Sum_probs=213.6
Q ss_pred hcCCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..+|+..+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR-- 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC--
Confidence 35688899999999999999984 36899999999877666778899999999999999999999988654321
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred ceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 346999999999999999887667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc------cHHHHHHHHHhh
Q 037042 860 LTREDQFVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM------TLKHWVNDWLLI 932 (1002)
Q Consensus 860 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~------~~~~~~~~~~~~ 932 (1002)
......... .....++..|+|||++.+..++.++|||||||++|||++|..|+.....+.. ....+.. .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~----~ 270 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV----F 270 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHH----H
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhH----H
Confidence 765433222 2334577889999998888899999999999999999999999865321100 0000000 0
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.+.+.+...... ..+..++..+.+++.+||+.+|++|||+.|+++.|+++++.
T Consensus 271 ~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 271 HLIELLKNNGRL------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHTTCCC------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCC------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 011111110000 01123457799999999999999999999999999998753
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-39 Score=356.55 Aligned_cols=259 Identities=25% Similarity=0.419 Sum_probs=204.0
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|+..+.||+|+||.||+|++ .+++.||||++.... ......+.+|+.++++++||||+++++++...+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 46799999999999999999983 247789999997543 345567889999999999999999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccC------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMV 848 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~ 848 (1002)
..++||||+++|+|.+++.... ..+++..++.++.||++||+||| +.+|+||||||+||+++. +..
T Consensus 107 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~ 181 (327)
T 2yfx_A 107 --PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRV 181 (327)
T ss_dssp --SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCC
T ss_pred --CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcce
Confidence 4579999999999999998754 34889999999999999999999 899999999999999984 456
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~ 927 (1002)
+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~ 256 (327)
T 2yfx_A 182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLE 256 (327)
T ss_dssp EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHH
T ss_pred EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----HHHH
Confidence 99999999987654433333344567889999999888899999999999999999998 99998753221 1111
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
. +....... .+..++..+.+++.+||+.+|.+||++.|++++|+.+..
T Consensus 257 ~--------~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 257 F--------VTSGGRMD-------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp H--------HHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H--------HhcCCCCC-------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 1 11110000 012244678899999999999999999999999998864
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=382.69 Aligned_cols=254 Identities=22% Similarity=0.377 Sum_probs=202.2
Q ss_pred eeeccCcceEEEEEeC---CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 713 LIGRGGFGSVYKARIQ---DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 713 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++|||||++++++..+. .++||||+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~-----~~lv~E~~ 417 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-----LMLVMEMA 417 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSS-----EEEEEECC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCC-----eEEEEEeC
Confidence 7999999999999753 46779999997653 345678999999999999999999999997643 57999999
Q ss_pred CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCcee-
Q 037042 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV- 867 (1002)
Q Consensus 789 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~- 867 (1002)
++|+|.+++...+..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.........
T Consensus 418 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 418 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp TTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 999999999877667999999999999999999999 8999999999999999999999999999998765433221
Q ss_pred eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 868 TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 868 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..+...
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~-----------~i~~~~~~--- 558 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMA-----------FIEQGKRM--- 558 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHH-----------HHHTTCCC---
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHH-----------HHHcCCCC---
Confidence 1223346788999999988899999999999999999998 999997643221 111 11111100
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
..+..++..+.++|.+||+.+|++||++.++++.|+.+-.....
T Consensus 559 ----~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 559 ----ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp ----CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred ----CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 01223567899999999999999999999999999987644333
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=352.48 Aligned_cols=274 Identities=23% Similarity=0.283 Sum_probs=203.4
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-----chhHHHHHHHHHHHHhcc---CCCcceeeeEEecC
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-----GRAFKSFDVECEVMKSIR---HRNIIKIISCCSIG 774 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 774 (1002)
..++|++.+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999985 478999999987432 122356777888887775 99999999998765
Q ss_pred chh-hHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEe
Q 037042 775 DFK-ALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLS 852 (1002)
Q Consensus 775 ~~~-~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 852 (1002)
... ....++||||++ |+|.+++..... .+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 421 123479999997 599999987654 4899999999999999999999 8999999999999999999999999
Q ss_pred cccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ............
T Consensus 163 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred eCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 9999987654322 244578999999999988899999999999999999999999997643221 111111111000
Q ss_pred hhhhcc------cCccC--ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 SIMKIV------DGSLL--SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 ~~~~i~------~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... ..... ...... ....+.+..+.+++.+||++||++|||+.|+++|-+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~ 299 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQ-SVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHH-HHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred ChhhccchhhccccccCCCCCCcHH-HhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence 000000 00000 000000 111234567899999999999999999999998854
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=347.83 Aligned_cols=265 Identities=19% Similarity=0.225 Sum_probs=209.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|++++++++|++++..+.++...+. ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD---YNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT---EEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCC---ceEE
Confidence 46899999999999999999985 5799999999875432 2468899999999999887777666543321 4579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~~~ 860 (1002)
||||+ +++|.+++...+..+++..+..++.||+.||+||| +++|+||||||+||+++ .++.+||+|||+++..
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99999 89999999866667999999999999999999999 89999999999999994 8899999999999876
Q ss_pred cCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc--ccHHHHHHHHHhhh
Q 037042 861 TREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG--MTLKHWVNDWLLIS 933 (1002)
Q Consensus 861 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~ 933 (1002)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..............
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence 6543211 1234578999999999999999999999999999999999999998643221 11111111100000
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
. ......++..+.+++.+||+.+|++|||+.++++.|+++.....
T Consensus 239 ~---------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 239 I---------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp H---------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred h---------------HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0 00112345679999999999999999999999999999875543
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=360.12 Aligned_cols=256 Identities=21% Similarity=0.288 Sum_probs=202.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++.+.... ..+|++++.++ +||||+++++++..++ ..+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~----~~~ 92 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGK----YVY 92 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSS----EEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCC----EEE
Confidence 457999999999999999999865 6899999999765432 35688888888 7999999999998776 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC----CcEEEecccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN----MVAHLSDFGITK 858 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~ 858 (1002)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||++.++ +.+||+|||+++
T Consensus 93 lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 9999999999999997654 4899999999999999999999 8999999999999998533 359999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ....+........
T Consensus 169 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~------ 238 (342)
T 2qr7_A 169 QLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSG------ 238 (342)
T ss_dssp ECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHHHHHC------
T ss_pred cCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHHHccC------
Confidence 7654332 22345789999999998888899999999999999999999999975322 1222222211111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
....... .+...+..+.+++.+||..||++|||+.|+++|-+-.
T Consensus 239 --~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~ 282 (342)
T 2qr7_A 239 --KFSLSGG----YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282 (342)
T ss_dssp --CCCCCST----TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred --CcccCcc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence 1110000 0122456788999999999999999999999986643
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=379.98 Aligned_cols=257 Identities=24% Similarity=0.431 Sum_probs=209.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++.++..||||+++... ...+.+.+|+++|++++||||+++++++... ..++|
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~lv 339 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYIV 339 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SCEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeec-----cceEe
Confidence 45688889999999999999999888889999998653 2356789999999999999999999998753 35799
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 99999999999997542 35899999999999999999999 899999999999999999999999999999876532
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .......+|..|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +..+..
T Consensus 417 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~--------i~~~~~ 482 (535)
T 2h8h_A 417 EY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQ--------VERGYR 482 (535)
T ss_dssp HH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHH--------HHTTCC
T ss_pred ce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH--------HHcCCC
Confidence 21 11234457889999999988899999999999999999999 99999763221 11111 111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. ..+..++..+.++|.+||+.+|++|||+.++++.|+.+-..
T Consensus 483 ~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 483 M-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred C-------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 0 01123556789999999999999999999999999987643
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=342.65 Aligned_cols=249 Identities=24% Similarity=0.309 Sum_probs=205.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+ .
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 88 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK----R 88 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC----E
Confidence 357999999999999999999865 68899999986532 223567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 89 IYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp EEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 579999999999999998765 4899999999999999999999 899999999999999999999999999999765
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .....|+..|+|||++.+..++.++||||||+++|||++|+.||...... .... .+...
T Consensus 165 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~--------~~~~~ 227 (284)
T 2vgo_A 165 PSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ETHR--------RIVNV 227 (284)
T ss_dssp SSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHTT
T ss_pred cccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HHHH--------HHhcc
Confidence 4322 13457899999999999989999999999999999999999999763221 1111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... +...+..+.+++.+|++.+|++|||+.|+++|-+
T Consensus 228 ~~~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~ 265 (284)
T 2vgo_A 228 DLKF--------PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265 (284)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHH
T ss_pred ccCC--------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHH
Confidence 1111 1123456889999999999999999999999755
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=346.19 Aligned_cols=254 Identities=28% Similarity=0.425 Sum_probs=200.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|+.. |+.||||+++... ..+.+.+|++++++++||||+++++++..... ..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC---ceEEE
Confidence 357899999999999999999875 8899999987543 45778999999999999999999998755431 35799
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++...+. .+++..+..++.|+++|++||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 999999999999976543 4788999999999999999999 899999999999999999999999999999765433
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
. ....++..|+|||++.+..++.++||||||+++|||++ |+.||....... .. . .+.....
T Consensus 171 ~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~---~--------~~~~~~~ 232 (278)
T 1byg_A 171 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VV---P--------RVEKGYK 232 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HH---H--------HHTTTCC
T ss_pred c-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---H--------HHhcCCC
Confidence 2 22356888999999988889999999999999999998 999997642221 11 1 1111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.. .+..++..+.+++.+||+.+|++|||+.|+++.|++++...
T Consensus 233 ~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 233 MD-------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CC-------CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00 11234567899999999999999999999999999998654
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=350.01 Aligned_cols=262 Identities=21% Similarity=0.243 Sum_probs=199.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----~ 108 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG----Q 108 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----E
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC----e
Confidence 468999999999999999999865 68999999987542 223577889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 109 LYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 579999999999999998654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..... ...
T Consensus 185 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~--------~~~ 249 (309)
T 2h34_A 185 TDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS------VMGAH--------INQ 249 (309)
T ss_dssp -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH------HHHHH--------HHS
T ss_pred ccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH------HHHHH--------hcc
Confidence 54322 1223456899999999999989999999999999999999999999763221 11110 001
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-CHHHHHHHHHhhcccCC
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-NAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-t~~evl~~L~~i~~~~~ 993 (1002)
...... ..+..++..+.+++.+||+.+|++|| +++++++.|+++-....
T Consensus 250 ~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 250 AIPRPS----TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp CCCCGG----GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CCCCcc----ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 111000 01123456788999999999999999 99999999998765443
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=355.82 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=206.6
Q ss_pred HHHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--------hhHHHHHHHHHHHHhc-cCCCcceee
Q 037042 699 LELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--------RAFKSFDVECEVMKSI-RHRNIIKII 768 (1002)
Q Consensus 699 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~ 768 (1002)
.......++|++.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334445567999999999999999999875 799999999875431 1245678899999999 799999999
Q ss_pred eEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc
Q 037042 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV 848 (1002)
Q Consensus 769 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~ 848 (1002)
+++.... ..++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.
T Consensus 167 ~~~~~~~----~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 167 DSYESSS----FMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEBSS----EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCC
T ss_pred EEEeeCC----EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCC
Confidence 9998766 5679999999999999997654 4899999999999999999999 889999999999999999999
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccC------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~ 922 (1002)
+||+|||++..+..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||......
T Consensus 239 ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---- 311 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI---- 311 (365)
T ss_dssp EEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----
T ss_pred EEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH----
Confidence 99999999987765432 24467999999999875 335899999999999999999999999653211
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.... .+......... .....++..+.+++.+||+.+|++|||+.|+++|-
T Consensus 312 -~~~~--------~i~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 361 (365)
T 2y7j_A 312 -LMLR--------MIMEGQYQFSS----PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHP 361 (365)
T ss_dssp -HHHH--------HHHHTCCCCCH----HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred -HHHH--------HHHhCCCCCCC----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 1111 11111111110 01122456789999999999999999999999874
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=345.59 Aligned_cols=259 Identities=21% Similarity=0.292 Sum_probs=205.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc------hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
++|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++....
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC---
Confidence 46889999999999999999865 689999999875421 13678899999999999999999999998766
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEecc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSDF 854 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~Df 854 (1002)
..++||||+++++|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 82 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 82 -DVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred -eEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEec
Confidence 4579999999999999997654 4899999999999999999999 89999999999999998877 8999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
|++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....
T Consensus 157 g~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~------ 222 (283)
T 3bhy_A 157 GIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-----ETLTN------ 222 (283)
T ss_dssp TTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH------
T ss_pred ccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-----HHHHH------
Confidence 99987654332 23456899999999999889999999999999999999999999763221 11111
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhcccC
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKINDLD 992 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~~~ 992 (1002)
+......... ......+..+.+++.+||..+|++|||+.|+++| ++.++...
T Consensus 223 --~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 223 --ISAVNYDFDE----EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp --HHTTCCCCCH----HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred --hHhcccCCcc----hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 1111100000 1112345678999999999999999999999986 45554433
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=342.93 Aligned_cols=256 Identities=25% Similarity=0.400 Sum_probs=204.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh------
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK------ 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------ 777 (1002)
..+|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+|++++++++||||+++++++......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 456899999999999999999875 79999999997653 3467899999999999999999988542110
Q ss_pred ------hHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEE
Q 037042 778 ------ALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH 850 (1002)
Q Consensus 778 ------~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 850 (1002)
....++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 112469999999999999997643 36899999999999999999999 88999999999999999999999
Q ss_pred EecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 851 LSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 851 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
|+|||++........ .....||+.|+|||++.+..++.++|||||||++|||++|..|+.... .+...
T Consensus 163 l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~~~-- 230 (284)
T 2a19_B 163 IGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFFTD-- 230 (284)
T ss_dssp ECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHHHH--
T ss_pred ECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHHHH--
Confidence 999999987654432 234568999999999988889999999999999999999999875321 11111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
+.+.... ...+..+.+++.+||+.+|++|||+.|++++|+.++.....+
T Consensus 231 ------~~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 231 ------LRDGIIS----------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp ------HHTTCCC----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred ------hhccccc----------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 1111110 112345789999999999999999999999999998654443
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=356.99 Aligned_cols=265 Identities=12% Similarity=0.119 Sum_probs=205.9
Q ss_pred cCCCCCceeeccCcceEEEEEeCC---------CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcce----------
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD---------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK---------- 766 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 766 (1002)
++|+..+.||+|+||+||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 579999999999999999998653 789999998754 35788999999999999988
Q ss_pred -----eeeEEecCchhhHHHHHhhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCC
Q 037042 767 -----IISCCSIGDFKALFKALALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840 (1002)
Q Consensus 767 -----~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~N 840 (1002)
+++++...+ ...++||||+ +++|.+++... ...+++..++.++.||++||+||| +++|+||||||+|
T Consensus 117 ~~i~~~~~~~~~~~---~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~N 189 (352)
T 2jii_A 117 LAIPTCMGFGVHQD---KYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAEN 189 (352)
T ss_dssp CSCCCCCEEEEETT---TEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGG
T ss_pred cCccchhhccccCC---cEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHH
Confidence 566665422 1457999999 99999999875 346999999999999999999999 8899999999999
Q ss_pred eeeCCCC--cEEEecccccccccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCc
Q 037042 841 VLLGDNM--VAHLSDFGITKLLTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTN 913 (1002)
Q Consensus 841 ILl~~~~--~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~ 913 (1002)
|+++.++ .+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999988 99999999998765432211 1134478999999999999899999999999999999999999998
Q ss_pred ccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 914 EIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
................. .......+.... ....+..+.+++.+||..+|++|||++++++.|+++....
T Consensus 270 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFV-DKPGPFVGPCGH---------WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp GGTTCHHHHHHHHHHHH-HSCCCEECTTSC---------EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cCCcCHHHHHHHHHhcc-CChhhhhhhccc---------cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 75433222222221111 111111111000 0112467899999999999999999999999999987543
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=344.48 Aligned_cols=252 Identities=18% Similarity=0.258 Sum_probs=206.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~ 89 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----F 89 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC----E
Confidence 457899999999999999999865 58899999987542 234577889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++...+ .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 90 VFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 679999999999999987654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......||+.|+|||+..+..++.++||||+|+++|||++|+.||...... +... .+...
T Consensus 166 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~--------~~~~~ 230 (294)
T 2rku_A 166 EYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYL--------RIKKN 230 (294)
T ss_dssp CSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHTT
T ss_pred ccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHhhc
Confidence 53322 123456899999999998888999999999999999999999999763221 1111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.... +...+..+.+++.+||+.+|++|||++|+++|-.-
T Consensus 231 ~~~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~ 269 (294)
T 2rku_A 231 EYSI--------PKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269 (294)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred cCCC--------ccccCHHHHHHHHHHcccChhhCcCHHHHhhChhe
Confidence 1111 11234568899999999999999999999998663
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-38 Score=341.43 Aligned_cols=252 Identities=25% Similarity=0.324 Sum_probs=197.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 96 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH----NMY 96 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----EEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC----eEE
Confidence 356899999999999999999864 68999999987653 334678899999999999999999999998766 457
Q ss_pred HhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEecccc
Q 037042 783 LALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGI 856 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGl 856 (1002)
+||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 999999999999988653 246899999999999999999999 8999999999999999 4568899999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
++....... .....||+.|+|||++. +.++.++||||+||++|||++|+.||...... .........
T Consensus 174 a~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-----~~~~~~~~~---- 240 (285)
T 3is5_A 174 AELFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-----EVQQKATYK---- 240 (285)
T ss_dssp CCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHC----
T ss_pred ceecCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-----HHHhhhccC----
Confidence 987654322 24456899999999875 56899999999999999999999999763221 111110000
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
....... ....+..+.+++.+||+.||++|||+.|+++|-
T Consensus 241 --~~~~~~~-------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 280 (285)
T 3is5_A 241 --EPNYAVE-------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHE 280 (285)
T ss_dssp --CCCCCC---------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSG
T ss_pred --Ccccccc-------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 0000000 001235688999999999999999999999863
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=344.84 Aligned_cols=254 Identities=22% Similarity=0.308 Sum_probs=200.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..|...+.||+|+||+||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++..........+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34777889999999999999864 68899999987542 3446778999999999999999999998865322222457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeC-CCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLG-DNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~-~~~~~kl~DfGla~~ 859 (1002)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+ |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999997754 4899999999999999999999 777 99999999999997 789999999999976
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ....||+.|+|||++. +.++.++||||+||++|||++|+.||...... ...... +..
T Consensus 182 ~~~~~~----~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~--------~~~ 244 (290)
T 1t4h_A 182 KRASFA----KAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYRR--------VTS 244 (290)
T ss_dssp CCTTSB----EESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHHH--------HTT
T ss_pred cccccc----ccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHHHHH--------Hhc
Confidence 544322 3456899999999876 45899999999999999999999999763221 111111 111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... .+...+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 245 ~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 285 (290)
T 1t4h_A 245 GVKPAS------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp TCCCGG------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred cCCccc------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcc
Confidence 100000 11122356899999999999999999999998743
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=368.47 Aligned_cols=255 Identities=22% Similarity=0.308 Sum_probs=206.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|...+.||+|+||.||+|+.. +|+.||||++.+.. ......+.+|++++++++||||+++++++...+ .
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----~ 259 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT----D 259 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----E
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC----E
Confidence 367888999999999999999865 69999999997542 233567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
.++||||++||+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||++
T Consensus 260 l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla 336 (543)
T 3c4z_A 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336 (543)
T ss_dssp EEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeeccee
Confidence 689999999999999987643 36899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
+.+..... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||....... ....+... +
T Consensus 337 ~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~--------i 405 (543)
T 3c4z_A 337 VELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQR--------V 405 (543)
T ss_dssp EECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHH--------H
T ss_pred eeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHH--------H
Confidence 87654432 1234579999999999999999999999999999999999999997643211 11222111 1
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTRL 985 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~L 985 (1002)
....... +...+..+.+++.+||+.+|++||++ .|+++|-
T Consensus 406 ~~~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hp 450 (543)
T 3c4z_A 406 LEQAVTY--------PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450 (543)
T ss_dssp HHCCCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSG
T ss_pred hhcccCC--------CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCc
Confidence 1111111 12234678899999999999999964 7787763
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-37 Score=358.73 Aligned_cols=319 Identities=20% Similarity=0.181 Sum_probs=213.2
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.++.++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..| ..|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEP-GAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeCh-hhhhCCccCCEEECCCC
Confidence 4555666676 6777664 588999999999998778888889999999999998885444 44577888888888888
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIP 216 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p 216 (1002)
++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++ ..|
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------------~~~ 145 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY-------------------------ISH 145 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCE-------------------------ECT
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccce-------------------------eCh
Confidence 8886666678888888888888888887778888888888888888888874 235
Q ss_pred ccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccC
Q 037042 217 NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNAS 296 (1002)
Q Consensus 217 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 296 (1002)
..|.++++|++|+|++|++++..+..+.++++|+.|+|++|++. +..+..|..++
T Consensus 146 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~-------------------------~~~~~~~~~l~ 200 (477)
T 2id5_A 146 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN-------------------------AIRDYSFKRLY 200 (477)
T ss_dssp TSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCC-------------------------EECTTCSCSCT
T ss_pred hhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCc-------------------------EeChhhcccCc
Confidence 56778888888888888888766666666666666666666654 33333444444
Q ss_pred CCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccccccc
Q 037042 297 KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHS 376 (1002)
Q Consensus 297 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 376 (1002)
+|++|+|++|.+.+.+|..+....+|++|+|++|+++.++... +.++++|+.|+|++|.|.++
T Consensus 201 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-----~~~l~~L~~L~Ls~n~l~~~------------ 263 (477)
T 2id5_A 201 RLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA-----VRHLVYLRFLNLSYNPISTI------------ 263 (477)
T ss_dssp TCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHH-----HTTCTTCCEEECCSSCCCEE------------
T ss_pred ccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHH-----hcCccccCeeECCCCcCCcc------------
Confidence 4555555554444444444444445555555555555544321 34444455554444444322
Q ss_pred ccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccC
Q 037042 377 LKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSN 456 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 456 (1002)
.+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++
T Consensus 264 --------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 264 --------------EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp --------------CTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred --------------ChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 233455556666666666666666666666666666666666666655555556666666666666
Q ss_pred CcCC
Q 037042 457 NKLS 460 (1002)
Q Consensus 457 N~l~ 460 (1002)
|.+.
T Consensus 330 N~l~ 333 (477)
T 2id5_A 330 NPLA 333 (477)
T ss_dssp SCEE
T ss_pred CCcc
Confidence 6654
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=349.22 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=202.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|...+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~l 83 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT----HYYL 83 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS----EEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC----EEEE
Confidence 457889999999999999999865 79999999998665445567889999999999999999999998766 5579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~ 860 (1002)
||||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp EECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 999999999999987654 4899999999999999999999 8999999999999999 78899999999999754
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..... +..+
T Consensus 160 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~--------i~~~ 222 (304)
T 2jam_A 160 QNGI----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-----KLFEK--------IKEG 222 (304)
T ss_dssp CCBT----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH--------HHHC
T ss_pred CCCc----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHH--------HHcC
Confidence 4321 12345889999999999999999999999999999999999999763221 11111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... ......+..+.+++.+||..+|++|||+.|+++|-+
T Consensus 223 ~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 223 YYEFES----PFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp CCCCCT----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CCCCCc----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 100000 001224567899999999999999999999998755
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=357.50 Aligned_cols=267 Identities=21% Similarity=0.245 Sum_probs=196.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...... ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999986 469999999986432 33456788999999999999999999998765321 11
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+ +++|.+++... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 247999999 88999999763 4899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hh-h
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SI-M 935 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~-~ 935 (1002)
.... .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.......... .. .
T Consensus 178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHH
T ss_pred cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 5432 244578999999998776 679999999999999999999999997642211 111111100000 00 0
Q ss_pred hcc--------c--CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 936 KIV--------D--GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 936 ~i~--------~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.+. . +....... . ......+..+.+++.+||..||++|||+.|+++|-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp 309 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDF-A-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCG-G-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HhhhHHHHHHHHhCCCCCCCCH-H-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence 000 0 00000000 0 00122356789999999999999999999999983
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=356.56 Aligned_cols=283 Identities=18% Similarity=0.175 Sum_probs=205.6
Q ss_pred cCHHHHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccc-----------hhHHHHHHHHHHHHhccCCCc
Q 037042 696 FSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG-----------RAFKSFDVECEVMKSIRHRNI 764 (1002)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~ni 764 (1002)
....++....++|+..+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 345677788899999999999999999999988899999999864321 123778999999999999999
Q ss_pred ceeeeEEecCch-hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee
Q 037042 765 IKIISCCSIGDF-KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL 843 (1002)
Q Consensus 765 v~~~~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl 843 (1002)
+++++++...+. .....++||||++ |+|.+++...+..+++..+..++.||+.||+||| +.+|+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 999999865331 1123479999997 6999988877667999999999999999999999 8899999999999999
Q ss_pred CCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccH
Q 037042 844 GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922 (1002)
Q Consensus 844 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~ 922 (1002)
+.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~ 243 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QL 243 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HH
T ss_pred cCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HH
Confidence 999999999999997544332 2234568999999998776 678999999999999999999999997642211 11
Q ss_pred HHHHHHHHhhh-----------hhhcccCccC-ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 923 KHWVNDWLLIS-----------IMKIVDGSLL-SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 923 ~~~~~~~~~~~-----------~~~i~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
........... .......... .............+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 11111000000 0000000000 0000011112234567899999999999999999999999843
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=352.43 Aligned_cols=270 Identities=23% Similarity=0.325 Sum_probs=201.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~ 99 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK----RW 99 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC----EE
Confidence 467999999999999999999865 589999999865432 33566789999999999999999999998766 45
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++++|.++....+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 100 ~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 100 YLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 79999999999988876544 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH-----------H
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND-----------W 929 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~-----------~ 929 (1002)
.... ......||..|+|||++.+. .++.++||||+||++|||++|+.||........ ....... +
T Consensus 176 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 252 (331)
T 4aaa_A 176 APGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELF 252 (331)
T ss_dssp ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHH
T ss_pred CCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHh
Confidence 4322 22345789999999988775 689999999999999999999999976432211 1111110 0
Q ss_pred Hhhh-hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 930 LLIS-IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 930 ~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... ......+......... .....++..+.+++.+||+.||++|||++|+++|-+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 309 (331)
T 4aaa_A 253 NKNPVFAGVRLPEIKEREPLE-RRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309 (331)
T ss_dssp HHCGGGTTCCCCCCSSCCCHH-HHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred hhccccccccCccccccchhh-hcccchhHHHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 0000 0111111111111111 111235677999999999999999999999998743
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=347.96 Aligned_cols=262 Identities=26% Similarity=0.365 Sum_probs=199.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--CCc--EEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--DGM--EVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|+..+.||+|+||+||+|++. +++ .||||+++.. .....+.+.+|++++++++||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC--
Confidence 357899999999999999999853 333 6899998754 2345678899999999999999999999997654
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
.++|+||+++|+|.+++...+..+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 95 ---~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 95 ---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp ---CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred ---ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccc
Confidence 46999999999999999876667899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 858 KLLTREDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 858 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
.......... ......+|..|+|||+..+..++.++|||||||++|||++ |+.||...... .....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~------- 236 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILHK------- 236 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH-------
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HHHHH-------
Confidence 8775543322 2234567888999999988889999999999999999999 99999764221 11111
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
+........ .+..++..+.+++.+||..+|++|||+.+++++|+++...+.
T Consensus 237 -~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 237 -IDKEGERLP------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp -HHTSCCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred -HHccCCCCC------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 111000000 012345678999999999999999999999999999876543
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=354.81 Aligned_cols=271 Identities=21% Similarity=0.238 Sum_probs=196.8
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
..++|++.+.||+|+||+||+|+.. +++.||||+++... ......+.+|++++++++||||+++++++...+ .
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 107 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH----R 107 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT----E
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC----E
Confidence 4568999999999999999999854 78999999997543 223456778999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee-----CCCCcEEEeccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL-----GDNMVAHLSDFG 855 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl-----~~~~~~kl~DfG 855 (1002)
.++||||+++ +|.+++..... +++..+..++.||+.||+||| +++|+||||||+||++ +.++.+||+|||
T Consensus 108 ~~lv~e~~~~-~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 108 LHLIFEYAEN-DLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEEEECCSE-EHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEEEecCCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 6799999975 99999977654 899999999999999999999 8999999999999999 455669999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh-
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS- 933 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~- 933 (1002)
+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .+...........
T Consensus 183 ~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~ 259 (329)
T 3gbz_A 183 LARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDD 259 (329)
T ss_dssp HHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCT
T ss_pred CccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCch
Confidence 9987653322 22445689999999998774 48999999999999999999999997642211 1111111100000
Q ss_pred --hhhcc-----cCcc--CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 --IMKIV-----DGSL--LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 --~~~i~-----~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..... .... ..........+......+.+++.+||++||++|||++|+++|-+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 321 (329)
T 3gbz_A 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321 (329)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence 00000 0000 00011111222234577899999999999999999999999865
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=351.40 Aligned_cols=267 Identities=17% Similarity=0.213 Sum_probs=203.8
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++... ..+.+.+|++++++++ ||||+++++++...... ..+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~--~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSR--TPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC--CEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCC--ceE
Confidence 35799999999999999999985 57899999998753 3467889999999997 99999999999763221 446
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~ 861 (1002)
+||||+++++|.+++.. +++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||+++...
T Consensus 110 lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 99999999999999853 788999999999999999999 89999999999999999776 89999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||.........+................+.
T Consensus 183 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 183 PGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 4432 234578999999998876 668999999999999999999999996543332222222221111111111000
Q ss_pred cc-----------------CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SL-----------------LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~-----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. ..............+..+.+++.+||++||++|||++|+++|-+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~ 322 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGG
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCcc
Confidence 00 00000000111224577899999999999999999999998744
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=346.58 Aligned_cols=257 Identities=24% Similarity=0.376 Sum_probs=203.8
Q ss_pred hcCCCCCc-eeeccCcceEEEEEe---CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENN-LIGRGGFGSVYKARI---QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
..+|+..+ .||+|+||+||+|.+ .+++.||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 90 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---- 90 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS----
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCC----
Confidence 35677777 999999999999964 247889999997543 33467899999999999999999999999443
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++++|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 91 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 91 -SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp -SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred -CcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 3469999999999999998754 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 859 LLTREDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 859 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..... +.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~-----~~- 234 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAM-----LE- 234 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHH-----HH-
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHH-----HH-
Confidence 775543322 2233456788999999988889999999999999999999 99999764221 11110 00
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++||++.|+++.|+++-.
T Consensus 235 --~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 235 --KGERMG-------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp --TTCCCC-------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --cCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 000000 112345678999999999999999999999999998753
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-38 Score=369.10 Aligned_cols=253 Identities=21% Similarity=0.284 Sum_probs=203.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|++.+.||+|+||+||+|+.. +++.||||++.+.. ......+.+|++++++++||||+++++++.... ..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~ 96 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----SF 96 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC----EE
Confidence 457999999999999999999865 78999999986432 234577899999999999999999999998766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~ 858 (1002)
++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||+++
T Consensus 97 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 79999999999999887654 4899999999999999999999 89999999999999995 56789999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....||+.|+|||++.+ .|+.++||||+||++|||++|+.||...... +.... +.
T Consensus 173 ~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~--------i~ 235 (486)
T 3mwu_A 173 CFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----DILKR--------VE 235 (486)
T ss_dssp TBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HH
T ss_pred ECCCCCc---cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HH
Confidence 7654332 245579999999999865 5899999999999999999999999763221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+....... ....++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 236 ~~~~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 279 (486)
T 3mwu_A 236 TGKYAFDLP----QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (486)
T ss_dssp HTCCCSCSG----GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred hCCCCCCCc----ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence 111111000 11234567889999999999999999999999855
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-39 Score=365.04 Aligned_cols=245 Identities=14% Similarity=0.123 Sum_probs=189.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc---cchhHHHHHHHHH---HHHhccCCCcceee-------eE
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ---CGRAFKSFDVECE---VMKSIRHRNIIKII-------SC 770 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~~ 770 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|++ .+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45688899999999999999985 56999999999743 3345678899994 55556899999998 55
Q ss_pred EecCch----------hh---HHHHHhhccCCCCChhHhhhccCC------cCCHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 037042 771 CSIGDF----------KA---LFKALALEYMPHGSLEKYLYSSNY------ILDIFQRLNIMIDVASALEYLYFGYSTPV 831 (1002)
Q Consensus 771 ~~~~~~----------~~---~~~~lv~e~~~~g~L~~~l~~~~~------~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 831 (1002)
+...+. .. ...++||||+ +|+|.+++...+. .+++..++.|+.||++||+||| +++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 544321 00 0146999999 6899999986432 2335788889999999999999 8999
Q ss_pred EEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCC-----------CcCcccchHHHHH
Q 037042 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-----------RVSTNGDVYNFGV 900 (1002)
Q Consensus 832 iHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGv 900 (1002)
+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986432 2234567 899999998877 8999999999999
Q ss_pred HHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHH
Q 037042 901 MLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKE 980 (1002)
Q Consensus 901 ~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~e 980 (1002)
++|||++|+.||........ ...+.... ..++..+.+++.+||+.||++|||+.|
T Consensus 302 il~elltg~~Pf~~~~~~~~-------------~~~~~~~~------------~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGG-------------SEWIFRSC------------KNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHSSCCC------CC-------------SGGGGSSC------------CCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHCCCCCcccccccc-------------hhhhhhhc------------cCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 99999999999976432211 11111110 123466889999999999999999999
Q ss_pred HHHH
Q 037042 981 IVTR 984 (1002)
Q Consensus 981 vl~~ 984 (1002)
+++|
T Consensus 357 ~l~h 360 (377)
T 3byv_A 357 AMET 360 (377)
T ss_dssp HHTS
T ss_pred HhhC
Confidence 9985
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-38 Score=354.61 Aligned_cols=262 Identities=20% Similarity=0.273 Sum_probs=204.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~ 107 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG----EIS 107 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT----EEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC----EEE
Confidence 357999999999999999999865 68999999997653 344577899999999999999999999998766 467
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
+||||+++|+|.+++...+ .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||++....
T Consensus 108 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 9999999999999997765 4899999999999999999999 64 89999999999999999999999999997654
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh----------
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL---------- 931 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~---------- 931 (1002)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .........
T Consensus 184 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3eqc_A 184 DSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--ELMFGCQVEGDAAETPPRP 257 (360)
T ss_dssp HHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH--HHHHC--------------
T ss_pred ccc----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhcccccccCCCCCCCc
Confidence 322 1345789999999999999999999999999999999999999976432211 000000000
Q ss_pred ---h--------------h----hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 ---I--------------S----IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 ---~--------------~----~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. . ...+....... ......+..+.+++.+||+.||++|||++|+++|-+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 258 RTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPK------LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp ----------------CCCHHHHHHHHHHSCCCC------CCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred ccCCCcccccccCCCCcccchhhhhHHhccCCCC------CCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 0 0 00000000000 001123457899999999999999999999999855
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=353.25 Aligned_cols=262 Identities=23% Similarity=0.278 Sum_probs=191.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCch----hh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDF----KA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~----~~ 778 (1002)
..+|+..+.||+|+||.||+|+.. +++.||||++..........+.+|+.+++++. ||||+++++++..+.. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 357899999999999999999864 68999999987766666778899999999996 9999999999853321 11
Q ss_pred HHHHHhhccCCCCChhHhhhc--cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeCCCCcEEEecc
Q 037042 779 LFKALALEYMPHGSLEKYLYS--SNYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
...++||||++ |+|.+++.. ....+++..++.++.||+.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 13479999996 699998865 3346899999999999999999999 788 999999999999999999999999
Q ss_pred cccccccCCCcee----------eeccCCCCccccccccc---CCCCcCcccchHHHHHHHHHHHhCCCCCccccccccc
Q 037042 855 GITKLLTREDQFV----------TQTQTPATIGYMALEYG---SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT 921 (1002)
Q Consensus 855 Gla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~ 921 (1002)
|+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 9998765432211 11234589999999987 56678999999999999999999999996532211
Q ss_pred HHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 922 LKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
+......... ....+..+.+++.+||+.+|++|||+.|++++|+++.....
T Consensus 261 ---------------~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 ---------------IVNGKYSIPP------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp --------------------CCCCT------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ---------------hhcCcccCCc------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 1111100000 01122447889999999999999999999999999986543
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=362.21 Aligned_cols=259 Identities=11% Similarity=0.071 Sum_probs=184.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc---hhHHHHHHHHHHHHhc--cCCCcceee-------eEEe
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---RAFKSFDVECEVMKSI--RHRNIIKII-------SCCS 772 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~ 772 (1002)
..|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999865 789999999987532 3456677886555555 699988755 3333
Q ss_pred cCchhh-------------HHHHHhhccCCCCChhHhhhccCCcCCHHHH------HHHHHHHHHHHHHHHcCCCCCcEE
Q 037042 773 IGDFKA-------------LFKALALEYMPHGSLEKYLYSSNYILDIFQR------LNIMIDVASALEYLYFGYSTPVIH 833 (1002)
Q Consensus 773 ~~~~~~-------------~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~iiH 833 (1002)
...... ...++||||++ |+|.+++...+..+++..+ ..++.||++||+||| +++|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 222100 12479999998 8999999875444555566 788899999999999 899999
Q ss_pred ccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCC
Q 037042 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKP 911 (1002)
Q Consensus 834 rDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P 911 (1002)
|||||+|||++.++.+||+|||+|+...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998664321 14456799999999887 6799999999999999999999999
Q ss_pred CcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 912 TNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
|.......... | ................ ....++..+.+++.+||+.||++|||+.|+++|-
T Consensus 293 f~~~~~~~~~~--~----~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 354 (371)
T 3q60_A 293 FGLVTPGIKGS--W----KRPSLRVPGTDSLAFG------SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETP 354 (371)
T ss_dssp TTBCCTTCTTC--C----CBCCTTSCCCCSCCCT------TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSH
T ss_pred CCCcCcccccc--h----hhhhhhhccccccchh------hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCH
Confidence 98753321100 0 0000000000010000 1123456789999999999999999999999763
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=349.32 Aligned_cols=254 Identities=23% Similarity=0.298 Sum_probs=200.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|++.+.||+|+||+||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...+ ..++
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~l 93 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG----KLWI 93 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-----CEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC----eEEE
Confidence 467999999999999999999875 58999999997665556788999999999999999999999998765 5579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++++|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 94 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 99999999999998876667999999999999999999999 899999999999999999999999999998643321
Q ss_pred CceeeeccCCCCccccccccc-----CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 864 DQFVTQTQTPATIGYMALEYG-----SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
.. ......||..|+|||++ ....++.++|||||||++|||++|+.||...... ..... +....
T Consensus 171 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~-----~~~~~ 238 (302)
T 2j7t_A 171 LQ--KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLK-----IAKSD 238 (302)
T ss_dssp HH--C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH-----HHHSC
T ss_pred cc--ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHHH-----HhccC
Confidence 11 11335689999999987 4667899999999999999999999999764221 11111 00000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.+... .+..++..+.+++.+||+.+|++|||+.|+++|-
T Consensus 239 ~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 239 PPTLL--------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp CCCCS--------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred CcccC--------CccccCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 00000 1122346788999999999999999999999863
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-38 Score=349.93 Aligned_cols=251 Identities=18% Similarity=0.259 Sum_probs=206.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
..+|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 115 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----F 115 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC----e
Confidence 457899999999999999999865 58899999987542 234577889999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++...+ .+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 116 ~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 116 VFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 679999999999999987654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......||..|+|||++.+..++.++|||||||++|||++|+.||...... +.... +...
T Consensus 192 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~--------~~~~ 256 (335)
T 2owb_A 192 EYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLR--------IKKN 256 (335)
T ss_dssp CSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH--------HHHT
T ss_pred ccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-----HHHHH--------HhcC
Confidence 53322 223457899999999998888999999999999999999999999753211 11111 1011
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... +..+...+.+++.+||+.||++|||+.|+++|-+
T Consensus 257 ~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~ 294 (335)
T 2owb_A 257 EYSI--------PKHINPVAASLIQKMLQTDPTARPTINELLNDEF 294 (335)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred CCCC--------CccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 1100 1123456889999999999999999999999865
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=354.82 Aligned_cols=272 Identities=21% Similarity=0.222 Sum_probs=200.5
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-----hhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-----RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
..++|+..+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 85 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS-- 85 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--
Confidence 4568999999999999999999865 689999999874321 12346788999999999999999999997665
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..++||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 86 --~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 86 --NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp --CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred --ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 56799999986 899998877667888999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh-
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM- 935 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~- 935 (1002)
+....... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||...... ..+.............
T Consensus 160 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 160 KSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQ 236 (346)
T ss_dssp STTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTT
T ss_pred eeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhh
Confidence 87654332 22456789999999988654 5899999999999999999999998764221 1111111111000000
Q ss_pred -----hcccCccCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 -----KIVDGSLLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 -----~i~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...+..... ...........++..+.+++.+||..||++|||+.|+++|-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 000000000 000000011234567999999999999999999999999866
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=350.35 Aligned_cols=257 Identities=31% Similarity=0.508 Sum_probs=202.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcE--EEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGME--VAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||.||+|+.. ++.. ||||++.... ....+.+.+|+++++++ +||||+++++++...+ .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----~ 100 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----Y 100 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT----E
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC----c
Confidence 57899999999999999999854 5664 4999887532 33456788999999999 8999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC
Q 037042 781 KALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~ 845 (1002)
.++||||+++|+|.+++...+ ..+++..++.++.||++||+||| +++|+||||||+||+++.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~ 177 (327)
T 1fvr_A 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGE 177 (327)
T ss_dssp EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECG
T ss_pred eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcC
Confidence 679999999999999997654 36899999999999999999999 899999999999999999
Q ss_pred CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHH
Q 037042 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~ 924 (1002)
++.+||+|||+++...... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 178 ~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~ 249 (327)
T 1fvr_A 178 NYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----E 249 (327)
T ss_dssp GGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----H
T ss_pred CCeEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----H
Confidence 9999999999997433211 1233456888999999988889999999999999999998 99999763221 1
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
... .+....... .+..++..+.+++.+||..+|++|||+.|++++|+++....
T Consensus 250 ~~~--------~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 250 LYE--------KLPQGYRLE-------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp HHH--------HGGGTCCCC-------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHH--------HhhcCCCCC-------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 111 111110000 01123467899999999999999999999999999876543
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=370.08 Aligned_cols=253 Identities=20% Similarity=0.298 Sum_probs=199.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+.. ++..||||++.+.. ......+.+|+.++++++||||+++++++.... ..
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~ 111 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR----NY 111 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS----EE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----EE
Confidence 346999999999999999999865 68999999997543 234577889999999999999999999998766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~ 858 (1002)
++||||+++|+|.+++.... .+++..+..++.||++||+||| +++|+||||||+||+++. ++.+||+|||+++
T Consensus 112 ~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 112 YLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 79999999999999887654 4899999999999999999999 899999999999999975 4569999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....||+.|+|||++. +.|+.++||||+||++|||++|+.||...... +.... +.
T Consensus 188 ~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~--------i~ 250 (494)
T 3lij_A 188 VFENQKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-----EILRK--------VE 250 (494)
T ss_dssp ECBTTBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HH
T ss_pred ECCCCcc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HH
Confidence 7664432 24467999999999876 56999999999999999999999999764221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
......... ....++..+.+++.+||+++|.+|||+.|+++|-+
T Consensus 251 ~~~~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~ 294 (494)
T 3lij_A 251 KGKYTFDSP----EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294 (494)
T ss_dssp HTCCCCCSG----GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred hCCCCCCch----hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence 111111000 01224567889999999999999999999998733
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=378.80 Aligned_cols=250 Identities=25% Similarity=0.392 Sum_probs=198.7
Q ss_pred ceeeccCcceEEEEEeC---CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|.+. .++.||||+++... ....+.+.+|++++++++|||||++++++.... .++|||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~lv~E 449 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-----WMLVME 449 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-----EEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----EEEEEE
Confidence 47999999999999643 46889999997643 234678999999999999999999999996543 469999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..|+.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.+......
T Consensus 450 ~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 450 MAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp CCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred ccCCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999999997654 4899999999999999999999 899999999999999999999999999999877544322
Q ss_pred -eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 867 -VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 867 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... .... +..+....
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----~~~~--------i~~~~~~~ 592 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----VTAM--------LEKGERMG 592 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHH--------HHTTCCCC
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHH--------HHcCCCCC
Confidence 22234457889999999998899999999999999999998 999997643211 1111 11111000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.+..++..+.++|.+||+.+|++||++.+|++.|+++-.
T Consensus 593 -------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 -------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 112355779999999999999999999999999998753
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=368.45 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=203.5
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-------------hhHHHHHHHHHHHHhccCCCcceeee
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-------------RAFKSFDVECEVMKSIRHRNIIKIIS 769 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~ 769 (1002)
..++|++.++||+|+||+||+|+.. +++.||||++.+... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3568999999999999999999865 688999999875421 23567889999999999999999999
Q ss_pred EEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC--
Q 037042 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-- 847 (1002)
Q Consensus 770 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-- 847 (1002)
++.... ..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++
T Consensus 114 ~~~~~~----~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKK----YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSS----EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCC----EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCC
Confidence 998776 5679999999999999987654 4899999999999999999999 89999999999999998765
Q ss_pred -cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH
Q 037042 848 -VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 848 -~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~ 926 (1002)
.+||+|||+++....... .....||+.|+|||++. +.|+.++||||+||++|+|++|+.||...... +..
T Consensus 186 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~ 256 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-----DII 256 (504)
T ss_dssp SSEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH
T ss_pred ccEEEEECCCCEEcCCCCc---cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 699999999987755432 24457999999999876 46899999999999999999999999763221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. .+..+...... .....++..+.+++.+||.++|.+|||++|+++|-+
T Consensus 257 ~--------~i~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 257 K--------KVEKGKYYFDF----NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp H--------HHHHCCCCCCH----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred H--------HHHcCCCCCCc----cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 1 11111111111 111234567899999999999999999999999865
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=371.20 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=205.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++.+.. ......+.+|++++++++||||+++++++.... .
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~ 100 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG----Y 100 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----E
Confidence 356999999999999999999865 79999999986542 334678899999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEeccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGIT 857 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla 857 (1002)
.++||||+.+|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||++ +.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 101 FYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 679999999999999987655 4899999999999999999999 8999999999999999 56789999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
+.+..... .....||+.|+|||++.+ .|+.++||||+||++|||++|+.||...... +... .+
T Consensus 177 ~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~--------~i 239 (484)
T 3nyv_A 177 THFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-----DILK--------KV 239 (484)
T ss_dssp HHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HH
T ss_pred EEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-----HHHH--------HH
Confidence 87754432 234569999999998765 6899999999999999999999999763221 1111 11
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+....... ....++..+.+++.+||+++|++|||+.|+++|-+
T Consensus 240 ~~~~~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 240 EKGKYTFELP----QWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp HHCCCCCCSG----GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred HcCCCCCCCc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 1111111100 11234567889999999999999999999999865
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-38 Score=379.80 Aligned_cols=251 Identities=21% Similarity=0.261 Sum_probs=205.9
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 778 (1002)
..++|+..+.||+|+||.||+|+.. +++.||||++++.. ......+..|.+++..+ +||+|+++++++...+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--- 415 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 415 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS---
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC---
Confidence 3567999999999999999999865 68899999997542 23456778899999988 7999999999998766
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+
T Consensus 416 -~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 416 -RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred -EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceee
Confidence 5679999999999999998765 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||...... +. ...+.
T Consensus 491 ~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-----~~--------~~~i~ 555 (674)
T 3pfq_A 491 ENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----EL--------FQSIM 555 (674)
T ss_dssp ECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH--------HHHHH
T ss_pred ccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-----HH--------HHHHH
Confidence 6443322 234567999999999999999999999999999999999999999763221 11 11222
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTRL 985 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~L 985 (1002)
......+ ...+..+.+++.+||+.||++||++ +||++|-
T Consensus 556 ~~~~~~p--------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ 599 (674)
T 3pfq_A 556 EHNVAYP--------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 599 (674)
T ss_dssp SSCCCCC--------TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSG
T ss_pred hCCCCCC--------ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCc
Confidence 2222111 2245678999999999999999997 7888763
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=352.05 Aligned_cols=276 Identities=18% Similarity=0.245 Sum_probs=204.5
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh----
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK---- 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 777 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++......
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 45799999999999999999986 579999999986543 22346778999999999999999999998765421
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
....++||||+++ ++.+.+......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 1124699999975 888888776667999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCc--eeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--
Q 037042 858 KLLTREDQ--FVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI-- 932 (1002)
Q Consensus 858 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-- 932 (1002)
+.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ... +......
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~-i~~~~~~~~ 249 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LAL-ISQLCGSIT 249 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH-HHHHHCCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHH-HHHHhCCCC
Confidence 87653221 122345678999999998776 4589999999999999999999999976432211 111 1110000
Q ss_pred -hhh-hc-----ccCc----cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 -SIM-KI-----VDGS----LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 -~~~-~i-----~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... .+ .+.. ..................+.+++.+||+.||++|||++|+++|-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 000 00 0000 000000011111112456889999999999999999999999865
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=343.60 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=208.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.+.|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.... ..+
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 96 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT----KLW 96 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----eEE
Confidence 356889999999999999999854 68999999997543 345678999999999999999999999998765 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 97 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EEEECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999999753 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......||..|+|||++.+..++.++|||||||++|||++|+.||...... ..... +.+......
T Consensus 172 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~-----~~~~~~~~~ 239 (303)
T 3a7i_A 172 TQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLFL-----IPKNNPPTL 239 (303)
T ss_dssp TBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH-----HHHSCCCCC
T ss_pred ccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHHH-----hhcCCCCCC
Confidence 321 224457899999999999999999999999999999999999999753221 11110 000000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+..++..+.+++.+||+.+|++|||+.|+++|..-.+.
T Consensus 240 ----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 240 ----------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp ----------CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred ----------ccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 11234568899999999999999999999998765443
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-38 Score=339.53 Aligned_cols=250 Identities=26% Similarity=0.353 Sum_probs=196.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 85 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT----D 85 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC----e
Confidence 467999999999999999999865 79999999987542 234567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 86 FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 579999999999999997654 4899999999999999999999 889999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... .....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||..... ...... +..
T Consensus 162 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~--------~~~ 225 (276)
T 2h6d_A 162 SDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLFKK--------IRG 225 (276)
T ss_dssp CC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HHH
T ss_pred CCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHHH--------hhc
Confidence 54322 234568899999999887765 6899999999999999999999975321 111111 101
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..... +..++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 226 ~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~ 264 (276)
T 2h6d_A 226 GVFYI--------PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEW 264 (276)
T ss_dssp CCCCC--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred CcccC--------chhcCHHHHHHHHHHccCChhhCCCHHHHHhChh
Confidence 11000 1123456889999999999999999999999854
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-38 Score=357.30 Aligned_cols=269 Identities=22% Similarity=0.262 Sum_probs=198.9
Q ss_pred HhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh----
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK---- 777 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 777 (1002)
...++|+..+.||+|+||+||+|+. .+|+.||||++...... ..+|+++++.++||||+++++++......
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4567899999999999999999985 57999999998754322 24699999999999999999998654311
Q ss_pred ------------------------------hHHHHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHH
Q 037042 778 ------------------------------ALFKALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLY 824 (1002)
Q Consensus 778 ------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH 824 (1002)
..+.++||||++ |+|.+.+.. .+..+++..+..++.||++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 112468999998 487777653 3346899999999999999999999
Q ss_pred cCCCCCcEEccCCCCCeeeC-CCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHH
Q 037042 825 FGYSTPVIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVML 902 (1002)
Q Consensus 825 ~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l 902 (1002)
+.+|+||||||+||+++ .++.+||+|||+|+....... .....||..|+|||++.+. .++.++||||+||++
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 99999999999999997 689999999999987654432 2345689999999987764 489999999999999
Q ss_pred HHHHhCCCCCcccccccccHHHHHHHHHhh---hhhh-------cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCC
Q 037042 903 METFTGKKPTNEIFNEGMTLKHWVNDWLLI---SIMK-------IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESP 972 (1002)
Q Consensus 903 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~-------i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P 972 (1002)
|||++|+.||......+ .+...+...... .+.. ..-+... ........+..++..+.+++.+||+++|
T Consensus 233 ~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 233 GELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK-AKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCC-CCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccC-cccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 99999999997643221 122221111000 0000 0000000 1111222333456779999999999999
Q ss_pred CCCCCHHHHHHH
Q 037042 973 EKRINAKEIVTR 984 (1002)
Q Consensus 973 ~~Rpt~~evl~~ 984 (1002)
++|||+.|+++|
T Consensus 311 ~~R~t~~e~l~h 322 (383)
T 3eb0_A 311 DLRINPYEAMAH 322 (383)
T ss_dssp GGSCCHHHHHTS
T ss_pred hhCCCHHHHhcC
Confidence 999999999977
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=357.32 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=202.0
Q ss_pred cCCCCCceeeccCcceEEEEEe----CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 706 DGFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
++|+..+.||+|+||+||+|+. .+|+.||||++++.. ......+.+|+++++++ +||||+++++++...+
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 132 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET- 132 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc-
Confidence 5799999999999999999986 368999999986532 22345677899999999 6999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 133 ---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 ---KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp ---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred ---eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 4579999999999999997654 4899999999999999999999 88999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
++.+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+.....
T Consensus 206 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~---- 279 (355)
T 1vzo_A 206 SKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRIL---- 279 (355)
T ss_dssp EEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHH----
T ss_pred CeecccCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHh----
Confidence 9876433221 2234568999999999875 347899999999999999999999997543222 1222211110
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
..... .+..++..+.+++.+||..||++|| ++.|+++|..
T Consensus 280 ----~~~~~--------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 280 ----KSEPP--------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp ----HCCCC--------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred ----ccCCC--------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 00000 1122345688999999999999999 9999999865
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=340.50 Aligned_cols=254 Identities=24% Similarity=0.372 Sum_probs=199.4
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
++|.....||+|+||.||+|+. .+++.||||++........+.+.+|+.++++++||||+++++++...+ ..++|
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 97 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG----FIKIF 97 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT----EEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC----cEEEE
Confidence 3466667999999999999985 468899999998766666788999999999999999999999998766 45799
Q ss_pred hccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEeccccccccc
Q 037042 785 LEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDFGITKLLT 861 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~ 861 (1002)
|||+++++|.+++..... ..++..+..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 999999999999986533 4568888999999999999999 899999999999999987 8999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCC--cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGR--VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
.... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ ..... .... ..
T Consensus 175 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~----~~~~-~~ 244 (295)
T 2clq_A 175 GINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA---AMFKV----GMFK-VH 244 (295)
T ss_dssp C-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH---HHHHH----HHHC-CC
T ss_pred CCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH---HHHhh----cccc-cc
Confidence 4321 223457899999999876643 78999999999999999999999975322111 00000 0000 00
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+.. +..++..+.+++.+||+.+|++||++.|+++|-.
T Consensus 245 ~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~ 281 (295)
T 2clq_A 245 PEI----------PESMSAEAKAFILKCFEPDPDKRACANDLLVDEF 281 (295)
T ss_dssp CCC----------CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred ccc----------cccCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 111 1223467889999999999999999999998743
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=359.92 Aligned_cols=267 Identities=18% Similarity=0.220 Sum_probs=202.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhc------cCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI------RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 777 (1002)
..+|++.+.||+|+||+||+|+.. +++.||||++... ......+.+|+++++.+ .|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 457999999999999999999855 6899999999754 33456677888888887 4679999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc--EEEecc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV--AHLSDF 854 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~--~kl~Df 854 (1002)
..++||||+. ++|.+++..... .+++..+..++.||++||+||| +.+|+||||||+|||++.++. +||+||
T Consensus 173 --~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 173 --HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp --EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred --eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeec
Confidence 5689999996 599999877543 5899999999999999999999 889999999999999999887 999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI-- 932 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-- 932 (1002)
|+++...... ....||+.|+|||++.+..|+.++|||||||++|||++|+.||...... ..+..++......
T Consensus 247 G~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~-~~l~~i~~~~~~p~~ 320 (429)
T 3kvw_A 247 GSSCYEHQRV-----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG-DQLACMIELLGMPSQ 320 (429)
T ss_dssp TTCEETTCCC-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCH
T ss_pred ccceecCCcc-----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCCH
Confidence 9997654322 3457899999999999999999999999999999999999999764322 1122221110000
Q ss_pred h-------hhhcccCcc------------------------------CChhhhHHHhHHHHHHHHHHHHhHccccCCCCC
Q 037042 933 S-------IMKIVDGSL------------------------------LSREDIQFVAKEQCMSFVFNMAMECTVESPEKR 975 (1002)
Q Consensus 933 ~-------~~~i~~~~~------------------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 975 (1002)
. ....++... ..........+......+.+++.+||++||++|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~R 400 (429)
T 3kvw_A 321 KLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVR 400 (429)
T ss_dssp HHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhC
Confidence 0 000000000 000000111111224678999999999999999
Q ss_pred CCHHHHHHHHH
Q 037042 976 INAKEIVTRLL 986 (1002)
Q Consensus 976 pt~~evl~~L~ 986 (1002)
||++|+++|-+
T Consensus 401 pta~e~L~Hpw 411 (429)
T 3kvw_A 401 MTPGQALRHPW 411 (429)
T ss_dssp CCHHHHHTSTT
T ss_pred CCHHHHhCChh
Confidence 99999999855
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=358.55 Aligned_cols=271 Identities=20% Similarity=0.203 Sum_probs=201.8
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc--------CCCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR--------HRNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~ 775 (1002)
.++|++.++||+|+||+||+|+. .+++.||||++... ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36799999999999999999985 46899999999754 334577889999999996 788999999987432
Q ss_pred hhhHHHHHhhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCC------
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNM------ 847 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~------ 847 (1002)
......++||||+ ++++.+++... ...+++..++.++.||++||+||| ++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 2222567999999 55666655543 346899999999999999999999 77 999999999999999775
Q ss_pred -------------------------------------------cEEEecccccccccCCCceeeeccCCCCccccccccc
Q 037042 848 -------------------------------------------VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG 884 (1002)
Q Consensus 848 -------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 884 (1002)
.+||+|||+++..... .....||..|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 8999999999876532 2345789999999999
Q ss_pred CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccH-----HHHHHHHHh--------hhh-hhcccCc--cC-----
Q 037042 885 SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL-----KHWVNDWLL--------ISI-MKIVDGS--LL----- 943 (1002)
Q Consensus 885 ~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~-----~~~~~~~~~--------~~~-~~i~~~~--~~----- 943 (1002)
.+..++.++|||||||++|||++|+.||.......... ......... ... ....... ..
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 98899999999999999999999999997644322111 111000000 000 0000000 00
Q ss_pred Chhh------hHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 944 SRED------IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 944 ~~~~------~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.... .....+..+...+.+++.+||+.||++|||++|+++|-
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 393 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 393 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence 0000 00011345677899999999999999999999999874
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=362.52 Aligned_cols=263 Identities=17% Similarity=0.196 Sum_probs=206.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccC-CCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH-RNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.++||+|+||.||+|+. .+++.||||++..... ...+..|+++++.++| ++|..+..++...+ ..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~----~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGD----YNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETT----EEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCC----EEE
Confidence 46799999999999999999985 5799999999875432 2457889999999987 45555555555544 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~ 859 (1002)
+||||+ +++|.+++......+++..++.|+.||+.||+||| +++|+||||||+|||+ +.++.+||+|||+++.
T Consensus 80 lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999999 99999999876667999999999999999999999 8999999999999999 5889999999999987
Q ss_pred ccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 860 LTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 860 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
+....... ......||..|+|||++.+..++.++|||||||++|||++|+.||........ ...+........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~~ 233 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKKV 233 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHHH
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhccc
Confidence 76543211 12356799999999999999999999999999999999999999987433211 111111111100
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
... .......++.++.+++.+||..+|++||++.+|++.|+++-.
T Consensus 234 ~~~-----------~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 234 ATS-----------IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HSC-----------HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred ccc-----------HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000 000112345679999999999999999999999999998853
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=344.66 Aligned_cols=254 Identities=24% Similarity=0.298 Sum_probs=201.6
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..++|+..+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|++++++++||||+++++++...+ ..+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 100 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT----DLW 100 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT----EEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC----EEE
Confidence 3567999999999999999999865 58999999997643 3467889999999999999999999998765 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 101 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp EEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred EEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 999999999999999765567999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......||..|+|||++.+..++.++|||||||++|||++|+.||....... .. .. .........
T Consensus 178 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~-~~-----~~~~~~~~~ 245 (314)
T 3com_A 178 TMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR----AI-FM-----IPTNPPPTF 245 (314)
T ss_dssp TBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH----HH-HH-----HHHSCCCCC
T ss_pred hcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH----HH-HH-----HhcCCCccc
Confidence 322 2234578999999999999899999999999999999999999997532211 00 00 000000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. .+...+..+.+++.+||..+|.+|||+.|+++|-+
T Consensus 246 ~--------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~ 281 (314)
T 3com_A 246 R--------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281 (314)
T ss_dssp S--------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred C--------CcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence 0 01223467889999999999999999999998754
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-38 Score=348.53 Aligned_cols=257 Identities=19% Similarity=0.243 Sum_probs=201.8
Q ss_pred HhhcCCCCC-ceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchh
Q 037042 703 QATDGFSEN-NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 703 ~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 777 (1002)
...++|.+. +.||+|+||+||+|+.. +++.||||++.... ......+.+|+.+++++. ||||+++++++...+
T Consensus 25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~-- 102 (327)
T 3lm5_A 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS-- 102 (327)
T ss_dssp HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--
T ss_pred hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--
Confidence 344567776 88999999999999865 69999999987543 234578899999999994 699999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEec
Q 037042 778 ALFKALALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSD 853 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~D 853 (1002)
..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++. ++.+||+|
T Consensus 103 --~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 103 --EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp --EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred --eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEee
Confidence 467999999999999998654 346899999999999999999999 899999999999999987 78999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...
T Consensus 178 fg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-----~~~----- 244 (327)
T 3lm5_A 178 FGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-----YLN----- 244 (327)
T ss_dssp GGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HHH-----
T ss_pred CccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-----HHH-----
Confidence 999987654332 2345789999999999999999999999999999999999999976322111 000
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+..... ..... ....++..+.+++.+||+.+|++|||++|+++|-+
T Consensus 245 i~~~~~-~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~ 290 (327)
T 3lm5_A 245 ISQVNV-DYSEE------TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSW 290 (327)
T ss_dssp HHHTCC-CCCTT------TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred HHhccc-ccCch------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence 011000 00000 01224567889999999999999999999999865
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=352.17 Aligned_cols=271 Identities=19% Similarity=0.170 Sum_probs=194.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+.. ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 467999999999999999999854 68999999997542 33456788999999999999999999998765411 11
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++ +|.+++.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 34799999975 78888753 3789999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH-------Hh-
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW-------LL- 931 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~-------~~- 931 (1002)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ +...+... ..
T Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTT
T ss_pred ccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHH
Confidence 65332 22345789999999999998999999999999999999999999976422110 00000000 00
Q ss_pred --hhhhhccc--CccCChh----------hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 --ISIMKIVD--GSLLSRE----------DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 --~~~~~i~~--~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
........ +...... ..........+..+.+++.+||..||++|||++|+++|-+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 00000000 0000000 0000112334678999999999999999999999999864
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=343.70 Aligned_cols=260 Identities=20% Similarity=0.273 Sum_probs=203.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...... ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~--~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT--TL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGT--EE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCc--eE
Confidence 457999999999999999999865 68999999997542 33457789999999999999999999987543221 45
Q ss_pred HHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCC-----cEEccCCCCCeeeCCCCcEEEec
Q 037042 782 ALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTP-----VIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 79999999999999997642 24899999999999999999999 666 99999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++........ .....||..|+|||++.+..++.++||||||+++|||++|+.||...... ......
T Consensus 160 fg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~i---- 228 (279)
T 2w5a_A 160 FGLARILNHDTSF--AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-----ELAGKI---- 228 (279)
T ss_dssp CCHHHHC---CHH--HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHH----
T ss_pred Cchheeecccccc--ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-----HHHHHH----
Confidence 9999876543221 12345889999999998888999999999999999999999999764221 111111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..+.... .+..++..+.+++.+||+.+|++||++.|++++++.-...
T Consensus 229 ----~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 229 ----REGKFRR-------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp ----HHTCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred ----hhccccc-------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 1111000 0112346789999999999999999999999988754443
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=354.58 Aligned_cols=269 Identities=21% Similarity=0.226 Sum_probs=185.3
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...... ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999985 478999999986532 33456788999999999999999999998654211 11
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|+||+ +++|.+++... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 347999999 78999998763 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--h-hh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--S-IM 935 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~-~~ 935 (1002)
.... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+.......... . +.
T Consensus 182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHT
T ss_pred cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 5432 234578999999998876 67899999999999999999999999764221 1111111110000 0 00
Q ss_pred hcc--------cCccC-ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIV--------DGSLL-SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~--------~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+. ..... ....... .....+..+.+++.+||..||++|||+.|+++|-.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~ 314 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHH-HTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HhhhHHHHHHHhccCCCCCCCHHH-HCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence 000 00000 0000000 01123467899999999999999999999999844
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=339.61 Aligned_cols=256 Identities=20% Similarity=0.267 Sum_probs=201.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-- 81 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ-- 81 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC--
Confidence 468999999999999999999864 68999999997542 23457789999999999999999999998543311
Q ss_pred HHHHhhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||++++ +.+++... ...+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||++.
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence 347999999886 77766553 346899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCC--cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGR--VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
...............||..|+|||+..+.. ++.++||||+||++|||++|+.||.... ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i------- 225 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFENI------- 225 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHH-------
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHH-------
Confidence 765433333334567899999999887643 4789999999999999999999997532 11111111
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
....... +..++..+.+++.+||..||++|||+.|+++|-+-
T Consensus 226 -~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~ 267 (305)
T 2wtk_C 226 -GKGSYAI--------PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267 (305)
T ss_dssp -HHCCCCC--------CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHH
T ss_pred -hcCCCCC--------CCccCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence 1111100 11234668899999999999999999999998553
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=351.56 Aligned_cols=275 Identities=20% Similarity=0.205 Sum_probs=204.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh-hHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK-ALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 781 (1002)
..+|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...... ....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 467999999999999999999854 68899999997543 33457788999999999999999999998765311 1134
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||++ |+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 79999997 5999998764 3899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCcee-eeccCCCCcccccccccC-CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh---hhh
Q 037042 862 REDQFV-TQTQTPATIGYMALEYGS-EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS---IMK 936 (1002)
Q Consensus 862 ~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~ 936 (1002)
...... ......||+.|+|||++. ...++.++||||+||++|||++|+.||....... .+........... ...
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 258 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNC 258 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHHT
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHH
Confidence 432211 123457999999999754 4558999999999999999999999997643221 1111111100000 000
Q ss_pred ccc--------CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 937 IVD--------GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 937 i~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+.+ ................++..+.+++.+||++||++|||+.|+++|-+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 000 00000000000011224567899999999999999999999999854
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=340.19 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=203.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---------chhHHHHHHHHHHHHhcc-CCCcceeeeEEec
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---------GRAFKSFDVECEVMKSIR-HRNIIKIISCCSI 773 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 773 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999865 68999999997542 123466788999999995 9999999999987
Q ss_pred CchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 774 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
.. ..++||||+++++|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 96 ~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 96 NT----FFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp SS----EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECC
T ss_pred CC----eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEec
Confidence 66 5679999999999999997654 4899999999999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccC------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGS------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
||++........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ....
T Consensus 168 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~ 239 (298)
T 1phk_A 168 FGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-----LMLR 239 (298)
T ss_dssp CTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH
T ss_pred ccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-----HHHH
Confidence 999987654432 23456899999999864 456899999999999999999999999653211 1111
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. +.......... .....+..+.+++.+||+.+|++|||+.|+++|-.
T Consensus 240 ~--------~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 286 (298)
T 1phk_A 240 M--------IMSGNYQFGSP----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286 (298)
T ss_dssp H--------HHHTCCCCCTT----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred H--------HhcCCcccCcc----cccccCHHHHHHHHHHccCCcccCCCHHHHHhChH
Confidence 1 11111000000 01234567899999999999999999999998744
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=338.02 Aligned_cols=246 Identities=20% Similarity=0.277 Sum_probs=198.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+|+..+.++ +||||+++++++...+ .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~----~ 85 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD----H 85 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT----E
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC----e
Confidence 457999999999999999999865 79999999987542 33457788899999999 9999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-----------
Q 037042 781 KALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN----------- 846 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~----------- 846 (1002)
.++||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+||||||+||+++.+
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~ 162 (289)
T 1x8b_A 86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGD 162 (289)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-------------
T ss_pred EEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccc
Confidence 679999999999999997642 35899999999999999999999 8999999999999999844
Q ss_pred --------CcEEEecccccccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCccccc
Q 037042 847 --------MVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFN 917 (1002)
Q Consensus 847 --------~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~ 917 (1002)
..+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|||++|.+|+.....
T Consensus 163 ~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 236 (289)
T 1x8b_A 163 EDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236 (289)
T ss_dssp -------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH
T ss_pred cccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH
Confidence 479999999998765432 24589999999998766 567899999999999999999987644210
Q ss_pred ccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 918 EGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. .+....... .+..++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 237 ----~~------------~~~~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 282 (289)
T 1x8b_A 237 ----WH------------EIRQGRLPR-------IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSV 282 (289)
T ss_dssp ----HH------------HHHTTCCCC-------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTT
T ss_pred ----HH------------HHHcCCCCC-------CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChH
Confidence 00 111111100 01123467899999999999999999999998743
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=343.75 Aligned_cols=253 Identities=21% Similarity=0.254 Sum_probs=185.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++..... .....+..+...++.++||||+++++++...+ ..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~----~~ 81 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG----DV 81 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----SE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC----CE
Confidence 46799999999999999999986 4799999999975432 22333444555678889999999999998766 56
Q ss_pred HHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 782 ALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
++||||+++ +|.+++.. ....+++..+..++.|++.|++||| ++ +|+||||||+||+++.++.+||+|||++
T Consensus 82 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T 3fme_A 82 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157 (290)
T ss_dssp EEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC---
T ss_pred EEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCc
Confidence 799999974 88877754 3446999999999999999999999 76 9999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCccccccccc----CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYG----SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
+....... .....||+.|+|||++ .+..++.++||||+||++|||++|+.||............
T Consensus 158 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--------- 225 (290)
T 3fme_A 158 GYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ--------- 225 (290)
T ss_dssp ---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH---------
T ss_pred cccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH---------
Confidence 87654322 2334689999999985 5667899999999999999999999999753222111111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.......... ....+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 226 ---~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 226 ---VVEEPSPQLP------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp ---HHHSCCCCCC------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred ---HhccCCCCcc------cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 1111000000 1123456899999999999999999999998744
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=347.82 Aligned_cols=264 Identities=22% Similarity=0.284 Sum_probs=185.6
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
..++|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~ 88 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD----EL 88 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS----CE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC----Cc
Confidence 356899999999999999999985 468999999986542 334567889999999999999999999998776 45
Q ss_pred HHhhccCCCCChhHhhhc-------cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 782 ALALEYMPHGSLEKYLYS-------SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
++||||+++|+|.+++.. ....+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEec
Confidence 799999999999999874 2345899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCce---eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 855 GITKLLTREDQF---VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 855 Gla~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
|++......... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .... .
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~-~ 240 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV----LMLT-L 240 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH----HHHH-H
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH----HHHH-h
Confidence 999876543211 11234568999999998765 5689999999999999999999999976432211 0000 0
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
......... ..........++..+.+++.+||+.||++|||+.|+++|-
T Consensus 241 ~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 289 (303)
T 2vwi_A 241 QNDPPSLET------GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK 289 (303)
T ss_dssp TSSCCCTTC-----------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred ccCCCcccc------ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 000000000 0000000112345688999999999999999999999873
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=349.36 Aligned_cols=265 Identities=18% Similarity=0.255 Sum_probs=204.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccch-----------------hHHHHHHHHHHHHhccCCCccee
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR-----------------AFKSFDVECEVMKSIRHRNIIKI 767 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~E~~~l~~l~h~niv~~ 767 (1002)
.++|++.+.||+|+||.||+|+. +|+.||||++...... ..+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999998 8999999998743211 11789999999999999999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHh------hhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCC
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKY------LYSS-NYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPS 839 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~ 839 (1002)
++++...+ ..++||||+++|+|.++ +... ...+++..+..++.||+.||+||| + .+|+||||||+
T Consensus 109 ~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~ 181 (348)
T 2pml_X 109 EGIITNYD----EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPS 181 (348)
T ss_dssp SEEEESSS----EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGG
T ss_pred EEEEeeCC----eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChH
Confidence 99998776 56799999999999998 6543 346899999999999999999999 7 99999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCC-CcCc-ccchHHHHHHHHHHHhCCCCCccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVST-NGDVYNFGVMLMETFTGKKPTNEIFN 917 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGv~l~elltg~~P~~~~~~ 917 (1002)
||+++.++.+||+|||++...... ......||..|+|||+..+. .++. ++|||||||++|||++|+.||.....
T Consensus 182 Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 257 (348)
T 2pml_X 182 NILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257 (348)
T ss_dssp GEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred hEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 999999999999999999876543 22456789999999998877 6666 99999999999999999999976433
Q ss_pred ccccHHHHHHHHHhhhhhhcccCc-cCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 918 EGMTLKHWVNDWLLISIMKIVDGS-LLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.. +..............+.. ... ...........++..+.+++.+||+.+|++|||+.|+++|-
T Consensus 258 ~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 258 LV----ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp SH----HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred HH----HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 11 111111111000000000 000 00000001123456789999999999999999999999874
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=344.97 Aligned_cols=252 Identities=24% Similarity=0.308 Sum_probs=197.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--------chhHHHHHHHHHHHHhccCCCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--------GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1002)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457999999999999999999865 68999999986432 122345788999999999999999999987654
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEe
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLS 852 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~ 852 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+||+++.++. +||+
T Consensus 89 -----~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 89 -----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp -----EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred -----eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEc
Confidence 479999999999999987654 5899999999999999999999 899999999999999987654 9999
Q ss_pred cccccccccCCCceeeeccCCCCccccccccc---CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYG---SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
|||+++....... .....||+.|+|||++ ....++.++|||||||++|||++|+.||........ +...+.
T Consensus 160 Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~-- 233 (322)
T 2ycf_A 160 DFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQIT-- 233 (322)
T ss_dssp CCTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHH--
T ss_pred cCccceecccccc---cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHH--
Confidence 9999987654321 1234589999999986 356789999999999999999999999976433221 111111
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
........ .....++..+.+++.+||..||++|||+.|+++|
T Consensus 234 ---------~~~~~~~~----~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 ---------SGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp ---------HTCCCCCH----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---------hCccccCc----hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 01100000 0112345678999999999999999999999975
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=343.16 Aligned_cols=349 Identities=19% Similarity=0.186 Sum_probs=194.9
Q ss_pred cCCCCCCCCCc-ccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecc
Q 037042 32 KNWNSSISFCN-WTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGD 110 (1002)
Q Consensus 32 ~~w~~~~~~c~-w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 110 (1002)
++|.++.+||. |.+..|.....++ ............-..+++|+.|++++|.++...+..+.++++|++|+|++
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~ 78 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLND 78 (390)
T ss_dssp ---CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTT
T ss_pred CCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCC
Confidence 47988888875 5555554322122 22222212222233467888888888888743333467788888888888
Q ss_pred cccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccc
Q 037042 111 NQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAY 190 (1002)
Q Consensus 111 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 190 (1002)
|++. .+|...+..+++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++|++|+|++|++++
T Consensus 79 n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~-- 155 (390)
T 3o6n_A 79 LQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-- 155 (390)
T ss_dssp SCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB--
T ss_pred Cccc-ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCc--
Confidence 8877 4555555778888888888888887777777888888888888888874444446777888888888887764
Q ss_pred cchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccC
Q 037042 191 DHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVR 270 (1002)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 270 (1002)
..|..++.+++|++|++++|++++. .+..+++|+.|++++|.+++. ..
T Consensus 156 -----------------------~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~------~~ 203 (390)
T 3o6n_A 156 -----------------------IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL------AI 203 (390)
T ss_dssp -----------------------CCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE------EC
T ss_pred -----------------------cChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc------CC
Confidence 2345567777777777777777754 234455666666666655421 12
Q ss_pred CCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCC
Q 037042 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350 (1002)
Q Consensus 271 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~ 350 (1002)
.++|++|++++|++... |..+ .++|++|+|++|++++. ..+..+++|++|+|++|+++.+
T Consensus 204 ~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~--------------- 263 (390)
T 3o6n_A 204 PIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKI--------------- 263 (390)
T ss_dssp CSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEE---------------
T ss_pred CCcceEEECCCCeeeec-cccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCc---------------
Confidence 23455555555555432 2211 24455555555554432 2344444444444444444333
Q ss_pred CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEc
Q 037042 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 430 (1002)
.|..|..+++|++|+|++|++++ +|..+..+++|++|+|
T Consensus 264 ----------------------------------------~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 264 ----------------------------------------MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp ----------------------------------------ESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ----------------------------------------ChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 23344444455555555555543 2333444555555555
Q ss_pred cCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc
Q 037042 431 PDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS 485 (1002)
Q Consensus 431 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 485 (1002)
++|+++ .+|..+..+++|+.|+|++|+|+.. + +..+++|+.|++++|.+..
T Consensus 303 ~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 555555 3444444555555555555555532 1 4445555666666665543
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=350.26 Aligned_cols=269 Identities=19% Similarity=0.197 Sum_probs=198.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH--
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL-- 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~-- 779 (1002)
.++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467999999999999999999854 69999999997542 3345778899999999999999999999976652111
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||++ ++|.+++.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 1279999997 588888743 3899999999999999999999 88999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~ 936 (1002)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.......... ....
T Consensus 194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHT
T ss_pred cccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHH
Confidence 5432 234578999999998877 678999999999999999999999997642211 111111100000 0000
Q ss_pred cccC---------ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 937 IVDG---------SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 937 i~~~---------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... ...............++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 0000 0000000000011234577999999999999999999999999844
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-38 Score=348.18 Aligned_cols=261 Identities=22% Similarity=0.279 Sum_probs=197.7
Q ss_pred HHHhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh-
Q 037042 701 LCQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK- 777 (1002)
Q Consensus 701 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~- 777 (1002)
+....++|+..+.||+|+||.||+|+. .+|+.||||++.... .....+.+|+.+++++ +||||+++++++......
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 334567899999999999999999986 478999999987543 2346788999999999 799999999998763211
Q ss_pred -hHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 778 -ALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 778 -~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
....++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCc
Confidence 114579999999999999998653 36889999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
++........ ......||+.|+|||++. +..++.++|||||||++|||++|+.||........ ...
T Consensus 175 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~-- 245 (326)
T 2x7f_A 175 VSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----LFL-- 245 (326)
T ss_dssp TTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHH--
T ss_pred CceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-----HHH--
Confidence 9987653221 123456899999999876 56689999999999999999999999965322110 000
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+.....+... ...++..+.+++.+||..+|++||++.|+++|-.
T Consensus 246 ---~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~ 289 (326)
T 2x7f_A 246 ---IPRNPAPRLK---------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289 (326)
T ss_dssp ---HHHSCCCCCS---------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHH
T ss_pred ---hhcCccccCC---------ccccCHHHHHHHHHHhccChhhCCCHHHHhhChH
Confidence 0000000000 1123456889999999999999999999998743
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=355.62 Aligned_cols=268 Identities=21% Similarity=0.265 Sum_probs=197.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~~~ 782 (1002)
.+|+..+.||+|+||+||+|+.. +|+.||||++..... ...+|++++++++|||||++++++..... ...+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35888999999999999999875 699999999875432 23469999999999999999998854321 122346
Q ss_pred HhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEecccccc
Q 037042 783 LALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFGITK 858 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~ 858 (1002)
+||||+++ ++.+.+.. .+..+++..++.++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999986 66665542 3446899999999999999999999 8999999999999999955 678999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh---hhh
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL---ISI 934 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~---~~~ 934 (1002)
.+..... .....||+.|+|||++.+. .|+.++|||||||++|||++|+.||...... ..+..++..... +.+
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 7654332 2345789999999988664 7899999999999999999999999764221 122222221110 011
Q ss_pred hhcc-------cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 MKIV-------DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ~~i~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+. -+... ........+...+..+.+++.+||.+||++|||+.|+++|-+
T Consensus 282 ~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~ 339 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIK-AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339 (420)
T ss_dssp HHHCSCCCCCCCCCCC-CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HhhChhhhhhccCccC-CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence 1110 00000 000111112234567899999999999999999999998743
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=345.73 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=197.2
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcc--CCCcceeeeEEecCchhh
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIR--HRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~ 778 (1002)
...++|++.+.||+|+||.||+|+..+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--- 101 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--- 101 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS---
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC---
Confidence 3456799999999999999999998889999999997542 345678899999999997 599999999998776
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||| +.+++|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++ ++.+||+|||+++
T Consensus 102 -~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~ 174 (313)
T 3cek_A 102 -YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIAN 174 (313)
T ss_dssp -EEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred -EEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEEeeccccc
Confidence 5679999 56889999998755 5899999999999999999999 88999999999999996 4899999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCC-----------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSE-----------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ . .
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~-~- 249 (313)
T 3cek_A 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---K-L- 249 (313)
T ss_dssp C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---H-H-
T ss_pred cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---H-H-
Confidence 7654433222344578999999998765 4688999999999999999999999975422111 1 1
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+.++...... +...+..+.+++.+||+.+|++||++.|+++|-+
T Consensus 250 -------~~~~~~~~~~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 250 -------HAIIDPNHEIEF------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp -------HHHHCTTSCCCC------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred -------HHHHhcccccCC------cccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 111111110000 0112356889999999999999999999999865
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=352.75 Aligned_cols=274 Identities=20% Similarity=0.270 Sum_probs=199.7
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~~~l 783 (1002)
.+|+..+.||+|+||+||+|+...+..||+|++...... ..+|+++++.++||||+++++++..... ...+.++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 468999999999999999999877777999988654321 2369999999999999999999865431 1123569
Q ss_pred hhccCCCCChhHhhh--ccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLY--SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla~~~ 860 (1002)
||||++++.+..... ..+..+++..++.++.||++||+||| +.+|+||||||+|||++ .++.+||+|||+|+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999998754433332 22346899999999999999999999 89999999999999998 7999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh---hhhh
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI---SIMK 936 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~ 936 (1002)
..... .....||+.|+|||++.+. .|+.++||||+||++|||++|+.||....... .+...+...... .+..
T Consensus 193 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHH
T ss_pred cCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence 54432 2345789999999987664 58999999999999999999999997643221 122222111000 0000
Q ss_pred c----ccCccC--ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhcc
Q 037042 937 I----VDGSLL--SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIND 990 (1002)
Q Consensus 937 i----~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~ 990 (1002)
+ ...... .........+...+..+.+++.+||++||++|||+.|+++| +++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 0 000000 01111111222355689999999999999999999999998 444443
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=373.08 Aligned_cols=257 Identities=25% Similarity=0.403 Sum_probs=205.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|++. .+..||||++.... ....+.+.+|+.++++++||||+++++++..+.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~---- 464 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP---- 464 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCc----
Confidence 457888999999999999999864 25679999987543 334577899999999999999999999985432
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++||||+++|+|.+++...+..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 465 -~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 465 -VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp -CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred -eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 47999999999999999877667899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... +.... +.
T Consensus 541 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~--------i~ 606 (656)
T 2j0j_A 541 MEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGR--------IE 606 (656)
T ss_dssp CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH--------HH
T ss_pred cCCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHH--------HH
Confidence 6543322 2234457789999999988899999999999999999997 99998764221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++|||+.|++++|+++.+
T Consensus 607 ~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 607 NGERLP-------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCC-------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 111000 112345678999999999999999999999999998753
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=363.04 Aligned_cols=347 Identities=19% Similarity=0.181 Sum_probs=251.2
Q ss_pred cCCCCCCCCCc----ccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEE
Q 037042 32 KNWNSSISFCN----WTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLS 107 (1002)
Q Consensus 32 ~~w~~~~~~c~----w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 107 (1002)
++|.++.+||. |.++.|+.. ++-...... .+..--.+++++.|++++|.+++..+..+.++++|++|+
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~~------i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~ 81 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDVH------IDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLN 81 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSCE------ECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEE
T ss_pred cCCCCCCcCcccCcCceeEecCce------ecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEE
Confidence 58998888874 766666531 111111111 111122467788888888888755555567788888888
Q ss_pred ecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeecccccc
Q 037042 108 FGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 108 L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
|++|.+++ +|...|..+++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|++|.++
T Consensus 82 L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 160 (597)
T 3oja_B 82 LNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE 160 (597)
T ss_dssp CTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCC-CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCC
Confidence 88888874 44445577888888888888888777777888888888888888888555555788888888888888887
Q ss_pred ccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCcc
Q 037042 188 GAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIP 267 (1002)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 267 (1002)
+ ..|..|+++++|++|+|++|++++.. +..+++|+.|++++|.+++.
T Consensus 161 ~-------------------------~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l----- 207 (597)
T 3oja_B 161 R-------------------------IEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL----- 207 (597)
T ss_dssp B-------------------------CCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----
T ss_pred C-------------------------CChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc-----
Confidence 5 34566788888888888888887652 45567788888888887632
Q ss_pred ccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCC
Q 037042 268 YVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSN 347 (1002)
Q Consensus 268 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~ 347 (1002)
...++|++|++++|.++...+. + .++|+.|+|++|.+++ +..++.+++|+.|+|++|.++.++.. .|..
T Consensus 208 -~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~-----~~~~ 276 (597)
T 3oja_B 208 -AIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYH-----PFVK 276 (597)
T ss_dssp -ECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESG-----GGTT
T ss_pred -cCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHH-----HhcC
Confidence 2345788888888888754333 2 3688999999999886 36788899999999999998887543 3778
Q ss_pred CCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCE
Q 037042 348 CKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQV 427 (1002)
Q Consensus 348 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 427 (1002)
+++|+.|+|++|.+.++ |..+..+++|+.|+|++|.++ .+|..+..+++|+.
T Consensus 277 l~~L~~L~Ls~N~l~~l---------------------------~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~ 328 (597)
T 3oja_B 277 MQRLERLYISNNRLVAL---------------------------NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 328 (597)
T ss_dssp CSSCCEEECTTSCCCEE---------------------------ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred ccCCCEEECCCCCCCCC---------------------------CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCE
Confidence 88888888888877643 334455677777888887777 46666777888888
Q ss_pred EEccCCcccccCCccccCCccccEEEccCCcCCcc
Q 037042 428 LYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGS 462 (1002)
Q Consensus 428 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 462 (1002)
|+|++|.+++.. +..+++|+.|+|++|.+.+.
T Consensus 329 L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 329 LYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp EECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred EECCCCCCCCcC---hhhcCCCCEEEeeCCCCCCh
Confidence 888888887542 55677888888888887753
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=342.14 Aligned_cols=275 Identities=18% Similarity=0.222 Sum_probs=196.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch-------
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF------- 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 776 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++.....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467999999999999999999866 589999999987666667889999999999999999999998753211
Q ss_pred ---hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEe
Q 037042 777 ---KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLS 852 (1002)
Q Consensus 777 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~ 852 (1002)
.....++||||++ |+|.+++... .+++..++.++.|+++||+||| +.+|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 0113469999997 6999999653 4889999999999999999999 89999999999999997 67799999
Q ss_pred cccccccccCCCce-eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 853 DFGITKLLTREDQF-VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 853 DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
|||+++........ .......+|..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..........
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 99999876532211 11233457889999997655 678999999999999999999999997643211 1111111000
Q ss_pred ------hhhhhhc----ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 ------LISIMKI----VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ------~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+.... ..................++..+.+++.+||+.||++|||++|+++|-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY 308 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHH
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcc
Confidence 0000000 0000000000000011234677999999999999999999999999865
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=353.47 Aligned_cols=273 Identities=19% Similarity=0.232 Sum_probs=184.4
Q ss_pred CCCC-CceeeccCcceEEEEEeC---CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSE-NNLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.|+. .++||+|+||+||+|+.. +++.||||++.... ....+.+|++++++++||||+++++++...... ..+
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~--~~~ 96 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADR--KVW 96 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT--EEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC--eEE
Confidence 3554 468999999999999865 57899999997543 235678999999999999999999998653322 457
Q ss_pred HhhccCCCCChhHhhhccC--------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee----CCCCcEE
Q 037042 783 LALEYMPHGSLEKYLYSSN--------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAH 850 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~--------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl----~~~~~~k 850 (1002)
+||||+++ +|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999965 8888775321 14889999999999999999999 8999999999999999 6789999
Q ss_pred EecccccccccCCCc-eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCccccccc--------c
Q 037042 851 LSDFGITKLLTREDQ-FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG--------M 920 (1002)
Q Consensus 851 l~DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~--------~ 920 (1002)
|+|||+|+.+..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.....+. .
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 252 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence 999999987654322 1223456789999999988774 58999999999999999999999997543210 1
Q ss_pred cHHHHHHHHHhhh---hhhccc------------CccCChhhh-HHH--hHHHHHHHHHHHHhHccccCCCCCCCHHHHH
Q 037042 921 TLKHWVNDWLLIS---IMKIVD------------GSLLSREDI-QFV--AKEQCMSFVFNMAMECTVESPEKRINAKEIV 982 (1002)
Q Consensus 921 ~~~~~~~~~~~~~---~~~i~~------------~~~~~~~~~-~~~--~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl 982 (1002)
.+...+....... ...+.. ......... ... ........+.+++.+||++||.+|||++|++
T Consensus 253 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L 332 (405)
T 3rgf_A 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332 (405)
T ss_dssp HHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 1111111110000 000000 000000000 000 0001145688999999999999999999999
Q ss_pred HHHHh
Q 037042 983 TRLLK 987 (1002)
Q Consensus 983 ~~L~~ 987 (1002)
+|-+-
T Consensus 333 ~hp~f 337 (405)
T 3rgf_A 333 QDPYF 337 (405)
T ss_dssp TSGGG
T ss_pred cChhh
Confidence 99764
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=344.99 Aligned_cols=265 Identities=18% Similarity=0.201 Sum_probs=178.6
Q ss_pred hcCCCCCc-eeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENN-LIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+ .||+|+||+||+|+.. +|+.||||++.... .........++.++||||+++++++..........+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 56788854 6999999999999865 69999999987532 112222334566799999999999876332222457
Q ss_pred HhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEecccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGITK 858 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~ 858 (1002)
+||||+++|+|.+++..... .+++..++.++.||+.||+||| +++|+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 99999999999999987643 6899999999999999999999 889999999999999975 4569999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........... . ...+.
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~--------~~~~~ 246 (336)
T 3fhr_A 180 ETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-M--------KRRIR 246 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-H--------HHhhh
Confidence 655322 2345689999999999888899999999999999999999999976433211000 0 00000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
........ .....++..+.+++.+||..+|++|||+.|+++|-+--.....
T Consensus 247 ~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 297 (336)
T 3fhr_A 247 LGQYGFPN----PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVV 297 (336)
T ss_dssp ----CCCT----TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGS
T ss_pred ccccccCc----hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccC
Confidence 00000000 0012345678899999999999999999999998764444333
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=336.19 Aligned_cols=275 Identities=20% Similarity=0.270 Sum_probs=220.2
Q ss_pred CCCChhHHHHHHHHHHhccCCCCCccccCC----CCCCCCCcccccEeeC--------CCCcEEEEEeCCCCCccccCcc
Q 037042 5 TSNITTDLDALHALKTHITNDPTNFFAKNW----NSSISFCNWTGVTCDV--------HSHRVTALNISHLSLSGTIPSR 72 (1002)
Q Consensus 5 ~~~~~~~~~~l~~~k~~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~~--------~~~~v~~L~l~~~~l~~~~p~~ 72 (1002)
.....+|++||++||+++..||.++.. +| ..+.++|.|.|++|+. ...+|+.|+|++|+++ .+|+.
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~-~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHS-AWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHH-HHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred cccCchHHHHHHHHHHhccCCchhhhh-hhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 456688999999999999889988764 79 5677899999999953 3468999999999998 88999
Q ss_pred cCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccC----
Q 037042 73 LGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSN---- 148 (1002)
Q Consensus 73 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---- 148 (1002)
++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..+ .++++|++|+|++|.+.+.+|..++.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l-~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASI-ASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGG-GGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHH-hcCcCCCEEECCCCCCccccChhHhhccch
Confidence 999999999999999999 89999999999999999999998 788765 56888888888888888888877664
Q ss_pred -----CCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCcc
Q 037042 149 -----CTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLR 223 (1002)
Q Consensus 149 -----l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~ 223 (1002)
+++|++|+|++|+++ .+|..|+++++|++|+|++|+++ .+|..++.++
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~--------------------------~l~~~l~~l~ 229 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS--------------------------ALGPAIHHLP 229 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC--------------------------CCCGGGGGCT
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC--------------------------cCchhhccCC
Confidence 777777777777777 67777777777777777777776 3555667777
Q ss_pred ccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeec
Q 037042 224 NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLEL 303 (1002)
Q Consensus 224 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 303 (1002)
+|++|+|++|++.+.+|..+.. +++|++|+|++|++.+.+|..+.++++|++|+|
T Consensus 230 ~L~~L~Ls~n~~~~~~p~~~~~-------------------------l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 284 (328)
T 4fcg_A 230 KLEELDLRGCTALRNYPPIFGG-------------------------RAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284 (328)
T ss_dssp TCCEEECTTCTTCCBCCCCTTC-------------------------CCCCCEEECTTCTTCCBCCTTGGGCTTCCEEEC
T ss_pred CCCEEECcCCcchhhhHHHhcC-------------------------CCCCCEEECCCCCchhhcchhhhcCCCCCEEeC
Confidence 7777777777777666665554 455666666666666677878888888888888
Q ss_pred CCCccCCCCccccccccccchhccccccCccch
Q 037042 304 QKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLT 336 (1002)
Q Consensus 304 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~ 336 (1002)
++|++.+.+|..|+++++|+.+++..|.+..++
T Consensus 285 ~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l~ 317 (328)
T 4fcg_A 285 RGCVNLSRLPSLIAQLPANCIILVPPHLQAQLD 317 (328)
T ss_dssp TTCTTCCCCCGGGGGSCTTCEEECCGGGSCC--
T ss_pred CCCCchhhccHHHhhccCceEEeCCHHHHHHHh
Confidence 888888888888888888888888887776654
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-38 Score=347.03 Aligned_cols=260 Identities=20% Similarity=0.269 Sum_probs=199.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+..+ .||+|+++... ....+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~ 105 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP----HLA 105 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS----CEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC----ceE
Confidence 4679999999999999999998753 59999986432 223456778999999999999999999998766 467
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++...+..+++..+..++.||++||+||| +.+|+||||||+||+++ ++.+||+|||+++....
T Consensus 106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 999999999999999887667899999999999999999999 89999999999999998 68999999999876532
Q ss_pred CCc---eeeeccCCCCcccccccccCC---------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 863 EDQ---FVTQTQTPATIGYMALEYGSE---------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 863 ~~~---~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~-- 254 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-----AIIWQ-- 254 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-----HHHHH--
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH--
Confidence 211 112234568999999998764 45789999999999999999999999764221 11111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
+..-..+.... ..++..+.+++.+||..+|++|||+.|++++|+++.....
T Consensus 255 ---~~~~~~~~~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 255 ---MGTGMKPNLSQ---------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp ---HHTTCCCCCCC---------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred ---hccCCCCCCCc---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 01101111100 1123458899999999999999999999999999986543
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-37 Score=342.13 Aligned_cols=265 Identities=18% Similarity=0.237 Sum_probs=202.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe--CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCC------cceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI--QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN------IIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 776 (1002)
.++|++.+.||+|+||+||+|.. .+++.||||+++.. ....+.+.+|+++++.++|++ |+++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~- 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG- 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT-
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC-
Confidence 35799999999999999999986 36899999999754 334577889999999987654 999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC----------
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---------- 845 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---------- 845 (1002)
..++||||+ +++|.+++...+. .+++..+..++.||++||+||| +++|+||||||+||+++.
T Consensus 91 ---~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 91 ---HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp ---EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred ---cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCc
Confidence 567999999 8899999977653 5889999999999999999999 899999999999999987
Q ss_pred ---------CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc
Q 037042 846 ---------NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF 916 (1002)
Q Consensus 846 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~ 916 (1002)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred cccccccccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 6789999999998654322 34578999999999999899999999999999999999999997642
Q ss_pred cccccHHHHHHHHHh--hhh-hhccc------CccCChh---------------hhHHHhHHHHHHHHHHHHhHccccCC
Q 037042 917 NEGMTLKHWVNDWLL--ISI-MKIVD------GSLLSRE---------------DIQFVAKEQCMSFVFNMAMECTVESP 972 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~--~~~-~~i~~------~~~~~~~---------------~~~~~~~~~~~~~l~~li~~cl~~~P 972 (1002)
... ........... ..+ ..... ....... .........++..+.+++.+||+.||
T Consensus 239 ~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 239 SKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp HHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred hHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 211 11111100000 000 00000 0000000 00001123456789999999999999
Q ss_pred CCCCCHHHHHHH
Q 037042 973 EKRINAKEIVTR 984 (1002)
Q Consensus 973 ~~Rpt~~evl~~ 984 (1002)
++|||+.|+++|
T Consensus 318 ~~Rpt~~ell~h 329 (339)
T 1z57_A 318 AKRITLREALKH 329 (339)
T ss_dssp TTSCCHHHHTTS
T ss_pred ccccCHHHHhcC
Confidence 999999999987
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=339.47 Aligned_cols=258 Identities=22% Similarity=0.301 Sum_probs=194.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch-------
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF------- 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 776 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++++++||||+++++++.....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457899999999999999999864 7999999999654 3445778899999999999999999998865321
Q ss_pred --hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 777 --KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 777 --~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
.....++||||+++|+|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 012347999999999999999876667888999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCCc------------eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCccccccccc
Q 037042 855 GITKLLTREDQ------------FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT 921 (1002)
Q Consensus 855 Gla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~ 921 (1002)
|+++....... ........||..|+|||++.+. .++.++||||+||++|||++ ||......
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~--- 234 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER--- 234 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH---
Confidence 99987643211 1112345689999999998764 68999999999999999998 55432111
Q ss_pred HHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 922 LKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...... +.......+.. .+..++..+.+++.+||+.||++|||+.|+++|-
T Consensus 235 -~~~~~~--------~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 235 -VNILKK--------LRSVSIEFPPD----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp -HHHHHH--------HHSTTCCCCTT----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred -HHHHHh--------ccccccccCcc----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 111111 11110000000 1123345688999999999999999999999874
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=346.60 Aligned_cols=200 Identities=24% Similarity=0.320 Sum_probs=170.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CC-----CcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HR-----NIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~ 776 (1002)
..++|++.+.||+|+||+||+|+.. +++.||||+++.. ......+..|+++++.++ |+ +|+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~- 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN- 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT-
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC-
Confidence 4578999999999999999999865 6889999999754 234567788999998885 55 4999999988766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC--CCCcEEEec
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG--DNMVAHLSD 853 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~--~~~~~kl~D 853 (1002)
..++||||+++ +|.+++.... ..+++..+..++.|++.||+|||. +..+|+||||||+|||++ .++.+||+|
T Consensus 130 ---~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 130 ---HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp ---EEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred ---ceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 56899999964 9999998754 358999999999999999999993 247899999999999994 578899999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccc
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~ 915 (1002)
||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 205 FG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQRI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceeccccc-----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99998765322 3457899999999999999999999999999999999999999764
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=348.38 Aligned_cols=272 Identities=15% Similarity=0.191 Sum_probs=202.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-----------CCCcceeeeEEe
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-----------HRNIIKIISCCS 772 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 772 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++... ......+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999985 47899999999754 234567888999999886 899999999987
Q ss_pred cCchhhHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeC------
Q 037042 773 IGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLG------ 844 (1002)
Q Consensus 773 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~------ 844 (1002)
..+......++||||+ +++|.+++.... ..+++..+..++.||+.||+||| ++ +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 6543333457999999 889999997643 35899999999999999999999 77 999999999999994
Q ss_pred CCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc----
Q 037042 845 DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM---- 920 (1002)
Q Consensus 845 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~---- 920 (1002)
..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 45589999999998765422 345789999999999988999999999999999999999999976432110
Q ss_pred -cHHHHHHHHHhhh-------------------hhhcccCccCChh---hhHHHhHHHHHHHHHHHHhHccccCCCCCCC
Q 037042 921 -TLKHWVNDWLLIS-------------------IMKIVDGSLLSRE---DIQFVAKEQCMSFVFNMAMECTVESPEKRIN 977 (1002)
Q Consensus 921 -~~~~~~~~~~~~~-------------------~~~i~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 977 (1002)
.+........... ...+......... ......+..++..+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111111000000 0000000000000 0001123456788999999999999999999
Q ss_pred HHHHHHHHH
Q 037042 978 AKEIVTRLL 986 (1002)
Q Consensus 978 ~~evl~~L~ 986 (1002)
++|+++|-+
T Consensus 328 ~~ell~hp~ 336 (373)
T 1q8y_A 328 AGGLVNHPW 336 (373)
T ss_dssp HHHHHTCGG
T ss_pred HHHHhhChh
Confidence 999999855
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=344.75 Aligned_cols=267 Identities=19% Similarity=0.219 Sum_probs=197.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh--H
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA--L 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--~ 779 (1002)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++....... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357999999999999999999864 69999999997542 334567889999999999999999999987654211 1
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||++ |+|.+++.. .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 2379999997 599888753 3899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hh-h
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SI-M 935 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~-~ 935 (1002)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.......... .. .
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 5432 234578999999998776 678999999999999999999999997642211 111111100000 00 0
Q ss_pred hccc--------C--ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIVD--------G--SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~--------~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+.+ . ....... . .....++..+.+++.+||..||++|||++|+++|-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 308 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDF-T-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCT-T-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHhhHHHHHHHHhCcCCCCccH-H-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 0000 0 0000000 0 001234567899999999999999999999998843
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=344.80 Aligned_cols=280 Identities=19% Similarity=0.216 Sum_probs=192.0
Q ss_pred HHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--
Q 037042 700 ELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF-- 776 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-- 776 (1002)
......++|++.+.||+|+||+||+|+.. +|+.||||++.... .......+|++.++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 34456789999999999999999999864 68999999986543 223455678888889999999999999865331
Q ss_pred -hhHHHHHhhccCCCCChhHhhh---ccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEE
Q 037042 777 -KALFKALALEYMPHGSLEKYLY---SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHL 851 (1002)
Q Consensus 777 -~~~~~~lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl 851 (1002)
...+.++||||+++ ++.+.+. .....+++..+..++.|++.|+.||| .++++|+||||||+||+++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence 11235689999987 5544333 23346889999999999999999999 34789999999999999996 899999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+.....
T Consensus 174 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~ 249 (360)
T 3e3p_A 174 CDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLG 249 (360)
T ss_dssp CCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred eeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcC
Confidence 99999987764432 2345789999999987654 4899999999999999999999999764322 11222211110
Q ss_pred hh--hhhhcccCcc----------CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LI--SIMKIVDGSL----------LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~--~~~~i~~~~~----------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. ......++.. ..............+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 317 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY 317 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGG
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcc
Confidence 00 0000000000 00000000011124567999999999999999999999999844
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=341.01 Aligned_cols=275 Identities=22% Similarity=0.192 Sum_probs=201.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh-hHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK-ALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...... ....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467999999999999999999865 68999999997543 33456788999999999999999999988654211 1245
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 79999997 5999998764 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCcee--------eeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 862 REDQFV--------TQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 862 ~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||........ ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCC
Confidence 432111 1223568999999997654 6789999999999999999999999976422110 11111000000
Q ss_pred h---h---------hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 S---I---------MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 ~---~---------~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. . .+...................++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 0 0 0000000000000000011234567899999999999999999999999854
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=338.86 Aligned_cols=274 Identities=23% Similarity=0.283 Sum_probs=201.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEe--CCCcEEEEEEeecccc--hhHHHHHHHHHHHHhc---cCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI--QDGMEVAVKVFNQQCG--RAFKSFDVECEVMKSI---RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~ 776 (1002)
..++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+|+.+++.+ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999986 4688999999874322 2234566788777766 89999999999862110
Q ss_pred -hhHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 777 -KALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 777 -~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
.....++||||++ |+|.+++..... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 1114579999998 599999876543 5899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
|+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||....... .+............
T Consensus 165 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCG
T ss_pred cccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCc
Confidence 9998665332 2234578999999999998899999999999999999999999997643211 11111111000000
Q ss_pred hhccc------CccCC-hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 935 MKIVD------GSLLS-REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 935 ~~i~~------~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..... ..... ...........++..+.+++.+||..+|++|||+.|+++|-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 298 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 00000 00000 00000001123456788999999999999999999999873
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=332.69 Aligned_cols=254 Identities=21% Similarity=0.274 Sum_probs=202.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
..++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+ .
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 95 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----S 95 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC----e
Confidence 3467999999999999999999865 68999999987542 234678899999999999999999999998766 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEeccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGIT 857 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla 857 (1002)
.++||||+++++|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 579999999999999887654 4899999999999999999999 899999999999999975 457999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
......... ....||+.|+|||++.+ .++.++||||||+++|||++|+.||...... .......
T Consensus 172 ~~~~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~------- 235 (287)
T 2wei_A 172 TCFQQNTKM---KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----DILKRVE------- 235 (287)
T ss_dssp GTBCCCSSC---SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHH-------
T ss_pred eeecCCCcc---ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHH-------
Confidence 876543321 23357889999998765 4899999999999999999999999763221 1111111
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+...... .....++..+.+++.+||+.+|++|||+.|+++|-.
T Consensus 236 -~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 279 (287)
T 2wei_A 236 -TGKYAFDL----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (287)
T ss_dssp -HCCCCCCS----GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred -cCCCCCCc----hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHH
Confidence 11100000 001223467889999999999999999999999743
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=351.47 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=186.0
Q ss_pred CCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.... ..++||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~----~~~lv~ 88 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDR----FLYIAL 88 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS----EEEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC----eEEEEE
Confidence 45556889999999998777678999999998753 235678899999986 8999999999988766 567999
Q ss_pred ccCCCCChhHhhhccCCc------CCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-------------
Q 037042 786 EYMPHGSLEKYLYSSNYI------LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN------------- 846 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~------l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~------------- 846 (1002)
||++ |+|.+++...... .++..++.++.||+.||+||| +.+|+||||||+|||++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 6999999865431 122345679999999999999 8999999999999999654
Q ss_pred CcEEEecccccccccCCCcee--eeccCCCCcccccccccCC-------CCcCcccchHHHHHHHHHHHh-CCCCCcccc
Q 037042 847 MVAHLSDFGITKLLTREDQFV--TQTQTPATIGYMALEYGSE-------GRVSTNGDVYNFGVMLMETFT-GKKPTNEIF 916 (1002)
Q Consensus 847 ~~~kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~ 916 (1002)
+.+||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 589999999998776543211 1234579999999998865 568999999999999999999 999996532
Q ss_pred cccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 917 NEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
... ..+. ......... .......++..+.+++.+||+.||++|||+.|+++|
T Consensus 245 ~~~---~~i~--------~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 245 SRE---SNII--------RGIFSLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp THH---HHHH--------HTCCCCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhH---HHHh--------cCCCCcccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 211 0100 001000000 011123456789999999999999999999999976
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-37 Score=340.44 Aligned_cols=256 Identities=24% Similarity=0.304 Sum_probs=179.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHH-HHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECE-VMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+..|+. +++.++||||+++++++...+ ..
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~----~~ 96 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG----DC 96 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS----EE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC----ce
Confidence 367899999999999999999864 78999999997653 233445556666 677789999999999998766 45
Q ss_pred HHhhccCCCCChhHhhhc----cCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 782 ALALEYMPHGSLEKYLYS----SNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
++||||+++ +|.+++.. ....+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+
T Consensus 97 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 172 (327)
T 3aln_A 97 WICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGI 172 (327)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSS
T ss_pred EEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCC
Confidence 799999985 88777753 2346899999999999999999999 77 999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCccccccccc----CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYG----SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
++....... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||........
T Consensus 173 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------ 237 (327)
T 3aln_A 173 SGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------------ 237 (327)
T ss_dssp SCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------
T ss_pred ceecccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH------------
Confidence 987654322 2334689999999998 456789999999999999999999999975322111
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....+.......... .....++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 238 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 288 (327)
T 3aln_A 238 QLTQVVKGDPPQLSN---SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPF 288 (327)
T ss_dssp --CCCCCSCCCCCCC---CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred HHHHHhcCCCCCCCC---cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChH
Confidence 011222211110000 001123467899999999999999999999998744
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=339.01 Aligned_cols=333 Identities=19% Similarity=0.174 Sum_probs=225.4
Q ss_pred ccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCc
Q 037042 273 NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLE 352 (1002)
Q Consensus 273 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~ 352 (1002)
+++.|++++|.++...+..+..+++|++|+|++|.++++.+..|+++++|++|+|++|+++.++.. .+.++++|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~ 120 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVPLLT 120 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTCC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHH-----HhcCCCCCC
Confidence 344444444444332222333444444444444444444444444444444444444444443322 134444444
Q ss_pred EEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccC
Q 037042 353 FIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPD 432 (1002)
Q Consensus 353 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 432 (1002)
+|+|++|.+..+... .+. -.++|++|++++|++++..|..|..+++|++|++++|++++. .+..+++|+.|++++
T Consensus 121 ~L~L~~n~l~~l~~~-~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~ 195 (390)
T 3o6n_A 121 VLVLERNDLSSLPRG-IFH-NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSY 195 (390)
T ss_dssp EEECCSSCCCCCCTT-TTT-TCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCS
T ss_pred EEECCCCccCcCCHH-Hhc-CCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccc
Confidence 444444444433211 011 123455555555555555667788888888888888888764 356678888889988
Q ss_pred CcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCc
Q 037042 433 NKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLP 512 (1002)
Q Consensus 433 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 512 (1002)
|.+++. ....+|+.|++++|.+... |.. ..++|+.|++++|.+++. ..+..+++|++|++++|.+++..|
T Consensus 196 n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~ 265 (390)
T 3o6n_A 196 NLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMY 265 (390)
T ss_dssp SCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEES
T ss_pred cccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcCh
Confidence 888742 2345788999999998865 332 246899999999999875 578889999999999999998888
Q ss_pred ccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCc
Q 037042 513 LEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSY 592 (1002)
Q Consensus 513 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 592 (1002)
..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++. | +..+++
T Consensus 266 ~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~ 340 (390)
T 3o6n_A 266 HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHT 340 (390)
T ss_dssp GGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCC
T ss_pred hHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhcc
Confidence 899999999999999999986 4667788999999999999999 5777889999999999999999854 3 778899
Q ss_pred cceeeCCCCcCcccCCCCCCCCCCccccccCCCCCCCCC
Q 037042 593 LKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631 (1002)
Q Consensus 593 L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 631 (1002)
|+.|++++|++++.... ..+..+....+.++...|..+
T Consensus 341 L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 341 LKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred CCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 99999999999985432 234455555667777777654
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=351.22 Aligned_cols=250 Identities=22% Similarity=0.368 Sum_probs=187.3
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+|+..+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.... ..++|
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~----~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ----FQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT----EEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC----EEEEE
Confidence 46888899999999997765566799999999875432 2356799999999 7999999999998766 55899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-----CCcEEEeccccccc
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-----NMVAHLSDFGITKL 859 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DfGla~~ 859 (1002)
|||++ |+|.+++...........+..++.||++||+||| +.+|+||||||+||+++. ...+||+|||+|+.
T Consensus 97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 99996 5999999877655555567789999999999999 899999999999999953 34688999999987
Q ss_pred ccCCCc-eeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhh
Q 037042 860 LTREDQ-FVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 860 ~~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
...... ........||+.|+|||++. ...++.++||||+||++|||++ |..||........ .. .
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~------~~-----~ 241 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA------NI-----L 241 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH------HH-----H
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH------HH-----H
Confidence 654322 12234567999999999987 4567889999999999999999 9999865322110 00 0
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.......... ........+.+++.+||+.||++|||+.|+++|
T Consensus 242 ~~~~~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 242 LGACSLDCLH-------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TTCCCCTTSC-------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccCCccccC-------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0000000000 112234567899999999999999999999975
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=337.33 Aligned_cols=246 Identities=23% Similarity=0.317 Sum_probs=193.0
Q ss_pred HHhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccch------hHHHHHHHHHHHHhc----cCCCcceeeeE
Q 037042 702 CQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGR------AFKSFDVECEVMKSI----RHRNIIKIISC 770 (1002)
Q Consensus 702 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~~~~~ 770 (1002)
....++|+..+.||+|+||.||+|+. .+++.||||++...... ....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999985 46899999999754321 223456799999998 89999999999
Q ss_pred EecCchhhHHHHHhhcc-CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCc
Q 037042 771 CSIGDFKALFKALALEY-MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMV 848 (1002)
Q Consensus 771 ~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~ 848 (1002)
+...+ ..++|+|| +.+++|.+++...+ .+++..++.++.||++||+||| +.+|+||||||+||+++ .++.
T Consensus 107 ~~~~~----~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 107 FETQE----GFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp C---------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTE
T ss_pred EecCC----eEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCe
Confidence 87665 56799999 78999999998754 4899999999999999999999 88999999999999998 8899
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
+||+|||+++...... .....||..|+|||++.+..+ +.++||||+||++|||++|+.||.....
T Consensus 179 ~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------- 244 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE---------- 244 (312)
T ss_dssp EEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------
T ss_pred EEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------
Confidence 9999999998765432 234568999999998876665 4589999999999999999999965211
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+....... +..++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 245 ---------~~~~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 245 ---------ILEAELHF--------PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp ---------HHHTCCCC--------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred ---------HhhhccCC--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 00011110 1123456889999999999999999999999754
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-37 Score=339.53 Aligned_cols=244 Identities=22% Similarity=0.290 Sum_probs=198.9
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccc------hhHHHHHHHHHHHHhcc--CCCcceeeeEEecC
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG------RAFKSFDVECEVMKSIR--HRNIIKIISCCSIG 774 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~ 774 (1002)
..++|+..+.||+|+||+||+|+. .+++.||||++..... .....+.+|+.++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 456799999999999999999985 4789999999975421 12245677999999996 59999999999877
Q ss_pred chhhHHHHHhhccCCC-CChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEe
Q 037042 775 DFKALFKALALEYMPH-GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLS 852 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~ 852 (1002)
+ ..++|+||+.+ ++|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++ .++.+||+
T Consensus 121 ~----~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 121 D----SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp S----EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEEC
T ss_pred C----cEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEe
Confidence 6 45799999976 89999997654 4899999999999999999999 89999999999999998 78999999
Q ss_pred cccccccccCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 193 Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------------- 254 (320)
T 3a99_A 193 DFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------------- 254 (320)
T ss_dssp CCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------------
T ss_pred eCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------------
Confidence 999998765432 234568999999998877665 7889999999999999999999965311
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+....... +..++..+.+++.+||+.+|++|||++|+++|-+
T Consensus 255 -----~~~~~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~ 296 (320)
T 3a99_A 255 -----IIRGQVFF--------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296 (320)
T ss_dssp -----HHHCCCCC--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred -----hhcccccc--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence 00000000 0113456889999999999999999999998744
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-36 Score=337.46 Aligned_cols=266 Identities=21% Similarity=0.284 Sum_probs=199.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CC-cEEEEEEeecccchhHHHHHHHHHHHHhccCCC------cceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DG-MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN------IIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 776 (1002)
.++|++.+.||+|+||+||+|+.. ++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~- 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG- 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT-
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC-
Confidence 467999999999999999999864 34 78999999754 334567888999999998765 889999887766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee------------
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL------------ 843 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl------------ 843 (1002)
..++||||+ ++++.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||++
T Consensus 96 ---~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 96 ---HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp ---EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred ---eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccc
Confidence 567999999 557777666543 46899999999999999999999 8999999999999999
Q ss_pred -------CCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc
Q 037042 844 -------GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF 916 (1002)
Q Consensus 844 -------~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~ 916 (1002)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 567899999999998654322 34578999999999999999999999999999999999999997643
Q ss_pred cccccHHHHHHHHHhh---hh-hh------cccCccCChhh---------------hHHHhHHHHHHHHHHHHhHccccC
Q 037042 917 NEGMTLKHWVNDWLLI---SI-MK------IVDGSLLSRED---------------IQFVAKEQCMSFVFNMAMECTVES 971 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~---~~-~~------i~~~~~~~~~~---------------~~~~~~~~~~~~l~~li~~cl~~~ 971 (1002)
.... .. .+...... .. .. ........... ........+...+.+++.+||+.|
T Consensus 244 ~~~~-~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 321 (355)
T 2eu9_A 244 NREH-LV-MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD 321 (355)
T ss_dssp HHHH-HH-HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred HHHH-HH-HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence 2111 11 11110000 00 00 00000000000 000011234568999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 037042 972 PEKRINAKEIVTRLL 986 (1002)
Q Consensus 972 P~~Rpt~~evl~~L~ 986 (1002)
|++|||+.|+++|-+
T Consensus 322 P~~Rpt~~e~l~hp~ 336 (355)
T 2eu9_A 322 PAQRITLAEALLHPF 336 (355)
T ss_dssp TTTSCCHHHHTTSGG
T ss_pred hhhCcCHHHHhcChh
Confidence 999999999998743
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-36 Score=330.20 Aligned_cols=256 Identities=35% Similarity=0.600 Sum_probs=243.3
Q ss_pred ccccEEecCCCCCCC--CCCcccCCCCCccEEEccC-CccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccE
Q 037042 375 HSLKIFDMSDCNVSG--SIPEEIGNLTNLIGFYLGG-NNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQ 451 (1002)
Q Consensus 375 ~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 451 (1002)
.+++.|+|++|++++ .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 368888899999988 8899999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCCcCCccCCccccCCccCcccccccccccccCCccccccc-cCceeeccCCCCCCCCcccccccccceeeeCCCCc
Q 037042 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLK-DILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNN 530 (1002)
Q Consensus 452 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 530 (1002)
|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..++ +|++|++++|++++.+|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999998 9999999999
Q ss_pred cCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC
Q 037042 531 FSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 531 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
+++.+|..|..+++|+.|+|++|.+++.+|. +..+++|++|+|++|+|++.+|..+..+++|+.|+|++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999977765 889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCCCCCCCCC
Q 037042 611 GSFGNFSAESFEGNKLLCGSPN 632 (1002)
Q Consensus 611 ~~~~~~~~~~~~~n~~~c~~~~ 632 (1002)
+.+.++....+.+|+++||.|.
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTS
T ss_pred ccccccChHHhcCCCCccCCCC
Confidence 8888999999999999999873
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=354.61 Aligned_cols=335 Identities=19% Similarity=0.178 Sum_probs=266.9
Q ss_pred CCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCC
Q 037042 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350 (1002)
Q Consensus 271 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~ 350 (1002)
+++++.|++++|.+...++..+.++++|++|+|++|.|+++.|..|+++++|++|+|++|.|+.++.. .|+++++
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~ 124 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVPL 124 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTT
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH-----HHcCCCC
Confidence 45666677777777655555566677777777777777776666777777777777777777776643 2566777
Q ss_pred CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEc
Q 037042 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 430 (1002)
|++|+|++|.|.++++. .+. -.++|++|+|++|++++..|..|+.+++|+.|+|++|.+++. .+..+++|+.|++
T Consensus 125 L~~L~L~~n~l~~l~~~-~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l 199 (597)
T 3oja_B 125 LTVLVLERNDLSSLPRG-IFH-NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANV 199 (597)
T ss_dssp CCEEECCSSCCCCCCTT-TTT-TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEEC
T ss_pred CCEEEeeCCCCCCCCHH-Hhc-cCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---Chhhhhhhhhhhc
Confidence 77777777777655332 112 234677788888888888888999999999999999999875 3567889999999
Q ss_pred cCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCC
Q 037042 431 PDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510 (1002)
Q Consensus 431 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 510 (1002)
++|.+++. ....+|+.|++++|.+....+.. .++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.
T Consensus 200 ~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~ 269 (597)
T 3oja_B 200 SYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKI 269 (597)
T ss_dssp CSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEE
T ss_pred ccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCC
Confidence 99998853 34468999999999998654433 26899999999999874 7899999999999999999999
Q ss_pred CcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCC
Q 037042 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590 (1002)
Q Consensus 511 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 590 (1002)
.|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++. | +..+
T Consensus 270 ~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~ 344 (597)
T 3oja_B 270 MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTH 344 (597)
T ss_dssp ESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTT
T ss_pred CHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhc
Confidence 89999999999999999999997 4777888999999999999999 6888899999999999999999864 3 6778
Q ss_pred CccceeeCCCCcCcccCCCCCCCCCCccccccCCCCCCCCC
Q 037042 591 SYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631 (1002)
Q Consensus 591 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 631 (1002)
++|+.|+|++|+|+|..+. ..+..+....+.++...|+.+
T Consensus 345 ~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 345 HTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999999999999987543 345666667788888888764
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=335.46 Aligned_cols=253 Identities=22% Similarity=0.254 Sum_probs=180.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch--hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR--AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++...... ....+..+..+++.++||||+++++++...+ ..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~----~~ 99 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT----DV 99 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----EE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC----cE
Confidence 457888999999999999999865 7899999999765322 2233444555788889999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
++||||+ ++.+..+.......+++..+..++.|+++||+||| ++ +|+||||||+||+++.++.+||+|||++...
T Consensus 100 ~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 100 FIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 7999999 55666666554556899999999999999999999 74 9999999999999999999999999999766
Q ss_pred cCCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||........ .........
T Consensus 176 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~-- 246 (318)
T 2dyl_A 176 VDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE----VLTKVLQEE-- 246 (318)
T ss_dssp --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH----HHHHHHHSC--
T ss_pred cCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH----HHHHHhccC--
Confidence 54322 23456899999999874 45689999999999999999999999975322111 111110000
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...... ...++..+.+++.+||+.||.+||++.|+++|-
T Consensus 247 ---~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 247 ---PPLLPG--------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHS 285 (318)
T ss_dssp ---CCCCCS--------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred ---CCCCCc--------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence 000000 011345688999999999999999999999874
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=322.96 Aligned_cols=305 Identities=26% Similarity=0.400 Sum_probs=148.5
Q ss_pred CCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCc
Q 037042 74 GNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLR 153 (1002)
Q Consensus 74 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 153 (1002)
..+++|++|++++|.++ .+| .+..+++|++|+|++|+++ .+|. +..+++|++|+|++|.+++ +| .+.++++|+
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~-~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQIT-DISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred hhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccc-cchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 34555666666666665 333 2555666666666666665 2333 4556666666666666653 33 466666666
Q ss_pred eEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCc
Q 037042 154 ILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233 (1002)
Q Consensus 154 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N 233 (1002)
+|+|++|++++ +|. +..+++|++|++++|.... .+..+..+++|++|++++|
T Consensus 114 ~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~--------------------------~~~~~~~l~~L~~L~l~~~ 165 (347)
T 4fmz_A 114 ELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLS--------------------------DLSPLSNMTGLNYLTVTES 165 (347)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCC--------------------------CCGGGTTCTTCCEEECCSS
T ss_pred EEECcCCcccC-chh-hccCCceeEEECCCCCCcc--------------------------cccchhhCCCCcEEEecCC
Confidence 66666666663 333 6666666666666664331 1223556666666666666
Q ss_pred ccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCc
Q 037042 234 KLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIP 313 (1002)
Q Consensus 234 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 313 (1002)
++++..+ +..+++|+.|++++|.+. +..+ +..+++|+.|++++|.+.+..+
T Consensus 166 ~~~~~~~--~~~l~~L~~L~l~~n~l~-------------------------~~~~--~~~l~~L~~L~l~~n~l~~~~~ 216 (347)
T 4fmz_A 166 KVKDVTP--IANLTDLYSLSLNYNQIE-------------------------DISP--LASLTSLHYFTAYVNQITDITP 216 (347)
T ss_dssp CCCCCGG--GGGCTTCSEEECTTSCCC-------------------------CCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CcCCchh--hccCCCCCEEEccCCccc-------------------------cccc--ccCCCccceeecccCCCCCCch
Confidence 6654332 444444444444444443 2111 3334444444444444443322
Q ss_pred cccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCc
Q 037042 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE 393 (1002)
Q Consensus 314 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 393 (1002)
+..+++|++|+|++|+++.++. +..+++|++|++++|.++++ +
T Consensus 217 --~~~~~~L~~L~l~~n~l~~~~~-------~~~l~~L~~L~l~~n~l~~~----------------------------~ 259 (347)
T 4fmz_A 217 --VANMTRLNSLKIGNNKITDLSP-------LANLSQLTWLEIGTNQISDI----------------------------N 259 (347)
T ss_dssp --GGGCTTCCEEECCSSCCCCCGG-------GTTCTTCCEEECCSSCCCCC----------------------------G
T ss_pred --hhcCCcCCEEEccCCccCCCcc-------hhcCCCCCEEECCCCccCCC----------------------------h
Confidence 4444444444444444444331 33444444444444444322 1
Q ss_pred ccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccC
Q 037042 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473 (1002)
Q Consensus 394 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 473 (1002)
.+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..| +..+++|
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 335 (347)
T 4fmz_A 260 AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKM 335 (347)
T ss_dssp GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTC
T ss_pred hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhcc
Confidence 223333344444444444322 224444444444444444444444444444444444444444444333 4444555
Q ss_pred cccccccccc
Q 037042 474 RNLSLASNEL 483 (1002)
Q Consensus 474 ~~L~L~~N~l 483 (1002)
+.|++++|.|
T Consensus 336 ~~L~l~~N~i 345 (347)
T 4fmz_A 336 DSADFANQVI 345 (347)
T ss_dssp SEESSSCC--
T ss_pred ceeehhhhcc
Confidence 5555555544
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=324.40 Aligned_cols=285 Identities=21% Similarity=0.357 Sum_probs=202.9
Q ss_pred ccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccc
Q 037042 292 IFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371 (1002)
Q Consensus 292 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (1002)
+..+++|++|+|++|+++++.+ |.++++|++|+|++|+++.++ .+.++++|++|++++|.+.++.+ +
T Consensus 62 ~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~~-------~~~~l~~L~~L~l~~n~i~~~~~---~- 128 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDIS-------ALQNLTNLRELYLNEDNISDISP---L- 128 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-------GGTTCTTCSEEECTTSCCCCCGG---G-
T ss_pred hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCch-------HHcCCCcCCEEECcCCcccCchh---h-
Confidence 3344444444444444443322 444444444444444444432 13444445555555554444322 1
Q ss_pred cccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccE
Q 037042 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQ 451 (1002)
Q Consensus 372 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 451 (1002)
...++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.
T Consensus 129 ~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 203 (347)
T 4fmz_A 129 ANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHY 203 (347)
T ss_dssp TTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCE
T ss_pred ccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccce
Confidence 112345555555554443333 37888888888888888875544 7888889999999998885433 778888999
Q ss_pred EEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCcc
Q 037042 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531 (1002)
Q Consensus 452 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 531 (1002)
|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++
T Consensus 204 L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l 277 (347)
T 4fmz_A 204 FTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQI 277 (347)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred eecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCcc
Confidence 9999998886544 7888899999999999887654 88889999999999998864 4688899999999999999
Q ss_pred CccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCc
Q 037042 532 SGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604 (1002)
Q Consensus 532 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1002)
++. ..+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|++++..| +..+++|+.|++++|+++
T Consensus 278 ~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 278 SDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 875 468889999999999999998888889999999999999999997666 788999999999999886
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=359.03 Aligned_cols=268 Identities=22% Similarity=0.265 Sum_probs=197.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~ 780 (1002)
.++|++.+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++..... ....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36799999999999999999986 46899999998764 33446778999999999999999999998755110 1124
Q ss_pred HHHhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEeccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLSDFG 855 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfG 855 (1002)
.++||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 5799999999999999987543 5888899999999999999999 899999999999999986664 9999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh---h
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL---I 932 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~---~ 932 (1002)
++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..|...... .
T Consensus 170 ~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSSTTCC-----
T ss_pred cccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhhhhhhcccch
Confidence 9987654432 24467899999999999999999999999999999999999999653211 111100000 0
Q ss_pred --hhhhcccCccCChhh--hHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHH
Q 037042 933 --SIMKIVDGSLLSRED--IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982 (1002)
Q Consensus 933 --~~~~i~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl 982 (1002)
.......+....... .........+..+.+++.+||.+||++|||+.|++
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 001111111100000 00001223567899999999999999999998844
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=317.85 Aligned_cols=235 Identities=12% Similarity=0.042 Sum_probs=185.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----~ 105 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA----G 105 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT----E
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC----c
Confidence 357999999999999999999865 58999999997653 234577899999999999999999999998766 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++... ....++.+++.||+.||+||| +++|+||||||+||+++.++.+||+++|
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 67999999999999999643 355678899999999999999 8999999999999999999999998543
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
|++| ++.++|||||||++|||++|+.||.......... ...+....
T Consensus 175 -----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~----------~~~~~~~~ 220 (286)
T 3uqc_A 175 -----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA----------PAERDTAG 220 (286)
T ss_dssp -----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE----------ECCBCTTS
T ss_pred -----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH----------HHHHHhcc
Confidence 4443 6889999999999999999999998643321100 00011111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
..... ......++..+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 221 ~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 221 QPIEP----ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp CBCCH----HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred CCCCh----hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 11111 01123356779999999999999999 99999999999886554
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=317.73 Aligned_cols=239 Identities=18% Similarity=0.240 Sum_probs=182.5
Q ss_pred hcCCCCC-ceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHH-HhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSEN-NLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVM-KSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|... +.||+|+||.||+|+. .+++.||||++... ..+.+|++++ +..+||||+++++++..........
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567776 7899999999999986 47899999998643 4567888888 5568999999999987511111245
Q ss_pred HHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEeccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGIT 857 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla 857 (1002)
++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 799999999999999987543 6899999999999999999999 899999999999999997 789999999998
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh-hh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI-MK 936 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~-~~ 936 (1002)
.... +..++.++||||+||++|||++|+.||........ .... ..
T Consensus 168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~----------~~~~~~~ 213 (299)
T 3m2w_A 168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----------SPGMKTR 213 (299)
T ss_dssp EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------CCSCCS
T ss_pred cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh----------hHHHHHH
Confidence 6432 23468899999999999999999999976422110 0000 01
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
+........ ......++..+.+++.+||+.+|++|||+.|+++|-+-..
T Consensus 214 ~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~ 262 (299)
T 3m2w_A 214 IRMGQYEFP----NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262 (299)
T ss_dssp SCTTCCSSC----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred HhhccccCC----chhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence 111111111 1111235677999999999999999999999999866433
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=337.13 Aligned_cols=244 Identities=15% Similarity=0.113 Sum_probs=179.8
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccC-CCccee---------eeEE
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRH-RNIIKI---------ISCC 771 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~~---------~~~~ 771 (1002)
..|...++||+|+||+||+|++ .+|+.||||++.... ....+.+.+|+.+++.++| +|.... ...+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4577788999999999999984 479999999987432 2235778999999999987 322111 1111
Q ss_pred ecCchh-------------hHHHHHhhccCCCCChhHhhh------ccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcE
Q 037042 772 SIGDFK-------------ALFKALALEYMPHGSLEKYLY------SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832 (1002)
Q Consensus 772 ~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ii 832 (1002)
...... ....+++|++ .+++|.+++. ..+..+++..++.++.||++||+||| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 111100 0011344444 4679999884 22345788899999999999999999 89999
Q ss_pred EccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCccccccccc----------CCCCcCcccchHHHHHHH
Q 037042 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG----------SEGRVSTNGDVYNFGVML 902 (1002)
Q Consensus 833 HrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlGv~l 902 (1002)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999999865432 244567 899999988 566689999999999999
Q ss_pred HHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHH
Q 037042 903 METFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982 (1002)
Q Consensus 903 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl 982 (1002)
|||++|+.||........ ...+.... ..++..+.+++.+||+.+|++||++.|++
T Consensus 308 ~elltg~~Pf~~~~~~~~-------------~~~~~~~~------------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-------------SEWIFRSC------------KNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-------------SGGGGSSC------------CCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhhh-------------HHHHHhhc------------ccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999999976432211 11111110 11235689999999999999999988887
Q ss_pred HH
Q 037042 983 TR 984 (1002)
Q Consensus 983 ~~ 984 (1002)
++
T Consensus 363 ~~ 364 (413)
T 3dzo_A 363 ET 364 (413)
T ss_dssp TS
T ss_pred hC
Confidence 65
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=354.18 Aligned_cols=243 Identities=21% Similarity=0.290 Sum_probs=192.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-HH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA-LF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...+... ..
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 367999999999999999999865 68999999986543 344567889999999999999999999998765211 11
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++.. .+++..++.++.||++||+||| +++|+||||||+|||++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 4799999999999988755 4899999999999999999999 8999999999999999885 9999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
... ....||+.|+|||++.++ ++.++|||||||++|||++|..||........
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-------------------- 284 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL-------------------- 284 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------------------
T ss_pred ccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc--------------------
Confidence 543 345689999999987664 48999999999999999999988765322111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-HHHHHHHHHhh
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-AKEIVTRLLKI 988 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-~~evl~~L~~i 988 (1002)
.... .....+..+.+++.+||+++|++||+ ++++.+.+..+
T Consensus 285 --~~~~-----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 --PEDD-----PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp --CTTC-----HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred --cccc-----cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0000 01123467889999999999999996 55555555544
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=309.96 Aligned_cols=197 Identities=23% Similarity=0.308 Sum_probs=100.8
Q ss_pred CCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEc
Q 037042 78 SLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRL 157 (1002)
Q Consensus 78 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 157 (1002)
+|+.+++++|.++ .+|..+. ++|++|+|++|++. .++...+.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCC-ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4666666666665 5555443 45666666666655 333333455566666666666665555555566666666666
Q ss_pred ccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccc
Q 037042 158 SYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237 (1002)
Q Consensus 158 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1002)
++|+++ .+|..+. ++|++|++++|++++. .+..++++++|++|++++|+++.
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~-------------------------~~~~~~~l~~L~~L~l~~n~l~~ 161 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKV-------------------------PKGVFSGLRNMNCIEMGGNPLEN 161 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCC-------------------------CSGGGSSCSSCCEEECCSCCCBG
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCcc-------------------------CHhHhCCCccCCEEECCCCcccc
Confidence 666555 4444433 4555555555555421 12234555555555555555532
Q ss_pred --ccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccc
Q 037042 238 --VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPST 315 (1002)
Q Consensus 238 --~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 315 (1002)
..|..+..+ +|++|++++|++++ +|..+. ++|++|+|++|++++..+..
T Consensus 162 ~~~~~~~~~~l--------------------------~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~ 212 (332)
T 2ft3_A 162 SGFEPGAFDGL--------------------------KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELED 212 (332)
T ss_dssp GGSCTTSSCSC--------------------------CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTS
T ss_pred CCCCcccccCC--------------------------ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHH
Confidence 333333333 44444444444442 232222 34555555555555544444
Q ss_pred cccccccchhccccccCccc
Q 037042 316 FGNLRNLKRLGLNNNHLTSL 335 (1002)
Q Consensus 316 ~~~l~~L~~L~L~~N~l~~l 335 (1002)
|.++++|++|+|++|+++.+
T Consensus 213 l~~l~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 213 LLRYSKLYRLGLGHNQIRMI 232 (332)
T ss_dssp STTCTTCSCCBCCSSCCCCC
T ss_pred hcCCCCCCEEECCCCcCCcC
Confidence 55555555544444444443
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=307.38 Aligned_cols=268 Identities=23% Similarity=0.307 Sum_probs=136.1
Q ss_pred CCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccc
Q 037042 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375 (1002)
Q Consensus 296 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 375 (1002)
++|++|+|++|+|+++.|..|.++++|++|+|++|+++.++.. .|.++++|++|+|++|.+..+... ..+
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~l~~~-----~~~ 123 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEK-----AFSPLRKLQKLYISKNHLVEIPPN-----LPS 123 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGG-----GSTTCTTCCEEECCSSCCCSCCSS-----CCT
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHh-----HhhCcCCCCEEECCCCcCCccCcc-----ccc
Confidence 3455555555555555455555555555555555555554321 245555555555555555433211 013
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccC--ccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEE
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN--GSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 453 (1002)
+|++|++++|++++..+..|..+++|+.|++++|.++ +..|..+..+ +|+.|++++|++++ +|..+. ++|+.|+
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELH 199 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCB
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEE
Confidence 4555555555555444455666666666666666664 2445555555 55666666665553 333322 3444555
Q ss_pred ccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCc
Q 037042 454 LSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533 (1002)
Q Consensus 454 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 533 (1002)
|++|++++..+..|..+++|+.|+|++|++.+..+. .+..+++|+.|+|++|+++
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~------------------------~~~~l~~L~~L~L~~N~l~- 254 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG------------------------SLSFLPTLRELHLDNNKLS- 254 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTT------------------------GGGGCTTCCEEECCSSCCC-
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChh------------------------HhhCCCCCCEEECCCCcCe-
Confidence 555555444444444444444444444444444444 4444455555555555554
Q ss_pred cCcccccCCccccEEEccCeeecccCCccccc------ccccceecccccccc--CCCcccccCCCccceeeCCCCc
Q 037042 534 VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGD------LMSLKSLNLSNNNLS--GSIPVSLEKLSYLKDLNLSFNK 602 (1002)
Q Consensus 534 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 602 (1002)
.+|..+..+++|+.|+|++|+|++..+..|.. ...|+.|++++|.+. +..|..|..+++|+.++|++|+
T Consensus 255 ~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 255 RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 33444555555555555555555444444433 244566666666655 4555566666666666666653
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=323.82 Aligned_cols=249 Identities=16% Similarity=0.148 Sum_probs=185.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--------chhHHHHHHHHHHHHhcc---------CCCccee
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--------GRAFKSFDVECEVMKSIR---------HRNIIKI 767 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~~ 767 (1002)
.++|+..+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688999999999999999987 68999999997542 223477889999999886 7777776
Q ss_pred eeEEecCch--------------------------hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHH
Q 037042 768 ISCCSIGDF--------------------------KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821 (1002)
Q Consensus 768 ~~~~~~~~~--------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~ 821 (1002)
.+++...+. .....++||||+++|++.+.+.+ ..+++..++.++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 665421100 01245799999999987777644 34899999999999999999
Q ss_pred HHHcCCCCCcEEccCCCCCeeeCCCC--------------------cEEEecccccccccCCCceeeeccCCCCcccccc
Q 037042 822 YLYFGYSTPVIHCDLKPSNVLLGDNM--------------------VAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881 (1002)
Q Consensus 822 ~LH~~~~~~iiHrDlkp~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aP 881 (1002)
|||+ +++|+||||||+|||++.++ .+||+|||+|+..... ...||+.||||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccCh
Confidence 9993 47899999999999999887 9999999999876532 23689999999
Q ss_pred cccCCCCcCcccchHHHHHH-HHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHH
Q 037042 882 EYGSEGRVSTNGDVYNFGVM-LMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFV 960 (1002)
Q Consensus 882 E~~~~~~~~~~~DvwSlGv~-l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l 960 (1002)
|++.+.. +.++||||+|++ .+++++|..||... .|.......-...+...... .......++..+
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~ 312 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLTDKMLKQMTFKTKC-----NTPAMKQIKRKI 312 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHHHHHHHTCCCSSCC-----CSHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHHHhhhhhhccCccc-----chhhhhhcCHHH
Confidence 9988766 899999998877 77888999998541 12111111101111111100 111234577889
Q ss_pred HHHHhHccccCCCCCCCHHHHH-HH
Q 037042 961 FNMAMECTVESPEKRINAKEIV-TR 984 (1002)
Q Consensus 961 ~~li~~cl~~~P~~Rpt~~evl-~~ 984 (1002)
.+++.+||+++ |++|++ +|
T Consensus 313 ~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHhccC-----CHHHHHhcC
Confidence 99999999976 999999 76
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=305.68 Aligned_cols=288 Identities=22% Similarity=0.246 Sum_probs=170.5
Q ss_pred ccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhcc
Q 037042 248 TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGL 327 (1002)
Q Consensus 248 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 327 (1002)
+++.++++++.++..... -.++|++|+|++|++++..+..|.++++|++|+|++|+++++.|..|+++++|++|+|
T Consensus 32 ~l~~l~~~~~~l~~lp~~----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKD----LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCCSCCCS----CCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCccccCcc----CCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 566666666655422111 1245555555555555544445555555555555555555555555555555555555
Q ss_pred ccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEcc
Q 037042 328 NNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLG 407 (1002)
Q Consensus 328 ~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 407 (1002)
++|+++.+|..+ .++|+.|++++|++++..+..|.++++|+.|+++
T Consensus 108 s~n~l~~l~~~~----------------------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 108 SKNQLKELPEKM----------------------------------PKTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CSSCCSBCCSSC----------------------------------CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CCCcCCccChhh----------------------------------cccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 555555443221 1345555666666665556667778888888888
Q ss_pred CCccCc--cCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc
Q 037042 408 GNNLNG--SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS 485 (1002)
Q Consensus 408 ~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 485 (1002)
+|.+.. ..+..|.++++|++|++++|.++. +|..+. ++|+.|+|++|++++..|..|..+++|+.|+|++|++++
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 887753 666777777888888888887773 444433 567777777777776666777777777777777777776
Q ss_pred cCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCC------ccccEEEccCeeecc--
Q 037042 486 VIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGI------KDLQFLFLEYNILQG-- 557 (1002)
Q Consensus 486 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~~-- 557 (1002)
..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|+|+++.+..|... ..|+.|++++|.+..
T Consensus 231 ~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~ 309 (330)
T 1xku_A 231 VDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWE 309 (330)
T ss_dssp ECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGG
T ss_pred eChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccc
Confidence 66666667777777777777766 455566666666666666666666555555432 344445555554432
Q ss_pred cCCcccccccccceeccccc
Q 037042 558 SIPDSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 558 ~~p~~~~~l~~L~~L~Ls~N 577 (1002)
..|..|..+.+|+.++|++|
T Consensus 310 i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 310 IQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SCGGGGTTCCCGGGEEC---
T ss_pred cCccccccccceeEEEeccc
Confidence 23344444444444444444
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=304.24 Aligned_cols=103 Identities=23% Similarity=0.288 Sum_probs=49.9
Q ss_pred CCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEc
Q 037042 78 SLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRL 157 (1002)
Q Consensus 78 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 157 (1002)
+|+.++++++.++ .+|..+. ++|++|+|++|+++ .+|...+.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4556666666555 4444432 34555555555554 233333344555555555555555444445555555555555
Q ss_pred ccccCCCCCccccccccccceeeecccccc
Q 037042 158 SYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 158 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
++|+++ .+|..+. ++|++|++++|+++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 134 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEIT 134 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCccc
Confidence 555544 3333332 34445555444444
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-35 Score=346.76 Aligned_cols=365 Identities=18% Similarity=0.178 Sum_probs=213.4
Q ss_pred CcEEEEEeCCCCCccccCcc-cCCCCCCCEEEcccCCCCC----CCCcccccccCCcEEEecccccccccCcccCCCCC-
Q 037042 53 HRVTALNISHLSLSGTIPSR-LGNLSSLQSLFLHSNQFSG----SIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLP- 126 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~-l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~- 126 (1002)
.+++.|||++++++...... +..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+.+..+..++..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 36889999999987654443 7888999999999999874 35677788899999999999887655555555555
Q ss_pred ---CCCEEeCCCCcccc----cCCccccCCCCCceEEcccccCCCCCccccc-----cccccceeeeccccccccccchh
Q 037042 127 ---FFESLNLSKNMFHG----GIPSALSNCTYLRILRLSYNDFAGGIPKEIG-----NLTKLEELYLSFNGLQGAYDHGF 194 (1002)
Q Consensus 127 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~ 194 (1002)
+|++|+|++|+++. .+|..+.++++|++|+|++|.+++..+..+. ..++|++|+|++|++++....
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-- 160 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE-- 160 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH--
Confidence 68888888888883 5677888888888888888888754444332 245788888888887752111
Q ss_pred hHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccccccccccc-ccccceeecccCCCccccCCccccCCCc
Q 037042 195 LQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFN-MSTIQGVGLQNNSLSGSLQSIPYVRLPN 273 (1002)
Q Consensus 195 ~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 273 (1002)
.++..+..+++|++|++++|++++..+..+.. +. ...++
T Consensus 161 -------------------~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~---------------------~~~~~ 200 (461)
T 1z7x_W 161 -------------------PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK---------------------DSPCQ 200 (461)
T ss_dssp -------------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHH---------------------HSCCC
T ss_pred -------------------HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHh---------------------cCCCC
Confidence 23455666778888888888876544443332 00 01234
Q ss_pred cchhhccccccccc----ccccccccCCCCeeecCCCccCCCC-----ccccccccccchhccccccCccchhhhhhhcc
Q 037042 274 LEELYLWGNHFSGS----IPNFIFNASKLSRLELQKNSFSGFI-----PSTFGNLRNLKRLGLNNNHLTSLTLELSFLSS 344 (1002)
Q Consensus 274 L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~ 344 (1002)
|++|+|++|++++. ++..+..+++|++|+|++|.+++.. +..+..+++|++|+|++|+++..... .+...
T Consensus 201 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~-~l~~~ 279 (461)
T 1z7x_W 201 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG-DLCRV 279 (461)
T ss_dssp CCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH-HHHHH
T ss_pred ceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHH-HHHHH
Confidence 44555555555432 3455556666777777776665432 22233466677777777766653211 01123
Q ss_pred cCCCCCCcEEeCCCCCCCCcccccccc---cccccccEEecCCCCCCCC----CCcccCCCCCccEEEccCCccCccCCc
Q 037042 345 LSNCKYLEFIDLSSNSIDGILSRKSVG---NLSHSLKIFDMSDCNVSGS----IPEEIGNLTNLIGFYLGGNNLNGSIPI 417 (1002)
Q Consensus 345 l~~l~~L~~L~Ls~N~l~~~~~~~~~~---~~~~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~ 417 (1002)
+..+++|++|+|++|.+.......... ...++|+.|++++|.+++. ++..+..+++|++|+|++|++++..+.
T Consensus 280 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 455666777777776664321111000 0112444444444444432 233344445555555555555433332
Q ss_pred cccC-----CCCCCEEEccCCcccc----cCCccccCCccccEEEccCCcCC
Q 037042 418 TLGK-----LQKLQVLYFPDNKLEG----SIPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 418 ~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
.+.. .++|++|+|++|.+++ .+|..+..+++|++|+|++|+++
T Consensus 360 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 360 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 2221 3444444554444443 33444444444444444444444
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-35 Score=344.47 Aligned_cols=387 Identities=19% Similarity=0.153 Sum_probs=223.5
Q ss_pred ccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccc----cccccccccc
Q 037042 173 LTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV----IPAEIFNMST 248 (1002)
Q Consensus 173 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~ 248 (1002)
+++|++|+|++|+++... +...+..+++|++|+|++|++++. ++..+..+++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~------------------------~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~ 57 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDAR------------------------WAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPA 57 (461)
T ss_dssp CEEEEEEEEESCCCCHHH------------------------HHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTT
T ss_pred CccceehhhhhcccCchh------------------------HHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCC
Confidence 357888999988887421 122356678899999999988753 4566667778
Q ss_pred cceeecccCCCccccCCccccCCC----ccchhhcccccccc----cccccccccCCCCeeecCCCccCCCCcccccc--
Q 037042 249 IQGVGLQNNSLSGSLQSIPYVRLP----NLEELYLWGNHFSG----SIPNFIFNASKLSRLELQKNSFSGFIPSTFGN-- 318 (1002)
Q Consensus 249 L~~L~L~~N~l~~~~~~~~~~~l~----~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-- 318 (1002)
|++|+|++|++.......-+..++ +|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+..
T Consensus 58 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l 137 (461)
T 1z7x_W 58 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGL 137 (461)
T ss_dssp CCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHH
T ss_pred cCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHH
Confidence 888888888775321111112233 57777777777663 44666666777777777777766544433322
Q ss_pred ---ccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCccc
Q 037042 319 ---LRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI 395 (1002)
Q Consensus 319 ---l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 395 (1002)
.++|++|+|++|+++..... .+...+..+++|++|++++|.+...........+.
T Consensus 138 ~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~--------------------- 195 (461)
T 1z7x_W 138 LDPQCRLEKLQLEYCSLSAASCE-PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK--------------------- 195 (461)
T ss_dssp TSTTCCCCEEECTTSCCBGGGHH-HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHH---------------------
T ss_pred hcCCCcceEEECCCCCCCHHHHH-HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHh---------------------
Confidence 34566777777666653321 11223445566666666666654321111000000
Q ss_pred CCCCCccEEEccCCccCcc----CCccccCCCCCCEEEccCCcccccC-----CccccCCccccEEEccCCcCCcc----
Q 037042 396 GNLTNLIGFYLGGNNLNGS----IPITLGKLQKLQVLYFPDNKLEGSI-----PDEVCRLAKVYQLDLSNNKLSGS---- 462 (1002)
Q Consensus 396 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~---- 462 (1002)
...++|++|+|++|++++. ++..+..+++|++|++++|.+++.. +..+..+++|++|+|++|.++..
T Consensus 196 ~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 275 (461)
T 1z7x_W 196 DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGD 275 (461)
T ss_dssp HSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHH
T ss_pred cCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHH
Confidence 0233555555555555532 3444555556666666666555321 12222455666666666666543
Q ss_pred CCccccCCccCcccccccccccccCCcccccc-----ccCceeeccCCCCCCC----CcccccccccceeeeCCCCccCc
Q 037042 463 IPACFGDLASLRNLSLASNELISVIPSTFWNL-----KDILYLNLSSNSLTGP----LPLEIGNLKVLVKIDFSMNNFSG 533 (1002)
Q Consensus 463 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~ 533 (1002)
++..+..+++|++|++++|.+.+..+..+... ++|++|++++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 276 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 276 LCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 34455556666666666666654433333332 4677777777776653 34455566777777777777765
Q ss_pred cCcccccC-----CccccEEEccCeeecc----cCCcccccccccceeccccccccCCCccccc-----CCCccceeeCC
Q 037042 534 VIPNAIGG-----IKDLQFLFLEYNILQG----SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLE-----KLSYLKDLNLS 599 (1002)
Q Consensus 534 ~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls 599 (1002)
..+..+.. .++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++.-...+. ...+|+.|++.
T Consensus 356 ~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~ 435 (461)
T 1z7x_W 356 AGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLY 435 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred ccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeec
Confidence 54444432 5677778888887775 5677777777788888888877643111111 13356666666
Q ss_pred CCcCcc
Q 037042 600 FNKLEG 605 (1002)
Q Consensus 600 ~N~l~~ 605 (1002)
+|.+..
T Consensus 436 ~~~~~~ 441 (461)
T 1z7x_W 436 DIYWSE 441 (461)
T ss_dssp TCCCCH
T ss_pred ccccCH
Confidence 666554
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-32 Score=303.58 Aligned_cols=287 Identities=21% Similarity=0.191 Sum_probs=215.7
Q ss_pred CCCCCCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccc
Q 037042 33 NWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ 112 (1002)
Q Consensus 33 ~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 112 (1002)
.|.....+|.|.|+ ||. ++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 22 ~~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 46667788999998 865 456666 6677665 488899999998886666688888899999999988
Q ss_pred cccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCc-cccccccccceeeecccc-ccccc
Q 037042 113 LSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIP-KEIGNLTKLEELYLSFNG-LQGAY 190 (1002)
Q Consensus 113 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~ 190 (1002)
+++ ++...|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..|.++++|++|++++|. +++
T Consensus 88 l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~-- 164 (353)
T 2z80_A 88 INT-IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTK-- 164 (353)
T ss_dssp CCE-ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCE--
T ss_pred cCc-cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccc--
Confidence 884 444555778889999999998886555568888899999999998884333 378888899999998884 542
Q ss_pred cchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccC
Q 037042 191 DHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVR 270 (1002)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 270 (1002)
..|..++++++|++|++++|++++..|..+..+++|++|++++|++. .++...+..
T Consensus 165 -----------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~ 220 (353)
T 2z80_A 165 -----------------------IQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDV 220 (353)
T ss_dssp -----------------------ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHH
T ss_pred -----------------------cCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhh
Confidence 23566788888889999988888888888888888888888888875 333334455
Q ss_pred CCccchhhccccccccccccccc---ccCCCCeeecCCCccCC----CCccccccccccchhccccccCccchhhhhhhc
Q 037042 271 LPNLEELYLWGNHFSGSIPNFIF---NASKLSRLELQKNSFSG----FIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLS 343 (1002)
Q Consensus 271 l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~ 343 (1002)
+++|++|+|++|++++..+..+. ....++.++|++|.+++ .+|..|.++++|++|+|++|+++.+|..+
T Consensus 221 ~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~---- 296 (353)
T 2z80_A 221 TSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGI---- 296 (353)
T ss_dssp TTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTT----
T ss_pred cccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHH----
Confidence 78888888888888876554433 35667788888888775 35777888888888888888888887643
Q ss_pred ccCCCCCCcEEeCCCCCCCCcc
Q 037042 344 SLSNCKYLEFIDLSSNSIDGIL 365 (1002)
Q Consensus 344 ~l~~l~~L~~L~Ls~N~l~~~~ 365 (1002)
|..+++|++|+|++|.+.+..
T Consensus 297 -~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 297 -FDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp -TTTCTTCCEEECCSSCBCCCH
T ss_pred -HhcCCCCCEEEeeCCCccCcC
Confidence 577888888888888877643
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-32 Score=302.19 Aligned_cols=268 Identities=21% Similarity=0.211 Sum_probs=166.6
Q ss_pred CCCCCCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCC-CCCCCcccc-------cccCCc
Q 037042 33 NWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQF-SGSIPFSIF-------NIHTLK 104 (1002)
Q Consensus 33 ~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l-~~~~p~~~~-------~l~~L~ 104 (1002)
+|.....|+.|..+.......+++.|++++|.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++|+
T Consensus 23 ~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~ 98 (312)
T 1wwl_A 23 DWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQ 98 (312)
T ss_dssp CGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCC
T ss_pred chHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCcc
Confidence 576666666666654443334577777778877 677766654 77778888887 445666665 677888
Q ss_pred EEEecccccccccCcccC-CCCCCCCEEeCCCCcccccCCccccCC-----CCCceEEcccccCCCCCccccccccccce
Q 037042 105 LLSFGDNQLSGEIPTNIC-SNLPFFESLNLSKNMFHGGIPSALSNC-----TYLRILRLSYNDFAGGIPKEIGNLTKLEE 178 (1002)
Q Consensus 105 ~L~L~~N~l~~~ip~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 178 (1002)
+|+|++|++++.+|..+| ..+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..|+++++|++
T Consensus 99 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 177 (312)
T 1wwl_A 99 ELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALST 177 (312)
T ss_dssp EEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCE
T ss_pred EEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCE
Confidence 888888888877777764 6778888888888888765 7777776 77888888888887766677888888888
Q ss_pred eeeccccccccccchhhHHhhhchhhcccCCcccCCCCccc--cCccccceeeccCcccccc--cc-cccccccccceee
Q 037042 179 LYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI--GNLRNLEVLALGLNKLVGV--IP-AEIFNMSTIQGVG 253 (1002)
Q Consensus 179 L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l--~~l~~L~~L~L~~N~l~~~--~p-~~~~~l~~L~~L~ 253 (1002)
|+|++|++.+.. .+|..+ +.+++|++|+|++|++++. ++ ..+.++++|+.|+
T Consensus 178 L~Ls~N~l~~~~-----------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~ 234 (312)
T 1wwl_A 178 LDLSDNPELGER-----------------------GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLD 234 (312)
T ss_dssp EECCSCTTCHHH-----------------------HHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEE
T ss_pred EECCCCCcCcch-----------------------HHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEE
Confidence 888888765421 122233 6677777777777777632 12 2233455566666
Q ss_pred cccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCc
Q 037042 254 LQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333 (1002)
Q Consensus 254 L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 333 (1002)
|++|++++.++...+..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|+++
T Consensus 235 Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 235 LSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 66665554433223333445555555555554 3344333 4445555555555443 32 444444444444444443
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-33 Score=338.18 Aligned_cols=466 Identities=15% Similarity=0.105 Sum_probs=240.7
Q ss_pred CCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCC---CCCCCcccc------------cccCC
Q 037042 39 SFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQF---SGSIPFSIF------------NIHTL 103 (1002)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l---~~~~p~~~~------------~l~~L 103 (1002)
-|++|.++.+... ..+.+. +.+...++..+..+++|++|+|+++.. .+.+|..++ .+++|
T Consensus 40 vck~W~~~~~~~~----~~l~~~-~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 40 VCRRWFKIDSETR----EHVTMA-LCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp SCHHHHHHHHHHC----CEEEES-CGGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HhHHHHHhhhccc----cEEEEe-eccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 3458999965432 233333 233444455677899999999988532 245554444 67889
Q ss_pred cEEEecccccccccCcccCCCCCC-CCEEeCCCCc-ccc-cCCccccCCCCCceEEcccccCCCC----Ccccccccccc
Q 037042 104 KLLSFGDNQLSGEIPTNICSNLPF-FESLNLSKNM-FHG-GIPSALSNCTYLRILRLSYNDFAGG----IPKEIGNLTKL 176 (1002)
Q Consensus 104 ~~L~L~~N~l~~~ip~~~~~~l~~-L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 176 (1002)
++|+|++|.+++..+..+...++. |++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+.++++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 999999998876655554332444 8999998886 321 2333445788899999999988765 44455677889
Q ss_pred ceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeeccc
Q 037042 177 EELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQN 256 (1002)
Q Consensus 177 ~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 256 (1002)
++|+|++|.+++.... .++..+.++++|++|++++|.+.+ +|..+..+++|+.|+++.
T Consensus 195 ~~L~L~~n~~~~~~~~---------------------~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPK---------------------DLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CEEECTTCCCSSCCHH---------------------HHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred cEEEeeccCCCccCHH---------------------HHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 9999998888743211 234455677889999999988886 567788888888888876
Q ss_pred CCCccc--cCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCc-cccccccccchhccccccCc
Q 037042 257 NSLSGS--LQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIP-STFGNLRNLKRLGLNNNHLT 333 (1002)
Q Consensus 257 N~l~~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 333 (1002)
+..... .....+..+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|++|+|+ |.+.
T Consensus 253 ~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~ 330 (592)
T 3ogk_B 253 LNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIG 330 (592)
T ss_dssp CCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGH
T ss_pred cccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccC
Confidence 332200 00112233444555555443222 344444444455555555544432222 123444444444444 2222
Q ss_pred cchhhhhhhcccCCCCCCcEEeCCC---CCCCCcccccccccccccccEEecCCCCCCCC-CCcccCCCCCccEEEccCC
Q 037042 334 SLTLELSFLSSLSNCKYLEFIDLSS---NSIDGILSRKSVGNLSHSLKIFDMSDCNVSGS-IPEEIGNLTNLIGFYLGGN 409 (1002)
Q Consensus 334 ~l~~~~~~~~~l~~l~~L~~L~Ls~---N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N 409 (1002)
..... ..+..+++|++|+|++ +..... ..|.+++. ++..+..+++|++|+++.|
T Consensus 331 ~~~l~----~~~~~~~~L~~L~L~~g~~~~~~~~------------------~~~~~~~~~~~~l~~~~~~L~~L~l~~~ 388 (592)
T 3ogk_B 331 DRGLE----VLAQYCKQLKRLRIERGADEQGMED------------------EEGLVSQRGLIALAQGCQELEYMAVYVS 388 (592)
T ss_dssp HHHHH----HHHHHCTTCCEEEEECCCCSSTTSS------------------TTCCCCHHHHHHHHHHCTTCSEEEEEES
T ss_pred HHHHH----HHHHhCCCCCEEEeecCcccccccc------------------ccCccCHHHHHHHHhhCccCeEEEeecC
Confidence 11000 0112233344444431 000000 01122111 1111223344444444444
Q ss_pred ccCccCCccccC-CCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCcc-----CCccccCCccCcccccccc--
Q 037042 410 NLNGSIPITLGK-LQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGS-----IPACFGDLASLRNLSLASN-- 481 (1002)
Q Consensus 410 ~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~L~~N-- 481 (1002)
++++..+..+.. +++|+.|+++++. ..|.+++. ++..+..+++|+.|++++|
T Consensus 389 ~l~~~~~~~l~~~~~~L~~L~l~~~~--------------------~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~ 448 (592)
T 3ogk_B 389 DITNESLESIGTYLKNLCDFRLVLLD--------------------REERITDLPLDNGVRSLLIGCKKLRRFAFYLRQG 448 (592)
T ss_dssp CCCHHHHHHHHHHCCSCCEEEEEECS--------------------CCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGG
T ss_pred CccHHHHHHHHhhCCCCcEEEEeecC--------------------CCccccCchHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 444333333332 4444444443000 13334321 2222344555555555432
Q ss_pred cccccCCccccc-cccCceeeccCCCCCC-CCcccccccccceeeeCCCCccCcc-CcccccCCccccEEEccCeeeccc
Q 037042 482 ELISVIPSTFWN-LKDILYLNLSSNSLTG-PLPLEIGNLKVLVKIDFSMNNFSGV-IPNAIGGIKDLQFLFLEYNILQGS 558 (1002)
Q Consensus 482 ~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~ 558 (1002)
.+++..+..+.. +++|++|++++|++++ .++..+.++++|+.|++++|.|++. ++..+..+++|++|+|++|++++.
T Consensus 449 ~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 449 GLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp GCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 233332333322 5566666666666654 2233345566666666666666543 233344566777777777776654
Q ss_pred CCcccc-cccccceeccc
Q 037042 559 IPDSFG-DLMSLKSLNLS 575 (1002)
Q Consensus 559 ~p~~~~-~l~~L~~L~Ls 575 (1002)
....+. .++.+....+.
T Consensus 529 ~~~~l~~~~p~l~~~~~~ 546 (592)
T 3ogk_B 529 GQDLMQMARPYWNIELIP 546 (592)
T ss_dssp CTTGGGGCCTTEEEEEEC
T ss_pred HHHHHHHhCCCcEEEEec
Confidence 332222 34444444443
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-30 Score=284.37 Aligned_cols=254 Identities=20% Similarity=0.220 Sum_probs=154.8
Q ss_pred CCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEeccccccc--
Q 037042 38 ISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG-- 115 (1002)
Q Consensus 38 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-- 115 (1002)
...|.|++|.|+. ++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++.
T Consensus 4 ~C~C~~~~l~c~~------------~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 4 RCSCSGTEIRCNS------------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp TCEEETTEEECCS------------SCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CCeeCCCEEEcCC------------CCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc
Confidence 3447888888764 3344 5566543 688899999998884333446788888888888888762
Q ss_pred ccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCc-cccccccccceeeeccccccccccchh
Q 037042 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIP-KEIGNLTKLEELYLSFNGLQGAYDHGF 194 (1002)
Q Consensus 116 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 194 (1002)
.+|..++ .+++|++|+|++|.++ .+|..+.++++|++|+|++|++++..+ ..+.++++|++|++++|.+++
T Consensus 69 ~~~~~~~-~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~------ 140 (306)
T 2z66_A 69 CCSQSDF-GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV------ 140 (306)
T ss_dssp EEEHHHH-SCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE------
T ss_pred Ccccccc-cccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc------
Confidence 2234433 4677777777777776 456667777777777777777765443 467777777777777777664
Q ss_pred hHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccc-ccccccccccccceeecccCCCccccCCccccCCCc
Q 037042 195 LQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG-VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPN 273 (1002)
Q Consensus 195 ~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 273 (1002)
..|..++.+++|++|+|++|++++ .+|..+..+++|++|++++|+
T Consensus 141 -------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~--------------- 186 (306)
T 2z66_A 141 -------------------AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ--------------- 186 (306)
T ss_dssp -------------------CSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC---------------
T ss_pred -------------------cchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC---------------
Confidence 244556666777777777777765 355555555555555444444
Q ss_pred cchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCC-CCCc
Q 037042 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNC-KYLE 352 (1002)
Q Consensus 274 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l-~~L~ 352 (1002)
+++..|..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++..+.. .+..+ ++|+
T Consensus 187 ----------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~~~~~L~ 251 (306)
T 2z66_A 187 ----------LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ-----ELQHFPSSLA 251 (306)
T ss_dssp ----------CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSS-----SCCCCCTTCC
T ss_pred ----------cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHH-----HHHhhhccCC
Confidence 4444444455555555555555555554444555555555555555555543321 23344 2555
Q ss_pred EEeCCCCCCCC
Q 037042 353 FIDLSSNSIDG 363 (1002)
Q Consensus 353 ~L~Ls~N~l~~ 363 (1002)
+|+|++|.+.+
T Consensus 252 ~L~L~~N~~~~ 262 (306)
T 2z66_A 252 FLNLTQNDFAC 262 (306)
T ss_dssp EEECTTCCEEC
T ss_pred EEEccCCCeec
Confidence 55555555544
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-30 Score=281.48 Aligned_cols=282 Identities=21% Similarity=0.249 Sum_probs=165.9
Q ss_pred hhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEe
Q 037042 276 ELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFID 355 (1002)
Q Consensus 276 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~ 355 (1002)
.++++++.++ .+|..+. ++|++|+|++|+++.+.+..|.++++|++|+|++|+++.+.... ..+..+++|++|+
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~~~~~~L~~L~ 84 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS---QSDFGTTSLKYLD 84 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE---HHHHSCSCCCEEE
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc---cccccccccCEEE
Confidence 3444555554 3343332 46666666666666555555666666666666666665442100 1123345555555
Q ss_pred CCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCC-ccccCCCCCCEEEccCCc
Q 037042 356 LSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLYFPDNK 434 (1002)
Q Consensus 356 Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 434 (1002)
|++|.+.. +|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.
T Consensus 85 Ls~n~i~~---------------------------l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~ 137 (306)
T 2z66_A 85 LSFNGVIT---------------------------MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 137 (306)
T ss_dssp CCSCSEEE---------------------------EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSC
T ss_pred CCCCcccc---------------------------ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCc
Confidence 55554432 23345556666666666666665444 456666666666666666
Q ss_pred ccccCCccccCCccccEEEccCCcCCc-cCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcc
Q 037042 435 LEGSIPDEVCRLAKVYQLDLSNNKLSG-SIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL 513 (1002)
Q Consensus 435 l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 513 (1002)
+.+..+..+..+++|++|+|++|.+++ ..|..|..+++|+.|++++|++++..|..|.++++|++|++++|++++..+.
T Consensus 138 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 217 (306)
T 2z66_A 138 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 217 (306)
T ss_dssp CEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSG
T ss_pred CCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChh
Confidence 666666666666666666666666664 4566666666666666666666666666666666666666666666665555
Q ss_pred cccccccceeeeCCCCccCccCcccccCCc-cccEEEccCeeecccCC--cccccccccceeccccccccCCCcccccCC
Q 037042 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIK-DLQFLFLEYNILQGSIP--DSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590 (1002)
Q Consensus 514 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 590 (1002)
.+..+++|+.|+|++|++++..|..+..++ +|+.|+|++|.+++..+ .....+..++.+....+.+....|..+.+.
T Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 218 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGM 297 (306)
T ss_dssp GGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTC
T ss_pred hccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCc
Confidence 666666677777777777666666666663 67777777777664321 112233444555555666666666655543
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=303.42 Aligned_cols=290 Identities=23% Similarity=0.300 Sum_probs=180.7
Q ss_pred cCCCCCCCCCcccccEee------CCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcE
Q 037042 32 KNWNSSISFCNWTGVTCD------VHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKL 105 (1002)
Q Consensus 32 ~~w~~~~~~c~w~gv~c~------~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 105 (1002)
+.|..+.+||.|+|..|. .....++.|++++|+++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++
T Consensus 13 ~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~ 85 (622)
T 3g06_A 13 SAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRT 85 (622)
T ss_dssp HHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCE
T ss_pred HHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCE
Confidence 368878889999775432 12234788999999988 7787776 78888888888888 5665 5677888
Q ss_pred EEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeecccc
Q 037042 106 LSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNG 185 (1002)
Q Consensus 106 L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 185 (1002)
|+|++|+|+ .+|. .+++|++|+|++|.+++ +|. .+++|++|+|++|+|+ .+|.. +++|++|+|++|+
T Consensus 86 L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 86 LEVSGNQLT-SLPV----LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQ 152 (622)
T ss_dssp EEECSCCCS-CCCC----CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSC
T ss_pred EEcCCCcCC-cCCC----CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcCCc
Confidence 888888876 4665 46777777777777774 443 4566777777777776 34543 3666677777766
Q ss_pred ccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCC
Q 037042 186 LQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQS 265 (1002)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 265 (1002)
+++ +|. .+.+|+.|++++|+|+++ | .
T Consensus 153 l~~--------------------------l~~---~~~~L~~L~L~~N~l~~l-~---~--------------------- 178 (622)
T 3g06_A 153 LAS--------------------------LPA---LPSELCKLWAYNNQLTSL-P---M--------------------- 178 (622)
T ss_dssp CSC--------------------------CCC---CCTTCCEEECCSSCCSCC-C---C---------------------
T ss_pred CCC--------------------------cCC---ccCCCCEEECCCCCCCCC-c---c---------------------
Confidence 653 222 124455556666655532 2 1
Q ss_pred ccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhccc
Q 037042 266 IPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL 345 (1002)
Q Consensus 266 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l 345 (1002)
.+++|+.|+|++|++++ +|.. +++|+.|++++|.|+.+ |.. +++|+.|+|++|+|+.+|
T Consensus 179 ----~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-~~~---~~~L~~L~Ls~N~L~~lp--------- 237 (622)
T 3g06_A 179 ----LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-PAL---PSGLKELIVSGNRLTSLP--------- 237 (622)
T ss_dssp ----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCSCCC---------
T ss_pred ----cCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-CCC---CCCCCEEEccCCccCcCC---------
Confidence 12344444444444442 2221 24555555555555532 211 244444445444444433
Q ss_pred CCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCC
Q 037042 346 SNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKL 425 (1002)
Q Consensus 346 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 425 (1002)
..++ +|+.|++++|+|++ +|. .+++|+.|+|++|+|+ .+|..|.++++|
T Consensus 238 ~~l~--------------------------~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L 286 (622)
T 3g06_A 238 VLPS--------------------------ELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSE 286 (622)
T ss_dssp CCCT--------------------------TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTT
T ss_pred CCCC--------------------------cCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhcccc
Confidence 1123 44555555555542 333 4567888888888888 667888889999
Q ss_pred CEEEccCCcccccCCccccCCc
Q 037042 426 QVLYFPDNKLEGSIPDEVCRLA 447 (1002)
Q Consensus 426 ~~L~L~~N~l~~~~p~~~~~l~ 447 (1002)
+.|+|++|.+++.+|..+..++
T Consensus 287 ~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 287 TTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CEEECCSCCCCHHHHHHHHHHH
T ss_pred CEEEecCCCCCCcCHHHHHhcc
Confidence 9999999999888877766544
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-30 Score=288.68 Aligned_cols=278 Identities=19% Similarity=0.209 Sum_probs=157.2
Q ss_pred ccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCc
Q 037042 273 NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLE 352 (1002)
Q Consensus 273 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~ 352 (1002)
.....++++|.++ .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+++.++.. .|.++++|+
T Consensus 32 ~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~ 103 (353)
T 2z80_A 32 RNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEED-----SFSSLGSLE 103 (353)
T ss_dssp TTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT-----TTTTCTTCC
T ss_pred CCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHh-----hcCCCCCCC
Confidence 3344566666665 3444332 3566666666666655555555555555555555555554322 234444444
Q ss_pred EEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCC-ccccCCCCCCEEEcc
Q 037042 353 FIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLYFP 431 (1002)
Q Consensus 353 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~ 431 (1002)
+|+|++|+|++ ..+..|+++++|++|+|++|++++..+ ..|.++++|++|+++
T Consensus 104 ~L~Ls~n~l~~--------------------------~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~ 157 (353)
T 2z80_A 104 HLDLSYNYLSN--------------------------LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVG 157 (353)
T ss_dssp EEECCSSCCSS--------------------------CCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEE
T ss_pred EEECCCCcCCc--------------------------CCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECC
Confidence 44444443332 222335555566666666666553333 345555555555555
Q ss_pred CC-cccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCC
Q 037042 432 DN-KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510 (1002)
Q Consensus 432 ~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 510 (1002)
+| .+.+..+..+..+++|+.|++++|++++..|..|..+++|++|++++|++....+..+..+++|+.|++++|+++
T Consensus 158 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~-- 235 (353)
T 2z80_A 158 NMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD-- 235 (353)
T ss_dssp ESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT--
T ss_pred CCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc--
Confidence 55 344444445555555555555555555555555555555555555555554433333334445555555555544
Q ss_pred CcccccccccceeeeCCCCccCccCccccc---CCccccEEEccCeeecc----cCCcccccccccceeccccccccCCC
Q 037042 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIG---GIKDLQFLFLEYNILQG----SIPDSFGDLMSLKSLNLSNNNLSGSI 583 (1002)
Q Consensus 511 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~ 583 (1002)
+..+..+. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+|+ .+
T Consensus 236 ----------------------~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i 292 (353)
T 2z80_A 236 ----------------------TFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SV 292 (353)
T ss_dssp ----------------------TCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CC
T ss_pred ----------------------cccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-cc
Confidence 43332222 24556677777777765 36778888899999999999998 45
Q ss_pred ccc-ccCCCccceeeCCCCcCcccCCC
Q 037042 584 PVS-LEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 584 p~~-~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
|.. |..+++|++|+|++|+++|.+|.
T Consensus 293 ~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 293 PDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 554 58899999999999999988773
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-29 Score=289.68 Aligned_cols=233 Identities=24% Similarity=0.302 Sum_probs=213.8
Q ss_pred cccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEE
Q 037042 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453 (1002)
Q Consensus 374 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 453 (1002)
+.+++.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 74 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 74 PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 35677788888888877888999999999999999999999999999999999999999999988888899999999999
Q ss_pred ccCCcCCccCCccccCCccCccccccc-ccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccC
Q 037042 454 LSNNKLSGSIPACFGDLASLRNLSLAS-NELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFS 532 (1002)
Q Consensus 454 Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 532 (1002)
|++|+|+...+..|..+++|+.|++++ |.+..+.+..|.++++|++|+|++|++++. | .+..+++|+.|+|++|+|+
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCc
Confidence 999999988888999999999999999 566666666899999999999999999964 4 5889999999999999999
Q ss_pred ccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 533 GVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 533 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
+..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 232 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 9999999999999999999999999999999999999999999999998888889999999999999999987654
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-32 Score=331.10 Aligned_cols=403 Identities=11% Similarity=0.029 Sum_probs=223.1
Q ss_pred CCCCCceEEcccccCCCCCccccccc--cccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCcccc
Q 037042 148 NCTYLRILRLSYNDFAGGIPKEIGNL--TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL 225 (1002)
Q Consensus 148 ~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L 225 (1002)
++++|++|+|++|.+++..+..+... .+|++|+|++|.-. .+. .++....++++|
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~--~~~---------------------~l~~~~~~~~~L 166 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGF--TTD---------------------GLLSIVTHCRKI 166 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEE--EHH---------------------HHHHHHHHCTTC
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCc--CHH---------------------HHHHHHhhCCCC
Confidence 66777777777777766555556553 34777777776511 000 112223456777
Q ss_pred ceeeccCcccccc----cccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCee
Q 037042 226 EVLALGLNKLVGV----IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRL 301 (1002)
Q Consensus 226 ~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 301 (1002)
++|+|++|.+++. ++..+.++++|+.|++++|.+++.-. +.++..+.++++|++|
T Consensus 167 ~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~---------------------~~l~~~~~~~~~L~~L 225 (592)
T 3ogk_B 167 KTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISP---------------------KDLETIARNCRSLVSV 225 (592)
T ss_dssp SEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCH---------------------HHHHHHHHHCTTCCEE
T ss_pred CEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCH---------------------HHHHHHHhhCCCCcEE
Confidence 7777777776654 23333444555555555554431000 1122233344455555
Q ss_pred ecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEe
Q 037042 302 ELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFD 381 (1002)
Q Consensus 302 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 381 (1002)
+|++|.+.+ +|..+.++++|++|+++.+....-. ......+..+++|+.|+++++....+. ......++|+.|+
T Consensus 226 ~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~--~~~~~~l~~~~~L~~L~l~~~~~~~l~---~~~~~~~~L~~L~ 299 (592)
T 3ogk_B 226 KVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM--PEKYMNLVFPRKLCRLGLSYMGPNEMP---ILFPFAAQIRKLD 299 (592)
T ss_dssp ECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC--TTSSSCCCCCTTCCEEEETTCCTTTGG---GGGGGGGGCCEEE
T ss_pred eccCccHHH-HHHHHhhhhHHHhhcccccccccch--HHHHHHhhccccccccCccccchhHHH---HHHhhcCCCcEEe
Confidence 555555443 3344455555555555432111000 011123445555555555554322221 1111223455555
Q ss_pred cCCCCCCCCCC-cccCCCCCccEEEccCCccC-ccCCccccCCCCCCEEEcc-----------CCccccc-CCccccCCc
Q 037042 382 MSDCNVSGSIP-EEIGNLTNLIGFYLGGNNLN-GSIPITLGKLQKLQVLYFP-----------DNKLEGS-IPDEVCRLA 447 (1002)
Q Consensus 382 L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~-----------~N~l~~~-~p~~~~~l~ 447 (1002)
+++|.+++... ..+..+++|+.|+++ |.+. +.++..+..+++|++|+++ .|.+++. ++..+..++
T Consensus 300 Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 378 (592)
T 3ogk_B 300 LLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQ 378 (592)
T ss_dssp ETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCT
T ss_pred cCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCc
Confidence 55555443322 335677778888777 3333 3334444567778888887 3555543 222234467
Q ss_pred cccEEEccCCcCCccCCccccC-CccCcccccc----ccccccc-----CCccccccccCceeeccCC--CCCCCCcccc
Q 037042 448 KVYQLDLSNNKLSGSIPACFGD-LASLRNLSLA----SNELISV-----IPSTFWNLKDILYLNLSSN--SLTGPLPLEI 515 (1002)
Q Consensus 448 ~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~~~~~ 515 (1002)
+|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|++|++++| .+++..+..+
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 7888888777777665555554 7778888885 5666653 3334666788888888643 3554433344
Q ss_pred c-ccccceeeeCCCCccCc-cCcccccCCccccEEEccCeeeccc-CCcccccccccceeccccccccCCCcccc-cCCC
Q 037042 516 G-NLKVLVKIDFSMNNFSG-VIPNAIGGIKDLQFLFLEYNILQGS-IPDSFGDLMSLKSLNLSNNNLSGSIPVSL-EKLS 591 (1002)
Q Consensus 516 ~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~ 591 (1002)
. .+++|+.|++++|++++ .++..+.++++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++.-...+ ..++
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p 538 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARP 538 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCT
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCC
Confidence 3 36778888888888775 3345557778888888888887654 33344567788888888888775433333 3456
Q ss_pred ccceeeCCCC
Q 037042 592 YLKDLNLSFN 601 (1002)
Q Consensus 592 ~L~~L~Ls~N 601 (1002)
.+....+..+
T Consensus 539 ~l~~~~~~~~ 548 (592)
T 3ogk_B 539 YWNIELIPSR 548 (592)
T ss_dssp TEEEEEECCC
T ss_pred CcEEEEecCc
Confidence 6666555554
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=286.65 Aligned_cols=232 Identities=24% Similarity=0.307 Sum_probs=210.9
Q ss_pred ccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEc
Q 037042 375 HSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDL 454 (1002)
Q Consensus 375 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 454 (1002)
.+++.|+|++|+|++..+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 46677777777777777788999999999999999999888899999999999999999999777778999999999999
Q ss_pred cCCcCCccCCccccCCccCccccccc-ccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCc
Q 037042 455 SNNKLSGSIPACFGDLASLRNLSLAS-NELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533 (1002)
Q Consensus 455 s~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 533 (1002)
++|+|+...+..|..+++|+.|+|++ |.+..+.+..|.++++|++|+|++|+++. +| .+..+++|+.|+|++|+|++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCc
Confidence 99999988888999999999999999 45666666689999999999999999995 44 58899999999999999999
Q ss_pred cCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 534 VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 534 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.+...
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 999999999999999999999999999999999999999999999998888889999999999999999987543
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=286.22 Aligned_cols=244 Identities=25% Similarity=0.304 Sum_probs=158.3
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.++.++.+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|+ .++...|.++++|++|+|++|
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSS
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcccCCEEECCCC
Confidence 3445555555 4555443 46666666666666655666666666666666666665 333344455666666666666
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccc-cccccccchhhHHhhhchhhcccCCcccCCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI 215 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 215 (1002)
+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++| .++ .+
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~--------------------------~i 187 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLE--------------------------YI 187 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCC--------------------------EE
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCcc--------------------------cc
Confidence 666544455556666666666666665444445555666666666553 222 12
Q ss_pred C-ccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccc
Q 037042 216 P-NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294 (1002)
Q Consensus 216 p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 294 (1002)
| ..+.++++|++|+|++|++++. + .+..+++|++|+|++|++++..|..|.+
T Consensus 188 ~~~~~~~l~~L~~L~L~~n~l~~~-------------------------~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 240 (452)
T 3zyi_A 188 SEGAFEGLFNLKYLNLGMCNIKDM-------------------------P--NLTPLVGLEELEMSGNHFPEIRPGSFHG 240 (452)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSSC-------------------------C--CCTTCTTCCEEECTTSCCSEECGGGGTT
T ss_pred ChhhccCCCCCCEEECCCCccccc-------------------------c--cccccccccEEECcCCcCcccCcccccC
Confidence 2 2344555555555555555432 1 1345677888888888888888888888
Q ss_pred cCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 295 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
+++|++|+|++|+|+++.|..|.++++|+.|+|++|+|+.++.+. |..+++|+.|+|++|.+.
T Consensus 241 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-----~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 241 LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDL-----FTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTS-----STTCTTCCEEECCSSCEE
T ss_pred ccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHH-----hccccCCCEEEccCCCcC
Confidence 889999999999998888888888899999999999888887653 677888888888888765
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=272.30 Aligned_cols=211 Identities=28% Similarity=0.317 Sum_probs=130.6
Q ss_pred CCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCc-CCccCCccccCCccCcccc
Q 037042 399 TNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNK-LSGSIPACFGDLASLRNLS 477 (1002)
Q Consensus 399 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 477 (1002)
++|++|++++|++++..+..|..+++|++|+|++|.+++..|..+..+++|++|+|++|+ ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 355555555555555555555555666666666666555555555556666666666664 5544455566666666666
Q ss_pred cccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecc
Q 037042 478 LASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 478 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 557 (1002)
+++|.+.+..|..|.++++|++|++++|++++..+..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|.+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 66666666555566666666666666666665555556666666666666666665555566666666666666666666
Q ss_pred cCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCC
Q 037042 558 SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 558 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++.+..+.
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 6666666666666666666666655555566666666666666666655443
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-29 Score=269.96 Aligned_cols=253 Identities=20% Similarity=0.228 Sum_probs=200.2
Q ss_pred cEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEcc
Q 037042 352 EFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431 (1002)
Q Consensus 352 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 431 (1002)
+.++.+++.++.++. .++++|+.|++++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+++
T Consensus 14 ~~~~c~~~~l~~ip~-----~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 88 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPV-----GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88 (285)
T ss_dssp CEEECCSSCCSSCCT-----TCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred eEEEcCcCCcccCCc-----CCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCC
Confidence 344555555544321 123466777777777776666778888888889998888888888888888889999998
Q ss_pred CCc-ccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCC
Q 037042 432 DNK-LEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510 (1002)
Q Consensus 432 ~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 510 (1002)
+|. ++...|..+..+++|++|+|++|++++..|..|..+++|++|++++|++.+..+..|.++++|++|++++|++++.
T Consensus 89 ~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 887 7766678888888899999999988888788888888899999999988888777788888899999999988876
Q ss_pred CcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCC
Q 037042 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590 (1002)
Q Consensus 511 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 590 (1002)
.+..|..+++|+.|++++|.+++..|..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++....+.. .-+
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~ 247 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLW 247 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHH
Confidence 6667888889999999999998888888888899999999999998777777888889999999999888644321 122
Q ss_pred CccceeeCCCCcCcccCCCC
Q 037042 591 SYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 591 ~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
..++.+..+.|.+.+..|..
T Consensus 248 ~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHHHCCSEECCCBEEESGG
T ss_pred HHHHhcccccCccccCCchH
Confidence 44666677788888887763
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=273.57 Aligned_cols=224 Identities=18% Similarity=0.262 Sum_probs=191.4
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEcc
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
.++.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 4555555566655 55666777888888888888887 67777888888888888888887 677778888888888888
Q ss_pred CCcCCccCCcccc---------CCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeC
Q 037042 456 NNKLSGSIPACFG---------DLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDF 526 (1002)
Q Consensus 456 ~N~l~~~~p~~~~---------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 526 (1002)
+|++.+.+|..+. .+++|++|+|++|+++ .+|..+.++++|++|++++|++++ +|..+..+++|+.|+|
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDL 236 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEEC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEEC
Confidence 8777777777665 4999999999999998 568889999999999999999996 5667999999999999
Q ss_pred CCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCc
Q 037042 527 SMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604 (1002)
Q Consensus 527 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1002)
++|++.+.+|..|+++++|+.|+|++|.+.+.+|..|..+++|+.|+|++|++.+.+|..+.++++|+.++++.|.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987765
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-30 Score=282.65 Aligned_cols=203 Identities=18% Similarity=0.221 Sum_probs=124.7
Q ss_pred CCCCccEEEccCCccCccCCccc--cCCCCCCEEEccCCcccccCCccccCC-----ccccEEEccCCcCCccCCccccC
Q 037042 397 NLTNLIGFYLGGNNLNGSIPITL--GKLQKLQVLYFPDNKLEGSIPDEVCRL-----AKVYQLDLSNNKLSGSIPACFGD 469 (1002)
Q Consensus 397 ~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~ 469 (1002)
++++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 34455555555555555555443 4555555555555555544 4444444 55555566666555555555556
Q ss_pred CccCccccccccccccc--CCccc--cccccCceeeccCCCCCCC---CcccccccccceeeeCCCCccCccCc-ccccC
Q 037042 470 LASLRNLSLASNELISV--IPSTF--WNLKDILYLNLSSNSLTGP---LPLEIGNLKVLVKIDFSMNNFSGVIP-NAIGG 541 (1002)
Q Consensus 470 l~~L~~L~L~~N~l~~~--~~~~~--~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 541 (1002)
+++|++|+|++|++.+. .+..+ .++++|++|+|++|++++. ....+.++++|+.|+|++|++++.+| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 66666666666655443 12222 5666666666666666631 11233456677777777777776654 44556
Q ss_pred CccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcc
Q 037042 542 IKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 542 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
+++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 777888888888877 5666665 7788888888888765 55 7788888888888888875
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-29 Score=296.66 Aligned_cols=215 Identities=21% Similarity=0.186 Sum_probs=173.3
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEcc
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
+|+.|+|++|++++..|..|+.+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|+.|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 56666666667776677788888888888888888887665 8888888888888888885433 2788888888
Q ss_pred CCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCccccc-ccccceeeeCCCCccCcc
Q 037042 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG-NLKVLVKIDFSMNNFSGV 534 (1002)
Q Consensus 456 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~ 534 (1002)
+|.|++..+.. +++|+.|+|++|.+++..|..|+++++|++|+|++|.+++..|..+. .+++|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 88888765543 56788888888888888888888888888899988888887777775 788888899999988876
Q ss_pred CcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCc
Q 037042 535 IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604 (1002)
Q Consensus 535 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1002)
.+ +..+++|+.|+|++|.|++.+| .|..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++.
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred cc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 33 3458888999999999886444 58888889999999998885 6777888888999999999888
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-29 Score=278.79 Aligned_cols=266 Identities=20% Similarity=0.172 Sum_probs=159.2
Q ss_pred cchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcE
Q 037042 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353 (1002)
Q Consensus 274 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~ 353 (1002)
++.++++.+.+...++..+..+++|++|+|++|+|++..|..|+++++|++|+|++|+++.++. +..+++|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-------~~~l~~L~~ 84 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-------LESLSTLRT 84 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-------ETTCTTCCE
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-------hhhcCCCCE
Confidence 4455667777765555556667788888888888888877888888888888888888876542 667777777
Q ss_pred EeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCC
Q 037042 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDN 433 (1002)
Q Consensus 354 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 433 (1002)
|+|++|.|+++.. .++|++|++++|++++..+.. +++|++|++++|
T Consensus 85 L~Ls~n~l~~l~~-------------------------------~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N 130 (317)
T 3o53_A 85 LDLNNNYVQELLV-------------------------------GPSIETLHAANNNISRVSCSR---GQGKKNIYLANN 130 (317)
T ss_dssp EECCSSEEEEEEE-------------------------------CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSS
T ss_pred EECcCCccccccC-------------------------------CCCcCEEECCCCccCCcCccc---cCCCCEEECCCC
Confidence 7777777664421 134444444444444332222 344555555555
Q ss_pred cccccCCccccCCccccEEEccCCcCCccCCccc-cCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCc
Q 037042 434 KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACF-GDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLP 512 (1002)
Q Consensus 434 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 512 (1002)
++++..+..+..+++|++|+|++|++++..+..+ ..+++|++|+|++|++++..+ ...+++|++|+|++|++++. |
T Consensus 131 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~ 207 (317)
T 3o53_A 131 KITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-G 207 (317)
T ss_dssp CCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-C
T ss_pred CCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-h
Confidence 5554444455555555555555555554444444 245555555555555554421 22355666666666666643 3
Q ss_pred ccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeec-ccCCcccccccccceeccc-cccccCCCc
Q 037042 513 LEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ-GSIPDSFGDLMSLKSLNLS-NNNLSGSIP 584 (1002)
Q Consensus 513 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p 584 (1002)
..+..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|.+. +.+|..+..+++|+.|+++ .+.++|..|
T Consensus 208 ~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 208 PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred hhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 336666666666666666663 4555666666666666666666 5566666666666666666 334554433
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-28 Score=279.53 Aligned_cols=246 Identities=24% Similarity=0.276 Sum_probs=191.5
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
..++.++.+++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|+++ .++...|.++++|++|+|++
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EECGGGGTTCSSCCEEECCS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccChhhccCCccCCEEECCC
Confidence 46777788887 7787775 68999999999999888888999999999999999887 55666667888888888888
Q ss_pred CcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI 215 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 215 (1002)
|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|...+ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~-------------------------~i 176 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLS-------------------------YI 176 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCC-------------------------EE
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcc-------------------------ee
Confidence 88886666678888888888888888886666678888888888888744321 22
Q ss_pred C-ccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccc
Q 037042 216 P-NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294 (1002)
Q Consensus 216 p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 294 (1002)
| ..|.++++|++|+|++|+++.+ |. +..+++|++|+|++|++++..|..|.+
T Consensus 177 ~~~~~~~l~~L~~L~L~~n~l~~~-~~--------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 229 (440)
T 3zyj_A 177 SEGAFEGLSNLRYLNLAMCNLREI-PN--------------------------LTPLIKLDELDLSGNHLSAIRPGSFQG 229 (440)
T ss_dssp CTTTTTTCSSCCEEECTTSCCSSC-CC--------------------------CTTCSSCCEEECTTSCCCEECTTTTTT
T ss_pred CcchhhcccccCeecCCCCcCccc-cc--------------------------cCCCcccCEEECCCCccCccChhhhcc
Confidence 2 3566777777777777777632 21 234567777777777777777888888
Q ss_pred cCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 295 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
+++|++|+|++|+|+++.+..|.++++|+.|+|++|+|+.++.+. |..+++|+.|+|++|.+.
T Consensus 230 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-----~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 230 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDL-----FTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTT-----TSSCTTCCEEECCSSCEE
T ss_pred CccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhH-----hccccCCCEEEcCCCCcc
Confidence 888888888888888888888888888888888888888877653 677888888888888765
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=283.63 Aligned_cols=269 Identities=24% Similarity=0.318 Sum_probs=159.0
Q ss_pred cCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceee
Q 037042 101 HTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELY 180 (1002)
Q Consensus 101 ~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 180 (1002)
.++++|++++|.|+ .+|..++ ++|++|+|++|.|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEE
Confidence 35777777777777 6776653 56777777777777 4554 4567777777777776 4554 556677777
Q ss_pred eccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCc
Q 037042 181 LSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260 (1002)
Q Consensus 181 Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 260 (1002)
|++|++++ +|. .+++|+.|++++|+|++ +|..
T Consensus 108 Ls~N~l~~--------------------------l~~---~l~~L~~L~L~~N~l~~-lp~~------------------ 139 (622)
T 3g06_A 108 IFSNPLTH--------------------------LPA---LPSGLCKLWIFGNQLTS-LPVL------------------ 139 (622)
T ss_dssp ECSCCCCC--------------------------CCC---CCTTCCEEECCSSCCSC-CCCC------------------
T ss_pred CcCCcCCC--------------------------CCC---CCCCcCEEECCCCCCCc-CCCC------------------
Confidence 77776663 333 34556666666666654 2221
Q ss_pred cccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhh
Q 037042 261 GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340 (1002)
Q Consensus 261 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~ 340 (1002)
+++|++|+|++|++++ +|. .+.+|+.|++++|+|+++ | ..+++|+.|+|++|+|+.+|.
T Consensus 140 ----------l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~l~~--- 198 (622)
T 3g06_A 140 ----------PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTSL-P---MLPSGLQELSVSDNQLASLPT--- 198 (622)
T ss_dssp ----------CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSCCCC---
T ss_pred ----------CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCCC-c---ccCCCCcEEECCCCCCCCCCC---
Confidence 1344444444444442 222 124455555555555542 2 234455555555555554432
Q ss_pred hhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCcccc
Q 037042 341 FLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLG 420 (1002)
Q Consensus 341 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 420 (1002)
.+++|+.|++++|.|+.+ |.. +++|+.|+|++|+|++ +| .
T Consensus 199 ------~~~~L~~L~L~~N~l~~l---------------------------~~~---~~~L~~L~Ls~N~L~~-lp---~ 238 (622)
T 3g06_A 199 ------LPSELYKLWAYNNRLTSL---------------------------PAL---PSGLKELIVSGNRLTS-LP---V 238 (622)
T ss_dssp ------CCTTCCEEECCSSCCSSC---------------------------CCC---CTTCCEEECCSSCCSC-CC---C
T ss_pred ------ccchhhEEECcCCccccc---------------------------CCC---CCCCCEEEccCCccCc-CC---C
Confidence 123444444444444432 221 2456666666666664 33 3
Q ss_pred CCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccc
Q 037042 421 KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLK 495 (1002)
Q Consensus 421 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 495 (1002)
.+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|.+++..|..+..++
T Consensus 239 ~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 239 LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 4466777777777776 3444 4567777778777777 5677777788888888888888777777666655
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-29 Score=277.73 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=51.3
Q ss_pred CCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCC-ccCCccccCCccCccc
Q 037042 398 LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS-GSIPACFGDLASLRNL 476 (1002)
Q Consensus 398 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L 476 (1002)
+++|++|+|++|++++. |..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+. +.+|..+..+++|+.|
T Consensus 190 l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l 267 (317)
T 3o53_A 190 FAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTV 267 (317)
T ss_dssp CTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHH
T ss_pred cccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEE
Confidence 44555555555555533 233555666666666666665 34555666666666666666666 5556666666777777
Q ss_pred ccccc-cccccCC
Q 037042 477 SLASN-ELISVIP 488 (1002)
Q Consensus 477 ~L~~N-~l~~~~~ 488 (1002)
++++| .+.+..|
T Consensus 268 ~l~~~~~l~~~~~ 280 (317)
T 3o53_A 268 AKQTVKKLTGQNE 280 (317)
T ss_dssp HHHHHHHHHSSSS
T ss_pred ECCCchhccCCch
Confidence 76633 4444433
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=254.86 Aligned_cols=218 Identities=25% Similarity=0.329 Sum_probs=176.0
Q ss_pred CCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEeccccccccc
Q 037042 38 ISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117 (1002)
Q Consensus 38 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i 117 (1002)
.++|.|.|+.|+... .++.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++ .+
T Consensus 2 ~~~C~~~~~~C~c~~-~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i 76 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN-NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TL 76 (270)
T ss_dssp CCCBGGGTCSBEEET-TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CC
T ss_pred CccCCCCCCCCEeCC-CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-ee
Confidence 478999999998743 4678999999999 5887765 68999999999999777778999999999999999998 78
Q ss_pred CcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHH
Q 037042 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQI 197 (1002)
Q Consensus 118 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 197 (1002)
|..+|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-------- 148 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL-------- 148 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC--------
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCcc--------
Confidence 888888999999999999999977777889999999999999999987788889999999999999998742
Q ss_pred hhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchh
Q 037042 198 FVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277 (1002)
Q Consensus 198 ~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 277 (1002)
.+..++.+++|++|+|++|+++++.+..|..+++|+.|+
T Consensus 149 -----------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~------------------------ 187 (270)
T 2o6q_A 149 -----------------PKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK------------------------ 187 (270)
T ss_dssp -----------------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE------------------------
T ss_pred -----------------CHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE------------------------
Confidence 223467888899999998888876665555555555555
Q ss_pred hcccccccccccccccccCCCCeeecCCCccCC
Q 037042 278 YLWGNHFSGSIPNFIFNASKLSRLELQKNSFSG 310 (1002)
Q Consensus 278 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 310 (1002)
|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 188 -L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 188 -LDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp -CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred -CCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 44555544444456666777777777777653
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-31 Score=319.64 Aligned_cols=470 Identities=15% Similarity=0.127 Sum_probs=261.4
Q ss_pred CCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCC---CCCcc------------cccccCC
Q 037042 39 SFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSG---SIPFS------------IFNIHTL 103 (1002)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~---~~p~~------------~~~l~~L 103 (1002)
-|++|.++... ....++++..... ..+..+..+++|++|+|+++.... ..|.. ...+++|
T Consensus 33 vck~W~~~~~~----~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 33 VCKSWYEIERW----CRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp SCHHHHHHHHH----HCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhhh----hceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 45589999322 3446676654332 222346788999999999976321 22222 2357788
Q ss_pred cEEEecccccccccCcccCCCCCCCCEEeCCCC-ccccc-CCccccCCCCCceEEcccccCCCCCccccc----cccccc
Q 037042 104 KLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN-MFHGG-IPSALSNCTYLRILRLSYNDFAGGIPKEIG----NLTKLE 177 (1002)
Q Consensus 104 ~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~ 177 (1002)
++|+|++|.+++..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+.++. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 888888888877666665445788888888888 55532 455556788888888888887765544443 566888
Q ss_pred eeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCc-ccccccccccccccccceeeccc
Q 037042 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN-KLVGVIPAEIFNMSTIQGVGLQN 256 (1002)
Q Consensus 178 ~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~ 256 (1002)
+|+|++|. ....+. .++..+.++++|++|++++| .+++ +|..+..+++|+.|+++.
T Consensus 188 ~L~l~~~~-~~~~~~---------------------~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 188 SLNISCLA-SEVSFS---------------------ALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGG 244 (594)
T ss_dssp EEECTTCC-SCCCHH---------------------HHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSB
T ss_pred EEEecccC-CcCCHH---------------------HHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccccc
Confidence 88888886 211110 11222344678888888887 4444 666777777777777665
Q ss_pred CCCccccCCccccCCCccchhhcccccccccccccccccCCCCee-ecCCCccCCCCccccccccccchhccccccCccc
Q 037042 257 NSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRL-ELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335 (1002)
Q Consensus 257 N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l 335 (1002)
+.. +++.|.+.+ ++..+.++++|+.| .+.+... +.++..+..+++|++|+|++|.++..
T Consensus 245 ~~~------------------~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~ 304 (594)
T 2p1m_B 245 YTA------------------EVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSY 304 (594)
T ss_dssp CCC------------------CCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHH
T ss_pred ccC------------------ccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHH
Confidence 431 133455553 33356677777777 3433322 23344445566677777776665432
Q ss_pred hhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccC-------
Q 037042 336 TLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGG------- 408 (1002)
Q Consensus 336 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~------- 408 (1002)
.. ...+..+++|+.|++++| +... .++.....+++|++|++.+
T Consensus 305 ~l----~~~~~~~~~L~~L~l~~~-~~~~-------------------------~l~~l~~~~~~L~~L~L~~~~~~g~~ 354 (594)
T 2p1m_B 305 DL----VKLLCQCPKLQRLWVLDY-IEDA-------------------------GLEVLASTCKDLRELRVFPSEPFVME 354 (594)
T ss_dssp HH----HHHHTTCTTCCEEEEEGG-GHHH-------------------------HHHHHHHHCTTCCEEEEECSCTTCSS
T ss_pred HH----HHHHhcCCCcCEEeCcCc-cCHH-------------------------HHHHHHHhCCCCCEEEEecCcccccc
Confidence 11 111345556666666554 2100 0111223356677776632
Q ss_pred --CccCccCCcccc-CCCCCCEEEccCCcccccCCcccc-CCccccEEEccCCcCCccCCccccCCccCccccccccccc
Q 037042 409 --NNLNGSIPITLG-KLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELI 484 (1002)
Q Consensus 409 --N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 484 (1002)
+.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+|+.|...+ -|.++
T Consensus 355 ~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~------------------~~~l~ 416 (594)
T 2p1m_B 355 PNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKA------------------PDYLT 416 (594)
T ss_dssp CSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTC------------------CCTTT
T ss_pred cCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCC------------------ccccc
Confidence 334322222222 255555555555555543333332 24455555555110000 02222
Q ss_pred cc-----CCccccccccCceeeccCCCCCCCCcccccc-cccceeeeCCCCccCccCcccc-cCCccccEEEccCeeecc
Q 037042 485 SV-----IPSTFWNLKDILYLNLSSNSLTGPLPLEIGN-LKVLVKIDFSMNNFSGVIPNAI-GGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 485 ~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 557 (1002)
+. ++..+.++++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ .++++|+.|+|++|.+++
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 11 112244556666666655 444433333433 5667777777777665444444 556777777777777754
Q ss_pred cCCc-ccccccccceeccccccccCCCcccc-cCCCccceeeCCCCcCcc
Q 037042 558 SIPD-SFGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 558 ~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 605 (1002)
..+. ....+++|+.|++++|+++......+ ..+++|+...+..+.-..
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~~ 545 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPD 545 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCGG
T ss_pred HHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCccc
Confidence 4333 33446777777777777753333333 345666666665554433
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-27 Score=279.71 Aligned_cols=237 Identities=21% Similarity=0.197 Sum_probs=149.3
Q ss_pred ccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccc
Q 037042 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373 (1002)
Q Consensus 294 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 373 (1002)
.+++|++|+|++|.|++..|..|+++++|++|+|++|.++.++. +..+++|++|+|++|.|+++.+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-------l~~l~~L~~L~Ls~N~l~~l~~------- 97 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-------LESLSTLRTLDLNNNYVQELLV------- 97 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-------CTTCTTCCEEECCSSEEEEEEE-------
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-------cccCCCCCEEEecCCcCCCCCC-------
Confidence 34478888888888887777778888888888888888776542 6677778888888877765421
Q ss_pred cccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEE
Q 037042 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453 (1002)
Q Consensus 374 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 453 (1002)
.++|+.|++++|+|++..+.. +++|+.|+|++|.+ ++..|..+..+++|+.|+
T Consensus 98 ~~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l------------------------~~~~~~~~~~l~~L~~L~ 150 (487)
T 3oja_A 98 GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKI------------------------TMLRDLDEGCRSRVQYLD 150 (487)
T ss_dssp CTTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCC------------------------CSGGGBCGGGGSSEEEEE
T ss_pred CCCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCC------------------------CCCCchhhcCCCCCCEEE
Confidence 134555555555554433321 23444444444444 444444444445555555
Q ss_pred ccCCcCCccCCcccc-CCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccC
Q 037042 454 LSNNKLSGSIPACFG-DLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFS 532 (1002)
Q Consensus 454 Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 532 (1002)
|++|.+++..|..|. .+++|+.|+|++|.|++..+ +..+++|++|+|++|.+++. |..+..+++|+.|+|++|.|+
T Consensus 151 Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCc
Confidence 555555544444443 45555555555555554422 22466667777777777653 334667777777777777777
Q ss_pred ccCcccccCCccccEEEccCeeec-ccCCcccccccccceeccc
Q 037042 533 GVIPNAIGGIKDLQFLFLEYNILQ-GSIPDSFGDLMSLKSLNLS 575 (1002)
Q Consensus 533 ~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls 575 (1002)
+ +|..+..+++|+.|++++|.+. +.+|..+..++.|+.|+++
T Consensus 228 ~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 228 L-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp E-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred c-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 5 4666777788888888888887 6677778888888888886
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-26 Score=248.48 Aligned_cols=226 Identities=22% Similarity=0.252 Sum_probs=179.4
Q ss_pred ecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCC
Q 037042 381 DMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 381 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
+..+.++. .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|+++
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 33444443 3444332 46777778888777776767777888888888888887766777777888888888888888
Q ss_pred ccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCC-CcccccccccceeeeCCCCccCccCcccc
Q 037042 461 GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP-LPLEIGNLKVLVKIDFSMNNFSGVIPNAI 539 (1002)
Q Consensus 461 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 539 (1002)
+..+..|..+++|++|++++|++.+..+..|.++++|++|++++|++++. +|..+.++++|+.|++++|++++..+..|
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 77777788888888888888888877777788888888888888888764 57888888899999999999888888888
Q ss_pred cCCcccc----EEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC
Q 037042 540 GGIKDLQ----FLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 540 ~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
..+.+|+ .|++++|.+++..+..+.. .+|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..
T Consensus 170 ~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 170 RVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp HHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred hhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 8777777 8999999999766666654 48999999999999777777889999999999999999988754
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-28 Score=292.06 Aligned_cols=185 Identities=18% Similarity=0.074 Sum_probs=130.4
Q ss_pred eeccCcceEEEEE-eCCCcEEEEEEeeccc----------chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHH
Q 037042 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQC----------GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 714 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.+.|++|.+..++ ..-|+.||||++.+.. +...+++.+|+++|+++ .|+||+++++++.++. ..
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~----~~ 317 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ----SG 317 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS----EE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC----EE
Confidence 5667777777664 4468999999997541 23346799999999999 7999999999998877 66
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
||||||++||+|.+++.+.+ .++.. +|+.||+.||+|+| +++||||||||+|||++++|.+||+|||+|+...
T Consensus 318 yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 89999999999999998765 35543 58999999999999 9999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPT 912 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~ 912 (1002)
.... .....+||++|||||++.+ .+..++|+||+|++++++.++..|+
T Consensus 391 ~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 4322 2244579999999999765 5678899999999988877665553
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-29 Score=303.36 Aligned_cols=376 Identities=16% Similarity=0.174 Sum_probs=217.5
Q ss_pred cCCCCCceEEcccccCCCCCccccc-cccccceeeeccc-cccccccchhhHHhhhchhhcccCCcccCCCCccccCccc
Q 037042 147 SNCTYLRILRLSYNDFAGGIPKEIG-NLTKLEELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRN 224 (1002)
Q Consensus 147 ~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~ 224 (1002)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. .++..+.++++
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~------------------------~l~~~~~~~~~ 157 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTD------------------------GLAAIAATCRN 157 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHH------------------------HHHHHHHHCTT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHH------------------------HHHHHHHhCCC
Confidence 4566677777777766655555554 5667777777766 33310 12233345667
Q ss_pred cceeeccCcccccccccccc----cccccceeecccCCCccccCCccccCCCccchhhcccccccc-cccccccccCCCC
Q 037042 225 LEVLALGLNKLVGVIPAEIF----NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG-SIPNFIFNASKLS 299 (1002)
Q Consensus 225 L~~L~L~~N~l~~~~p~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~ 299 (1002)
|++|+|++|.+++..+..+. .+++|+.|++++|. +. ++. .++..+.++++|+
T Consensus 158 L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~--~~---------------------~~~~~l~~l~~~~~~L~ 214 (594)
T 2p1m_B 158 LKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA--SE---------------------VSFSALERLVTRCPNLK 214 (594)
T ss_dssp CCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC--SC---------------------CCHHHHHHHHHHCTTCC
T ss_pred CCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC--Cc---------------------CCHHHHHHHHHhCCCCc
Confidence 77777777766654433332 23344444444443 00 100 0111122345555
Q ss_pred eeecCCC-ccCCCCccccccccccchhccc-------cccCccchhhhhhhcccCCCCCCcEE-eCCCCCCCCccccccc
Q 037042 300 RLELQKN-SFSGFIPSTFGNLRNLKRLGLN-------NNHLTSLTLELSFLSSLSNCKYLEFI-DLSSNSIDGILSRKSV 370 (1002)
Q Consensus 300 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~-------~N~l~~l~~~~~~~~~l~~l~~L~~L-~Ls~N~l~~~~~~~~~ 370 (1002)
+|+|++| .+.+ +|..+.++++|++|+++ .|.+..++. .+.++++|+.| .+......
T Consensus 215 ~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~------~l~~~~~L~~Ls~~~~~~~~-------- 279 (594)
T 2p1m_B 215 SLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV------ALSGCKELRCLSGFWDAVPA-------- 279 (594)
T ss_dssp EEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH------HHHTCTTCCEEECCBTCCGG--------
T ss_pred EEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHH------HHhcCCCcccccCCcccchh--------
Confidence 5555555 3332 44455555555555533 333333332 35566777766 33222111
Q ss_pred ccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccC-CccccCCCCCCEEEccCCccccc-CCccccCCcc
Q 037042 371 GNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI-PITLGKLQKLQVLYFPDNKLEGS-IPDEVCRLAK 448 (1002)
Q Consensus 371 ~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~ 448 (1002)
.+|..+..+++|++|+|++|.+++.. +..+..+++|+.|++++| +... ++.....+++
T Consensus 280 -------------------~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 280 -------------------YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp -------------------GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred -------------------hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 12222334455555555555544321 122345566666666655 3211 1222223556
Q ss_pred ccEEEc---------cCCcCCccCCcccc-CCccCcccccccccccccCCcccc-ccccCceeecc--C----CCCCCCC
Q 037042 449 VYQLDL---------SNNKLSGSIPACFG-DLASLRNLSLASNELISVIPSTFW-NLKDILYLNLS--S----NSLTGPL 511 (1002)
Q Consensus 449 L~~L~L---------s~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~~ 511 (1002)
|+.|+| +.|.+++.....+. .+++|+.|.++.|.+++.....+. .+++|+.|+++ + |.+++..
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 666666 33455433222332 478888888888888776555555 58899999999 4 5666322
Q ss_pred c-----ccccccccceeeeCCCCccCccCcccccC-CccccEEEccCeeecccCCccc-ccccccceeccccccccCCCc
Q 037042 512 P-----LEIGNLKVLVKIDFSMNNFSGVIPNAIGG-IKDLQFLFLEYNILQGSIPDSF-GDLMSLKSLNLSNNNLSGSIP 584 (1002)
Q Consensus 512 ~-----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p 584 (1002)
. ..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 1 2266789999999987 777666666665 8999999999999987666555 668999999999999975444
Q ss_pred c-cccCCCccceeeCCCCcCcc
Q 037042 585 V-SLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 585 ~-~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
. ....+++|+.|++++|+++.
T Consensus 499 ~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 499 LANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHHhCCCCCEEeeeCCCCCH
Confidence 4 34568999999999999853
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=242.00 Aligned_cols=210 Identities=23% Similarity=0.247 Sum_probs=184.0
Q ss_pred cccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEE
Q 037042 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453 (1002)
Q Consensus 374 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 453 (1002)
+++|+.|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+.++++|++|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 34677778888888777777889999999999999999988888899999999999999999988888899999999999
Q ss_pred ccCCcCCccCCccccCCccCccccccccccccc-CCccccccccCceeeccCCCCCCCCcccccccccce----eeeCCC
Q 037042 454 LSNNKLSGSIPACFGDLASLRNLSLASNELISV-IPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLV----KIDFSM 528 (1002)
Q Consensus 454 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~ 528 (1002)
+++|++++..+..|+.+++|++|++++|++.+. +|..|.++++|++|++++|++++..+..+..+++|+ .|++++
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 999999988777899999999999999999875 488999999999999999999988778888887777 899999
Q ss_pred CccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCc
Q 037042 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIP 584 (1002)
Q Consensus 529 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 584 (1002)
|.+++..+..+... +|+.|+|++|++++..+..|..+++|+.|+|++|++++..|
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 187 NPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCCEECTTSSCSC-CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CcccccCccccCCC-cccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 99998777766654 89999999999998777788999999999999999986543
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=237.23 Aligned_cols=205 Identities=25% Similarity=0.281 Sum_probs=139.5
Q ss_pred ccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCccccccc
Q 037042 401 LIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLAS 480 (1002)
Q Consensus 401 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 480 (1002)
.+.+++++|+++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+++...+..|..+++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 444555555555 2333332 3556666666666555555566666666666666666655555566666666666666
Q ss_pred ccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCC
Q 037042 481 NELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP 560 (1002)
Q Consensus 481 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 560 (1002)
|++.++.+..|.++++|++|++++|++++..+..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 66666666666677777777777777776666667777777777777777776666667777788888888888877666
Q ss_pred cccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 561 DSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 561 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..+
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 677778888888888888876666667778888888888888876554
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=241.59 Aligned_cols=188 Identities=26% Similarity=0.299 Sum_probs=115.4
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|++|++++|++++. ..+..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..|+.+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 44555666666666666542 3455666666666666666655555556666666666666666655555566666666
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
+|++++|++++..+..|.++++|++|++++|++++..+..+..+++|+.|++++|++++..|..|..+++|+.|+|++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 66666666666555556666666666666666665555556666666666666666666666666666666666666666
Q ss_pred ecccCCcccccccccceeccccccccCCCcccccCCC
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS 591 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 591 (1002)
+.+. +++|+.|+++.|+++|.+|..+..+.
T Consensus 217 ~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 217 WDCT-------CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp BCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred cccc-------CcHHHHHHHHHHhCCCcccCcccccC
Confidence 6543 23466666666666666666555443
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=241.47 Aligned_cols=168 Identities=25% Similarity=0.276 Sum_probs=117.6
Q ss_pred ccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccC
Q 037042 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473 (1002)
Q Consensus 394 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 473 (1002)
.+..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|
T Consensus 80 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 159 (272)
T 3rfs_A 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNL 159 (272)
T ss_dssp GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccC
Confidence 34455556666666666665555556666666666666666665555556666667777777777666666666777777
Q ss_pred cccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCe
Q 037042 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYN 553 (1002)
Q Consensus 474 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 553 (1002)
+.|++++|++++..+..|.++++|++|++++|++++..+..+..+++|+.|++++|.+.+. +++|+.|+++.|
T Consensus 160 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n 232 (272)
T 3rfs_A 160 TELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWIN 232 (272)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHH
T ss_pred CEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHH
Confidence 7777777777776666677777777777777777776666677778888888888877644 446888888888
Q ss_pred eecccCCcccccccc
Q 037042 554 ILQGSIPDSFGDLMS 568 (1002)
Q Consensus 554 ~l~~~~p~~~~~l~~ 568 (1002)
.++|.+|..++.+..
T Consensus 233 ~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 233 KHSGVVRNSAGSVAP 247 (272)
T ss_dssp HTGGGBBCTTSCBCG
T ss_pred hCCCcccCcccccCC
Confidence 888888888777654
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=235.88 Aligned_cols=205 Identities=22% Similarity=0.213 Sum_probs=159.1
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+.++++++++++++|+++. +|..+. ++++.|+|++|.+++..+..|..+++|+.|+|++|.|++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 5566777777777777773 444443 5677777777777777777777777788888888877754332 6777788
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|+|++|++.. +|..+.++++|++|++++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 88888888774 46677788888888888888887777778888888888888888888777788888888888888888
Q ss_pred ecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCccc
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 606 (1002)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.++|++|+|.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 88766677788888888888888888 6777777788888888888888764
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=230.90 Aligned_cols=191 Identities=24% Similarity=0.279 Sum_probs=166.5
Q ss_pred CCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccC
Q 037042 39 SFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118 (1002)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 118 (1002)
+||.|.|++|... .+.+++++++++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|+|++ ++
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~ 75 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LS 75 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-CC
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCc-cC
Confidence 6889999999743 447899999998 7888776 699999999999999888899999999999999999985 66
Q ss_pred cccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHh
Q 037042 119 TNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIF 198 (1002)
Q Consensus 119 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 198 (1002)
...+..+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++.
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--------- 146 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI--------- 146 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC---------
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc---------
Confidence 66678899999999999999988888899999999999999999977777789999999999999999842
Q ss_pred hhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCcc
Q 037042 199 VKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSG 261 (1002)
Q Consensus 199 ~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 261 (1002)
.|..++.+++|++|+|++|++++..+..+..+++|+.|+|++|++.+
T Consensus 147 ----------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 147 ----------------PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp ----------------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred ----------------CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 23468889999999999999998888788888888888888888764
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-25 Score=264.03 Aligned_cols=186 Identities=16% Similarity=0.126 Sum_probs=143.6
Q ss_pred CCCceeeccCcceEEEEEeCCCcEEEEEEeecccc--------hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 709 SENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG--------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
...++||+|+||+||+|+. .++.+|+|+...... ...+.+.+|++++++++||||+++..++...+ .
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~----~ 413 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD----N 413 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT----T
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC----c
Confidence 4457899999999999954 478899998643211 12355789999999999999995555554444 3
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++.. +..++.|+++||+||| +++|+||||||+|||++. .+||+|||+|+..
T Consensus 414 ~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 414 KRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp TEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred cEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 4799999999999999976 4589999999999999 899999999999999998 9999999999987
Q ss_pred cCCCcee-----eeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCc
Q 037042 861 TREDQFV-----TQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTN 913 (1002)
Q Consensus 861 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~ 913 (1002)
....... ......||+.|||||++.. ..|+...|+||.++-..+-+.++.+|.
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 6532211 1134568999999999876 568889999999999999888887764
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=227.57 Aligned_cols=203 Identities=22% Similarity=0.227 Sum_probs=104.6
Q ss_pred cCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCC
Q 037042 345 LSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQK 424 (1002)
Q Consensus 345 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 424 (1002)
+.++++++++++++|.++.++. .++++++.|+|++|++++..|..|..+++|++|+|++|+|++..+. +.+++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~-----~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~ 78 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPP-----DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPV 78 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCS-----CCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTT
T ss_pred ccccCCccEEECCCCCCCcCCC-----CCCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCc
Confidence 3445555555555555554321 1123455555555555544555556666666666666666543322 45555
Q ss_pred CCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccC
Q 037042 425 LQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSS 504 (1002)
Q Consensus 425 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 504 (1002)
|++|+|++|+++ .+|..+..+++|++|+|++|+|+ ++.+..|.++++|++|+|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~------------------------~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT------------------------SLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCC------------------------CCCSSTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCc------------------------ccCHHHHcCCCCCCEEECCC
Confidence 555555555554 34444444555555555555554 44444444455555555555
Q ss_pred CCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceecccccccc
Q 037042 505 NSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLS 580 (1002)
Q Consensus 505 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 580 (1002)
|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 5555444444455555555555555555444444555555555555555555 34444555555555555555554
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-24 Score=224.03 Aligned_cols=204 Identities=17% Similarity=0.168 Sum_probs=165.8
Q ss_pred ccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccc-cccccCcccCCCCCCCCEEeCCC-CcccccCCcc
Q 037042 68 TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ-LSGEIPTNICSNLPFFESLNLSK-NMFHGGIPSA 145 (1002)
Q Consensus 68 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~ip~~~~~~l~~L~~L~Ls~-N~l~~~~p~~ 145 (1002)
.+|. +.. +|++|+|++|++++..+..|.++++|++|+|++|+ ++ .+|...|.++++|++|+|++ |++++..+..
T Consensus 25 ~ip~-~~~--~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LPP--STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDA 100 (239)
T ss_dssp SCCC-CCT--TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTS
T ss_pred ccCC-CCC--cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHH
Confidence 5666 443 89999999999997777789999999999999997 66 67777778899999999998 9999777788
Q ss_pred ccCCCCCceEEcccccCCCCCccccccccccc---eeeeccc-cccccccchhhHHhhhchhhcccCCcccCCCCccccC
Q 037042 146 LSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE---ELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGN 221 (1002)
Q Consensus 146 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~ 221 (1002)
|.++++|++|+|++|++++ +|. |.++++|+ +|++++| +++++ .+..|.+
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i-------------------------~~~~~~~ 153 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSI-------------------------PVNAFQG 153 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEE-------------------------CTTTTTT
T ss_pred hCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhc-------------------------Ccccccc
Confidence 9999999999999999985 776 88888888 9999999 88742 2345788
Q ss_pred ccccc-eeeccCcccccccccccccccccceeecccCC-CccccCCccccCC-CccchhhcccccccccccccccccCCC
Q 037042 222 LRNLE-VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNS-LSGSLQSIPYVRL-PNLEELYLWGNHFSGSIPNFIFNASKL 298 (1002)
Q Consensus 222 l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L 298 (1002)
+++|+ +|++++|+++. +|...+..++|+.|+|++|+ ++ .++...|..+ ++|++|+|++|++++..+. .+++|
T Consensus 154 l~~L~~~L~l~~n~l~~-i~~~~~~~~~L~~L~L~~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L 228 (239)
T 2xwt_C 154 LCNETLTLKLYNNGFTS-VQGYAFNGTKLDAVYLNKNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHL 228 (239)
T ss_dssp TBSSEEEEECCSCCCCE-ECTTTTTTCEEEEEECTTCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTC
T ss_pred hhcceeEEEcCCCCCcc-cCHhhcCCCCCCEEEcCCCCCcc-cCCHHHhhccccCCcEEECCCCccccCChh---HhccC
Confidence 99999 99999999984 45544444889999999995 87 5555667788 9999999999999854443 57789
Q ss_pred CeeecCCCc
Q 037042 299 SRLELQKNS 307 (1002)
Q Consensus 299 ~~L~L~~N~ 307 (1002)
+.|+++++.
T Consensus 229 ~~L~l~~~~ 237 (239)
T 2xwt_C 229 KELIARNTW 237 (239)
T ss_dssp SEEECTTC-
T ss_pred ceeeccCcc
Confidence 999998763
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-25 Score=250.67 Aligned_cols=266 Identities=18% Similarity=0.182 Sum_probs=183.8
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCC----ccccccc-CCcEEEecccccccccCcccCC---C-CCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIP----FSIFNIH-TLKLLSFGDNQLSGEIPTNICS---N-LPF 127 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~ip~~~~~---~-l~~ 127 (1002)
.++|++|+++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|++.+..+..+.. . .++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35788899999888888888889999999999987666 6777787 8889999988888655544322 1 278
Q ss_pred CCEEeCCCCcccccCCccccC----C-CCCceEEcccccCCCCCcccccc-----ccccceeeeccccccccccchhhHH
Q 037042 128 FESLNLSKNMFHGGIPSALSN----C-TYLRILRLSYNDFAGGIPKEIGN-----LTKLEELYLSFNGLQGAYDHGFLQI 197 (1002)
Q Consensus 128 L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~~~~~~~~ 197 (1002)
|++|+|++|++++..+..++. + ++|++|+|++|++++..+..+.. .++|++|+|++|++++....
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~----- 156 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD----- 156 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH-----
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH-----
Confidence 888888888888766664444 3 78888888888887666554433 25888888888888743211
Q ss_pred hhhchhhcccCCcccCCCCccccCcc-ccceeeccCcccccccccccccccccceeecccCCCccccCCccccCC-Cccc
Q 037042 198 FVKNIFVQFSHNFSKCEIPNEIGNLR-NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRL-PNLE 275 (1002)
Q Consensus 198 ~~~~~~~~~~~n~~~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l-~~L~ 275 (1002)
.++..+..++ +|++|+|++|++++..+..+... +... ++|+
T Consensus 157 ----------------~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~---------------------l~~~~~~L~ 199 (362)
T 3goz_A 157 ----------------ELIQILAAIPANVNSLNLRGNNLASKNCAELAKF---------------------LASIPASVT 199 (362)
T ss_dssp ----------------HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH---------------------HHTSCTTCC
T ss_pred ----------------HHHHHHhcCCccccEeeecCCCCchhhHHHHHHH---------------------HHhCCCCCC
Confidence 2334444454 78888888888877666544432 0112 2455
Q ss_pred hhhccccccccc----ccccccc-cCCCCeeecCCCccCCCCc----cccccccccchhccccccCccchhhh--hhhcc
Q 037042 276 ELYLWGNHFSGS----IPNFIFN-ASKLSRLELQKNSFSGFIP----STFGNLRNLKRLGLNNNHLTSLTLEL--SFLSS 344 (1002)
Q Consensus 276 ~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~l~~~~--~~~~~ 344 (1002)
+|+|++|++++. ++..+.. .++|++|+|++|.|++..+ ..+..+++|++|+|++|.+..+..+. .....
T Consensus 200 ~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~ 279 (362)
T 3goz_A 200 SLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAA 279 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTT
T ss_pred EEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHH
Confidence 555555555432 3444544 3478888888888877654 33566788888888888866554431 22345
Q ss_pred cCCCCCCcEEeCCCCCCCCc
Q 037042 345 LSNCKYLEFIDLSSNSIDGI 364 (1002)
Q Consensus 345 l~~l~~L~~L~Ls~N~l~~~ 364 (1002)
+..+++|+.||+++|.+...
T Consensus 280 ~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 280 FPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp STTCCEEEEECTTSCBCCGG
T ss_pred hccCCceEEEecCCCcCCCc
Confidence 77888999999999998765
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-25 Score=248.51 Aligned_cols=191 Identities=15% Similarity=0.201 Sum_probs=148.3
Q ss_pred CCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCC--CCCCEEEcccCCCCCCCCcccccccCCcEEEecccccc
Q 037042 37 SISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNL--SSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114 (1002)
Q Consensus 37 ~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 114 (1002)
+.-|.+|.++.|+. ..++.+|++++.+. |..+..+ ++++.|++++|.+++..|. +..+++|++|+|++|.++
T Consensus 33 ~~vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~ 106 (336)
T 2ast_B 33 SGVCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIE 106 (336)
T ss_dssp TSSCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEEC
T ss_pred HHHHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcC
Confidence 34456899999874 35789999999887 5667777 8999999999999977665 667899999999999987
Q ss_pred cc-cCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccc-cCCC-CCccccccccccceeeeccc-cccccc
Q 037042 115 GE-IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYN-DFAG-GIPKEIGNLTKLEELYLSFN-GLQGAY 190 (1002)
Q Consensus 115 ~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~~ 190 (1002)
+. +|.. +..+++|++|+|++|.+++..|..++++++|++|+|++| .+++ .+|..+.++++|++|+|++| .+++.
T Consensus 107 ~~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~- 184 (336)
T 2ast_B 107 VSTLHGI-LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK- 184 (336)
T ss_dssp HHHHHHH-HTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH-
T ss_pred HHHHHHH-HhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH-
Confidence 65 5544 467899999999999998888888888999999999999 6775 36777888889999999998 87641
Q ss_pred cchhhHHhhhchhhcccCCcccCCCCccccCcc-ccceeeccCc--ccc-cccccccccccccceeecccCC
Q 037042 191 DHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLR-NLEVLALGLN--KLV-GVIPAEIFNMSTIQGVGLQNNS 258 (1002)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~-~L~~L~L~~N--~l~-~~~p~~~~~l~~L~~L~L~~N~ 258 (1002)
.+|..+..++ +|++|++++| .++ +.+|..+..+++|+.|++++|.
T Consensus 185 -----------------------~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 185 -----------------------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp -----------------------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred -----------------------HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 1445567778 8888888888 444 3455555566666666666665
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-23 Score=231.45 Aligned_cols=245 Identities=18% Similarity=0.147 Sum_probs=175.8
Q ss_pred CcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcc
Q 037042 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTN 120 (1002)
Q Consensus 41 c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~ 120 (1002)
|+|..|.|. +++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|..
T Consensus 9 C~~~~v~C~------------~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQ------------ESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEE------------STTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEec------------CCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 566666664 45666 678776 368999999999999544567999999999999999998889999
Q ss_pred cCCCCCCCCE-EeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeecc-ccccccccchhhHHh
Q 037042 121 ICSNLPFFES-LNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSF-NGLQGAYDHGFLQIF 198 (1002)
Q Consensus 121 ~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~ 198 (1002)
.|.++++|++ +++++|++++..|..|.++++|++|++++|++++..+..+....++..|++++ |+++.+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~-------- 145 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE-------- 145 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC--------
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc--------
Confidence 9999998875 66778999988888999999999999999999877667777888888888865 5565321
Q ss_pred hhchhhcccCCcccCCCCccccCc-cccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchh
Q 037042 199 VKNIFVQFSHNFSKCEIPNEIGNL-RNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277 (1002)
Q Consensus 199 ~~~~~~~~~~n~~~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 277 (1002)
+..+..+ ..|++|+|++|+|+.+ |...+...+|+.|++++|
T Consensus 146 -----------------~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~-------------------- 187 (350)
T 4ay9_X 146 -----------------RNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDN-------------------- 187 (350)
T ss_dssp -----------------TTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTC--------------------
T ss_pred -----------------ccchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccC--------------------
Confidence 2334444 3578888888888753 444444445555555432
Q ss_pred hcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCC
Q 037042 278 YLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357 (1002)
Q Consensus 278 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls 357 (1002)
|.++...+..|.++++|++|+|++|+|+.+.+..|.++++|+.+++ +.++.+| ++.++++|+.++++
T Consensus 188 ----n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~lP-------~l~~l~~L~~l~l~ 254 (350)
T 4ay9_X 188 ----NNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP-------TLEKLVALMEASLT 254 (350)
T ss_dssp ----TTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCCCC-------CTTTCCSCCEEECS
T ss_pred ----CcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcCcCC-------CchhCcChhhCcCC
Confidence 3344333345666777777777777777666666777777766655 3455554 25667777777776
Q ss_pred CC
Q 037042 358 SN 359 (1002)
Q Consensus 358 ~N 359 (1002)
++
T Consensus 255 ~~ 256 (350)
T 4ay9_X 255 YP 256 (350)
T ss_dssp CH
T ss_pred CC
Confidence 54
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-24 Score=249.49 Aligned_cols=215 Identities=22% Similarity=0.296 Sum_probs=167.1
Q ss_pred CCCCCCCCC-----ccccc-EeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEE
Q 037042 33 NWNSSISFC-----NWTGV-TCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLL 106 (1002)
Q Consensus 33 ~w~~~~~~c-----~w~gv-~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 106 (1002)
+|..+.++| .|.|+ .|.. ++++.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 577677778 79999 7875 479999999999996 888774 89999999999999 788 457899999
Q ss_pred EecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccc
Q 037042 107 SFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGL 186 (1002)
Q Consensus 107 ~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 186 (1002)
+|++|+|++ ||. +. . +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|
T Consensus 106 ~Ls~N~l~~-ip~-l~-~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 106 DACDNRLST-LPE-LP-A--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp ECCSSCCSC-CCC-CC-T--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EccCCCCCC-cch-hh-c--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 999999986 887 43 3 88999999999986 666 67889999999999885 665 567888888888888
Q ss_pred cccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCc
Q 037042 187 QGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSI 266 (1002)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 266 (1002)
++ +|. |. ++|++|+|++|+|+ .+|. +.. +|
T Consensus 173 ~~--------------------------lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L----------------- 202 (571)
T 3cvr_A 173 TF--------------------------LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN----------------- 202 (571)
T ss_dssp SC--------------------------CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------------------
T ss_pred CC--------------------------cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----------------
Confidence 74 455 44 78888888888887 3444 332 22
Q ss_pred cccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccc
Q 037042 267 PYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRN 321 (1002)
Q Consensus 267 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 321 (1002)
+...+.|++|+|++|+|+ .+|..++.+++|+.|+|++|.|++.+|..|+.++.
T Consensus 203 -~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 203 -HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp ------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred -hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 112244588888888887 57777888999999999999999888888877654
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=220.79 Aligned_cols=196 Identities=20% Similarity=0.247 Sum_probs=129.8
Q ss_pred CccEEEccCCccCccCCccccCCCCCCEEEccCCc-ccccCCccccCCccccEEEccC-CcCCccCCccccCCccCcccc
Q 037042 400 NLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNK-LEGSIPDEVCRLAKVYQLDLSN-NKLSGSIPACFGDLASLRNLS 477 (1002)
Q Consensus 400 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 477 (1002)
+|++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|+|++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666666655566666666666666665 6655555666666666677766 666666566666667777777
Q ss_pred cccccccccCCccccccccCc---eeeccCC-CCCCCCcccccccccce-eeeCCCCccCccCcccccCCccccEEEccC
Q 037042 478 LASNELISVIPSTFWNLKDIL---YLNLSSN-SLTGPLPLEIGNLKVLV-KIDFSMNNFSGVIPNAIGGIKDLQFLFLEY 552 (1002)
Q Consensus 478 L~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 552 (1002)
+++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++.+.+..|.. .+|+.|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 77777666 333 66666666 7777777 67665556677777777 7777777777544445554 6777777777
Q ss_pred ee-ecccCCcccccc-cccceeccccccccCCCcccccCCCccceeeCCCC
Q 037042 553 NI-LQGSIPDSFGDL-MSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFN 601 (1002)
Q Consensus 553 N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 601 (1002)
|+ +++..+..|..+ ++|+.|+|++|+|++ +|.. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 74 776666677777 777777777777774 3333 4566777777665
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-23 Score=219.45 Aligned_cols=159 Identities=25% Similarity=0.296 Sum_probs=88.8
Q ss_pred cccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCC
Q 037042 448 KVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFS 527 (1002)
Q Consensus 448 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 527 (1002)
+++.|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 34444444444444444444444555555555555554444445555555555555555554444455555555555555
Q ss_pred CCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCccc
Q 037042 528 MNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606 (1002)
Q Consensus 528 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 606 (1002)
+|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 5555555555555566666666666666655555566666666666666666655555566666666666666666654
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-24 Score=233.09 Aligned_cols=202 Identities=20% Similarity=0.238 Sum_probs=113.2
Q ss_pred cccEEecCCCCCCCCCCccc--CCCCCccEEEccCCccCccCC----ccccCCCCCCEEEccCCcccccCCccccCCccc
Q 037042 376 SLKIFDMSDCNVSGSIPEEI--GNLTNLIGFYLGGNNLNGSIP----ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKV 449 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 449 (1002)
+|++|++++|++++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..+..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 46777777777776666666 666667777777776665443 233456666666666666665555566666666
Q ss_pred cEEEccCCcCCcc---C-CccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcc-cccccccceee
Q 037042 450 YQLDLSNNKLSGS---I-PACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL-EIGNLKVLVKI 524 (1002)
Q Consensus 450 ~~L~Ls~N~l~~~---~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L 524 (1002)
++|+|++|++.+. . +..+..+++|++|+|++|+++...+. +. .++.+++|++|
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~----------------------~~~l~~~l~~L~~L 229 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV----------------------CAALAAAGVQPHSL 229 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHH----------------------HHHHHHHTCCCSSE
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHH----------------------HHHHHhcCCCCCEE
Confidence 6666666665431 1 12234455555555555555422111 00 12344445555
Q ss_pred eCCCCccCccCcccccCC---ccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCC
Q 037042 525 DFSMNNFSGVIPNAIGGI---KDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFN 601 (1002)
Q Consensus 525 ~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 601 (1002)
||++|+|++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|
T Consensus 230 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N 304 (310)
T 4glp_A 230 DLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGN 304 (310)
T ss_dssp ECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSST
T ss_pred ECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCC
Confidence 555555554444444444 46666666666666 4454443 5666666666666643 32 455666777777777
Q ss_pred cCc
Q 037042 602 KLE 604 (1002)
Q Consensus 602 ~l~ 604 (1002)
+|+
T Consensus 305 ~l~ 307 (310)
T 4glp_A 305 PFL 307 (310)
T ss_dssp TTS
T ss_pred CCC
Confidence 765
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-24 Score=245.57 Aligned_cols=231 Identities=19% Similarity=0.194 Sum_probs=142.4
Q ss_pred ccEEecCCCCCCCCCC----cccCCCC-CccEEEccCCccCccCCccccCC-----CCCCEEEccCCcccccCCccccC-
Q 037042 377 LKIFDMSDCNVSGSIP----EEIGNLT-NLIGFYLGGNNLNGSIPITLGKL-----QKLQVLYFPDNKLEGSIPDEVCR- 445 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~- 445 (1002)
|+.|+|++|++++..+ ..|..++ +|++|+|++|++++..+..+..+ ++|++|+|++|++++..+..+..
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 4444444444443333 4455555 66666666666665555555553 66777777777766555543332
Q ss_pred ---C-ccccEEEccCCcCCccCCcccc----C-CccCcccccccccccccCCc----cccccc-cCceeeccCCCCCCCC
Q 037042 446 ---L-AKVYQLDLSNNKLSGSIPACFG----D-LASLRNLSLASNELISVIPS----TFWNLK-DILYLNLSSNSLTGPL 511 (1002)
Q Consensus 446 ---l-~~L~~L~Ls~N~l~~~~p~~~~----~-l~~L~~L~L~~N~l~~~~~~----~~~~l~-~L~~L~Ls~N~l~~~~ 511 (1002)
+ ++|++|+|++|+|++..+..+. . .++|++|+|++|++.+..+. .+..++ +|++|+|++|++++..
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 183 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKN 183 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhh
Confidence 3 5677777777777655544432 2 24677777777777643332 333443 7777777777777665
Q ss_pred cccccc----c-ccceeeeCCCCccCcc----CcccccC-CccccEEEccCeeecccCC----cccccccccceeccccc
Q 037042 512 PLEIGN----L-KVLVKIDFSMNNFSGV----IPNAIGG-IKDLQFLFLEYNILQGSIP----DSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 512 ~~~~~~----l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N 577 (1002)
+..+.. + ++|+.|||++|.|++. ++..+.. .++|+.|+|++|.|++..+ ..+..+++|+.|+|++|
T Consensus 184 ~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n 263 (362)
T 3goz_A 184 CAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYD 263 (362)
T ss_dssp HHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHH
T ss_pred HHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccC
Confidence 544443 3 5777788888877753 3444544 3478888888888876544 33456677888888888
Q ss_pred cccCCC-------cccccCCCccceeeCCCCcCcccC
Q 037042 578 NLSGSI-------PVSLEKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 578 ~l~~~~-------p~~~~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
.+.+.. +..+..+++|+.|||++|++.+..
T Consensus 264 ~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 264 IVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp HHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred CccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 855433 335667788888888888887653
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-25 Score=253.84 Aligned_cols=193 Identities=23% Similarity=0.262 Sum_probs=108.9
Q ss_pred cCCCCCceEEcccccCCC----CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCc
Q 037042 147 SNCTYLRILRLSYNDFAG----GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNL 222 (1002)
Q Consensus 147 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l 222 (1002)
.++++|++|+|++|.+++ .+|..+.++++|++|+|++|.+++..... ++..+..+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~---------------------l~~~l~~l 149 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAK---------------------IARALQEL 149 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHH---------------------HHHHHHHH
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHH---------------------HHHHHHHH
Confidence 455555666666665554 24555555556666666666554211110 11122222
Q ss_pred ---------cccceeeccCcccc-cccc---cccccccccceeecccCCCccc----cCCccccCCCccchhhccccccc
Q 037042 223 ---------RNLEVLALGLNKLV-GVIP---AEIFNMSTIQGVGLQNNSLSGS----LQSIPYVRLPNLEELYLWGNHFS 285 (1002)
Q Consensus 223 ---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~~l~~L~~L~Ls~N~l~ 285 (1002)
++|++|+|++|+++ +.+| ..+..+++|+.|+|++|+++.. +....+..+++|++|+|++|.++
T Consensus 150 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 150 AVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp HHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred hhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 55666666666665 2233 3444555666666666655410 11112345566677777777764
Q ss_pred ----ccccccccccCCCCeeecCCCccCCC----Ccccc--ccccccchhccccccCcc-----chhhhhhhcccCCCCC
Q 037042 286 ----GSIPNFIFNASKLSRLELQKNSFSGF----IPSTF--GNLRNLKRLGLNNNHLTS-----LTLELSFLSSLSNCKY 350 (1002)
Q Consensus 286 ----~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~-----l~~~~~~~~~l~~l~~ 350 (1002)
+.+|..+..+++|++|+|++|.|++. ++..+ +.+++|++|+|++|+|+. ++..+ +.++++
T Consensus 230 ~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l-----~~~l~~ 304 (386)
T 2ca6_A 230 HLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI-----DEKMPD 304 (386)
T ss_dssp HHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH-----HHHCTT
T ss_pred cHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH-----HhcCCC
Confidence 45666777777777777777777755 44555 337777777777777776 44322 245677
Q ss_pred CcEEeCCCCCCCCcc
Q 037042 351 LEFIDLSSNSIDGIL 365 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~ 365 (1002)
|++|+|++|.+++..
T Consensus 305 L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 305 LLFLELNGNRFSEED 319 (386)
T ss_dssp CCEEECTTSBSCTTS
T ss_pred ceEEEccCCcCCcch
Confidence 777777777776543
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-23 Score=227.33 Aligned_cols=204 Identities=16% Similarity=0.126 Sum_probs=143.2
Q ss_pred CCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCC----cccCCCCCccEEEccCCccCccCCccccCC
Q 037042 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP----EEIGNLTNLIGFYLGGNNLNGSIPITLGKL 422 (1002)
Q Consensus 347 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 422 (1002)
.+++|++|++++|.+.+..+...+..-..+|++|+|++|++++..+ ..+..+++|++|+|++|++.+..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 3467999999999999877654431335689999999999998766 445689999999999999999999999999
Q ss_pred CCCCEEEccCCccccc--C--CccccCCccccEEEccCCcCCccCCc----cccCCccCcccccccccccccCCcccccc
Q 037042 423 QKLQVLYFPDNKLEGS--I--PDEVCRLAKVYQLDLSNNKLSGSIPA----CFGDLASLRNLSLASNELISVIPSTFWNL 494 (1002)
Q Consensus 423 ~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 494 (1002)
++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .++.+++|++|+|++|++.+..|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 9999999999998752 2 2345689999999999999973 232 24566777777777777777666655554
Q ss_pred ---ccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeec
Q 037042 495 ---KDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ 556 (1002)
Q Consensus 495 ---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (1002)
++|++|+|++|+++ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 46666666666665 2344332 4455555555555432 11 334444444444444443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=208.49 Aligned_cols=198 Identities=24% Similarity=0.261 Sum_probs=127.3
Q ss_pred CCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccc
Q 037042 37 SISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGE 116 (1002)
Q Consensus 37 ~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 116 (1002)
....|+|++|.|+.. +++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|+++ .
T Consensus 3 ~~C~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~ 66 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-S 66 (208)
T ss_dssp TTCEEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-C
T ss_pred CCCEECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-c
Confidence 345589999999753 333 445444 357888888888888666666777777777777777776 5
Q ss_pred cCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhH
Q 037042 117 IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQ 196 (1002)
Q Consensus 117 ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 196 (1002)
+|...|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 67 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~------- 139 (208)
T 2o6s_A 67 LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSV------- 139 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC-------
T ss_pred cChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCcccee-------
Confidence 5666666677777777777777655555566667777777777766655555566666666666666666531
Q ss_pred HhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccch
Q 037042 197 IFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEE 276 (1002)
Q Consensus 197 ~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 276 (1002)
.+..+..+++|++|+|++|.+.+ .+++|++
T Consensus 140 ------------------~~~~~~~l~~L~~L~l~~N~~~~--------------------------------~~~~l~~ 169 (208)
T 2o6s_A 140 ------------------PDGVFDRLTSLQYIWLHDNPWDC--------------------------------TCPGIRY 169 (208)
T ss_dssp ------------------CTTTTTTCTTCCEEECCSCCBCC--------------------------------CTTTTHH
T ss_pred ------------------CHHHhccCCCccEEEecCCCeec--------------------------------CCCCHHH
Confidence 12224445555555555554332 3467888
Q ss_pred hhcccccccccccccccccCCCCeeecCCCccCCC
Q 037042 277 LYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGF 311 (1002)
Q Consensus 277 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 311 (1002)
|+++.|+++|.+|..++.++. ++..+...+.
T Consensus 170 L~~~~n~~~g~ip~~~~~l~~----~~~~C~~~~~ 200 (208)
T 2o6s_A 170 LSEWINKHSGVVRNSAGSVAP----DSAKCSGSGK 200 (208)
T ss_dssp HHHHHHHCTTTBBCTTSSBCT----TCSBBTTTCC
T ss_pred HHHHHHhCCceeeccCccccC----CccccccCCC
Confidence 888888888888887776554 3444444433
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-25 Score=252.99 Aligned_cols=264 Identities=20% Similarity=0.237 Sum_probs=151.0
Q ss_pred CeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccccccccc
Q 037042 299 SRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLK 378 (1002)
Q Consensus 299 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 378 (1002)
+...++...+. .++..+..+++|++|+|++|+|+..... .+...+..+++|++|+|++|.+..+
T Consensus 12 ~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~-~l~~~l~~~~~L~~L~Ls~~~~~~l-------------- 75 (386)
T 2ca6_A 12 KLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAAR-WLSENIASKKDLEIAEFSDIFTGRV-------------- 75 (386)
T ss_dssp EESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHH-HHHHTTTTCTTCCEEECCSCCTTSC--------------
T ss_pred ccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHH-HHHHHHHhCCCccEEeCcccccCcc--------------
Confidence 33333333333 3455666777777777777777654321 1122355666777777766654322
Q ss_pred EEecCCCCCCCCCCc-------ccCCCCCccEEEccCCccCc----cCCccccCCCCCCEEEccCCcccccCCccccCCc
Q 037042 379 IFDMSDCNVSGSIPE-------EIGNLTNLIGFYLGGNNLNG----SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLA 447 (1002)
Q Consensus 379 ~L~L~~N~l~~~~p~-------~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 447 (1002)
++.+|. .+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+...
T Consensus 76 ---------~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~- 145 (386)
T 2ca6_A 76 ---------KDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA- 145 (386)
T ss_dssp ---------GGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH-
T ss_pred ---------ccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH-
Confidence 222232 23556666666666666665 345555666666666666666653322222221
Q ss_pred cccEEEccCCcCCccCCccccCC---------ccCccccccccccc-ccCC---ccccccccCceeeccCCCCCC-----
Q 037042 448 KVYQLDLSNNKLSGSIPACFGDL---------ASLRNLSLASNELI-SVIP---STFWNLKDILYLNLSSNSLTG----- 509 (1002)
Q Consensus 448 ~L~~L~Ls~N~l~~~~p~~~~~l---------~~L~~L~L~~N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~----- 509 (1002)
+..+ ++|++|+|++|++. ...+ ..+..+++|++|++++|+++.
T Consensus 146 -------------------l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~ 206 (386)
T 2ca6_A 146 -------------------LQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEH 206 (386)
T ss_dssp -------------------HHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHH
T ss_pred -------------------HHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHH
Confidence 1111 44555555555554 1222 244455666666666666651
Q ss_pred CCcccccccccceeeeCCCCccC----ccCcccccCCccccEEEccCeeeccc----CCcccc--cccccceeccccccc
Q 037042 510 PLPLEIGNLKVLVKIDFSMNNFS----GVIPNAIGGIKDLQFLFLEYNILQGS----IPDSFG--DLMSLKSLNLSNNNL 579 (1002)
Q Consensus 510 ~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l 579 (1002)
..|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|.|++. +|..+. .+++|+.|+|++|+|
T Consensus 207 l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i 286 (386)
T 2ca6_A 207 LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEI 286 (386)
T ss_dssp HHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCC
T ss_pred HHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcC
Confidence 23335666666777777777764 45666677777777777777777654 455553 367777777777777
Q ss_pred cC----CCcccc-cCCCccceeeCCCCcCcccC
Q 037042 580 SG----SIPVSL-EKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 580 ~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
++ .+|..+ .++++|+.|+|++|++++..
T Consensus 287 ~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 287 ELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp BHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 76 366666 55777888888888777543
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-24 Score=237.54 Aligned_cols=258 Identities=16% Similarity=0.185 Sum_probs=178.5
Q ss_pred CCCEEEcccCCCCCCCCcccccc--cCCcEEEecccccccccCcccCCCCCCCCEEeCCCCccccc-CCccccCCCCCce
Q 037042 78 SLQSLFLHSNQFSGSIPFSIFNI--HTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGG-IPSALSNCTYLRI 154 (1002)
Q Consensus 78 ~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 154 (1002)
.++.|++++|.+. |..+..+ +++++|++++|.+.+..|. + ..+++|++|+|++|.+++. +|..+.++++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~-~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-H-FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-C-CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-h-ccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 4788999998887 5667777 8899999999998876555 3 3588899999999988865 7788888899999
Q ss_pred EEcccccCCCCCccccccccccceeeeccc-cccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCc
Q 037042 155 LRLSYNDFAGGIPKEIGNLTKLEELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233 (1002)
Q Consensus 155 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N 233 (1002)
|+|++|++++..|..|+++++|++|+|++| .+++. .+|..+.++++|++|++++|
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~------------------------~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF------------------------ALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH------------------------HHHHHHHHCTTCCEEECCCC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH------------------------HHHHHHhcCCCCCEEcCCCC
Confidence 999999888778888888888999998888 56531 14455667788888888888
Q ss_pred -ccccc-ccccccccc-ccceeecccCCCccccCCccccCCCccchhhccccccc-ccccccccccCCCCeeecCCCc-c
Q 037042 234 -KLVGV-IPAEIFNMS-TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS-GSIPNFIFNASKLSRLELQKNS-F 308 (1002)
Q Consensus 234 -~l~~~-~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~-l 308 (1002)
++++. ++..+..++ +|++|++++|.+ .++ +.+|..+.++++|++|+|++|. +
T Consensus 179 ~~l~~~~~~~~~~~l~~~L~~L~l~~~~~-----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l 235 (336)
T 2ast_B 179 FDFTEKHVQVAVAHVSETITQLNLSGYRK-----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVML 235 (336)
T ss_dssp TTCCHHHHHHHHHHSCTTCCEEECCSCGG-----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTC
T ss_pred CCcChHHHHHHHHhcccCCCEEEeCCCcc-----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcC
Confidence 77754 455555555 555555555521 222 2345556667778888888777 6
Q ss_pred CCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCC
Q 037042 309 SGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVS 388 (1002)
Q Consensus 309 ~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~ 388 (1002)
++..+..+.++++|++|+|++|. ...+.. +..+..+++|+.|++++| +. ...+..+...++.|++++|+++
T Consensus 236 ~~~~~~~l~~l~~L~~L~l~~~~-~~~~~~---~~~l~~~~~L~~L~l~~~-i~----~~~~~~l~~~l~~L~l~~n~l~ 306 (336)
T 2ast_B 236 KNDCFQEFFQLNYLQHLSLSRCY-DIIPET---LLELGEIPTLKTLQVFGI-VP----DGTLQLLKEALPHLQINCSHFT 306 (336)
T ss_dssp CGGGGGGGGGCTTCCEEECTTCT-TCCGGG---GGGGGGCTTCCEEECTTS-SC----TTCHHHHHHHSTTSEESCCCSC
T ss_pred CHHHHHHHhCCCCCCEeeCCCCC-CCCHHH---HHHHhcCCCCCEEeccCc-cC----HHHHHHHHhhCcceEEecccCc
Confidence 66666777777888888888775 111111 123566788888888877 32 2222333334555556666666
Q ss_pred CCCCcccC
Q 037042 389 GSIPEEIG 396 (1002)
Q Consensus 389 ~~~p~~~~ 396 (1002)
+..|..++
T Consensus 307 ~~~~~~~~ 314 (336)
T 2ast_B 307 TIARPTIG 314 (336)
T ss_dssp CTTCSSCS
T ss_pred cccCCccc
Confidence 65555544
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-22 Score=223.85 Aligned_cols=173 Identities=24% Similarity=0.426 Sum_probs=94.5
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. +.+..+++|+.|+|++|++++. + .+..+++|+
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~ 132 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQ 132 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCC
T ss_pred hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCC
Confidence 3444445555555555543322 45555555555555555432 2345555555555555555542 2 155555555
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|+
T Consensus 133 ~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 133 VLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred EEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 55555555555433 5556666666666666654322 5566666666666666654433 5566666666666666
Q ss_pred ecccCCcccccccccceeccccccccC
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 581 (1002)
+++..| +..+++|+.|+|++|++++
T Consensus 207 l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcccc--ccCCCCCCEEEccCCeeec
Confidence 664332 5666666666666666653
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=222.60 Aligned_cols=195 Identities=24% Similarity=0.344 Sum_probs=173.3
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++. + .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 4567789999999999985 44 68999999999999999996544 99999999999999999864 3 699999999
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|++++|+++++. .+..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|+
T Consensus 111 ~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 9999999998863 39999999999999999997544 8999999999999999997654 9999999999999999
Q ss_pred ecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcc
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 996554 8999999999999999996553 8999999999999999986
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-22 Score=223.70 Aligned_cols=223 Identities=17% Similarity=0.141 Sum_probs=170.3
Q ss_pred ccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCC-ccccCCCCCCE-EEccCCcccccCCccccCCccccEE
Q 037042 375 HSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQV-LYFPDNKLEGSIPDEVCRLAKVYQL 452 (1002)
Q Consensus 375 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 452 (1002)
.++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++++. +.++.|+++...|+.|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 456666666666665555678889999999999998866554 56888888765 6667788888888888889999999
Q ss_pred EccCCcCCccCCccccCCccCccccccc-ccccccCCccccccc-cCceeeccCCCCCCCCcccccccccceeeeCCC-C
Q 037042 453 DLSNNKLSGSIPACFGDLASLRNLSLAS-NELISVIPSTFWNLK-DILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSM-N 529 (1002)
Q Consensus 453 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N 529 (1002)
++++|+|++..+..+....++..|++.+ |++..+.+..|..+. .++.|+|++|+|+.+.+..| ...+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCC
Confidence 9999999877777777777788888865 577777777787765 58889999999986444444 556889999874 6
Q ss_pred ccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCc
Q 037042 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNK 602 (1002)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 602 (1002)
.++.+.+++|.++++|+.|+|++|+|+...+..|.++++|+.+++ ++++ .+| .+.++++|+.++++++.
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCCc
Confidence 777666678899999999999999999666666777776666554 3454 566 47888999999987654
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-23 Score=251.18 Aligned_cols=224 Identities=21% Similarity=0.200 Sum_probs=126.9
Q ss_pred CCCCChhHHHHHHHHHHhccCCCCCccccCCC-CCCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEE
Q 037042 4 NTSNITTDLDALHALKTHITNDPTNFFAKNWN-SSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSL 82 (1002)
Q Consensus 4 ~~~~~~~~~~~l~~~k~~~~~~~~~~~~~~w~-~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L 82 (1002)
+.+....++++|.++..+.....+.. ...|. ..+..+.|.++++.. .+++.|+|.++++.+ +|..+....+|..+
T Consensus 126 s~s~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~ 201 (727)
T 4b8c_D 126 SKSLVDCTKQALMEMADTLTDSKTAK-KQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQY 201 (727)
T ss_dssp ------CCCHHHHHHHHHHHHHHTTC------------------------------------------------------
T ss_pred hhhccccchhhhhhhhhhcccccCcc-cCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcc
Confidence 44567888999999998764433332 23453 344567899998876 579999999999986 45444333333332
Q ss_pred -----EcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEc
Q 037042 83 -----FLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRL 157 (1002)
Q Consensus 83 -----~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 157 (1002)
+++.|.+. ..|..+..+++|++|+|++|.+. .+|..++ .+++|++|+|++|.|+ .+|..|++|++|++|+|
T Consensus 202 ~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 277 (727)
T 4b8c_D 202 SIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDL 277 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEEC
T ss_pred cccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeC
Confidence 23334444 55788889999999999999998 7888887 6899999999999998 88888999999999999
Q ss_pred ccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccc
Q 037042 158 SYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237 (1002)
Q Consensus 158 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1002)
++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|+|++
T Consensus 278 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~--------------------------~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 278 SHNRLT-SLPAELGSCFQLKYFYFFDNMVT--------------------------TLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp TTSCCS-SCCSSGGGGTTCSEEECCSSCCC--------------------------CCCSSTTSCTTCCCEECTTSCCCS
T ss_pred cCCcCC-ccChhhcCCCCCCEEECCCCCCC--------------------------ccChhhhcCCCccEEeCCCCccCC
Confidence 999998 78989999999999999999886 578888999999999999999998
Q ss_pred ccccccccccc-cceeecccCCCccc
Q 037042 238 VIPAEIFNMST-IQGVGLQNNSLSGS 262 (1002)
Q Consensus 238 ~~p~~~~~l~~-L~~L~L~~N~l~~~ 262 (1002)
.+|..+..+.. +..++|++|.+++.
T Consensus 331 ~~p~~~~~~~~~~~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 331 QFLKILTEKSVTGLIFYLRDNRPEIP 356 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred CChHHHhhcchhhhHHhhccCcccCc
Confidence 88888765532 22355666655543
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-22 Score=215.20 Aligned_cols=163 Identities=16% Similarity=0.146 Sum_probs=126.5
Q ss_pred HHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccc------------------hhHHHHHHHHHHHHhccC
Q 037042 700 ELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG------------------RAFKSFDVECEVMKSIRH 761 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h 761 (1002)
.+......|+..+.||+|+||.||+|+..+|+.||||+++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34445566778899999999999999987799999999864321 13456889999999999
Q ss_pred CCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCe
Q 037042 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNV 841 (1002)
Q Consensus 762 ~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NI 841 (1002)
| +++++++..+ ..++||||+++|+|.+ +... ....++.||++|++||| +.+|+||||||+||
T Consensus 163 -~-~~v~~~~~~~-----~~~lvmE~~~g~~L~~-l~~~-------~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NI 224 (282)
T 1zar_A 163 -G-LAVPKVYAWE-----GNAVLMELIDAKELYR-VRVE-------NPDEVLDMILEEVAKFY---HRGIVHGDLSQYNV 224 (282)
T ss_dssp -T-SSSCCEEEEE-----TTEEEEECCCCEEGGG-CCCS-------CHHHHHHHHHHHHHHHH---HTTEECSCCSTTSE
T ss_pred -C-CCcCeEEecc-----ceEEEEEecCCCcHHH-cchh-------hHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHE
Confidence 4 6666655432 3479999999999998 4221 23469999999999999 89999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCC----------CCcCcccchHH
Q 037042 842 LLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE----------GRVSTNGDVYN 897 (1002)
Q Consensus 842 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~DvwS 897 (1002)
|++ ++.+||+|||+|+.. ..|+|||++.. .+|+..+|+|.
T Consensus 225 Ll~-~~~vkl~DFG~a~~~---------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVEV---------------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp EEE-TTEEEECCCTTCEET---------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EEE-CCcEEEEECCCCeEC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999 999999999998632 23789997643 34555566654
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-21 Score=199.16 Aligned_cols=164 Identities=25% Similarity=0.293 Sum_probs=135.0
Q ss_pred CCCCCCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccc
Q 037042 33 NWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ 112 (1002)
Q Consensus 33 ~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 112 (1002)
-|..+.+.|+|++|.|.. +++. .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~------------~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRS------------KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTT------------SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccC------------CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 355677889999999964 3343 6676554 899999999999998889999999999999999999
Q ss_pred cccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccc
Q 037042 113 LSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDH 192 (1002)
Q Consensus 113 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 192 (1002)
|. .+|...|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++.
T Consensus 76 l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~--- 150 (229)
T 3e6j_A 76 LG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSI--- 150 (229)
T ss_dssp CC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCC---
T ss_pred CC-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCcc---
Confidence 96 788888888999999999999998777777888999999999999988 7788888888899999988888742
Q ss_pred hhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccc
Q 037042 193 GFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV 238 (1002)
Q Consensus 193 ~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 238 (1002)
.+..+..+++|+.|+|++|.+...
T Consensus 151 ----------------------~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 151 ----------------------PHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp ----------------------CTTTTTTCTTCCEEECTTSCBCTT
T ss_pred ----------------------CHHHHhCCCCCCEEEeeCCCccCC
Confidence 224567788888888888887753
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-21 Score=196.21 Aligned_cols=161 Identities=24% Similarity=0.249 Sum_probs=81.4
Q ss_pred CCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeecc
Q 037042 424 KLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503 (1002)
Q Consensus 424 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 503 (1002)
+|++|++++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++++.+..|.++++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 33444444444443333333344444444444444443333344444444444444444444444444555555555555
Q ss_pred CCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCC
Q 037042 504 SNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583 (1002)
Q Consensus 504 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 583 (1002)
+|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|.+.+ .+++|+.|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 555554444445555555555555555555555555556666666666665543 2335666666666666666
Q ss_pred cccccCCC
Q 037042 584 PVSLEKLS 591 (1002)
Q Consensus 584 p~~~~~l~ 591 (1002)
|..++.++
T Consensus 182 p~~~~~l~ 189 (208)
T 2o6s_A 182 RNSAGSVA 189 (208)
T ss_dssp BCTTSSBC
T ss_pred eccCcccc
Confidence 66655544
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-21 Score=226.00 Aligned_cols=187 Identities=22% Similarity=0.289 Sum_probs=88.0
Q ss_pred CCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEE
Q 037042 350 YLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLY 429 (1002)
Q Consensus 350 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 429 (1002)
+|+.|+|++|.|++++.. +.++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|++|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~-----l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~ 126 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDN-----LPPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLD 126 (571)
T ss_dssp TCSEEECCSSCCSCCCSC-----CCTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEE
T ss_pred CccEEEeCCCCCCccCHh-----HcCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEE
Confidence 666777777766654221 1134555555555554 333 223444455555554443 333 332 444444
Q ss_pred ccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCC
Q 037042 430 FPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG 509 (1002)
Q Consensus 430 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 509 (1002)
|++|+|++ +|. . +++|+.|+|++|+|+++ |. .+++|++|+|++|+|++
T Consensus 127 Ls~N~l~~-lp~---~------------------------l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 127 VDNNQLTM-LPE---L------------------------PALLEYINADNNQLTML-PE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CCSSCCSC-CCC---C------------------------CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC
T ss_pred CCCCcCCC-CCC---c------------------------CccccEEeCCCCccCcC-CC---cCCCcCEEECCCCCCCC
Confidence 44444443 232 2 34444444444444442 22 23445555555555544
Q ss_pred CCcccccccccceeeeCCCCccCccCcccccCCccc-------cEEEccCeeecccCCcccccccccceeccccccccCC
Q 037042 510 PLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDL-------QFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGS 582 (1002)
Q Consensus 510 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 582 (1002)
+|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.
T Consensus 175 -lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 175 -LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp -CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred -cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 333 33 44555555555554 2233 332 44 55555555555 3455555555555555555555555
Q ss_pred CcccccCC
Q 037042 583 IPVSLEKL 590 (1002)
Q Consensus 583 ~p~~~~~l 590 (1002)
+|..+..+
T Consensus 246 ~p~~l~~l 253 (571)
T 3cvr_A 246 IRESLSQQ 253 (571)
T ss_dssp HHHHHHHH
T ss_pred CHHHHHHh
Confidence 55554443
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.3e-21 Score=199.10 Aligned_cols=156 Identities=26% Similarity=0.294 Sum_probs=105.7
Q ss_pred EEEccCCcCCccCCccccCCccCcccccccccccccCC-ccccccccCceeeccCCCCCCCCcccccccccceeeeCCCC
Q 037042 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP-STFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 451 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
.+++++|.++. +|..+. ..++.|+|++|+|+++.+ ..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555553 333332 234556666666665533 34666666777777777766666666777777777777777
Q ss_pred ccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCC
Q 037042 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 77776667777777777777777777777777777777777777777777777777777777788888888888776553
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-20 Score=210.47 Aligned_cols=176 Identities=24% Similarity=0.208 Sum_probs=97.9
Q ss_pred cEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCcccc-CCccccEEEccCCcCCccCCccccCCccCccccccc
Q 037042 402 IGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLAS 480 (1002)
Q Consensus 402 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 480 (1002)
+.+++++|+++. +|..+. +.++.|+|++|+|++..+..+. .+++|+.|+|++|+|+++.+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 466777777763 444432 2466666666666655555555 666666666666666655555666666666666666
Q ss_pred ccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccc---cCCccccEEEccCeeecc
Q 037042 481 NELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAI---GGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 481 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 557 (1002)
|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 66665555555556666666666665555555555555555555555555554443333 335555555555555554
Q ss_pred cCCcccccccc--cceecccccccc
Q 037042 558 SIPDSFGDLMS--LKSLNLSNNNLS 580 (1002)
Q Consensus 558 ~~p~~~~~l~~--L~~L~Ls~N~l~ 580 (1002)
..+..|..++. |+.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 33344444443 244444444444
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=188.98 Aligned_cols=161 Identities=18% Similarity=0.227 Sum_probs=144.4
Q ss_pred CCCCCCcccccEeeCC---------CCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEE
Q 037042 36 SSISFCNWTGVTCDVH---------SHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLL 106 (1002)
Q Consensus 36 ~~~~~c~w~gv~c~~~---------~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 106 (1002)
++...|.|..|.|... ...++.|+|++|++++..+..+..+++|++|+|++|++++..|..|.++++|++|
T Consensus 6 P~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 85 (220)
T 2v9t_B 6 PAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85 (220)
T ss_dssp CTTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEE
T ss_pred CCCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEE
Confidence 3445589999999652 2368999999999998777799999999999999999998889999999999999
Q ss_pred EecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccc
Q 037042 107 SFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGL 186 (1002)
Q Consensus 107 ~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 186 (1002)
+|++|+|+ .+|..+|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+
T Consensus 86 ~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 86 VLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred ECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 99999999 78999999999999999999999999899999999999999999999988888899999999999999999
Q ss_pred cccccchhhHH
Q 037042 187 QGAYDHGFLQI 197 (1002)
Q Consensus 187 ~~~~~~~~~~~ 197 (1002)
....+..|+..
T Consensus 165 ~c~c~l~~l~~ 175 (220)
T 2v9t_B 165 ICDCHLKWLAD 175 (220)
T ss_dssp ECSGGGHHHHH
T ss_pred CCCCccHHHHH
Confidence 87555444433
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-20 Score=196.14 Aligned_cols=134 Identities=22% Similarity=0.322 Sum_probs=68.9
Q ss_pred cCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEcc
Q 037042 472 SLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLE 551 (1002)
Q Consensus 472 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 551 (1002)
+|+.|+|++|+|+++.+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|+|+++.+..|.++++|+.|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 34444444444444444444444444444444444444444444444555555555555554444445555555555555
Q ss_pred CeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcc
Q 037042 552 YNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 552 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
+|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.+
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 555555555555555555555555555555444555555556666666666554
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-20 Score=199.92 Aligned_cols=150 Identities=27% Similarity=0.428 Sum_probs=76.0
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|+.|+|++|++++. ..+..+++|+
T Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~ 137 (291)
T 1h6t_A 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLE 137 (291)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCC
T ss_pred HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCC
Confidence 4445555555555555554333 5555666666666665553 22 255555555555555555532 2344455555
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|++++|+++++ ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.|++. | .+..+++|+.|++++|+
T Consensus 138 ~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 138 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQE 211 (291)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEE
T ss_pred EEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCc
Confidence 555555555443 344555555555555555554322 44455555555555555432 2 24444455555555554
Q ss_pred ec
Q 037042 555 LQ 556 (1002)
Q Consensus 555 l~ 556 (1002)
++
T Consensus 212 i~ 213 (291)
T 1h6t_A 212 CL 213 (291)
T ss_dssp EE
T ss_pred cc
Confidence 44
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.80 E-value=9.9e-20 Score=217.17 Aligned_cols=130 Identities=26% Similarity=0.396 Sum_probs=66.8
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++. +.+..+++|+.|+|++|+|+
T Consensus 83 l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~-------------- 144 (605)
T 1m9s_A 83 LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKIT-------------- 144 (605)
T ss_dssp GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCC--------------
T ss_pred hccCCCCCEEECcCCCCCCC-h-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccC--------------
Confidence 44555566666666655532 2 455555555555555555431 23444444444554444444
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
++ ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.
T Consensus 145 ----------~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 145 ----------DI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp ----------CC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEE
T ss_pred ----------Cc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCc
Confidence 43 344455555555555555554333 55555555555555555543 235555556666666665
Q ss_pred eccc
Q 037042 555 LQGS 558 (1002)
Q Consensus 555 l~~~ 558 (1002)
+.+.
T Consensus 209 l~~~ 212 (605)
T 1m9s_A 209 CLNK 212 (605)
T ss_dssp EECC
T ss_pred CcCC
Confidence 5543
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=216.29 Aligned_cols=170 Identities=29% Similarity=0.445 Sum_probs=88.6
Q ss_pred CCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCC
Q 037042 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350 (1002)
Q Consensus 271 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~ 350 (1002)
+++|+.|+|++|.+.. +| .+..+++|+.|+|++|+|+++.| |..+++|+.|+|++|+|+.++ .+..+++
T Consensus 42 L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-------~l~~l~~ 110 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS-------SLKDLKK 110 (605)
T ss_dssp HTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT-------TSTTCTT
T ss_pred CCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh-------hhccCCC
Confidence 3444555555555542 22 35556666666666666665443 556666666666666665543 2455555
Q ss_pred CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEc
Q 037042 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 430 (1002)
|+.|+|++|.|.++ ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|
T Consensus 111 L~~L~Ls~N~l~~l----------------------------~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 111 LKSLSLEHNGISDI----------------------------NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp CCEEECTTSCCCCC----------------------------GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCEEEecCCCCCCC----------------------------ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 55555555555432 1234445555555555555433 34455555555555
Q ss_pred cCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc
Q 037042 431 PDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS 485 (1002)
Q Consensus 431 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 485 (1002)
++|+|++..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+.+
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 5555554333 45555555555555555532 234555555555555555544
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.5e-21 Score=227.49 Aligned_cols=203 Identities=20% Similarity=0.197 Sum_probs=148.8
Q ss_pred ccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcc-------------ccc
Q 037042 171 GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK-------------LVG 237 (1002)
Q Consensus 171 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~-------------l~~ 237 (1002)
..+++|+.|+|++|+|+ .+|.++++|++|+.|++++|. +.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~--------------------------~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~ 399 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST--------------------------VLQSELESCKELQELEPENKWCLLTIILLMRALDPLL 399 (567)
T ss_dssp STTTTSSSCCCCHHHHH--------------------------HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGG
T ss_pred ccCccceeccCChhhHH--------------------------hhHHHHHHHHHHHHhccccchhhhhHHHHHHhccccc
Confidence 66889999999999997 589999999999999998876 567
Q ss_pred ccccccccccccceee-cccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCcccc
Q 037042 238 VIPAEIFNMSTIQGVG-LQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTF 316 (1002)
Q Consensus 238 ~~p~~~~~l~~L~~L~-L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 316 (1002)
.+|..+.++++|+.|+ ++.|.+ .+|..+.+++|.++...+ ..|+.|+|++|+|+++ |. |
T Consensus 400 ~~~~~l~~l~~L~~L~~l~~n~~------------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~ 459 (567)
T 1dce_A 400 YEKETLQYFSTLKAVDPMRAAYL------------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-L 459 (567)
T ss_dssp GHHHHHHHHHHHHHHCGGGHHHH------------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-G
T ss_pred CCHHHHHHHHhcccCcchhhccc------------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-c
Confidence 7888899999999998 777755 378889999999885433 2588999999999974 55 8
Q ss_pred ccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccC
Q 037042 317 GNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIG 396 (1002)
Q Consensus 317 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 396 (1002)
+++++|+.|+|++|+|+.+|.. +.++++|+.|+|++|.|+++ | .|+
T Consensus 460 ~~l~~L~~L~Ls~N~l~~lp~~------~~~l~~L~~L~Ls~N~l~~l---------------------------p-~l~ 505 (567)
T 1dce_A 460 EQLLLVTHLDLSHNRLRALPPA------LAALRCLEVLQASDNALENV---------------------------D-GVA 505 (567)
T ss_dssp GGGTTCCEEECCSSCCCCCCGG------GGGCTTCCEEECCSSCCCCC---------------------------G-GGT
T ss_pred cccccCcEeecCcccccccchh------hhcCCCCCEEECCCCCCCCC---------------------------c-ccC
Confidence 8888898888888888877643 55666666666666665532 3 455
Q ss_pred CCCCccEEEccCCccCccC-CccccCCCCCCEEEccCCcccccCCcc---ccCCccccEEE
Q 037042 397 NLTNLIGFYLGGNNLNGSI-PITLGKLQKLQVLYFPDNKLEGSIPDE---VCRLAKVYQLD 453 (1002)
Q Consensus 397 ~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~ 453 (1002)
.+++|+.|+|++|+|++.. |..|+.+++|+.|+|++|.+++.+|.. +..+++|+.|+
T Consensus 506 ~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 506 NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp TCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 6666666666666666655 666666666666666666666543321 12245555554
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-19 Score=186.96 Aligned_cols=134 Identities=23% Similarity=0.305 Sum_probs=83.7
Q ss_pred ccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCC
Q 037042 449 VYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFS 527 (1002)
Q Consensus 449 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 527 (1002)
++.|+|++|+|++..+ ..|..+++|+.|+|++|+|+++.+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3455555555554432 335555566666666666665555566666666666666666666555556666666666666
Q ss_pred CCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCC
Q 037042 528 MNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGS 582 (1002)
Q Consensus 528 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 582 (1002)
+|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 6666666666666666666666666666666666666666666777777766654
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=197.12 Aligned_cols=173 Identities=23% Similarity=0.361 Sum_probs=133.2
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|+.|+|++|++++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 44667788888888888754 3 47888888888888888886544 7888888888888888875 33 378888888
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|++++|++.++ ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|+|++|.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 888888888775 4677788888888888888764 567778888888888888876654 7778888888888888
Q ss_pred ecccCCcccccccccceeccccccccC
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 581 (1002)
|++ +| .+..+++|+.|++++|+++.
T Consensus 190 i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 875 33 37777788888888887774
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-19 Score=203.97 Aligned_cols=177 Identities=23% Similarity=0.251 Sum_probs=132.7
Q ss_pred ccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCcccc-CCCCCCEEEccCCcccccCCccccCCccccEEEcc
Q 037042 377 LKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLG-KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
-+.+++++|+++. +|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 20 ~~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 3567788887774 455443 3577788888888877777776 78888888888888887777777888888888888
Q ss_pred CCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccc---cccccceeeeCCCCccC
Q 037042 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI---GNLKVLVKIDFSMNNFS 532 (1002)
Q Consensus 456 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~ 532 (1002)
+|+|++..+..|..+++|+.|+|++|+|.++.|..|.++++|+.|+|++|+|++..+..| ..+++|+.|||++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 888887777778888888888888888887777778888888888888888876555445 56778888888888888
Q ss_pred ccCcccccCCcc--ccEEEccCeeec
Q 037042 533 GVIPNAIGGIKD--LQFLFLEYNILQ 556 (1002)
Q Consensus 533 ~~~p~~~~~l~~--L~~L~Ls~N~l~ 556 (1002)
++.+..|..++. |+.|+|++|.+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ccCHHHhhhccHhhcceEEecCCCcc
Confidence 766677777776 377888888776
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.3e-19 Score=185.93 Aligned_cols=155 Identities=24% Similarity=0.280 Sum_probs=102.3
Q ss_pred cEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCC
Q 037042 450 YQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 450 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
+.++.+++.++ .+|..+. ++|+.|+|++|+|.++.|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34555555554 2333222 55666666666666665666666666666666666666555555666667777777777
Q ss_pred ccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
+|+++.+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 776666666777777777777777777 566677777777777777777776666667777777777777777776654
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-21 Score=227.96 Aligned_cols=203 Identities=20% Similarity=0.171 Sum_probs=131.3
Q ss_pred cCCCccchhhcccccccccccccccccCCCCeeecCCCc-------------cCCCCccccccccccchhc-cccccCcc
Q 037042 269 VRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNS-------------FSGFIPSTFGNLRNLKRLG-LNNNHLTS 334 (1002)
Q Consensus 269 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 334 (1002)
...++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 34677888888888887 678888888888888887765 5677788888899999988 77776654
Q ss_pred chhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCcc
Q 037042 335 LTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGS 414 (1002)
Q Consensus 335 l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 414 (1002)
++ .+.+++|.|..+.+ ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .
T Consensus 425 L~----------------~l~l~~n~i~~l~~--------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~ 477 (567)
T 1dce_A 425 LR----------------SKFLLENSVLKMEY--------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-A 477 (567)
T ss_dssp HH----------------HHHHHHHHHHHHHH--------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-C
T ss_pred hh----------------hhhhhcccccccCc--------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-c
Confidence 43 23344555443311 135666666666664 344 666666777777776666 5
Q ss_pred CCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccC-CccccCCccCcccccccccccccCCcc---
Q 037042 415 IPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSI-PACFGDLASLRNLSLASNELISVIPST--- 490 (1002)
Q Consensus 415 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~--- 490 (1002)
+|..|+++++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++.. |..|+.+++|+.|+|++|.+++.+|..
T Consensus 478 lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l 555 (567)
T 1dce_A 478 LPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERL 555 (567)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHH
T ss_pred cchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHH
Confidence 56666666666666666666664 44 5666666666666666666554 666666666666666666666544321
Q ss_pred ccccccCceee
Q 037042 491 FWNLKDILYLN 501 (1002)
Q Consensus 491 ~~~l~~L~~L~ 501 (1002)
+..+++|+.|+
T Consensus 556 ~~~lp~L~~L~ 566 (567)
T 1dce_A 556 AEMLPSVSSIL 566 (567)
T ss_dssp HHHCTTCSEEE
T ss_pred HHHCcccCccC
Confidence 22245555554
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.8e-19 Score=178.70 Aligned_cols=152 Identities=20% Similarity=0.272 Sum_probs=90.8
Q ss_pred CCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCc
Q 037042 74 GNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLR 153 (1002)
Q Consensus 74 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 153 (1002)
+.+++|++|+|++|.++ .+| .+..+++|++|++++|.+. .++ .+..+++|++|+|++|++++..|..|+++++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cch--hhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 45566666666666666 455 5666666666666666554 222 234566666666666666665666666666666
Q ss_pred eEEcccccCCCCCccccccccccceeeecccc-ccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccC
Q 037042 154 ILRLSYNDFAGGIPKEIGNLTKLEELYLSFNG-LQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL 232 (1002)
Q Consensus 154 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~ 232 (1002)
+|+|++|++++..|..|+++++|++|+|++|. ++ .+| .+..+++|++|++++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~--------------------------~~~-~l~~l~~L~~L~l~~ 168 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT--------------------------DIM-PLKTLPELKSLNIQF 168 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC--------------------------CCG-GGGGCSSCCEEECTT
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc--------------------------ccH-hhcCCCCCCEEECCC
Confidence 66666666666566666666666666666665 43 233 455666666666666
Q ss_pred cccccccccccccccccceeecccCCC
Q 037042 233 NKLVGVIPAEIFNMSTIQGVGLQNNSL 259 (1002)
Q Consensus 233 N~l~~~~p~~~~~l~~L~~L~L~~N~l 259 (1002)
|++++. + .+..+++|+.|++++|++
T Consensus 169 n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 169 DGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp BCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred CCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 666542 2 444455555555555544
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-19 Score=220.55 Aligned_cols=181 Identities=21% Similarity=0.238 Sum_probs=67.9
Q ss_pred CccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccc
Q 037042 416 PITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLK 495 (1002)
Q Consensus 416 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 495 (1002)
|..|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|+ .+|..|++++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 333444444444444444444 33333334444444444444444 34444444444444444444444 2344455555
Q ss_pred cCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCcc-ccEEEccCeeecccCCcccccccccceecc
Q 037042 496 DILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKD-LQFLFLEYNILQGSIPDSFGDLMSLKSLNL 574 (1002)
Q Consensus 496 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 574 (1002)
+|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|++
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l 366 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEI 366 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEe
Confidence 5555555555554 34444555555555555555555555555443321 123455555555555542 233344
Q ss_pred ccc--------cccCCCcccccCCCccceeeCCCCcCccc
Q 037042 575 SNN--------NLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606 (1002)
Q Consensus 575 s~N--------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 606 (1002)
++| .|.+..+..+..+..+....+++|-+.+.
T Consensus 367 ~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 367 NTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp -----------------------------------CCCGG
T ss_pred ecccccccccCCccccccchhhcccccceeeeeccccccc
Confidence 444 33334444455555666666777766543
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-18 Score=171.57 Aligned_cols=171 Identities=18% Similarity=0.264 Sum_probs=134.6
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCc-ccccccCCcEEEecccccccccCcccCCCCCCCCEEeCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPF-SIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLS 134 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls 134 (1002)
+.++++++++. .+|..+.. +|++|+|++|+|++..|. .|.++++|++|+|++|+|++..|. .|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPN-AFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTT-TTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHh-HcCCcccCCEEECC
Confidence 36778888885 78887765 999999999999976665 489999999999999999965554 45789999999999
Q ss_pred CCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCC
Q 037042 135 KNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214 (1002)
Q Consensus 135 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 214 (1002)
+|+|++..|..|.++++|++|+|++|+|++.+|..|..+++|++|+|++|.+++..+..++..+.... .+..+...|.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~--~~~~~~~~C~ 164 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKK--SLNGGAARCG 164 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHH--CCSGGGCBBC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHc--CCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999876654443333222 2333444555
Q ss_pred CCccccCccccceeeccCccc
Q 037042 215 IPNEIGNLRNLEVLALGLNKL 235 (1002)
Q Consensus 215 ~p~~l~~l~~L~~L~L~~N~l 235 (1002)
.|..+. .....++..+.+
T Consensus 165 ~P~~l~---~~~l~~l~~~~~ 182 (192)
T 1w8a_A 165 APSKVR---DVQIKDLPHSEF 182 (192)
T ss_dssp SSTTTT---TSBGGGSCTTTC
T ss_pred CChHHc---CCChhhCcHhhc
Confidence 555433 334444444444
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-18 Score=186.99 Aligned_cols=166 Identities=19% Similarity=0.278 Sum_probs=92.8
Q ss_pred ccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccC
Q 037042 377 LKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSN 456 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 456 (1002)
+..+++++|.+++.. .+..+++|+.|++++|+++. +| .+..+++|+.|+|++|++++..+ +..+++|+.|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 333444444444322 35556666666666666653 33 45666666666666666664333 56666666666666
Q ss_pred CcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCc
Q 037042 457 NKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP 536 (1002)
Q Consensus 457 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 536 (1002)
|++++. |.. .. ++|+.|+|++|++++. +.+..+++|+.|++++|++++. + .+..+++|+.|+|++|++++.
T Consensus 95 N~l~~l-~~~-~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 95 NRLKNL-NGI-PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp SCCSCC-TTC-CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CccCCc-Ccc-cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 666643 221 11 5566666666666553 2355566666666666666543 2 455556666666666666544
Q ss_pred ccccCCccccEEEccCeeecc
Q 037042 537 NAIGGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 537 ~~~~~l~~L~~L~Ls~N~l~~ 557 (1002)
..+..+++|+.|++++|.+++
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEEC
T ss_pred HHhccCCCCCEEeCCCCcccC
Confidence 445556666666666666654
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-18 Score=184.89 Aligned_cols=169 Identities=21% Similarity=0.273 Sum_probs=100.0
Q ss_pred CCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCC
Q 037042 270 RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCK 349 (1002)
Q Consensus 270 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~ 349 (1002)
.+.++..+++++|.+++.. .+..+++|++|++++|+|+.+ | .+..+++|++|+|++|+|+.++. +..++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~-------l~~l~ 85 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP-------LKDLT 85 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-------GTTCS
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh-------hccCC
Confidence 3456777777777777433 466778888888888888754 3 67788888888888888887653 56777
Q ss_pred CCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEE
Q 037042 350 YLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLY 429 (1002)
Q Consensus 350 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 429 (1002)
+|++|+|++|+++++.... . .+|+.|++++|++++. ..+..+++|+.|+|++|++++. + .+..+++|+.|+
T Consensus 86 ~L~~L~L~~N~l~~l~~~~---~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~ 156 (263)
T 1xeu_A 86 KLEELSVNRNRLKNLNGIP---S--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLD 156 (263)
T ss_dssp SCCEEECCSSCCSCCTTCC---C--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEE
T ss_pred CCCEEECCCCccCCcCccc---c--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEE
Confidence 8888888888777653211 1 3455555555555432 2344555555555555555433 1 344445555555
Q ss_pred ccCCcccccCCccccCCccccEEEccCCcCC
Q 037042 430 FPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 430 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
|++|++++. ..+..+++|+.|++++|.++
T Consensus 157 L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 157 LHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred CCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 555544433 33444444444444444444
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.8e-18 Score=171.98 Aligned_cols=150 Identities=17% Similarity=0.287 Sum_probs=131.4
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
+++.|++++|+++ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..|..+ ..+++|++|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l-~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNL-SGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCC-TTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhh-cCCCCCCEEEe
Confidence 5889999999998 677 7999999999999999775 44589999999999999999998777765 67999999999
Q ss_pred CCCcccccCCccccCCCCCceEEccccc-CCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCccc
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYND-FAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 212 (1002)
++|++++..|..++++++|++|+|++|. ++ .+| .+.++++|++|++++|++++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~------------------------ 173 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD------------------------ 173 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC------------------------
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC------------------------
Confidence 9999998889999999999999999998 65 666 69999999999999999984
Q ss_pred CCCCccccCccccceeeccCccccc
Q 037042 213 CEIPNEIGNLRNLEVLALGLNKLVG 237 (1002)
Q Consensus 213 ~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1002)
++ .+..+++|++|++++|++.+
T Consensus 174 --~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 174 --YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp --CT-TGGGCSSCCEEEECBC----
T ss_pred --hH-HhccCCCCCEEEeeCcccCC
Confidence 34 67889999999999999864
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-18 Score=176.14 Aligned_cols=131 Identities=27% Similarity=0.326 Sum_probs=84.9
Q ss_pred cEEEccCCcCCccCCccccCCccCcccccccccccccCCc-cccccccCceeeccCCCCCCCCcccccccccceeeeCCC
Q 037042 450 YQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSM 528 (1002)
Q Consensus 450 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 528 (1002)
+.+++++|+++ .+|..+.. +|+.|++++|+|.++.+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777776 45544432 667777777777665553 366666666666666666666666666666666666666
Q ss_pred CccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCC
Q 037042 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583 (1002)
Q Consensus 529 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 583 (1002)
|+|++..|..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|++++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 6666666666666666666666666666666666666666666666666666543
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-18 Score=184.69 Aligned_cols=138 Identities=20% Similarity=0.271 Sum_probs=105.7
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcE--EEEEEeecccch------------------------hHHHHHHHHHHHHhc
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGME--VAVKVFNQQCGR------------------------AFKSFDVECEVMKSI 759 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 759 (1002)
-|+..+.||+|+||.||+|+. .+|+. ||||+++..... ....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 366788999999999999987 67989 999987543111 123678899999999
Q ss_pred cCCCc--ceeeeEEecCchhhHHHHHhhccCCC-C----ChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcE
Q 037042 760 RHRNI--IKIISCCSIGDFKALFKALALEYMPH-G----SLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832 (1002)
Q Consensus 760 ~h~ni--v~~~~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ii 832 (1002)
.|+++ +..+++ . ..++||||+.+ | +|.++... .++..+..++.|++.|+.|||. ..+|+
T Consensus 128 ~~~~i~~p~~~~~--~------~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~giv 193 (258)
T 1zth_A 128 KEAGVSVPQPYTY--M------KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELV 193 (258)
T ss_dssp HHTTCCCCCEEEE--E------TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEE
T ss_pred HhCCCCCCeEEEc--C------CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEE
Confidence 88764 344432 1 34699999942 4 66665432 2234567899999999999994 57899
Q ss_pred EccCCCCCeeeCCCCcEEEecccccccc
Q 037042 833 HCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 833 HrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999988 9999999999754
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-18 Score=192.03 Aligned_cols=102 Identities=17% Similarity=0.213 Sum_probs=55.1
Q ss_pred CccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccce-eeeCCCCccCccCcccccCCccccEE
Q 037042 470 LASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLV-KIDFSMNNFSGVIPNAIGGIKDLQFL 548 (1002)
Q Consensus 470 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 548 (1002)
+++|+.|+|++|+++.+.+.+|.++.+|+.|++++| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++.+|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 444555555555555554555555555555555554 4444444555555555 555555 4544555555555555555
Q ss_pred EccCeeecccCCcccccccccceec
Q 037042 549 FLEYNILQGSIPDSFGDLMSLKSLN 573 (1002)
Q Consensus 549 ~Ls~N~l~~~~p~~~~~l~~L~~L~ 573 (1002)
++++|.++.+.+.+|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 5555555555555555555555554
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.2e-18 Score=187.23 Aligned_cols=197 Identities=11% Similarity=0.047 Sum_probs=142.8
Q ss_pred CCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcC----CccCCccccCCccC
Q 037042 398 LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKL----SGSIPACFGDLASL 473 (1002)
Q Consensus 398 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----~~~~p~~~~~l~~L 473 (1002)
+++|+.|+|.+ +++.+.+.+|.++++|+.|++++|.+....+.+|.+..++..+.++.+.. ....+.+|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 88888888888 77777777788888888888888888767777777777777776665322 22233445444444
Q ss_pred c--------------------------ccccccccccccCCccc-cccccCceeeccCCCCCCCCcccccccccceeeeC
Q 037042 474 R--------------------------NLSLASNELISVIPSTF-WNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDF 526 (1002)
Q Consensus 474 ~--------------------------~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 526 (1002)
+ .+.+.++- .......+ ..+++|+.|+|++|+++.+.+..|.++++|+.|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l-~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKL-DNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECC-CHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeee-cHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 4 22222221 11001111 13678899999988888777778888999999999
Q ss_pred CCCccCccCcccccCCcccc-EEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeC
Q 037042 527 SMNNFSGVIPNAIGGIKDLQ-FLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNL 598 (1002)
Q Consensus 527 s~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 598 (1002)
++| ++.+.+.+|.++.+|+ .|++.+ .++.+.+.+|.++++|+.|++++|+++.+.+..|.++++|+.++.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 888 8778888899999998 999988 777677888999999999999888888777778888888888764
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-16 Score=159.50 Aligned_cols=138 Identities=25% Similarity=0.351 Sum_probs=121.6
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.+++++++++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+ .++...|.++++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCC-EeCHhHccCCCCCCEEECCCC
Confidence 5777888887 7787664 69999999999998 88999999999999999999999 577777789999999999999
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhh
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFV 199 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 199 (1002)
+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+....+..++..+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~ 151 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWV 151 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHH
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHH
Confidence 999888889999999999999999999766678999999999999999998765555544443
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.8e-16 Score=157.38 Aligned_cols=136 Identities=23% Similarity=0.301 Sum_probs=116.5
Q ss_pred CCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccC
Q 037042 39 SFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118 (1002)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 118 (1002)
..|+|++|.|+. +++. .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++ .+|
T Consensus 5 C~C~~~~l~~~~------------~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~ 68 (177)
T 2o6r_A 5 CSCSGTEIRCNS------------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLP 68 (177)
T ss_dssp CEEETTEEECCS------------SCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCC
T ss_pred CEeCCCEEEecC------------CCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeC
Confidence 347787777754 4454 4565443 69999999999999777778899999999999999998 677
Q ss_pred cccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccc
Q 037042 119 TNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAY 190 (1002)
Q Consensus 119 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 190 (1002)
...|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..
T Consensus 69 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 69 DGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred hhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 777789999999999999999888888999999999999999999766667899999999999999998754
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-16 Score=158.47 Aligned_cols=133 Identities=21% Similarity=0.158 Sum_probs=92.7
Q ss_pred CCCCCEEEcccCCCC-CCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCce
Q 037042 76 LSSLQSLFLHSNQFS-GSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI 154 (1002)
Q Consensus 76 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 154 (1002)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV---SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC---SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh---hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 467777777777776 67777777777777777777777643 34456777777777777777667777777777777
Q ss_pred EEcccccCCCCC-ccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCc----cccCccccceee
Q 037042 155 LRLSYNDFAGGI-PKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPN----EIGNLRNLEVLA 229 (1002)
Q Consensus 155 L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~----~l~~l~~L~~L~ 229 (1002)
|+|++|++++.. +..+..+++|++|++++|.+++ +|. .+..+++|++|+
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~--------------------------~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTN--------------------------LNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGT--------------------------STTHHHHHHTTCSSCCEET
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcc--------------------------hHHHHHHHHHhCccCcEec
Confidence 777777776432 2567777777777777777763 222 456677777777
Q ss_pred ccCccccc
Q 037042 230 LGLNKLVG 237 (1002)
Q Consensus 230 L~~N~l~~ 237 (1002)
++.|.+..
T Consensus 154 l~~n~~~~ 161 (168)
T 2ell_A 154 GYDREDQE 161 (168)
T ss_dssp TEETTSCB
T ss_pred CCCCChhh
Confidence 77776653
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-16 Score=157.07 Aligned_cols=130 Identities=26% Similarity=0.238 Sum_probs=54.5
Q ss_pred ccEEEccCCcCC-ccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCC
Q 037042 449 VYQLDLSNNKLS-GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFS 527 (1002)
Q Consensus 449 L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 527 (1002)
|+.|+|++|+++ +.+|..+..+++|+.|++++|.+++. ..|..+++|++|++++|++++.+|..+..+++|+.|+|+
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 103 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECB
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEecc
Confidence 334444444433 23333333344444444444443332 333444444444444444443333333334444444444
Q ss_pred CCccCccC-cccccCCccccEEEccCeeecccCC---cccccccccceecccccccc
Q 037042 528 MNNFSGVI-PNAIGGIKDLQFLFLEYNILQGSIP---DSFGDLMSLKSLNLSNNNLS 580 (1002)
Q Consensus 528 ~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 580 (1002)
+|+|++.. +..+..+++|+.|++++|.+++..+ ..|..+++|+.|++++|.+.
T Consensus 104 ~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 104 GNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp SSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred CCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 44444321 1344444444444444444443222 24444445555555555444
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=8.8e-17 Score=163.25 Aligned_cols=111 Identities=32% Similarity=0.409 Sum_probs=73.1
Q ss_pred cCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccc
Q 037042 496 DILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLS 575 (1002)
Q Consensus 496 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 575 (1002)
+|++|++++|+++ .+|..|.++++|+.|+|++|+|+++.+.+|.++++|+.|+|++|+|++..|..|..+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4555666666665 344556666666666666666666666666666666777777777666666667777777777777
Q ss_pred cccccCCCcccccCCCccceeeCCCCcCcccC
Q 037042 576 NNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 576 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
+|+|++..+..|..+++|+.|+|++|+|.+..
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 77776555556667777777777777776543
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.63 E-value=2.4e-15 Score=170.42 Aligned_cols=266 Identities=12% Similarity=0.160 Sum_probs=192.5
Q ss_pred cCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccccc
Q 037042 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLS 374 (1002)
Q Consensus 295 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 374 (1002)
...++.+.+.+ .++.+...+|.+. +|+.+.|..| ++.++.. +|.++ +|+.+++..
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~-----aF~~~-~L~~i~lp~---------------- 166 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDM-----AFFNS-TVQEIVFPS---------------- 166 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTT-----TTTTC-CCCEEECCT----------------
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHH-----hcCCC-CceEEEeCC----------------
Confidence 35666666654 4555666777764 6777777665 6666543 24442 455555543
Q ss_pred ccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEc
Q 037042 375 HSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDL 454 (1002)
Q Consensus 375 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 454 (1002)
.+....+..|.++++|+.+++.+|+++.+....|. ..+|+.+.|.++ ++.....+|.++++|+.+++
T Consensus 167 -----------~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 167 -----------TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp -----------TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred -----------CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 23334456788888888888888888866666676 578888888754 66566677888888888888
Q ss_pred cCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCC-----CCCcccccccccceeeeCCCC
Q 037042 455 SNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT-----GPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 455 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
..| ++.+...+|.+ .+|+.+.+ .|.++.+.+.+|.++++|+.+++.+|.+. .+.+..|.++++|+.++|. |
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~ 309 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-E 309 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-T
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-C
Confidence 865 56566777877 67888888 55677777788888888888888887765 3556778888888888888 4
Q ss_pred ccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC-ccceeeCCCCcCc
Q 037042 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS-YLKDLNLSFNKLE 604 (1002)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 604 (1002)
.++.+...+|.++.+|+.++|..| ++.+.+.+|.++ +|+.|++++|.+....+..|..++ .++.|++..|.+.
T Consensus 310 ~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 310 SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 577777788888888888888665 665677888888 888888888888766667777774 6777777766544
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-15 Score=170.64 Aligned_cols=249 Identities=10% Similarity=0.113 Sum_probs=126.9
Q ss_pred cccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccc
Q 037042 289 PNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRK 368 (1002)
Q Consensus 289 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 368 (1002)
...|.+ .+|+.+.|.+| ++.+...+|.+. +|+.+.|.+ .++.++.. +|.+|++|+.++++.|.++.+....
T Consensus 129 ~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~-----aF~~c~~L~~l~l~~n~l~~I~~~a 199 (401)
T 4fdw_A 129 KDAFRN-SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKED-----IFYYCYNLKKADLSKTKITKLPAST 199 (401)
T ss_dssp TTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSS-----TTTTCTTCCEEECTTSCCSEECTTT
T ss_pred Hhhccc-CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHH-----HhhCcccCCeeecCCCcceEechhh
Confidence 334444 25666665554 555555556553 466666653 45555432 3566666666666666555442221
Q ss_pred ccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCcc
Q 037042 369 SVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAK 448 (1002)
Q Consensus 369 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 448 (1002)
+. ..+|+.+.+.++ +..+....|.++++|+.+.+.+| ++.+...+|.+ .+|+.+.+. |
T Consensus 200 F~---~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~--------------- 257 (401)
T 4fdw_A 200 FV---YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-N--------------- 257 (401)
T ss_dssp TT---TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-T---------------
T ss_pred Ee---ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-C---------------
Confidence 11 023333333321 33233345555555555555543 33344444444 445555552 2
Q ss_pred ccEEEccCCcCCccCCccccCCccCccccccccccc-----ccCCccccccccCceeeccCCCCCCCCccccccccccee
Q 037042 449 VYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELI-----SVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523 (1002)
Q Consensus 449 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 523 (1002)
.++.+.+.+|.++++|+.+++.+|.+. .+.+.+|.++++|+.+++. +.++.+....|.++++|+.
T Consensus 258 ---------~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~ 327 (401)
T 4fdw_A 258 ---------GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQ 327 (401)
T ss_dssp ---------TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCE
T ss_pred ---------CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccE
Confidence 233334444444555555544444433 3444556666666666665 3355444555666666666
Q ss_pred eeCCCCccCccCcccccCCccccEEEccCeeecccCCccccccc-ccceecccccccc
Q 037042 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM-SLKSLNLSNNNLS 580 (1002)
Q Consensus 524 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 580 (1002)
++|..| ++.+.+.+|.++ +|+.|++++|.+....+..|.+++ +++.|++..|.+.
T Consensus 328 l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 328 LTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 666433 555555666666 666666666666655555666653 5566666655543
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.62 E-value=4e-16 Score=151.41 Aligned_cols=108 Identities=23% Similarity=0.242 Sum_probs=56.3
Q ss_pred CCCCEEEcccCCCC-CCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceE
Q 037042 77 SSLQSLFLHSNQFS-GSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRIL 155 (1002)
Q Consensus 77 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 155 (1002)
++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|.+++.+|..++++++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI---ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC---TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc---hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 45666666666665 55665555566666666665555532 223445555555555555554444444445555555
Q ss_pred EcccccCCCC-Cccccccccccceeeecccccc
Q 037042 156 RLSYNDFAGG-IPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 156 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
+|++|++++. .|..+.++++|++|++++|.++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 5555555431 2244444555555555555444
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.62 E-value=7.1e-16 Score=154.46 Aligned_cols=114 Identities=25% Similarity=0.305 Sum_probs=74.3
Q ss_pred ccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceecc
Q 037042 495 KDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNL 574 (1002)
Q Consensus 495 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 574 (1002)
++|+.|++++|++++..+..|..+++|+.|++++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 35556666666666555555566666666666666666555556666667777777777776655566666777777777
Q ss_pred ccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 575 SNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 575 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
++|+|++..+..+..+++|++|+|++|++++.+|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7777765555556667777777777777776655
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.61 E-value=4e-16 Score=151.42 Aligned_cols=126 Identities=21% Similarity=0.227 Sum_probs=52.7
Q ss_pred cccEEEccCCcCC-ccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeC
Q 037042 448 KVYQLDLSNNKLS-GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDF 526 (1002)
Q Consensus 448 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 526 (1002)
+|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+.++++|++|++++|++++.+|..+..+++|+.|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3444444444443 33333334444444444444444333 33344444444444444444333433334444444444
Q ss_pred CCCccCcc-CcccccCCccccEEEccCeeecccCC---cccccccccceeccc
Q 037042 527 SMNNFSGV-IPNAIGGIKDLQFLFLEYNILQGSIP---DSFGDLMSLKSLNLS 575 (1002)
Q Consensus 527 s~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 575 (1002)
++|.+++. .+..++.+++|+.|++++|.+++..+ ..+..+++|+.|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 44444432 12344444444444444444443322 234444444444443
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-15 Score=167.48 Aligned_cols=143 Identities=13% Similarity=0.128 Sum_probs=103.9
Q ss_pred HHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccc--------------h--------hHHHHHHHHHHHHhc
Q 037042 702 CQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG--------------R--------AFKSFDVECEVMKSI 759 (1002)
Q Consensus 702 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~--------~~~~~~~E~~~l~~l 759 (1002)
.....-|++.+.||+|+||.||+|...+|+.||||+++.... . ......+|...+.++
T Consensus 91 ~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL 170 (397)
T 4gyi_A 91 AARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL 170 (397)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 333345899999999999999999988899999998753210 0 011234577777777
Q ss_pred cCCCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 760 RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 760 ~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
.+.++....-+.... .++||||++|++|.++.... ....++.|++.+|.||| ..+||||||||.
T Consensus 171 ~~~gv~vp~p~~~~~------~~LVME~i~G~~L~~l~~~~-------~~~~l~~qll~~l~~lH---~~gIVHrDLKp~ 234 (397)
T 4gyi_A 171 YEEGFPVPEPIAQSR------HTIVMSLVDALPMRQVSSVP-------DPASLYADLIALILRLA---KHGLIHGDFNEF 234 (397)
T ss_dssp HHTTCSCCCEEEEET------TEEEEECCSCEEGGGCCCCS-------CHHHHHHHHHHHHHHHH---HTTEECSCCSTT
T ss_pred HhcCCCCCeeeeccC------ceEEEEecCCccHhhhcccH-------HHHHHHHHHHHHHHHHH---HCCCcCCCCCHH
Confidence 655543222221111 25999999999987664321 23568899999999999 889999999999
Q ss_pred CeeeCCCC----------cEEEecccccccc
Q 037042 840 NVLLGDNM----------VAHLSDFGITKLL 860 (1002)
Q Consensus 840 NILl~~~~----------~~kl~DfGla~~~ 860 (1002)
|||+++++ .+.|+||+-+...
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 99998776 3899999977543
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.4e-15 Score=150.35 Aligned_cols=133 Identities=17% Similarity=0.114 Sum_probs=91.1
Q ss_pred ccCCCCCCCEEEcccCCCCCCCCccccccc-CCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCC
Q 037042 72 RLGNLSSLQSLFLHSNQFSGSIPFSIFNIH-TLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCT 150 (1002)
Q Consensus 72 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 150 (1002)
.+.++.+|++|+|++|+++ .+|. +..+. +|++|+|++|+|++. ..+..+++|++|+|++|+|++..|..|+.++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL---DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE---CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc---cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 4566777888888888887 4454 44444 777888877777743 2346677777777777777755445557777
Q ss_pred CCceEEcccccCCCCCcc--ccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCcc----ccCccc
Q 037042 151 YLRILRLSYNDFAGGIPK--EIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE----IGNLRN 224 (1002)
Q Consensus 151 ~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~----l~~l~~ 224 (1002)
+|++|+|++|+|+ .+|. .+..+++|++|++++|.++. +|.. ++.+++
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~--------------------------~~~~~~~~~~~l~~ 141 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN--------------------------KKHYRLYVIYKVPQ 141 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG--------------------------STTHHHHHHHHCTT
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC--------------------------cHhHHHHHHHHCCc
Confidence 7777777777775 5555 67777777777777777763 3332 566677
Q ss_pred cceeeccCcccc
Q 037042 225 LEVLALGLNKLV 236 (1002)
Q Consensus 225 L~~L~L~~N~l~ 236 (1002)
|++||++.|.+.
T Consensus 142 L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 142 VRVLDFQKVKLK 153 (176)
T ss_dssp CSEETTEECCHH
T ss_pred cceeCCCcCCHH
Confidence 777777777665
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.57 E-value=3e-17 Score=167.81 Aligned_cols=139 Identities=24% Similarity=0.284 Sum_probs=80.4
Q ss_pred cCCCCCCCEEEcccCCCCCCCCc------ccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccc
Q 037042 73 LGNLSSLQSLFLHSNQFSGSIPF------SIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSAL 146 (1002)
Q Consensus 73 l~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 146 (1002)
+.....++.++|+.|.++|.+|. .+..+++|++|+|++|++++ +| .+..+++|++|+|++|.++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchh
Confidence 33444555555555555555554 55556666666666666553 44 2344555666666666665 455556
Q ss_pred cCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccc
Q 037042 147 SNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLE 226 (1002)
Q Consensus 147 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~ 226 (1002)
..+++|++|+|++|++++ +| .+.++++|++|+|++|++++.. .+..+..+++|+
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~------------------------~~~~l~~l~~L~ 143 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWG------------------------EIDKLAALDKLE 143 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHH------------------------HHHHHTTTTTCS
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchh------------------------HHHHHhcCCCCC
Confidence 666667777777776664 44 4666666777777777665311 002455666677
Q ss_pred eeeccCccccccccc
Q 037042 227 VLALGLNKLVGVIPA 241 (1002)
Q Consensus 227 ~L~L~~N~l~~~~p~ 241 (1002)
+|++++|.+++.+|.
T Consensus 144 ~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 144 DLLLAGNPLYNDYKE 158 (198)
T ss_dssp EEEECSCHHHHHHHT
T ss_pred EEEecCCcccccccc
Confidence 777777766655443
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.8e-14 Score=159.80 Aligned_cols=316 Identities=13% Similarity=0.079 Sum_probs=151.2
Q ss_pred ccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCc
Q 037042 138 FHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPN 217 (1002)
Q Consensus 138 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~ 217 (1002)
++..-..+|.++++|+.+.|..+ ++..-..+|.++++|+.++|..+ ++.+. ..
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~-------------------------~~ 111 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIG-------------------------RC 111 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEEC-------------------------TT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEcc-------------------------ch
Confidence 44444567788888888888643 65444566778888888877644 33211 13
Q ss_pred cccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCC
Q 037042 218 EIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASK 297 (1002)
Q Consensus 218 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 297 (1002)
.|.++.+|+.+.+..+ ++.+...+|.++.. ++...... +.......|.++++
T Consensus 112 aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~-------------------------~~~~~~~~--~~~i~~~aF~~c~~ 163 (394)
T 4fs7_A 112 TFSGCYALKSILLPLM-LKSIGVEAFKGCDF-------------------------KEITIPEG--VTVIGDEAFATCES 163 (394)
T ss_dssp TTTTCTTCCCCCCCTT-CCEECTTTTTTCCC-------------------------SEEECCTT--CCEECTTTTTTCTT
T ss_pred hhcccccchhhcccCc-eeeecceeeecccc-------------------------cccccCcc--ccccchhhhcccCC
Confidence 4556666666655433 33232333333221 11111111 11122345666677
Q ss_pred CCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccc
Q 037042 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSL 377 (1002)
Q Consensus 298 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 377 (1002)
|+.+.+.++. ..+...+|.++.+|+.+.+..| ++.++.. .|.++..|+.+.+..+...
T Consensus 164 L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~-----~F~~~~~L~~i~~~~~~~~--------------- 221 (394)
T 4fs7_A 164 LEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDY-----CFAECILLENMEFPNSLYY--------------- 221 (394)
T ss_dssp CCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTT-----TTTTCTTCCBCCCCTTCCE---------------
T ss_pred CcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCch-----hhccccccceeecCCCceE---------------
Confidence 7777776543 3355666777777777777655 5555432 3666666666655443221
Q ss_pred cEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCC
Q 037042 378 KIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNN 457 (1002)
Q Consensus 378 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 457 (1002)
+.+.+...++|+.+.+..+ ++.+....|..+..|+.+.+..+... .....|.....++.+.+..+
T Consensus 222 -------------i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 222 -------------LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp -------------ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred -------------eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCce
Confidence 0111222334444444322 22233344555555555555544332 33334444444444444433
Q ss_pred cCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcc
Q 037042 458 KLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPN 537 (1002)
Q Consensus 458 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 537 (1002)
.+ ....|..+.+|+.+.+..+ +..+...+|.++.+|+.+++.++ ++.+...+|.++.+|+.+++..| ++.+...
T Consensus 287 ~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 360 (394)
T 4fs7_A 287 IV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGAN 360 (394)
T ss_dssp EE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred ee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHH
Confidence 22 1234444444554444332 33333444444444544444322 33333334444444444444333 3333334
Q ss_pred cccCCccccEEEcc
Q 037042 538 AIGGIKDLQFLFLE 551 (1002)
Q Consensus 538 ~~~~l~~L~~L~Ls 551 (1002)
+|.++.+|+.+++.
T Consensus 361 aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 361 AFQGCINLKKVELP 374 (394)
T ss_dssp TBTTCTTCCEEEEE
T ss_pred HhhCCCCCCEEEEC
Confidence 44444444444443
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.7e-14 Score=158.81 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=53.0
Q ss_pred cccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccC
Q 037042 418 TLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDI 497 (1002)
Q Consensus 418 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 497 (1002)
.|..+.+|+.+.+.++ ++..-..+|.++.+|+.++|.++ ++.+...+|.++++|+.+++..| ++.+...+|.++.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 3444555555555433 33233344555555555555433 44444556666666666666554 555555566666666
Q ss_pred ceeeccCCCCCCCCcccccccccceee
Q 037042 498 LYLNLSSNSLTGPLPLEIGNLKVLVKI 524 (1002)
Q Consensus 498 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L 524 (1002)
+.+++..+ ++ .+...|.++++|+.+
T Consensus 369 ~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 369 KKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CEEEECCC-CE-EhhheecCCCCCcEE
Confidence 66666544 22 123455566665543
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.56 E-value=9.1e-17 Score=164.17 Aligned_cols=86 Identities=23% Similarity=0.285 Sum_probs=52.7
Q ss_pred cccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccc
Q 037042 145 ALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRN 224 (1002)
Q Consensus 145 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~ 224 (1002)
.|+++++|++|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+..+++
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~--------------------------~l~~~~~~~~~ 94 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK--------------------------KIENLDAVADT 94 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC--------------------------SCSSHHHHHHH
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc--------------------------cccchhhcCCc
Confidence 66666666666666666664 55 6666666666666666665 34555555666
Q ss_pred cceeeccCcccccccccccccccccceeecccCCCc
Q 037042 225 LEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260 (1002)
Q Consensus 225 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 260 (1002)
|++|+|++|++++ +| .+..+++|+.|++++|+++
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 6666666666665 23 3555555555555555544
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.3e-15 Score=147.86 Aligned_cols=135 Identities=19% Similarity=0.212 Sum_probs=102.0
Q ss_pred cccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCcccccccc
Q 037042 95 FSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT 174 (1002)
Q Consensus 95 ~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 174 (1002)
..+.++.+|++|+|++|+++ .+|. +....++|++|+|++|.|++. ..|+++++|++|+|++|+|++..|..|.+++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 35677888999999999988 5554 434455899999999999864 5788899999999999999855445568888
Q ss_pred ccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCc--cccCccccceeeccCccccccccc----ccccccc
Q 037042 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPN--EIGNLRNLEVLALGLNKLVGVIPA----EIFNMST 248 (1002)
Q Consensus 175 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~ 248 (1002)
+|++|+|++|+++ .+|. .++.+++|++|++++|.++.. |. .+..+++
T Consensus 89 ~L~~L~L~~N~i~--------------------------~~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~ 141 (176)
T 1a9n_A 89 DLTELILTNNSLV--------------------------ELGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQ 141 (176)
T ss_dssp TCCEEECCSCCCC--------------------------CGGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTT
T ss_pred CCCEEECCCCcCC--------------------------cchhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCc
Confidence 9999999999886 3444 677888888889988888743 44 3666666
Q ss_pred cceeecccCCCc
Q 037042 249 IQGVGLQNNSLS 260 (1002)
Q Consensus 249 L~~L~L~~N~l~ 260 (1002)
|+.|++++|.+.
T Consensus 142 L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 142 VRVLDFQKVKLK 153 (176)
T ss_dssp CSEETTEECCHH
T ss_pred cceeCCCcCCHH
Confidence 666666666543
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.9e-14 Score=139.15 Aligned_cols=104 Identities=26% Similarity=0.383 Sum_probs=82.9
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
+.+++++|++. .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|..+|..+++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECCC
Confidence 47899999996 7888775 88999999999999888888888888888888888887 46777777777777777777
Q ss_pred CcccccCCccccCCCCCceEEcccccCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFA 163 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 163 (1002)
|+|++..+..|.++++|++|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 7777555555777777777777777776
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.49 E-value=4.2e-14 Score=140.23 Aligned_cols=109 Identities=21% Similarity=0.214 Sum_probs=82.5
Q ss_pred CceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceecccc
Q 037042 497 ILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSN 576 (1002)
Q Consensus 497 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 576 (1002)
.+.+++++|.++. +|..+. +.|+.|+|++|+|+++.|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4567777777774 454442 6777788888888777777788888888888888888877777777888888888888
Q ss_pred ccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 577 NNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 577 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 88887666677888888888888888877655
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.49 E-value=9.9e-14 Score=137.53 Aligned_cols=103 Identities=24% Similarity=0.341 Sum_probs=75.0
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|...|..+++|++|+|++|
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEECCCC
Confidence 6777888887 5777664 78888888888888777777888888877777777777 566666666677777777777
Q ss_pred cccccCCccccCCCCCceEEcccccCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFA 163 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 163 (1002)
+|++..+..|.++++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 776555555666666666666666665
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=137.76 Aligned_cols=108 Identities=21% Similarity=0.279 Sum_probs=76.0
Q ss_pred ceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccc
Q 037042 498 LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 498 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 577 (1002)
+.+++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 466777777653 454443 66777777777777777777777777777777777777665666677777777777777
Q ss_pred cccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 578 NLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 578 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
+|++..+..|..+++|+.|+|++|+|.+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7776555557777777777777777776544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-12 Score=146.13 Aligned_cols=137 Identities=20% Similarity=0.240 Sum_probs=78.3
Q ss_pred CcccccEeeCCCCcEEEEEeCCC-CCccccCcccCCCCCCCEEEccc-CCCCCCCCcccccccCCcEEEecccccccccC
Q 037042 41 CNWTGVTCDVHSHRVTALNISHL-SLSGTIPSRLGNLSSLQSLFLHS-NQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118 (1002)
Q Consensus 41 c~w~gv~c~~~~~~v~~L~l~~~-~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 118 (1002)
|.|.+|.|. ++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|
T Consensus 8 C~~~~v~~~------------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L--------------- 58 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGEL--------------- 58 (347)
T ss_dssp SSSSCEECC------------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCC---------------
T ss_pred ccCCEEEcC------------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCC---------------
Confidence 777777664 33 566 4677 77777777777775 77775444555555554
Q ss_pred cccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHh
Q 037042 119 TNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIF 198 (1002)
Q Consensus 119 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 198 (1002)
++|+|++|+|++..|..|++|++|++|+|++|+|++..+..|..++ |++|+|++|.+....+..++..+
T Consensus 59 ----------~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~ 127 (347)
T 2ifg_A 59 ----------RNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRW 127 (347)
T ss_dssp ----------SEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHH
T ss_pred ----------CEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHH
Confidence 5555555555555555556666666666666666644444444444 66666666666654444444444
Q ss_pred hhchhhcccCCcccCCCCc
Q 037042 199 VKNIFVQFSHNFSKCEIPN 217 (1002)
Q Consensus 199 ~~~~~~~~~~n~~~~~~p~ 217 (1002)
.+.....+..+...|.-|.
T Consensus 128 ~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 128 EEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp HHTTCSSCGGGCCCCSSSS
T ss_pred HHhCcccccccCCCCCCCh
Confidence 4333333333444555555
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.1e-14 Score=161.05 Aligned_cols=111 Identities=21% Similarity=0.176 Sum_probs=49.9
Q ss_pred CCCCEEEcccCCCCCCCCcccccc-----cCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccc-----
Q 037042 77 SSLQSLFLHSNQFSGSIPFSIFNI-----HTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSAL----- 146 (1002)
Q Consensus 77 ~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~----- 146 (1002)
++|++|+|++|.++......+..+ ++|++|+|++|.++..-...++..+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 345555555555553322222221 4555555555555433222232334445555555555543222222
Q ss_pred cCCCCCceEEcccccCCC----CCccccccccccceeeecccccc
Q 037042 147 SNCTYLRILRLSYNDFAG----GIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 147 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
...++|++|+|++|.|+. .++..+..+++|++|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 123455555555555542 12233344455555555555554
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.30 E-value=5.2e-11 Score=135.37 Aligned_cols=329 Identities=12% Similarity=0.151 Sum_probs=161.1
Q ss_pred ccCcc-ccceeeccCcccccccccccccccccceeecccCCCc--cccCCccccCCCccchhhccccccccccccccccc
Q 037042 219 IGNLR-NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS--GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295 (1002)
Q Consensus 219 l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 295 (1002)
|.+++ .|+.+.+-.+ ++.+-..+|.++++|+.+.+.+|.-+ ..+...+|....+|+.+.+..+ ++......|.++
T Consensus 59 F~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c 136 (394)
T 4gt6_A 59 FCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHC 136 (394)
T ss_dssp TTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTC
T ss_pred ccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhh
Confidence 44443 4666666543 55555566667777777776665321 1344455555555555555433 332333444455
Q ss_pred CCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccc
Q 037042 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375 (1002)
Q Consensus 296 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 375 (1002)
.+|+.+.+..+ +..+...+|.++.+|+.+.+..+ ++.+... +|.+ ..|+.+
T Consensus 137 ~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~-----aF~~-~~l~~i--------------------- 187 (394)
T 4gt6_A 137 EELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEER-----AFTG-TALTQI--------------------- 187 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTT-----TTTT-CCCSEE---------------------
T ss_pred cccccccccce-eeeecccceecccccccccccce-eeEeccc-----cccc-cceeEE---------------------
Confidence 55555555432 22234444555555554444332 3333221 1211 223333
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEcc
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
.+..+- .......|.++.+++......+......-..+........... .+.....+..+.+.
T Consensus 188 -----~ip~~~-~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ip 250 (394)
T 4gt6_A 188 -----HIPAKV-TRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALI-----------RYPSQREDPAFKIP 250 (394)
T ss_dssp -----EECTTC-CEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEE-----------ECCTTCCCSEEECC
T ss_pred -----EECCcc-cccccchhhhccccceecccccccccccceeeccccccccccc-----------ccccccccceEEcC
Confidence 332211 1122344555556665555544433111111111000000000 01111223333332
Q ss_pred CCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccC
Q 037042 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVI 535 (1002)
Q Consensus 456 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 535 (1002)
+.++.+...+|.++..|+.+.+..+. ..+...+|.++.+|+.+.+. +.++.+....|.++.+|+.+++..+ ++.+.
T Consensus 251 -~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 326 (394)
T 4gt6_A 251 -NGVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQIL 326 (394)
T ss_dssp -TTEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEEC
T ss_pred -CcceEcccceeeecccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEeh
Confidence 22333445566677777777665443 34555667777777777775 3455455566777777777777654 55566
Q ss_pred cccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcC
Q 037042 536 PNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603 (1002)
Q Consensus 536 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 603 (1002)
..+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|.... ..+.....|+.+.+..|.+
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 677777777777777654 554556777777778887777776542 3556667777777766554
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.8e-11 Score=135.66 Aligned_cols=111 Identities=13% Similarity=0.221 Sum_probs=48.0
Q ss_pred CCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCcccccc
Q 037042 415 IPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNL 494 (1002)
Q Consensus 415 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 494 (1002)
-..+|.++.+|+.+.+.++..+ .....|.++.+|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+...+|.++
T Consensus 257 ~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 257 ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred ccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 3444555555555555443322 333344444455555443 2233333444555555555544432 333334444444
Q ss_pred ccCceeeccCCCCCCCCcccccccccceeeeCCCC
Q 037042 495 KDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 495 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
.+|+.+.+..+ ++.+...+|.++++|+.+++.+|
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 44444444322 33233333444444444444433
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.9e-14 Score=158.90 Aligned_cols=87 Identities=23% Similarity=0.241 Sum_probs=40.5
Q ss_pred ccCceeeccCCCCCCC----CcccccccccceeeeCCCCccCcc----CcccccCCccccEEEccCeeeccc----CCcc
Q 037042 495 KDILYLNLSSNSLTGP----LPLEIGNLKVLVKIDFSMNNFSGV----IPNAIGGIKDLQFLFLEYNILQGS----IPDS 562 (1002)
Q Consensus 495 ~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 562 (1002)
++|+.|+|++|.|+.. ++..+..+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|++. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 3455555555554321 122223444555555555555432 233444455555556665555532 2222
Q ss_pred cccccccceeccccccccC
Q 037042 563 FGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 563 ~~~l~~L~~L~Ls~N~l~~ 581 (1002)
+...++|++|+|++|.|+.
T Consensus 235 L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHCSSCCEEECTTSSCCH
T ss_pred HHhCCCCCEEeccCCCCCH
Confidence 3334555555555555553
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.25 E-value=7.4e-12 Score=139.86 Aligned_cols=103 Identities=25% Similarity=0.248 Sum_probs=51.7
Q ss_pred eeccCC-CCCCCCcccccccccceeeeCCC-CccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccc
Q 037042 500 LNLSSN-SLTGPLPLEIGNLKVLVKIDFSM-NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 500 L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 577 (1002)
++++++ +|++ +|. +..+++|+.|+|++ |+|+++.+..|+++++|+.|+|++|+|++.+|..|..|++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 4443 333 55555555555553 5555554455555555555555555555555555555555555555555
Q ss_pred cccCCCcccccCCCccceeeCCCCcCcc
Q 037042 578 NLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 578 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
+|++..+..|..++ |+.|+|++|+|.+
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 55543333343333 5555555555554
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=3.9e-11 Score=128.24 Aligned_cols=146 Identities=13% Similarity=0.051 Sum_probs=111.7
Q ss_pred HHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHH
Q 037042 702 CQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 702 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 780 (1002)
....+.|+....+|.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+ .
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~----~ 84 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG----W 84 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT----E
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC----c
Confidence 345567888888888999999999755 6899999987532222346889999999984 677888998887654 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC---------------------------------
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY--------------------------------- 827 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------- 827 (1002)
.++||||++|.++.+.... ......++.+++++++.||...
T Consensus 85 ~~lv~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEEEEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred eEEEEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 4699999999999876421 1123468899999999999610
Q ss_pred -----------------------CCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 828 -----------------------STPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 828 -----------------------~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876667799998764
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.1e-09 Score=121.41 Aligned_cols=300 Identities=10% Similarity=0.093 Sum_probs=134.1
Q ss_pred cccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCC
Q 037042 218 EIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASK 297 (1002)
Q Consensus 218 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 297 (1002)
++....+|+.+.+.. .++.+-..+|.++++|+.+.|.++ ++ .+...+|... +|+.+.+..+ ++ .++...+...+
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~~ 114 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGTD 114 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcCC-CCceEECCce-ee-EeccceeccCC
Confidence 344556666666653 355555667777777777777654 43 4555666554 4555555433 33 23333333346
Q ss_pred CCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccc
Q 037042 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSL 377 (1002)
Q Consensus 298 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 377 (1002)
|+.+.+..+ +..+...+|.+. +|+.+.+-. .++.+.. ..|.++.+++.+.+..+............
T Consensus 115 L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~-~v~~i~~-----~~f~~~~~l~~~~~~~~~~~~~~~~~~~~------ 180 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPK-SVTTIKD-----GIGYKAENLEKIEVSSNNKNYVAENYVLY------ 180 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTC-CCCEEEECT-TCCEECS-----CTTTTCTTCCEEEECTTCSSEEEETTEEE------
T ss_pred cccccCCCc-cccccccccccc-eeeeeeccc-eeecccc-----chhcccccccccccccccceeecccceec------
Confidence 777777654 333444555543 344444332 2333332 23566666666666554432211100000
Q ss_pred cEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCC
Q 037042 378 KIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNN 457 (1002)
Q Consensus 378 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 457 (1002)
+ ........+.....+..+.+..+.- ......+....+|+.+.+..+ +.......+.+...|+.+.+..+
T Consensus 181 -------~-~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~ 250 (379)
T 4h09_A 181 -------N-KNKTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN 250 (379)
T ss_dssp -------E-TTSSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT
T ss_pred -------c-cccceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC
Confidence 0 0001122233333444444333221 233344444555555555433 22233334444444555444433
Q ss_pred cCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcc
Q 037042 458 KLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPN 537 (1002)
Q Consensus 458 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 537 (1002)
++.+...+|.++.+|+.+.+..+ +..+...+|.++.+|+.+.+.++.++.+....|.++.+|+.++|..+ ++.+...
T Consensus 251 -v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 327 (379)
T 4h09_A 251 -VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVY 327 (379)
T ss_dssp -CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred -ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHH
Confidence 33333344444444444444322 33333334444444444444444444333334444444444444322 3333333
Q ss_pred cccCCccccEEEc
Q 037042 538 AIGGIKDLQFLFL 550 (1002)
Q Consensus 538 ~~~~l~~L~~L~L 550 (1002)
+|.++.+|+.+.+
T Consensus 328 aF~~C~~L~~i~i 340 (379)
T 4h09_A 328 AFKNCKALSTISY 340 (379)
T ss_dssp TTTTCTTCCCCCC
T ss_pred HhhCCCCCCEEEE
Confidence 4444444444444
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=99.02 E-value=2.8e-12 Score=134.93 Aligned_cols=144 Identities=22% Similarity=0.249 Sum_probs=102.4
Q ss_pred CCcccccEeeCCCCcEEEEEeCC---CCCccccC-cccCCCCCCCEEEcccCCCCCCCCcc-cccccCCcE--EEecccc
Q 037042 40 FCNWTGVTCDVHSHRVTALNISH---LSLSGTIP-SRLGNLSSLQSLFLHSNQFSGSIPFS-IFNIHTLKL--LSFGDNQ 112 (1002)
Q Consensus 40 ~c~w~gv~c~~~~~~v~~L~l~~---~~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~--L~L~~N~ 112 (1002)
.|.|.|+.|+....+|+.+...+ ..+.|.++ +.+..|+. .|..++|.-++.++-+ |...+.|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48999999998777887776654 23444443 23333333 3444555555554433 666777776 7888885
Q ss_pred cccccCcc---cCCCCCCCCEEeCCCCcccc--cCCccccCCCCCceEEcccccCCCCCcccccccc--ccceeeecccc
Q 037042 113 LSGEIPTN---ICSNLPFFESLNLSKNMFHG--GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT--KLEELYLSFNG 185 (1002)
Q Consensus 113 l~~~ip~~---~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~ 185 (1002)
.. .++.. +..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.
T Consensus 155 ~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 155 RS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp HH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 43 33321 23568999999999999997 5677888999999999999999865 3455555 99999999999
Q ss_pred ccc
Q 037042 186 LQG 188 (1002)
Q Consensus 186 l~~ 188 (1002)
+.+
T Consensus 232 l~~ 234 (267)
T 3rw6_A 232 LCD 234 (267)
T ss_dssp TGG
T ss_pred Ccc
Confidence 986
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.9e-08 Score=113.59 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=36.5
Q ss_pred ccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccC
Q 037042 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473 (1002)
Q Consensus 394 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 473 (1002)
.|.++.+|+.+.+..+ +..+....|.++++|+.+.+.++.++.....+|.++.+|+.++|..+ ++.+...+|.++++|
T Consensus 258 aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 335 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKAL 335 (379)
T ss_dssp TTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCC
Confidence 3444444444444322 33333344444444554444444444333344444444444444332 333333444444444
Q ss_pred cccccc
Q 037042 474 RNLSLA 479 (1002)
Q Consensus 474 ~~L~L~ 479 (1002)
+.+.+.
T Consensus 336 ~~i~ip 341 (379)
T 4h09_A 336 STISYP 341 (379)
T ss_dssp CCCCCC
T ss_pred CEEEEC
Confidence 444443
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.96 E-value=2.8e-10 Score=121.30 Aligned_cols=137 Identities=15% Similarity=0.069 Sum_probs=99.1
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCC--cceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN--IIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~l 783 (1002)
..|......+.|..+.||++...+|+.+++|+.... ....+..|+++++.+.+.+ +.+++++...++ ..++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~----~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG----RDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS----CEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC----CCEE
Confidence 345443333456679999998777888999997643 2345788999999986544 556888776554 3469
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC------------------------------------
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY------------------------------------ 827 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 827 (1002)
||||++|.++. ... .+ ...++.+++++++.||...
T Consensus 93 v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp EEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 99999999884 211 11 2357788888899888421
Q ss_pred -------------------CCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 828 -------------------STPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 828 -------------------~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877667799999874
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.84 E-value=9.2e-10 Score=122.18 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=54.3
Q ss_pred CCcEEEEEeCCCCCcc-c-------cCcccCCCCCCCEEEcccCCCC---------CCCCcccccccCCcEEEecccccc
Q 037042 52 SHRVTALNISHLSLSG-T-------IPSRLGNLSSLQSLFLHSNQFS---------GSIPFSIFNIHTLKLLSFGDNQLS 114 (1002)
Q Consensus 52 ~~~v~~L~l~~~~l~~-~-------~p~~l~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~ 114 (1002)
..+|+.|.+....+.| . +.+++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3478899888776653 2 2445667889999988765432 123333444556666666555211
Q ss_pred cccCcccCCCCCCCCEEeCCCCcccccCCcccc--CCCCCceEEcc
Q 037042 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALS--NCTYLRILRLS 158 (1002)
Q Consensus 115 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls 158 (1002)
.+|. + .+++|++|+|..+.++......+. .+++|++|+|+
T Consensus 186 -~l~~-~--~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 186 -SIGK-K--PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp -BCCS-C--BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred -eecc-c--cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 1222 1 145555555555554432222222 44555555553
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.80 E-value=7.8e-10 Score=122.78 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=50.4
Q ss_pred ccccceeeeCCCCccCccCccccc---CCccccEEEccCeeeccc----CCcccccccccceeccccccccCCCcccccC
Q 037042 517 NLKVLVKIDFSMNNFSGVIPNAIG---GIKDLQFLFLEYNILQGS----IPDSFGDLMSLKSLNLSNNNLSGSIPVSLEK 589 (1002)
Q Consensus 517 ~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 589 (1002)
.+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|.+. ++..+..+++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356777777777776543332332 467778888887777753 3334455677888888888776433222322
Q ss_pred -CCccceeeCCCCc
Q 037042 590 -LSYLKDLNLSFNK 602 (1002)
Q Consensus 590 -l~~L~~L~Ls~N~ 602 (1002)
+ ...+++++|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 2457777776
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.75 E-value=6.5e-09 Score=116.36 Aligned_cols=145 Identities=12% Similarity=0.111 Sum_probs=105.9
Q ss_pred CCceeeccCcceEEEEEeCCCcEEEEEEee--ccc-chhHHHHHHHHHHHHhcc--CCCcceeeeEEecCchhhHHHHHh
Q 037042 710 ENNLIGRGGFGSVYKARIQDGMEVAVKVFN--QQC-GRAFKSFDVECEVMKSIR--HRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
..+.++.|.++.||+.+..+ ..+++|+.. ... ......+.+|+++++.+. +..+++++.++..... ....++|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~-~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV-IGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT-TSSCEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc-cCCeEEE
Confidence 35678999999999998764 678888765 322 122456888999999996 4568888888765531 1134689
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC-------------------------------------
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY------------------------------------- 827 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------- 827 (1002)
|||++|..+.+... ..++..++..++.+++++|+.||...
T Consensus 120 me~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 120 MEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99999988854221 13677788899999999999999521
Q ss_pred ------------------CCCcEEccCCCCCeeeCCCCc--EEEeccccccc
Q 037042 828 ------------------STPVIHCDLKPSNVLLGDNMV--AHLSDFGITKL 859 (1002)
Q Consensus 828 ------------------~~~iiHrDlkp~NILl~~~~~--~kl~DfGla~~ 859 (1002)
...++|+|+++.||+++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999987653 69999998864
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.71 E-value=2.9e-09 Score=116.23 Aligned_cols=192 Identities=15% Similarity=0.140 Sum_probs=123.5
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCC--cceeeeEEecCchhhHHHHHhhcc
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRN--IIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
.+.++.|....||++. ..+++|+.... .....+.+|.++++.+. +.. +.+.+.+....+ .....++|||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~-~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE-TYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS-SCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC-CCCcceEEEcc
Confidence 4568999999999873 56899986432 34567889999999884 333 445554433222 11123678999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC----------------------------------------
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY---------------------------------------- 827 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------- 827 (1002)
++|.++.+.... .++..++..++.++++.++.||...
T Consensus 98 i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 98 IKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred cCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 999988754332 2567777888889999988888411
Q ss_pred ---------------CCCcEEccCCCCCeeeCC--CCcEEEecccccccccCCCceeeeccC---CC---------Cccc
Q 037042 828 ---------------STPVIHCDLKPSNVLLGD--NMVAHLSDFGITKLLTREDQFVTQTQT---PA---------TIGY 878 (1002)
Q Consensus 828 ---------------~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~~~---~g---------t~~y 878 (1002)
...++|+|++|.||++++ ...+.|+||+.+..-.+.......... .+ ..++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 135899999999999987 566889999988653322111000000 00 0001
Q ss_pred cc-ccccCCCCcCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 879 MA-LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 879 ~a-PE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
.. |+... ......+.|++|.++|.+.+|..+|..
T Consensus 255 ~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 255 KDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp SCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 11 11110 112236899999999999999887643
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.50 E-value=4.7e-09 Score=105.13 Aligned_cols=122 Identities=17% Similarity=0.150 Sum_probs=87.6
Q ss_pred cccCcccCCCCCCCEEEcccC-CCCCC----CCcccccccCCcEEEecccccccccCcc---cCCCCCCCCEEeCCCCcc
Q 037042 67 GTIPSRLGNLSSLQSLFLHSN-QFSGS----IPFSIFNIHTLKLLSFGDNQLSGEIPTN---ICSNLPFFESLNLSKNMF 138 (1002)
Q Consensus 67 ~~~p~~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~~---~~~~l~~L~~L~Ls~N~l 138 (1002)
..+...+...++|++|+|++| .+... +...+...++|++|+|++|+|...--.. .+...+.|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 344556777788888888888 77632 3445566678888888888886421111 123456789999999998
Q ss_pred ccc----CCccccCCCCCceEEc--ccccCCCC----Cccccccccccceeeeccccccc
Q 037042 139 HGG----IPSALSNCTYLRILRL--SYNDFAGG----IPKEIGNLTKLEELYLSFNGLQG 188 (1002)
Q Consensus 139 ~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 188 (1002)
+.. +...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+..
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 853 5667888899999999 88999743 34455666899999999999863
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.39 E-value=5.3e-08 Score=102.31 Aligned_cols=66 Identities=27% Similarity=0.321 Sum_probs=32.8
Q ss_pred cccccCceeeccCCCCCCC--CcccccccccceeeeCCCCccCccCcccccCCc--cccEEEccCeeecccC
Q 037042 492 WNLKDILYLNLSSNSLTGP--LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIK--DLQFLFLEYNILQGSI 559 (1002)
Q Consensus 492 ~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~ 559 (1002)
.++++|+.|+|++|+|++. +|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 3455666666666666652 223444555555555555555543 2222222 4555555555544433
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.33 E-value=4.4e-08 Score=98.03 Aligned_cols=42 Identities=14% Similarity=0.152 Sum_probs=18.9
Q ss_pred ccCCCCCceEEcccccCCCC----Cccccccccccceeeecccccc
Q 037042 146 LSNCTYLRILRLSYNDFAGG----IPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 146 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
+...++|++|+|++|+|... +...+...++|++|+|++|.++
T Consensus 61 L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 61 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34444555555555554321 2222333344555555555554
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=5.9e-06 Score=89.76 Aligned_cols=136 Identities=15% Similarity=0.111 Sum_probs=93.3
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCC---CcceeeeEEecCchhhHHHHHhhcc
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHR---NIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
.+.++.|....||+. |..++||+-.. ......+.+|.++++.+.+. .|.+.+.++.... ...++||||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~---g~~~~v~e~ 94 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD---GNPFVGYRK 94 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT---SCEEEEEEC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC---CceEEEEec
Confidence 456888988999998 56788998432 23456789999999999642 3566666664221 123599999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-----------------------------------------
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG----------------------------------------- 826 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------------------------------------- 826 (1002)
++|.++.+.... .++..+...++.++++.++.||..
T Consensus 95 i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 95 VQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp CCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred cCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 999888763221 134445555566666666666532
Q ss_pred ----------------CCCCcEEccCCCCCeeeCC---CCc-EEEecccccc
Q 037042 827 ----------------YSTPVIHCDLKPSNVLLGD---NMV-AHLSDFGITK 858 (1002)
Q Consensus 827 ----------------~~~~iiHrDlkp~NILl~~---~~~-~kl~DfGla~ 858 (1002)
....++|+|++|.||+++. ++. +.|+||+.+.
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 1335799999999999987 455 5899999775
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.3e-05 Score=85.47 Aligned_cols=134 Identities=16% Similarity=0.062 Sum_probs=96.6
Q ss_pred eeeccCcc-eEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 713 LIGRGGFG-SVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 713 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
.+..|..| .||+.... ++..++||+-... ....+.+|...++.+. +--|.++++++...+ ..++|||+++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~----~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD----DAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT----EEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC----eEEEEEEeeC
Confidence 45556555 69988754 5678999986532 3567888999999884 434778888877665 3469999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-------------------------------------------
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG------------------------------------------- 826 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------- 826 (1002)
|.++.+...... .....++.+++..++.||..
T Consensus 104 G~~~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 104 GKTAFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp SEEHHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred CccccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 988877654321 22345677778888888841
Q ss_pred ------------CCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 827 ------------YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 827 ------------~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
....++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237999999999999987777899999774
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=1.1e-05 Score=89.98 Aligned_cols=83 Identities=10% Similarity=0.009 Sum_probs=55.7
Q ss_pred cee-eccCcceEEEEEeC-------CCcEEEEEEeeccc---chhHHHHHHHHHHHHhcc-C--CCcceeeeEEecCchh
Q 037042 712 NLI-GRGGFGSVYKARIQ-------DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIR-H--RNIIKIISCCSIGDFK 777 (1002)
Q Consensus 712 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~ 777 (1002)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + ..+.+++.++.....
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~- 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV- 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT-
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc-
Confidence 567 78889999998754 26788999865432 101245788999998884 3 357778887755421
Q ss_pred hHHHHHhhccCCCCChhH
Q 037042 778 ALFKALALEYMPHGSLEK 795 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~ 795 (1002)
....++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 112358999999877654
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=9.7e-05 Score=83.44 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=48.3
Q ss_pred CceeeccCcceEEEEEeC-CCcEEEEEEeecccc-------hhHHHHHHHHHHHHhccC--C-CcceeeeEEecCchhhH
Q 037042 711 NNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-------RAFKSFDVECEVMKSIRH--R-NIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~ 779 (1002)
.+.+|.|..+.||+++.. +++.|+||....... .....+..|.++++.+.. + .+.+++.+.. +
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~--~---- 108 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT--E---- 108 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--T----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcC--C----
Confidence 467899999999999754 468899998653211 123456778999888742 3 3445665432 2
Q ss_pred HHHHhhccCCCC
Q 037042 780 FKALALEYMPHG 791 (1002)
Q Consensus 780 ~~~lv~e~~~~g 791 (1002)
..++||||+++.
T Consensus 109 ~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 MAVTVMEDLSHL 120 (397)
T ss_dssp TTEEEECCCTTS
T ss_pred ccEEEEEeCCCc
Confidence 235899999764
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00011 Score=81.24 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=77.4
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc--CCCcceeeeE------EecCchhhHHHHH
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR--HRNIIKIISC------CSIGDFKALFKAL 783 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~------~~~~~~~~~~~~l 783 (1002)
+.|+.|..+.||+....+| .+++|+.... ...+..|.++++.+. .-.+.+++.. ....+ ..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~----~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGS----FLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETT----EEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECC----EEEE
Confidence 4566677899999987655 5899998752 233445666666553 1223444331 11111 2358
Q ss_pred hhccCCCCChh--------------HhhhccCC-------------cCCHHHH---------------------------
Q 037042 784 ALEYMPHGSLE--------------KYLYSSNY-------------ILDIFQR--------------------------- 809 (1002)
Q Consensus 784 v~e~~~~g~L~--------------~~l~~~~~-------------~l~~~~~--------------------------- 809 (1002)
||||++|.++. ..++.... ...|...
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 89999886542 11111000 0122110
Q ss_pred ----HHHHHHHHHHHHHHHc----------CCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 810 ----LNIMIDVASALEYLYF----------GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 810 ----~~i~~~ia~~l~~LH~----------~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..+...+.+++++|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666652 125789999999999999888899999999764
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.42 E-value=3.1e-05 Score=75.24 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=40.7
Q ss_pred cceeeeCCCCccCccCcccccCCccccEEEccCee-ecccCCcccccc----cccceecccccc-ccCCCcccccCCCcc
Q 037042 520 VLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI-LQGSIPDSFGDL----MSLKSLNLSNNN-LSGSIPVSLEKLSYL 593 (1002)
Q Consensus 520 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 593 (1002)
.|+.||+|++.|+..--..+.++++|+.|+|+++. |++.--..++.+ ++|+.|+|++|. ||..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555555544333444555555555555553 443332333332 246666666653 543322344455666
Q ss_pred ceeeCCCCc
Q 037042 594 KDLNLSFNK 602 (1002)
Q Consensus 594 ~~L~Ls~N~ 602 (1002)
+.|+|++.+
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666665543
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.39 E-value=3e-05 Score=75.30 Aligned_cols=36 Identities=11% Similarity=0.013 Sum_probs=22.2
Q ss_pred CCCceEEccccc-CCCCCccccccccccceeeecccc
Q 037042 150 TYLRILRLSYND-FAGGIPKEIGNLTKLEELYLSFNG 185 (1002)
Q Consensus 150 ~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 185 (1002)
++|++|+|++|. ++..--..+.++++|++|+|+++.
T Consensus 114 ~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 114 KSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 357777777763 553323345667777777777764
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00058 Score=73.18 Aligned_cols=78 Identities=14% Similarity=0.164 Sum_probs=56.8
Q ss_pred CCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-C--CCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-H--RNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
....+.+|.|..+.||+.+..+|+.|+||+-..........+..|++.|+.+. . --+.+++++. .. ++|
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~~------~lv 88 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--DR------TLA 88 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--TT------EEE
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc--Cc------eEE
Confidence 44557789999999999999999999999876544334456889999999884 2 2355555542 22 478
Q ss_pred hccCCCCCh
Q 037042 785 LEYMPHGSL 793 (1002)
Q Consensus 785 ~e~~~~g~L 793 (1002)
|||++++..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 899877643
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0006 Score=73.60 Aligned_cols=137 Identities=12% Similarity=0.078 Sum_probs=88.9
Q ss_pred CCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc---CCCcceeeeEEecCchhhHHHHHhhc
Q 037042 710 ENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR---HRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
..+.|+.|....+|+.+.. +..++||+.... ....+..|.+.++.+. ...+++.++++...+ ..++|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g----~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG----HSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS----EEEEEEE
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC----ceEEEEE
Confidence 3467899999999999864 678889987643 3567888999998884 356888888776543 3469999
Q ss_pred cCCCCChhH-----------hhhccCC---------------------cCCHHHHH---HHHH----------------H
Q 037042 787 YMPHGSLEK-----------YLYSSNY---------------------ILDIFQRL---NIMI----------------D 815 (1002)
Q Consensus 787 ~~~~g~L~~-----------~l~~~~~---------------------~l~~~~~~---~i~~----------------~ 815 (1002)
|+++..+.. .++.... .-+|.... ++.. .
T Consensus 112 ~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~ 191 (312)
T 3jr1_A 112 ALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDL 191 (312)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHH
T ss_pred eccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 999876521 1222110 11343221 1111 1
Q ss_pred HH-HHHHHHH-cCCCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 816 VA-SALEYLY-FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 816 ia-~~l~~LH-~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
+. .....|. ......++|+|+.+.|++++.++ +.|.||.
T Consensus 192 l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 192 IVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 1122332 12256799999999999999887 8899974
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0015 Score=60.39 Aligned_cols=57 Identities=18% Similarity=0.190 Sum_probs=35.7
Q ss_pred EEeCCCCccc-ccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccc
Q 037042 130 SLNLSKNMFH-GGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQG 188 (1002)
Q Consensus 130 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 188 (1002)
.++.+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|++|+|++|.+.=
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 4566666664 24443322 256777777777775555567777777777777777654
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0013 Score=74.77 Aligned_cols=80 Identities=11% Similarity=0.071 Sum_probs=49.4
Q ss_pred CCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCC---CcCcccchHHHHHHHHH
Q 037042 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG---RVSTNGDVYNFGVMLME 904 (1002)
Q Consensus 828 ~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~e 904 (1002)
...++|+|++|.||+++.++ ++++||+.+..-.+.-.... ....-...|.+|+..... .-....++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA-YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH-HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999998776 99999998864322111000 000011346666654321 12233556688888888
Q ss_pred HHhCC
Q 037042 905 TFTGK 909 (1002)
Q Consensus 905 lltg~ 909 (1002)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87753
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00017 Score=71.50 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=21.1
Q ss_pred cccCCCCCceEEcccccCCC----CCccccccccccceeeecccccc
Q 037042 145 ALSNCTYLRILRLSYNDFAG----GIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 145 ~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
.+..-+.|+.|+|++|+|.. .+...+..-+.|++|+|++|.|+
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 34444555555555555542 12223333445555555555554
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00087 Score=72.32 Aligned_cols=131 Identities=11% Similarity=0.134 Sum_probs=77.0
Q ss_pred CCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCc-ceeeeEEecCchhhHHHHHhhc
Q 037042 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI-IKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+...+.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+ .+++++....+ ++|+|
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~~------~~v~e 87 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPATG------VMVTR 87 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTTTC------CEEEE
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECCCC------EEEEe
Confidence 444678999999999998 56889987643211 1223568888877743223 45665443222 47899
Q ss_pred cC-CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHc----------------------------------------
Q 037042 787 YM-PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF---------------------------------------- 825 (1002)
Q Consensus 787 ~~-~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~---------------------------------------- 825 (1002)
|+ ++.++...-... +..++.++++.|+-+|.
T Consensus 88 ~i~~g~~l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (301)
T 3dxq_A 88 YIAGAQTMSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREA 159 (301)
T ss_dssp CCTTCEECCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHH
T ss_pred ecCCCccCCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHH
Confidence 99 665553210000 00122222222222221
Q ss_pred ----------CCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 826 ----------GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 826 ----------~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.....++|+|+.+.||+ ..++.+.++||..+..
T Consensus 160 ~~l~~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 160 GGVRSALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HHHHHHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 11345899999999999 5566789999998753
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0028 Score=69.38 Aligned_cols=139 Identities=12% Similarity=0.053 Sum_probs=72.2
Q ss_pred ceeeccCcce-EEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-C-CCcceeeeEEecCchhhHHHHHhhccC
Q 037042 712 NLIGRGGFGS-VYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-H-RNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 712 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
+.|+.|+... +|+....+|+.+++|...... ...+..|+.+++.+. + -.+.+++.+....+ ++|||++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g------~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG------LLLIEDL 94 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT------EEEECCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC------EEEEeeC
Confidence 3455554444 677765446778888654321 123456777777774 2 23556666532221 4788988
Q ss_pred CCCChhHhhhccC-------------------------CcCCHHHHH-------H-------------HHHHHHHHHHHH
Q 037042 789 PHGSLEKYLYSSN-------------------------YILDIFQRL-------N-------------IMIDVASALEYL 823 (1002)
Q Consensus 789 ~~g~L~~~l~~~~-------------------------~~l~~~~~~-------~-------------i~~~ia~~l~~L 823 (1002)
.+..+.+++.... ...+..... . ....+...++.+
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 7766644332110 001111000 0 001111222222
Q ss_pred H---cCCCCCcEEccCCCCCeeeCCC----CcEEEeccccccc
Q 037042 824 Y---FGYSTPVIHCDLKPSNVLLGDN----MVAHLSDFGITKL 859 (1002)
Q Consensus 824 H---~~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~~ 859 (1002)
. ......++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1 1125679999999999999874 6899999998763
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.00034 Score=69.23 Aligned_cols=62 Identities=11% Similarity=0.165 Sum_probs=26.6
Q ss_pred CCccEEEccCC-ccCc----cCCccccCCCCCCEEEccCCccccc----CCccccCCccccEEEccCCcCC
Q 037042 399 TNLIGFYLGGN-NLNG----SIPITLGKLQKLQVLYFPDNKLEGS----IPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 399 ~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
+.|++|+|++| +|.. .+...+..-+.|+.|+|++|.|... +.+.+..-+.|+.|+|++|.|.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 44555555543 4431 1223334444555555555555421 1222223344555555555544
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0037 Score=69.31 Aligned_cols=138 Identities=12% Similarity=0.132 Sum_probs=80.5
Q ss_pred ceeeccCcceEEEEEeC--------CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHH
Q 037042 712 NLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+.+..|-...+|+.... +++.|++|+.... ........+|.++++.+. +.-..++++++.. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-g------- 126 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE-G------- 126 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT-E-------
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC-c-------
Confidence 56777888899999864 2578999986332 223456678999998884 3334566666532 1
Q ss_pred HhhccCCCCChhHh-----------------hhccC----CcCC--HHHHHHHHHHHHH-------------------HH
Q 037042 783 LALEYMPHGSLEKY-----------------LYSSN----YILD--IFQRLNIMIDVAS-------------------AL 820 (1002)
Q Consensus 783 lv~e~~~~g~L~~~-----------------l~~~~----~~l~--~~~~~~i~~~ia~-------------------~l 820 (1002)
+||||++|.++..- ++... .... +.++.++..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 78999988665311 11111 1111 2333333333211 22
Q ss_pred HHHH----c-CCCCCcEEccCCCCCeeeCCC----CcEEEecccccc
Q 037042 821 EYLY----F-GYSTPVIHCDLKPSNVLLGDN----MVAHLSDFGITK 858 (1002)
Q Consensus 821 ~~LH----~-~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~ 858 (1002)
+.|. . .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2222 1 123569999999999999876 789999998775
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0023 Score=69.71 Aligned_cols=159 Identities=14% Similarity=0.135 Sum_probs=83.7
Q ss_pred cCHHHHHHhhcCCCC-----CceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCC--cceee
Q 037042 696 FSYLELCQATDGFSE-----NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN--IIKII 768 (1002)
Q Consensus 696 ~~~~~~~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~ 768 (1002)
++.+++......|.. .+.|+.|....||+....+| .+++|+..... ....+..|+.+++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344455555555654 24466788889999987655 68899887521 2234566888877774212 33333
Q ss_pred eEEecCch---hhHHHHHhhccCCCCChhH--------------hhhcc----CCc----C---CHHHHHH---------
Q 037042 769 SCCSIGDF---KALFKALALEYMPHGSLEK--------------YLYSS----NYI----L---DIFQRLN--------- 811 (1002)
Q Consensus 769 ~~~~~~~~---~~~~~~lv~e~~~~g~L~~--------------~l~~~----~~~----l---~~~~~~~--------- 811 (1002)
... .+.. .....+++++|++|..+.. .++.. ... . .|.....
T Consensus 84 ~~~-~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 84 PRK-DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CBT-TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred CCC-CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 211 0000 0002257788888764321 01111 000 0 1211000
Q ss_pred ---HHHHHHHHHHHHHcC----CCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 812 ---IMIDVASALEYLYFG----YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 812 ---i~~~ia~~l~~LH~~----~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
+...+.+.+++++.. ...+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455555421 24579999999999999887666899998764
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0031 Score=58.20 Aligned_cols=56 Identities=25% Similarity=0.278 Sum_probs=35.5
Q ss_pred EEEecccccc-cccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCC
Q 037042 105 LLSFGDNQLS-GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFA 163 (1002)
Q Consensus 105 ~L~L~~N~l~-~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 163 (1002)
.++.+++.|+ ..+|..+ -++|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l---p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF---PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC---CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC---CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4455555553 2455443 234677777777777555666777888888888888664
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0043 Score=70.34 Aligned_cols=72 Identities=18% Similarity=0.211 Sum_probs=48.3
Q ss_pred ceeeccCcceEEEEEeCC--------CcEEEEEEeecccchhHHHHHHHHHHHHhccCCC-cceeeeEEecCchhhHHHH
Q 037042 712 NLIGRGGFGSVYKARIQD--------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN-IIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~~ 782 (1002)
+.|+.|....||++...+ ++.|++|+..... ....+..|..+++.+...+ ..++++.+.. .
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~--------g 148 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG--------G 148 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------E
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC--------C
Confidence 567888889999998653 5789999874321 1144557999988885333 3566765531 1
Q ss_pred HhhccCCCCCh
Q 037042 783 LALEYMPHGSL 793 (1002)
Q Consensus 783 lv~e~~~~g~L 793 (1002)
+|+||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 78899876444
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0065 Score=69.18 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=47.6
Q ss_pred ceeeccCcceEEEEEeCC-CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCc-ceeeeEEecCchhhHHHHHhhccCC
Q 037042 712 NLIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI-IKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
+.|+.|-...+|+....+ +..|++|+........ ....+|..+++.+...++ .++++++. +. +||||++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~-~G-------~v~e~I~ 184 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT-NG-------RIEEFMD 184 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET-TE-------EEEECCC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC-Ce-------EEEEeeC
Confidence 568888889999998765 5788999875432211 122578999998864444 56777662 22 4899998
Q ss_pred CCCh
Q 037042 790 HGSL 793 (1002)
Q Consensus 790 ~g~L 793 (1002)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7554
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.011 Score=58.61 Aligned_cols=105 Identities=12% Similarity=0.049 Sum_probs=70.4
Q ss_pred CChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeec
Q 037042 791 GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870 (1002)
Q Consensus 791 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 870 (1002)
-+|.+.+...+.++++.+++.++.|.+++|.-+-. .+.-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 48999999999999999999999999999887621 11101223456889999999998764 1110
Q ss_pred cCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCc
Q 037042 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTN 913 (1002)
Q Consensus 871 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~ 913 (1002)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-.
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~ 137 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN 137 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence 0112366888753 345788899999999999888655543
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0069 Score=66.02 Aligned_cols=141 Identities=10% Similarity=0.097 Sum_probs=78.6
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCC--CcceeeeEEecCch---hhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHR--NIIKIISCCSIGDF---KALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~---~~~~~~lv~e 786 (1002)
..++ |....||+....+|+.+++|+.+... .....+..|..+++.+... .+++++.. .+.. .....++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec--CCcEEEEECCEEEEEEE
Confidence 4566 88889999887778789999986432 1245667788888877422 24444443 1110 0012245788
Q ss_pred cCCCCChhH----h----------hhc----c----CCcCCHHHH----HH---------------HHHHHHHHHHHHHc
Q 037042 787 YMPHGSLEK----Y----------LYS----S----NYILDIFQR----LN---------------IMIDVASALEYLYF 825 (1002)
Q Consensus 787 ~~~~g~L~~----~----------l~~----~----~~~l~~~~~----~~---------------i~~~ia~~l~~LH~ 825 (1002)
|++|..+.. . ++. . ....++... .. +...+.+.++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 887754320 0 111 0 001121110 00 01111122233221
Q ss_pred C----CCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 826 G----YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 826 ~----~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
. ....++|+|+++.||+++ + .+.|+||+.+.
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1 245689999999999999 4 89999998764
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0084 Score=66.59 Aligned_cols=73 Identities=12% Similarity=0.221 Sum_probs=43.5
Q ss_pred ceeeccCcceEEEEEeCC---------CcEEEEEEeecccchhHHHHHHHHHHHHhccCCC-cceeeeEEecCchhhHHH
Q 037042 712 NLIGRGGFGSVYKARIQD---------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN-IIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 781 (1002)
+.++.|....+|+....+ ++.+++|+....... ......|.++++.+...+ +.++++.. .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~------ 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG------ 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC------
Confidence 467788888999998654 268889987543221 123467888888885333 44666543 11
Q ss_pred HHhhccCCCCCh
Q 037042 782 ALALEYMPHGSL 793 (1002)
Q Consensus 782 ~lv~e~~~~g~L 793 (1002)
++||||++|.++
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 368888887543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=95.06 E-value=0.018 Score=62.99 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=28.0
Q ss_pred CCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 828 ~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35699999999999999888899999987753
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=93.96 E-value=0.057 Score=60.60 Aligned_cols=73 Identities=15% Similarity=0.209 Sum_probs=47.7
Q ss_pred ceeeccCcceEEEEEeCC--------CcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHH
Q 037042 712 NLIGRGGFGSVYKARIQD--------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+.+..|-...+|+....+ ++.|++|+..... .......+|.++++.+. +.-..++++.+ .+ +
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~~------~ 146 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--PE------G 146 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--TT------E
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--CC------C
Confidence 457778888999998653 5789999865432 22223467888888884 33345556533 22 4
Q ss_pred HhhccCCCCCh
Q 037042 783 LALEYMPHGSL 793 (1002)
Q Consensus 783 lv~e~~~~g~L 793 (1002)
.|+||++|.++
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 78999998664
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=91.65 E-value=0.28 Score=54.74 Aligned_cols=29 Identities=28% Similarity=0.387 Sum_probs=24.9
Q ss_pred CcEEccCCCCCeee------CCCCcEEEecccccc
Q 037042 830 PVIHCDLKPSNVLL------GDNMVAHLSDFGITK 858 (1002)
Q Consensus 830 ~iiHrDlkp~NILl------~~~~~~kl~DfGla~ 858 (1002)
.++|+|+.+.||++ +++..++++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 456789999999875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1002 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-59 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-54 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-53 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-53 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-52 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 9e-52 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-50 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-49 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-49 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 6e-49 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 6e-49 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 5e-48 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 6e-48 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-47 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-47 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-47 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-47 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 3e-46 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 5e-46 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 7e-46 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 9e-46 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-45 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-45 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-45 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 5e-45 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 6e-45 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-44 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-44 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 3e-43 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-43 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 5e-43 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-42 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-42 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-42 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-40 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-39 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-37 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-36 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-36 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-36 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-36 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-36 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 5e-36 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-35 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-34 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 3e-34 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-34 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 9e-34 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-33 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-33 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-32 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-32 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-31 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 9e-31 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-30 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-30 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-28 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 4e-28 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 5e-28 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 8e-28 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-27 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-25 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-17 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-15 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-09 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-08 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-05 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-25 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-24 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 4e-22 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-20 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-18 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-15 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-08 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 7e-08 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 9e-23 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 8e-21 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-09 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-19 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-19 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-16 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-16 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-15 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-15 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 5e-15 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-10 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 7e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 4e-08 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 5e-08 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 3e-04 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 7e-09 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 5e-08 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-07 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 8e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 7e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 7e-08 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-06 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.003 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.003 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 8e-08 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 4e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 2e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 3e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 4e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.001 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 5e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.004 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.004 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 7e-07 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 5e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.003 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 3e-06 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 5e-05 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 8e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.004 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 6e-06 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 2e-04 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 0.001 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 0.002 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 2e-05 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 2e-04 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 0.002 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 1e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 3e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.001 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.004 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 2e-04 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 0.003 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 0.004 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 2e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 7e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.002 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.002 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.003 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 202 bits (516), Expect = 2e-59
Identities = 64/279 (22%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G FG+VYK + +VAVK+ N + ++F E V++ RH NI+ +
Sbjct: 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
+ A+ ++ SL +L+ ++ + ++I A ++YL+
Sbjct: 72 YSTAPQL-----AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---K 123
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY---GSE 886
+IH DLK +N+ L +++ + DFG+ + +R Q +I +MA E +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946
S DVY FG++L E TG+ P + I N + +L + K+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV--------- 234
Query: 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+ C + + EC + ++R +I+ +
Sbjct: 235 ------RSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (477), Expect = 3e-54
Identities = 57/281 (20%), Positives = 119/281 (42%), Gaps = 30/281 (10%)
Query: 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNII 765
+ +G G FG V+ +VAVK Q + +F E +MK ++H+ ++
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV 71
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI-LDIFQRLNIMIDVASALEYLY 824
++ + + + EYM +GSL +L + + I L I + L++ +A + ++
Sbjct: 72 RLYAVVTQEPI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI- 125
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG 884
IH DL+ +N+L+ D + ++DFG+ +L+ ++++ + I + A E
Sbjct: 126 --EERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAI 182
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944
+ G + DV++FG++L E T + +++ +
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY--------------- 227
Query: 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+ V + C ++ + C E PE R + + L
Sbjct: 228 ----RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (472), Expect = 1e-53
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 28/281 (9%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
+ IG G FG V+ + +VA+K + + + F E EVM + H ++++
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
C L E+M HG L YL + + L + +DV + YL
Sbjct: 66 YGVCLEQAPICLV----FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--- 118
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG 887
VIH DL N L+G+N V +SDFG+T+ + +DQ+ + T T + + + E S
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 888 RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947
R S+ DV++FGV++ E F+ K E + ++ + ++ L S
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------RLYKPRLASTH- 230
Query: 948 IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
V+ + C E PE R ++ +L +I
Sbjct: 231 ------------VYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (473), Expect = 2e-53
Identities = 62/291 (21%), Positives = 110/291 (37%), Gaps = 18/291 (6%)
Query: 714 IGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773
IG+G FG V++ + G EVAVK+F+ + R++ + E +RH NI+ I+ +
Sbjct: 11 IGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWF-REAEIYQTVMLRHENILGFIAADNK 68
Query: 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY-----FGYS 828
+ L +Y HGSL YL + Y + + + + + AS L +L+
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTP--ATIGYMALEY--- 883
+ H DLK N+L+ N ++D G+ + T YMA E
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186
Query: 884 ---GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN-DWLLISIMKIVD 939
D+Y G++ E + + V D + + K+V
Sbjct: 187 SINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 246
Query: 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990
L + + + + EC + R+ A I L +++
Sbjct: 247 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 183 bits (464), Expect = 3e-52
Identities = 59/310 (19%), Positives = 125/310 (40%), Gaps = 43/310 (13%)
Query: 696 FSYLELCQATDGFSEN---------NLIGRGGFGSVYKARI----QDGMEVAVKVFNQQ- 741
F++ + +A F++ +IG G FG V + + + VA+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 742 CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN 801
+ + F E +M H N+I + + + E+M +GSL+ +L ++
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII----TEFMENGSLDSFLRQND 122
Query: 802 YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861
+ Q + ++ +A+ ++YL +H DL N+L+ N+V +SDFG+++ L
Sbjct: 123 GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 179
Query: 862 REDQFVTQTQT---PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE 918
+ T T I + A E + ++ DV+++G+++ E + +
Sbjct: 180 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER------- 232
Query: 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA 978
D ++ ++ +D + C S + + ++C + R
Sbjct: 233 ------PYWDMTNQDVINAIE------QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 280
Query: 979 KEIVTRLLKI 988
+IV L K+
Sbjct: 281 GQIVNTLDKM 290
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (457), Expect = 9e-52
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 28/281 (9%)
Query: 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKI 767
+ +G G FG V + + +VA+K+ + + F E +VM ++ H ++++
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
C+ + EYM +G L YL + Q L + DV A+EYL
Sbjct: 65 YGVCTKQRPIFII----TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES-- 118
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG 887
+H DL N L+ D V +SDFG+++ + +D++ + + + + E
Sbjct: 119 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 888 RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947
+ S+ D++ FGV++ E ++ K E F T +H I G L R
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH------------IAQGLRLYRPH 224
Query: 948 IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ V+ + C E ++R K +++ +L +
Sbjct: 225 L-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (447), Expect = 4e-50
Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 35/293 (11%)
Query: 700 ELCQATDGFS-ENNLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQCGRAF-KSFDVECE 754
+L D + +G G FGSV + + ++VA+KV Q +A + E +
Sbjct: 2 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 61
Query: 755 VMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMI 814
+M + + I+++I C L +E G L K+L + + ++
Sbjct: 62 IMHQLDNPYIVRLIGVCQAEAL-----MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH 116
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
V+ ++YL +H DL NVLL + A +SDFG++K L +D + T
Sbjct: 117 QVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 173
Query: 875 -TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLI 932
+ + A E + + S+ DV+++GV + E + G+KP ++ +
Sbjct: 174 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV------------ 221
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+ I G + +C ++ + +C + E R + + R+
Sbjct: 222 -MAFIEQGKRMECPP-------ECPPELYALMSDCWIYKWEDRPDFLTVEQRM 266
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 1e-49
Identities = 72/278 (25%), Positives = 114/278 (41%), Gaps = 34/278 (12%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
IG+G FG V G +VAVK ++F E VM +RH N+++++
Sbjct: 13 QTIGKGEFGDVMLGD-YRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 69
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTP 830
+ EYM GSL YL S +L L +DV A+EYL
Sbjct: 70 VEEKGGLY---IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNN 123
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVS 890
+H DL NVL+ ++ VA +SDFG+TK + TQ + + A E E + S
Sbjct: 124 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFS 178
Query: 891 TNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQF 950
T DV++FG++L E ++ + + LK + ++ G + D
Sbjct: 179 TKSDVWSFGILLWEIYSFGRV----PYPRIPLKDV--------VPRVEKGYKMDAPD--- 223
Query: 951 VAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
C V+ + C R + ++ +L I
Sbjct: 224 ----GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 257
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (443), Expect = 2e-49
Identities = 58/281 (20%), Positives = 116/281 (41%), Gaps = 30/281 (10%)
Query: 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNII 765
+ +G+G FG V+ VA+K + ++F E +VMK +RH ++
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 75
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIF-QRLNIMIDVASALEYLY 824
++ + S + EYM GSL +L Q +++ +AS + Y+
Sbjct: 76 QLYAVVSEEPI-----YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG 884
+H DL+ +N+L+G+N+V ++DFG+ +L+ ++++ + I + A E
Sbjct: 131 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 186
Query: 885 SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944
GR + DV++FG++L E T + L +
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY--------------- 231
Query: 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
+ +C + ++ +C + PE+R + + L
Sbjct: 232 ----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 268
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 6e-49
Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 32/285 (11%)
Query: 711 NNLIGRGGFGSVYKARIQD----GMEVAVKVFNQQCGRAF-KSFDVECEVMKSIRHRNII 765
N +IGRG FG VY + D + AVK N+ F E +MK H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
++ C + L + L YM HG L ++ + + + + + VA +++L
Sbjct: 92 SLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 148
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED--QFVTQTQTPATIGYMALEY 883
+H DL N +L + ++DFG+ + + ++ +T + +MALE
Sbjct: 149 ---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 205
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
+ +T DV++FGV+L E T P + + ++ G L
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDI--------TVYLLQGRRL 253
Query: 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ E C ++ + ++C E R + E+V+R+ I
Sbjct: 254 LQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 173 bits (439), Expect = 6e-49
Identities = 68/285 (23%), Positives = 121/285 (42%), Gaps = 30/285 (10%)
Query: 706 DGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI 764
+ + +G G +G VY+ + + VAVK + + F E VMK I+H N+
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNL 75
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYL 823
++++ C+ + E+M +G+L YL N + L + ++SA+EYL
Sbjct: 76 VQLLGVCTREPPFYII----TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 131
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY 883
IH DL N L+G+N + ++DFG+++L+T D + I + A E
Sbjct: 132 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPES 187
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
+ + S DV+ FGV+L E T G+ L + ++++
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMS----PYPGIDLSQ---------VYELLE---- 230
Query: 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+D + E C V+ + C +P R + EI +
Sbjct: 231 --KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (434), Expect = 5e-48
Identities = 64/296 (21%), Positives = 119/296 (40%), Gaps = 34/296 (11%)
Query: 699 LELCQATDGFSENNLIGRGGFGSVYKARIQD-----GMEVAVKVFNQ-QCGRAFKSFDVE 752
L + + T+ F + ++G G FG+VYK + VA+K + +A K E
Sbjct: 3 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 753 CEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNI 812
VM S+ + ++ +++ C + L + MP G L Y+ + LN
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNW 116
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT 872
+ +A + YL ++H DL NVL+ ++DFG+ KLL E++
Sbjct: 117 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 873 PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932
I +MALE + DV+++GV + E T +G+
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK----PYDGIPASE-------- 221
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
I I++ + + C V+ + ++C + + R +E++ K+
Sbjct: 222 -ISSILE------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 170 bits (431), Expect = 6e-48
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 33/288 (11%)
Query: 708 FSENNLIGRGGFGSVYKARIQDG-----MEVAVKVFNQQCG-RAFKSFDVECEVMKSIRH 761
+ +IG G FG VYK ++ + VA+K + F E +M H
Sbjct: 9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 68
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821
NII++ S + EYM +G+L+K+L + + Q + ++ +A+ ++
Sbjct: 69 HNIIRLEGVISKYKPMMII----TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMK 124
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV-TQTQTPATIGYMA 880
Y + +H DL N+L+ N+V +SDFG++++L + + T + I + A
Sbjct: 125 Y---LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181
Query: 881 LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940
E S + ++ DV++FG+++ E T + + +MK ++
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGER-------------PYWELSNHEVMKAIN- 227
Query: 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
+ + C S ++ + M+C + +R +IV+ L K+
Sbjct: 228 -----DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 270
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 169 bits (429), Expect = 1e-47
Identities = 61/282 (21%), Positives = 109/282 (38%), Gaps = 34/282 (12%)
Query: 710 ENNLIGRGGFGSVYKARIQD---GMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNI 764
E+ +G G FG+V K Q VAVK+ + E VM+ + + I
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLY 824
+++I C + L +E G L KYL + + + + ++ V+ ++YL
Sbjct: 71 VRMIGICEAESW-----MLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE 124
Query: 825 FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA-TIGYMALEY 883
+ +H DL NVLL A +SDFG++K L ++ + + + A E
Sbjct: 125 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
+ + S+ DV++FGV++ E F+ + GM + G +
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQK----PYRGMKGSEVTA--------MLEKGERM 229
Query: 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
C ++++ C E R + RL
Sbjct: 230 GCP-------AGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (433), Expect = 1e-47
Identities = 61/299 (20%), Positives = 109/299 (36%), Gaps = 22/299 (7%)
Query: 699 LELCQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKS-FDVECEVM 756
+EL D F + + +G G G V+K G+ +A K+ + + A ++ E +V+
Sbjct: 1 MEL--KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 757 KSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDV 816
I+ ++ +E+M GSL++ L + + + I V
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAV 113
Query: 817 ASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA-T 875
L YL ++H D+KPSN+L+ L DFG++ L + + T
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGT 166
Query: 876 IGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP---TNEIFNEGMTLKHWVNDWLLI 932
YM+ E S D+++ G+ L+E G+ P + E M D
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAET 226
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI--NAKEIVTRLLKIN 989
G LS + + + E + P ++ V + L N
Sbjct: 227 PPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (425), Expect = 3e-47
Identities = 55/285 (19%), Positives = 97/285 (34%), Gaps = 32/285 (11%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHR 762
+ + IG G +G K R DG + K + + E +++ ++H
Sbjct: 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASA 819
NI++ L+ + +EY G L + LD L +M + A
Sbjct: 64 NIVRYYDRIIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121
Query: 820 LEYLY--FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
L+ + V+H DLKP+NV L L DFG+ ++L + F T
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG--TPY 179
Query: 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937
YM+ E + + D+++ G +L E P + K +I
Sbjct: 180 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP-----FTAFSQKELAGKIREGKFRRI 234
Query: 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
S E + + + R + +EI+
Sbjct: 235 PYR--YSDELNEIITR-------------MLNLKDYHRPSVEEIL 264
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 168 bits (427), Expect = 3e-47
Identities = 76/324 (23%), Positives = 127/324 (39%), Gaps = 58/324 (17%)
Query: 695 RFSYLELCQATDGFSENNLIGRGGFGSVYKAR------IQDGMEVAVKVFNQQCGRAF-K 747
+ LE + IG G FG V++AR + VAVK+ ++
Sbjct: 4 KLLSLEY--PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA 61
Query: 748 SFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY----- 802
F E +M + NI+K++ C++G L EYM +G L ++L S +
Sbjct: 62 DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLL----FEYMAYGDLNEFLRSMSPHTVCS 117
Query: 803 ------------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844
L ++L I VA+ + YL +H DL N L+G
Sbjct: 118 LSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVG 174
Query: 845 DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLME 904
+NMV ++DFG+++ + D + I +M E R +T DV+ +GV+L E
Sbjct: 175 ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 234
Query: 905 TFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMA 964
F+ GM + I + DG++L+ E C ++N+
Sbjct: 235 IFSYGLQ----PYYGMAHEEV--------IYYVRDGNILACP-------ENCPLELYNLM 275
Query: 965 MECTVESPEKRINAKEIVTRLLKI 988
C + P R + I L ++
Sbjct: 276 RLCWSKLPADRPSFCSIHRILQRM 299
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (419), Expect = 3e-46
Identities = 58/276 (21%), Positives = 109/276 (39%), Gaps = 33/276 (11%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
+G G FG VYKA+ + + A KV + + + + VE +++ S H NI+K++
Sbjct: 18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP 830
+ + +E+ G+++ + L Q + AL YL+
Sbjct: 78 FYYENNLWIL----IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNK 130
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY-----GS 885
+IH DLK N+L + L+DFG++ TR Q + T +MA E
Sbjct: 131 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ--RRDSFIGTPYWMAPEVVMCETSK 188
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945
+ DV++ G+ L+E + P +E+ + LK ++ ++ S
Sbjct: 189 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW-----SS 243
Query: 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
F+ K C ++ + R ++
Sbjct: 244 NFKDFLKK-------------CLEKNVDARWTTSQL 266
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (416), Expect = 5e-46
Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 29/276 (10%)
Query: 711 NNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKI 767
+ IGRG F +VYK + +EVA + + F E E++K ++H NI++
Sbjct: 14 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
L E M G+L+ YL ++ I + + L++L+
Sbjct: 74 YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHT-R 131
Query: 828 STPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
+ P+IH DLK N+ + G + D G+ L T +MA E E
Sbjct: 132 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEM-YE 186
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946
+ + DVY FG+ ++E T + P +E N + + S K+ +
Sbjct: 187 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK--- 243
Query: 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
+ C ++ ++R + K+++
Sbjct: 244 ---------------EIIEGCIRQNKDERYSIKDLL 264
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (418), Expect = 7e-46
Identities = 62/308 (20%), Positives = 111/308 (36%), Gaps = 50/308 (16%)
Query: 706 DGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQCGRAF-KSFDVECEVMKS 758
+ S +G G FG V +A M VAVK+ ++ E +V+
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 759 I-RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSS----------------- 800
+ H NI+ ++ C+IG + EY +G L +L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVI----TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 801 NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860
LD+ L+ VA + +L S IH DL N+LL + + DFG+ + +
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDI 195
Query: 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM 920
+ +V + + +MA E + DV+++G+ L E F+
Sbjct: 196 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
Query: 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKE 980
+ +E + ++ E + ++++ C P KR K+
Sbjct: 256 KFYKMI------------------KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 297
Query: 981 IVTRLLKI 988
IV + K
Sbjct: 298 IVQLIEKQ 305
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (414), Expect = 9e-46
Identities = 54/279 (19%), Positives = 104/279 (37%), Gaps = 29/279 (10%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN-QQCGRAFKSFDVECEVMKSIRHRN 763
+ + +G G +G V A VAVK+ + ++ ++ E + K + H N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
++K G+ + LF LEY G L + + + + + + YL
Sbjct: 65 VVKFYGHRREGNIQYLF----LEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYL 119
Query: 824 YFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEY 883
+ + H D+KP N+LL + +SDFG+ + ++ + T+ Y+A E
Sbjct: 120 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 884 GSEGRVSTNG-DVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942
DV++ G++L G+ P ++ + W ++ K +
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI---- 232
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + K VE+P RI +I
Sbjct: 233 -DSAPLALLHK-------------ILVENPSARITIPDI 257
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (416), Expect = 1e-45
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 49/303 (16%)
Query: 706 DGFSENNLIGRGGFGSVYKARIQDG---MEVAVKVFNQQCGR-AFKSFDVECEVMKSI-R 760
+ ++IG G FG V KARI+ M+ A+K + + + F E EV+ +
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 761 HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI---------------LD 805
H NII ++ C + L +EY PHG+L +L S + L
Sbjct: 70 HPNIINLLGACEHRGYLYLA----IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 125
Query: 806 IFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865
Q L+ DVA ++YL IH DL N+L+G+N VA ++DFG+++ ++
Sbjct: 126 SQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEV 179
Query: 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHW 925
+V +T + +MA+E + +TN DV+++GV+L E + GMT
Sbjct: 180 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT----PYCGMTCAEL 235
Query: 926 VNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985
K+ G L + C V+++ +C E P +R + +I+ L
Sbjct: 236 YE--------KLPQGYRLEKP-------LNCDDEVYDLMRQCWREKPYERPSFAQILVSL 280
Query: 986 LKI 988
++
Sbjct: 281 NRM 283
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 163 bits (414), Expect = 2e-45
Identities = 61/285 (21%), Positives = 103/285 (36%), Gaps = 40/285 (14%)
Query: 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQ---QCGRAFKSFDVECEVMKSIR 760
FS+ IG G FG+VY AR +++ VA+K + Q ++ E ++ +R
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 761 HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASAL 820
H N I+ C L +EY + + L + + L
Sbjct: 74 HPNTIQYRGCYLREHTAWLV----MEYCLGSASDLLEVHKKP-LQEVEIAAVTHGALQGL 128
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA 880
YL+ S +IH D+K N+LL + + L DFG ++ + FV T +MA
Sbjct: 129 AYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV------GTPYWMA 179
Query: 881 LEY---GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937
E EG+ DV++ G+ +E K P + N+ +
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW 239
Query: 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
S FV C + P+ R ++ ++
Sbjct: 240 ------SEYFRNFVDS-------------CLQKIPQDRPTSEVLL 265
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (414), Expect = 4e-45
Identities = 56/303 (18%), Positives = 106/303 (34%), Gaps = 55/303 (18%)
Query: 713 LIGRGGFGSVYKA------RIQDGMEVAVKVFNQQCGRAF-KSFDVECEVMKSI-RHRNI 764
++G G FG V A + ++VAVK+ ++ + ++ E ++M + H NI
Sbjct: 44 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 103
Query: 765 IKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN----------------------Y 802
+ ++ C++ L EY +G L YL S
Sbjct: 104 VNLLGACTLSGPIYLI----FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 159
Query: 803 ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862
+L L VA +E+L +H DL NVL+ V + DFG+ + +
Sbjct: 160 VLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 216
Query: 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922
+ +V + + +MA E EG + DV+++G++L E F+
Sbjct: 217 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF 276
Query: 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
+ + + ++ + C KR + +
Sbjct: 277 YKLI------------------QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLT 318
Query: 983 TRL 985
+ L
Sbjct: 319 SFL 321
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (411), Expect = 5e-45
Identities = 63/308 (20%), Positives = 126/308 (40%), Gaps = 42/308 (13%)
Query: 708 FSENNLIGRGGFGSVYKA------RIQDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIR 760
+ + +G+G FG VY+ + + VA+K N+ R F E VMK
Sbjct: 22 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 81
Query: 761 HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYI---------LDIFQRLN 811
++++++ S G + +E M G L+ YL S + + +
Sbjct: 82 CHHVVRLLGVVSQGQPTLVI----MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 137
Query: 812 IMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQ 871
+ ++A + YL + +H DL N ++ ++ + DFG+T+ + D + +
Sbjct: 138 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 194
Query: 872 TPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931
+ +M+ E +G +T DV++FGV+L E T + + + L+
Sbjct: 195 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR-------- 246
Query: 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991
+++G LL + D C +F + C +P+ R + EI++ + + +
Sbjct: 247 ----FVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 295
Query: 992 DFNGYPSY 999
F Y
Sbjct: 296 GFREVSFY 303
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (408), Expect = 6e-45
Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 33/281 (11%)
Query: 713 LIGRGGFGSVYKARI----QDGMEVAVKVFNQQCGRAFKS-FDVECEVMKSIRHRNIIKI 767
IG G FG V++ + VA+K + + F E M+ H +I+K+
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
I + + +E G L +L Y LD+ + +++AL YL
Sbjct: 74 IGVITENPV-----WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE--- 125
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG 887
S +H D+ NVL+ N L DFG+++ + + ++ I +MA E +
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR 184
Query: 888 RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRED 947
R ++ DV+ FGV + E + + +I +G L
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG------------RIENGERLPMPP 232
Query: 948 IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
C ++++ +C P +R E+ +L I
Sbjct: 233 -------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (406), Expect = 1e-44
Identities = 67/283 (23%), Positives = 98/283 (34%), Gaps = 34/283 (12%)
Query: 714 IGRGGFGSVYKARI----QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIK 766
+G G FG V + + VAVK A F E M S+ HRN+I+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 767 IISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG 826
+ K + E P GSL L + + VA + YL
Sbjct: 76 LYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE-- 128
Query: 827 YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR-EDQFVTQTQTPATIGYMALEYGS 885
S IH DL N+LL + + DFG+ + L + +D +V Q + A E
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 886 EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945
S D + FGV L E FT + N L +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID------------------K 229
Query: 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
E + E C ++N+ ++C PE R + LL+
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 159 bits (404), Expect = 2e-44
Identities = 63/290 (21%), Positives = 115/290 (39%), Gaps = 27/290 (9%)
Query: 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGR---AFKSFDVECEVMKSIR 760
+D + ++G GG V+ AR ++ +VAVKV R + F E + ++
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 761 HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASAL 820
H I+ + + +EY+ +L +++ + + + ++ D AL
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQAL 124
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA-TIGYM 879
+ + +IH D+KP+N+++ + DFGI + + VTQT T Y+
Sbjct: 125 NFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 181
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939
+ E V DVY+ G +L E TG+ P + +H D + S
Sbjct: 182 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA----R 237
Query: 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-NAKEIVTRLLKI 988
LS + V K ++PE R A E+ L+++
Sbjct: 238 HEGLSADLDAVVLK-------------ALAKNPENRYQTAAEMRADLVRV 274
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (397), Expect = 3e-43
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 30/271 (11%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISC 770
IG+G G+VY A + G EVA++ N Q + E VM+ ++ NI+ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP 830
+GD + +EY+ GSL + + D Q + + ALE+L +S
Sbjct: 86 YLVGDELWVV----MEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFL---HSNQ 136
Query: 831 VIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVS 890
VIH D+K N+LLG + L+DFG +T E + T +MA E +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG--TPYWMAPEVVTRKAYG 194
Query: 891 TNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQF 950
D+++ G+M +E G+ P + ++ + LS F
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPP-----YLNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249
Query: 951 VAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + C EKR +AKE+
Sbjct: 250 LNR-------------CLDMDVEKRGSAKEL 267
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (394), Expect = 4e-43
Identities = 61/281 (21%), Positives = 109/281 (38%), Gaps = 37/281 (13%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQ---QCGRAFKSFDVECEVMKSIRH 761
+ F +G+G FG+VY AR Q +A+KV + + E E+ +RH
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821
NI+++ L EY P G++ + L + D + + ++A+AL
Sbjct: 66 PNILRLYGYFHDATRVYLIL----EYAPLGTVYRELQKLSK-FDEQRTATYITELANALS 120
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
Y + S VIH D+KP N+LLG ++DFG + + T+ Y+
Sbjct: 121 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG----TLDYLPP 173
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941
E D+++ GV+ E GK P E T + IS ++
Sbjct: 174 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-----FEANTYQETYK---RISRVEFTFPD 225
Query: 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982
++ +++ +P +R +E++
Sbjct: 226 FVTEGARDLISR-------------LLKHNPSQRPMLREVL 253
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 158 bits (400), Expect = 5e-43
Identities = 45/272 (16%), Positives = 90/272 (33%), Gaps = 30/272 (11%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G G FG V++ G A K ++ E + M +RH ++ +
Sbjct: 33 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 92
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ + E+M G L + + + + + + M V L ++ +
Sbjct: 93 EDDNEMVMI----YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HENNY 145
Query: 832 IHCDLKPSNVLLG--DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
+H DLKP N++ + L DFG+T L + T T + A E V
Sbjct: 146 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA---EFAAPEVAEGKPV 202
Query: 890 STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949
D+++ GV+ +G P + + ++ + +
Sbjct: 203 GYYTDMWSVGVLSYILLSGLSP-------------FGGENDDETLRNVKSCDWNMDDSAF 249
Query: 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
E F+ + + P R+ +
Sbjct: 250 SGISEDGKDFI----RKLLLADPNTRMTIHQA 277
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 156 bits (395), Expect = 3e-42
Identities = 47/272 (17%), Positives = 91/272 (33%), Gaps = 30/272 (11%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G G FG V++ G K N + E +M + H +I +
Sbjct: 36 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
L LE++ G L + + +Y + + +N M L+++ + +
Sbjct: 96 EDKYEMVLI----LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM---HEHSI 148
Query: 832 IHCDLKPSNVLL--GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
+H D+KP N++ + DFG+ L ++ T T + A E V
Sbjct: 149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA---EFAAPEIVDREPV 205
Query: 890 STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949
D++ GV+ +G P + + L ++ + ED
Sbjct: 206 GFYTDMWAIGVLGYVLLSGLSP-------------FAGEDDLETLQNVKRCDWEFDEDAF 252
Query: 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ F+ + P KR+ +
Sbjct: 253 SSVSPEAKDFI----KNLLQKEPRKRLTVHDA 280
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (389), Expect = 3e-42
Identities = 61/283 (21%), Positives = 108/283 (38%), Gaps = 33/283 (11%)
Query: 703 QATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCG---RAFKSFDVECEVMKS 758
+ + F ++G G F +V AR + E A+K+ ++ E +VM
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 759 IRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVAS 818
+ H +K+ + L+ L Y +G L KY+ D ++ S
Sbjct: 65 LDHPFFVKLYFTFQDDEK--LY--FGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVS 119
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY 878
ALEYL+ +IH DLKP N+LL ++M ++DFG K+L+ E + T Y
Sbjct: 120 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 176
Query: 879 MALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938
++ E +E + D++ G ++ + G P + + KI+
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-------------FRAGNEYLIFQKII 223
Query: 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
E + V + V KR+ +E+
Sbjct: 224 KLEYDFPEKF----FPKARDLV----EKLLVLDATKRLGCEEM 258
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (389), Expect = 4e-42
Identities = 71/308 (23%), Positives = 122/308 (39%), Gaps = 51/308 (16%)
Query: 706 DGFSENNLIGRGGFGSVYKAR--------IQDGMEVAVKVFNQQCG-RAFKSFDVECEVM 756
D +G G FG V A +VAVK+ + E E+M
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 757 KSI-RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYL---------------YSS 800
K I +H+NII ++ C+ + +EY G+L +YL ++
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVI----VEYASKGNLREYLQARRPPGLEYSYNPSHNP 128
Query: 801 NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860
L ++ VA +EYL S IH DL NVL+ ++ V ++DFG+ + +
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
Query: 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM 920
D + T + +MA E + + DV++FGV+L E FT G+
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS----PYPGV 241
Query: 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKE 980
++ + K++ +E + C + ++ M +C P +R K+
Sbjct: 242 PVEE---------LFKLL------KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 286
Query: 981 IVTRLLKI 988
+V L +I
Sbjct: 287 LVEDLDRI 294
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 2e-40
Identities = 61/305 (20%), Positives = 111/305 (36%), Gaps = 45/305 (14%)
Query: 706 DGFSENNLIGRGGFGSVYKAR------IQDGMEVAVKVFNQQCGRA-FKSFDVECEVMKS 758
D +GRG FG V +A VAVK+ + + ++ E +++
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72
Query: 759 IRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY---------------I 803
I H + + L + +E+ G+L YL S
Sbjct: 73 IGHHLNVVNLLGACTKPGGPLM--VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130
Query: 804 LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863
L + + VA +E+L S IH DL N+LL + V + DFG+ + + ++
Sbjct: 131 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 187
Query: 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLK 923
+V + + +MA E + + DV++FGV+L E F+ G+ +
Sbjct: 188 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS----PYPGVKID 243
Query: 924 HWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVT 983
L +E + A + ++ ++C P +R E+V
Sbjct: 244 EEFCRRL--------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 289
Query: 984 RLLKI 988
L +
Sbjct: 290 HLGNL 294
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (370), Expect = 3e-39
Identities = 52/272 (19%), Positives = 102/272 (37%), Gaps = 31/272 (11%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+GRG FG V++ K + G E ++ RHRNI+ +
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ + E++ + + + +S + L+ + ++ + V AL++L +S +
Sbjct: 71 ESMEELVMIF----EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL---HSHNI 123
Query: 832 IHCDLKPSNVLLG--DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
H D++P N++ + + +FG + L D F P Y A E V
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP---EYYAPEVHQHDVV 180
Query: 890 STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQ 949
ST D+++ G ++ +G P ++ + I I++ E+
Sbjct: 181 STATDMWSLGTLVYVLLSGINP-------------FLAETNQQIIENIMNAEYTFDEEAF 227
Query: 950 FVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ M FV V+ + R+ A E
Sbjct: 228 KEISIEAMDFV----DRLLVKERKSRMTASEA 255
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 140 bits (353), Expect = 3e-37
Identities = 50/279 (17%), Positives = 96/279 (34%), Gaps = 27/279 (9%)
Query: 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAF-KSFDVECEVMKSIRHR 762
D + +++G G F V A + VA+K ++ S + E V+ I+H
Sbjct: 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
NI+ + G L+ L ++ + G L + + ++ V A++Y
Sbjct: 68 NIVALDDIYESGGH--LY--LIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKY 122
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
L+ L ++ +SDFG++K+ T TP GY+A E
Sbjct: 123 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP---GYVAPE 179
Query: 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942
++ S D ++ GV+ G P + ++ +I+
Sbjct: 180 VLAQKPYSKAVDCWSIGVIAYILLCGYPP-------------FYDENDAKLFEQILKAEY 226
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ F+ + PEKR ++
Sbjct: 227 EFDSPYWDDISDSAKDFI----RHLMEKDPEKRFTCEQA 261
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (347), Expect = 2e-36
Identities = 63/296 (21%), Positives = 114/296 (38%), Gaps = 22/296 (7%)
Query: 701 LCQATDGFSENNLIGRGGFGSVYKAR--IQDGMEVAVKVFNQQCGRAFKSFDVECEV--- 755
LC+A + IG G +G V+KAR G VA+K Q G EV
Sbjct: 2 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 61
Query: 756 --MKSIRHRNIIKIISCCSIGDFKALFK-ALALEYMPHGSLEKYLYSSNYILDIFQRLNI 812
+++ H N++++ C++ K L E++ + ++
Sbjct: 62 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 121
Query: 813 MIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQT 872
M + L++L+ S V+H DLKP N+L+ + L+DFG+ ++ + + + T
Sbjct: 122 MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 178
Query: 873 PATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932
Y A E + +T D+++ G + E F K ++ L ++ L
Sbjct: 179 L---WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS-SDVDQLGKILDVIGLP 234
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAME-------CTVESPEKRINAKEI 981
L R+ + + FV ++ C +P KRI+A
Sbjct: 235 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 2e-36
Identities = 49/275 (17%), Positives = 96/275 (34%), Gaps = 30/275 (10%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVM-KSIRHRNIIKIISC 770
++G G G V + + + A+K+ E E+ ++ + +I++I+
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDV 73
Query: 771 CSIGDFKALFKALALEYMPHGSLEKYLYS-SNYILDIFQRLNIMIDVASALEYLYFGYST 829
+ +E + G L + + + IM + A++YL+ S
Sbjct: 74 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SI 130
Query: 830 PVIHCDLKPSNVLL---GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE 886
+ H D+KP N+L N + L+DFG K T + T TP Y+A E
Sbjct: 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP---YYVAPEVLGP 187
Query: 887 GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946
+ + D+++ GV++ G P ++ + + S +S E
Sbjct: 188 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 247
Query: 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ P +R+ E
Sbjct: 248 VKMLIRN-------------LLKTEPTQRMTITEF 269
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 3e-36
Identities = 55/294 (18%), Positives = 110/294 (37%), Gaps = 36/294 (12%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCG---RAFKSFDVECEVM-KSIR 760
+ F + ++G+G FG V+ A + A+K + + VE V+ +
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 761 HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASAL 820
H + + + +EY+ G L ++ S + D+ + ++ L
Sbjct: 62 HPFLTHMFCTFQTKENLFFV----MEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGL 116
Query: 821 EYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMA 880
++L+ S +++ DLK N+LL + ++DFG+ K D T Y+A
Sbjct: 117 QFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNTFCGTPDYIA 171
Query: 881 LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940
E + + + D ++FGV+L E G+ P + +E D
Sbjct: 172 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELFHSIRMDNPFYP------- 223
Query: 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994
L +E + K V PEKR+ + + + ++++
Sbjct: 224 RWLEKEAKDLLVK-------------LFVREPEKRLGVRGDIRQHPLFREINWE 264
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 136 bits (344), Expect = 3e-36
Identities = 58/290 (20%), Positives = 107/290 (36%), Gaps = 39/290 (13%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDV---------ECEV 755
+ + ++GRG V + E AVK+ + G +F + +V E ++
Sbjct: 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62
Query: 756 MKSIR-HRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMI 814
++ + H NII++ F L + M G L YL + L + IM
Sbjct: 63 LRKVSGHPNIIQLKDTYE--TNTFFF--LVFDLMKKGELFDYL-TEKVTLSEKETRKIMR 117
Query: 815 DVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPA 874
+ + L+ ++H DLKP N+LL D+M L+DFG + L ++ TP+
Sbjct: 118 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 174
Query: 875 TIG---YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931
+ + D+++ GV++ G P + + +
Sbjct: 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP-------------FWHRKQM 221
Query: 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + I+ G+ + V V P+KR A+E
Sbjct: 222 LMLRMIMSGNYQFGSPEWDDYSDTVKDLV----SRFLVVQPQKRYTAEEA 267
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 3e-36
Identities = 57/289 (19%), Positives = 108/289 (37%), Gaps = 25/289 (8%)
Query: 708 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK 766
+++ +IG G FG VY+A+ G VA+K Q + + E ++M+ + H NI++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVR 77
Query: 767 IISCC--SIGDFKALFKALALEYMPHGSLE--KYLYSSNYILDIFQRLNIMIDVASALEY 822
+ S ++ L L+Y+P ++ + L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 823 LYFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
+ +S + H D+KP N+LL D V L DFG K L R + V+ +
Sbjct: 138 I---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--YYRAPE 192
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKP---------TNEIFNEGMTLKHWVNDWLLI 932
+++ DV++ G +L E G+ EI T +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + + + + + + +P R+ E
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAI-ALCSRLLEYTPTARLTPLEA 300
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (346), Expect = 5e-36
Identities = 57/291 (19%), Positives = 111/291 (38%), Gaps = 19/291 (6%)
Query: 705 TDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAF-KSFDVECEVMKSIRHR 762
++ + IG G +G V A + + VA+K + + + + E +++ RH
Sbjct: 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
NII I + + + ++ L K L + + L + + L+Y
Sbjct: 67 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQILRGLKY 124
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT-REDQFVTQTQTPATIGYMAL 881
++ S V+H DLKPSN+LL + DFG+ ++ D T+ AT Y A
Sbjct: 125 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 181
Query: 882 EYGSEGRVSTN-GDVYNFGVMLMETFTGKKP-----TNEIFNEGMTLKHWVN--DWLLIS 933
E + T D+++ G +L E + + + N + + + D I
Sbjct: 182 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 241
Query: 934 IMKIVDGSLLSREDIQFVAKEQCMSF---VFNMAMECTVESPEKRINAKEI 981
+K + L + + ++ + +P KRI ++
Sbjct: 242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 134 bits (338), Expect = 1e-35
Identities = 48/280 (17%), Positives = 102/280 (36%), Gaps = 19/280 (6%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFN--QQCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G +G VYKA+ G A+K ++ + E ++K ++H NI+K+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
L L+K L L+ + ++ + + + Y +
Sbjct: 68 VIHTKKRLVLV-----FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DR 119
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
V+H DLKP N+L+ ++DFG+ + + + +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-YTHEIVTLWYRAPDVLMGSKKY 178
Query: 890 STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHW-------VNDWLLISIMKIVDGSL 942
ST D+++ G + E G + ++ + +W ++ + D +
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 943 LSREDIQFVAKEQCMSFVF-NMAMECTVESPEKRINAKEI 981
E + + + + + ++ + P +RI AK+
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 131 bits (331), Expect = 3e-34
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKI 767
+G G FG V+ R +G A+KV ++ + + + E ++ + H II++
Sbjct: 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 69
Query: 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ +Y+ G L + +V ALEYL+
Sbjct: 70 WGTFQDAQQIFMIM----DYIE-GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH--- 121
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG 887
S +I+ DLKP N+LL N ++DFG K + D T TP Y+A E S
Sbjct: 122 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV--PDVTYTLCGTP---DYIAPEVVSTK 176
Query: 888 RVSTNGDVYNFGVMLMETFTGKKP 911
+ + D ++FG+++ E G P
Sbjct: 177 PYNKSIDWWSFGILIYEMLAGYTP 200
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 132 bits (334), Expect = 3e-34
Identities = 59/301 (19%), Positives = 114/301 (37%), Gaps = 42/301 (13%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN------QQCGRAFKSFDVECEVMKS 758
+ FS + +IGRGGFG VY R G A+K + +Q + + ++ +
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 759 IRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVAS 818
I+ + D + L+ M G L +L S + + ++
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSF----ILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIIL 118
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGY 878
LE+++ + V++ DLKP+N+LL ++ +SD G+ +++ + T GY
Sbjct: 119 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGY 171
Query: 879 MALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937
MA E +G ++ D ++ G ML + G P + + H ++ L +++
Sbjct: 172 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMAVEL 228
Query: 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK----INDLDF 993
D S E + +R+ + +K LD+
Sbjct: 229 PDS--FSPELRSLLEG-------------LLQRDVNRRLGCLGRGAQEVKESPFFRSLDW 273
Query: 994 N 994
Sbjct: 274 Q 274
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (328), Expect = 4e-34
Identities = 60/290 (20%), Positives = 103/290 (35%), Gaps = 25/290 (8%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHR 762
+ F + IG G +G VYKAR G VA+K + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEY 822
NI+K++ + L E++ + S+ + + + + + L +
Sbjct: 62 NIVKLLDVIHTENKLYLVF----EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 823 LYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
+ S V+H DLKP N+L+ L+DFG+ + + T + Y A E
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT--LWYRAPE 172
Query: 883 -YGSEGRVSTNGDVYNFGVMLMETFTGKKP---------TNEIFNEGMTLKHWVNDWLLI 932
ST D+++ G + E T + IF T W +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE--VVWPGV 230
Query: 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVF-NMAMECTVESPEKRINAKEI 981
+ M S F + ++ + P KRI+AK
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 129 bits (326), Expect = 9e-34
Identities = 51/285 (17%), Positives = 92/285 (32%), Gaps = 31/285 (10%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
IG G FG +Y I G EVA+K+ + +E ++ K ++ I I C
Sbjct: 14 KIGSGSFGDIYLGTDIAAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWC 71
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ + +E + SLE + + L + + S +EY++ S
Sbjct: 72 GAEGDYNV---MVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNF 124
Query: 832 IHCDLKPSNVL---LGDNMVAHLSDFGITKLLTRED-----QFVTQTQTPATIGYMALEY 883
IH D+KP N L + ++ DFG+ K + T Y ++
Sbjct: 125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT 184
Query: 884 GSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943
S D+ + G +LM G P + K+ +S V
Sbjct: 185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY 244
Query: 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
E ++ C + + + + +
Sbjct: 245 PSEFATYLNF-------------CRSLRFDDKPDYSYLRQLFRNL 276
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 1e-33
Identities = 60/288 (20%), Positives = 104/288 (36%), Gaps = 32/288 (11%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFN-----QQCGRAFKSFDVECEVMKSIRHRNII 765
+ +G G F +VYKAR VA+K + ++ E ++++ + H NII
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF 825
++ +L ++M + ++ +L M+ LEYL+
Sbjct: 64 GLLDAFGHKSNISLV----FDFMETDLE-VIIKDNSLVLTPSHIKAYMLMTLQGLEYLH- 117
Query: 826 GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS 885
++H DLKP+N+LL +N V L+DFG+ K T T Y A E
Sbjct: 118 --QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYTHQVVTRWYRAPELLF 173
Query: 886 EGRV-STNGDVYNFGVMLMETFTGKKP---------TNEIFNEGMT--LKHWVNDWLLIS 933
R+ D++ G +L E IF T + W + L
Sbjct: 174 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 233
Query: 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + I A + + + + +P RI A +
Sbjct: 234 YVTFKSFPGIPLHHIFSAAGDDLLDLI----QGLFLFNPCARITATQA 277
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 5e-33
Identities = 52/287 (18%), Positives = 105/287 (36%), Gaps = 39/287 (13%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN------QQCGRAFKSFDVECEVMKS 758
D + +G G F V K R G++ A K + G + + + E ++K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 759 IRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVAS 818
I+H N+I + L LE + G L + + L + + + +
Sbjct: 70 IQHPNVITLHEVYENKTDVILI----LELVAGGELFDF-LAEKESLTEEEATEFLKQILN 124
Query: 819 ALEYLYFGYSTPVIHCDLKPSNVLLGDNMVA----HLSDFGITKLLTREDQFVTQTQTPA 874
+ Y +S + H DLKP N++L D V + DFG+ + ++F
Sbjct: 125 GVYY---LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 178
Query: 875 TIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934
T ++A E + + D+++ GV+ +G P ++ D ++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-------------FLGDTKQETL 225
Query: 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ + ++ F+ V+ P+KR+ ++
Sbjct: 226 ANVSAVNYEFEDEYFSNTSALAKDFI----RRLLVKDPKKRMTIQDS 268
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 1e-32
Identities = 55/280 (19%), Positives = 94/280 (33%), Gaps = 49/280 (17%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAF------KSFDVECEVMKSIR--HRN 763
L+G GGFGSVY + D + VA+K + + +E ++K +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 764 IIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYL 823
+I+++ D L LE + L + V A+ +
Sbjct: 71 VIRLLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 824 YFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882
+ + V+H D+K N+L+ + L DFG LL T T Y E
Sbjct: 127 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPE 179
Query: 883 YGSEGRVSTNG-DVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941
+ R V++ G++L + G P F +I+ G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDE---------------EIIRGQ 220
Query: 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
+ R+ + +C + C P R +EI
Sbjct: 221 VFFRQRV----SSECQHLI----RWCLALRPSDRPTFEEI 252
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 2e-32
Identities = 54/302 (17%), Positives = 111/302 (36%), Gaps = 25/302 (8%)
Query: 701 LCQATDGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFN--QQCGRAFKSFDVECEVMK 757
C + + IG+G FG V+KAR + G +VA+K + + E ++++
Sbjct: 5 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 64
Query: 758 SIRHRNIIKIISCCSIGDFKALFKA----LALEYMPHGSLEKYLYSSNYILDIFQRLNIM 813
++H N++ +I C L ++ H + + +M
Sbjct: 65 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVM 123
Query: 814 IDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT--REDQFVTQTQ 871
+ + L Y++ ++H D+K +NVL+ + V L+DFG+ + + + Q T
Sbjct: 124 QMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTN 180
Query: 872 TPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM---------- 920
T+ Y E R D++ G ++ E +T +
Sbjct: 181 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 240
Query: 921 -TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAK 979
T + W N K+ R+ + + ++ + V P +RI++
Sbjct: 241 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 300
Query: 980 EI 981
+
Sbjct: 301 DA 302
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (308), Expect = 1e-31
Identities = 54/283 (19%), Positives = 104/283 (36%), Gaps = 23/283 (8%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKII 768
IG G +G+V+KA+ + VA+K S E ++K ++H+NI+++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS 828
L L+KY S N LD + + + L + +
Sbjct: 68 DVLHSDKKLTLV-----FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS--- 119
Query: 829 TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE-YGSEG 887
V+H DLKP N+L+ N L++FG+ + + + T+ Y +
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAK 177
Query: 888 RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN--------DWLLISIMKIVD 939
ST+ D+++ G + E +P + LK W ++ +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
Query: 940 GSLLSREDIQFVAKEQCMSFVF-NMAMECTVESPEKRINAKEI 981
+ V ++ ++ +P +RI+A+E
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 9e-31
Identities = 49/210 (23%), Positives = 83/210 (39%), Gaps = 14/210 (6%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRA---FKSFDVECEVMKSIRH 761
+ F L+G+G FG V R G A+K+ ++ A E V+++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821
+ + D EY G L +L S + + ++ SALE
Sbjct: 65 PFLTALKYAFQTHDRLCFVM----EYANGGELFFHL-SRERVFTEERARFYGAEIVSALE 119
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
Y +S V++ D+K N++L + ++DFG+ K + T T Y+A
Sbjct: 120 Y---LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAP 174
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
E + D + GV++ E G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 119 bits (300), Expect = 2e-30
Identities = 37/289 (12%), Positives = 89/289 (30%), Gaps = 37/289 (12%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
IG G FG +++ + + +VA+K ++ E K + I +
Sbjct: 12 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYF 69
Query: 772 SIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPV 831
+ + + SLE L + + + ++ ++ +
Sbjct: 70 GQEGLHNVL----VIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSL 122
Query: 832 IHCDLKPSNVLLGDNMVAH-----LSDFGITKLL----TREDQFVTQTQTPA-TIGYMAL 881
++ D+KP N L+G + + DFG+ K T++ + + + T YM++
Sbjct: 123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 182
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGK--KPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939
S D+ G + M G + + + ++
Sbjct: 183 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA 242
Query: 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988
G E +++ + + + + + K+
Sbjct: 243 G--FPEEFYKYM--HYARNL-----------AFDATPDYDYLQGLFSKV 276
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (301), Expect = 4e-30
Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 21/282 (7%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQ--QCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
+G G +G+V A + G +VA+K + Q K E ++K +RH N+I ++
Sbjct: 25 PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 84
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
+ + F L G+ L L + ++ + L Y+ ++
Sbjct: 85 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK-LGEDRIQFLVYQMLKGLRYI---HAA 140
Query: 830 PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV 889
+IH DLKP N+ + ++ + DFG+ + E + R
Sbjct: 141 GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRY 196
Query: 890 STNGDVYNFGVMLMETFTGKKP---------TNEIFNEGMTLKHWVNDWLLISIMKIVDG 940
+ D+++ G ++ E TGK EI T L K
Sbjct: 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256
Query: 941 SLLSREDIQFVAKEQCMSFVF-NMAMECTVESPEKRINAKEI 981
L E F + S + N+ + V E+R+ A E
Sbjct: 257 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 1e-28
Identities = 57/303 (18%), Positives = 106/303 (34%), Gaps = 25/303 (8%)
Query: 696 FSYLELCQATDGFSEN----NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQ--QCGRAFKS 748
F EL + E + +G G +GSV A + G+ VAVK ++ Q K
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 63
Query: 749 FDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQ 808
E ++K ++H N+I ++ + F + L G+ + L
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDH 122
Query: 809 RLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVT 868
++ + L+Y+ +S +IH DLKPSN+ + ++ + DFG L R
Sbjct: 123 VQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEM 175
Query: 869 QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP---------TNEIFNEG 919
+ + D+++ G ++ E TG+ I
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 920 MTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMS-FVFNMAMECTVESPEKRINA 978
T + + + SL + F + ++ + V +KRI A
Sbjct: 236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 979 KEI 981
+
Sbjct: 296 AQA 298
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (285), Expect = 4e-28
Identities = 61/291 (20%), Positives = 105/291 (36%), Gaps = 40/291 (13%)
Query: 706 DGFSENNLIGRGGFGSVYKAR----IQDGMEVAVKVFNQ----QCGRAFKSFDVECEVMK 757
+ F ++G G +G V+ R G A+KV + Q + + E +V++
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 758 SIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVA 817
IR + + + K L+Y+ G L +L F + I V
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLI---LDYINGGELFTHLSQRER----FTEHEVQIYVG 136
Query: 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIG 877
+ L + +I+ D+K N+LL N L+DFG++K ++ TI
Sbjct: 137 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY-DFCGTIE 195
Query: 878 YMALE--YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935
YMA + G + D ++ GV++ E TG P + D S
Sbjct: 196 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP-------------FTVDGEKNSQA 242
Query: 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEI 981
+I L S + ++ P+KR+ +A EI
Sbjct: 243 EISRRILKSEPPYPQEMSALAKDLI----QRLLMKDPKKRLGCGPRDADEI 289
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 113 bits (284), Expect = 5e-28
Identities = 46/295 (15%), Positives = 110/295 (37%), Gaps = 44/295 (14%)
Query: 712 NLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIIS 769
+GRG + V++A I + +V VK+ + K E ++++++R NII +
Sbjct: 41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKR---EIKILENLRGGPNIITLAD 97
Query: 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST 829
+ L E++ + ++ + L + M ++ AL+Y +S
Sbjct: 98 IVKDPVSRTPA--LVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC---HSM 148
Query: 830 PVIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR 888
++H D+KP NV++ ++ L D+G+ + ++ + + + E + +
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR---YFKGPELLVDYQ 205
Query: 889 -VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKH--------WVNDWL--------- 930
+ D+++ G ML K+P + L + D++
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 265
Query: 931 ----LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEI 981
++ + Q + + + F+ + + R+ A+E
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFL----DKLLRYDHQSRLTAREA 316
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 113 bits (284), Expect = 8e-28
Identities = 41/210 (19%), Positives = 75/210 (35%), Gaps = 17/210 (8%)
Query: 706 DGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRH 761
D F +G G FG V + + G A+K+ ++Q + + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821
++K+ + EY+ G + +L + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVM----EYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFE 155
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881
YL+ S +I+ DLKP N+L+ ++DFG K T +A
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEALAP 207
Query: 882 EYGSEGRVSTNGDVYNFGVMLMETFTGKKP 911
E + D + GV++ E G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 112 bits (279), Expect = 3e-27
Identities = 48/309 (15%), Positives = 100/309 (32%), Gaps = 43/309 (13%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCC 771
+G G F +V+ A+ + + VA+K+ ++ + E ++++ + + K S
Sbjct: 20 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT-EAAEDEIKLLQRVNDADNTKEDSMG 78
Query: 772 SIGDFKAL-----------FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASAL 820
+ K L + E + L + + + I + L
Sbjct: 79 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138
Query: 821 EYLYFGYSTPVIHCDLKPSNVLL-GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYM 879
+Y++ +IH D+KP NVL+ + +L I L T + T Y
Sbjct: 139 DYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 196
Query: 880 ALEYGSEGRVSTNGDVYNFGVMLMETFTGKKP---------------------------T 912
+ E D+++ ++ E TG +
Sbjct: 197 SPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPS 256
Query: 913 NEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESP 972
+ N T + + LL +I K+ L ++ + + + P
Sbjct: 257 YLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDP 316
Query: 973 EKRINAKEI 981
KR +A +
Sbjct: 317 RKRADAGGL 325
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 108 bits (269), Expect = 1e-25
Identities = 75/387 (19%), Positives = 134/387 (34%), Gaps = 29/387 (7%)
Query: 221 NLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLW 280
L LG + + ++ + + + S+ + Y L NL ++
Sbjct: 20 ALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SIDGVEY--LNNLTQINFS 74
Query: 281 GNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340
N + P + N +KL + + N + P L N L+
Sbjct: 75 NNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 132
Query: 341 FLSSLSNCK------YLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEE 394
L+ L S + + L++ + + + S
Sbjct: 133 NLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV 192
Query: 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDL 454
+ LTNL N ++ P+ + L L N+L+ + L + LDL
Sbjct: 193 LAKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKD--IGTLASLTNLTDLDL 248
Query: 455 SNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLE 514
+NN++S P L L L L +N++ ++ P L + L L+ N
Sbjct: 249 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN--QLEDISP 302
Query: 515 IGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNL 574
I NLK L + NN S + P + + LQ LF N + S +L ++ L+
Sbjct: 303 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSA 358
Query: 575 SNNNLSGSIPVSLEKLSYLKDLNLSFN 601
+N +S P L L+ + L L+
Sbjct: 359 GHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 83.5 bits (205), Expect = 2e-17
Identities = 71/384 (18%), Positives = 131/384 (34%), Gaps = 51/384 (13%)
Query: 30 FAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQF 89
A+ + + N T +VT L L + +I + L++L + +NQ
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQL 78
Query: 90 SGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNC 149
+ P N+ L + +NQ++ P +NL N N
Sbjct: 79 TDITPLK--NLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 136
Query: 150 TYL---RILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQF 206
L I +S + + + L+ D ++ ++ +
Sbjct: 137 LELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKL 196
Query: 207 SHNFSKCEIPNEIGNL------RNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260
++ S N+I ++ NL+ L+L N+L + +++ + + L NN +S
Sbjct: 197 TNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQIS 254
Query: 261 GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASK--------------------LSR 300
P L L EL L N S P A L+
Sbjct: 255 NL---APLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTY 311
Query: 301 LELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNS 360
L L N+ S P +L L+RL NN ++ + SSL+N + ++ N
Sbjct: 312 LTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV-------SSLANLTNINWLSAGHNQ 362
Query: 361 IDGILSRKSVGNLSHSLKIFDMSD 384
I + + NL+ + ++D
Sbjct: 363 ISDLT---PLANLTR-ITQLGLND 382
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 76.2 bits (186), Expect = 3e-15
Identities = 54/262 (20%), Positives = 86/262 (32%), Gaps = 72/262 (27%)
Query: 98 FNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRL 157
+ L+ L +NQ+S P I +NL + L+L+ N L++ T L L L
Sbjct: 194 AKLTNLESLIATNNQISDITPLGILTNL---DELSLNGNQLKD--IGTLASLTNLTDLDL 248
Query: 158 SYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPN 217
+ N + P + LTKL EL L N + L N ++ E +
Sbjct: 249 ANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALT-----NLELNENQLEDIS 301
Query: 218 EIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277
I NL+NL L L N + + P L L+ L
Sbjct: 302 PISNLKNLTYLTLYFNNISDISPVS---------------------------SLTKLQRL 334
Query: 278 YLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTL 337
+ N S S+ NL N+ L +N ++ L
Sbjct: 335 FFANNKVSD--------------------------VSSLANLTNINWLSAGHNQISDL-- 366
Query: 338 ELSFLSSLSNCKYLEFIDLSSN 359
+ L+N + + L+
Sbjct: 367 -----TPLANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 58.1 bits (139), Expect = 2e-09
Identities = 46/265 (17%), Positives = 85/265 (32%), Gaps = 23/265 (8%)
Query: 355 DLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGS 414
L ++ +S+ + ++ + SI + + L NL N L
Sbjct: 28 VLGKTNVTDTVSQTDLDQVTT----LQADRLGIK-SI-DGVEYLNNLTQINFSNNQLTDI 81
Query: 415 IPIT-LGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
P+ L KL + + + ++ +++ ++ S
Sbjct: 82 TPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSS 141
Query: 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGN----------LKVLVK 523
+S S + L +N T N L L
Sbjct: 142 NTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLES 201
Query: 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583
+ + N S + P I + +L L L N L+ + L +L L+L+NN +S
Sbjct: 202 LIATNNQISDITPLGI--LTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA 257
Query: 584 PVSLEKLSYLKDLNLSFNKLEGEIP 608
P L L+ L +L L N++ P
Sbjct: 258 P--LSGLTKLTELKLGANQISNISP 280
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 53.9 bits (128), Expect = 6e-08
Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 31/135 (22%)
Query: 26 PTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLH 85
P N ++ ++ + +T L + ++S P + +L+ LQ LF
Sbjct: 280 PLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFA 337
Query: 86 SNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSA 145
+N+ S S+ N+ + LS G NQ+S P
Sbjct: 338 NNKVSD--VSSLANLTNINWLSAGHNQISDLTP--------------------------- 368
Query: 146 LSNCTYLRILRLSYN 160
L+N T + L L+
Sbjct: 369 LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 44.2 bits (103), Expect = 6e-05
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 439 IPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498
D LA+ + L ++ ++ DL + L + S+ L ++
Sbjct: 16 FTDTA--LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLT 69
Query: 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531
+N S+N LT PL NL LV I + N
Sbjct: 70 QINFSNNQLTDITPL--KNLTKLVDILMNNNQI 100
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 41.1 bits (95), Expect = 6e-04
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
Query: 502 LSSNSLTGPLPLEI----GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG 557
L S ++T P+ L +K N + + + + L + ++
Sbjct: 1 LGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK- 57
Query: 558 SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFN 601
SI D L +L +N SNN L+ P L+ L+ L D+ ++ N
Sbjct: 58 SI-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN 98
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 1e-25
Identities = 54/287 (18%), Positives = 110/287 (38%), Gaps = 22/287 (7%)
Query: 713 LIGRGGFGSVYKAR-IQDGMEVAVKVFNQ--QCGRAFKSFDVECEVMKSIRHRNIIKIIS 769
IG G G V A VA+K ++ Q K E +MK + H+NII +++
Sbjct: 24 PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83
Query: 770 CCSIGDFKALFKALAL--EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY 827
+ F+ + L E M + D + ++ + +++L+
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL----DHERMSYLLYQMLCGIKHLH--- 136
Query: 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG 887
S +IH DLKPSN+++ + + DFG+ + T T Y A E
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGM 193
Query: 888 RVSTNGDVYNFGVMLMETFTGKKP-----TNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942
N D+++ G ++ E K + +N+ + + + V +
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253
Query: 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989
+R ++ F ++ + + K A+++++++L I+
Sbjct: 254 ENR--PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 103 bits (256), Expect = 1e-24
Identities = 59/317 (18%), Positives = 101/317 (31%), Gaps = 32/317 (10%)
Query: 260 SGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNL 319
L+ +P P+ L L N + N L L L N S P F L
Sbjct: 19 DLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPL 78
Query: 320 RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKI 379
L+RL L+ N L L ++ K L+ + + N I + G +
Sbjct: 79 VKLERLYLSKNQLKELPEKM--------PKTLQELRVHENEITKVRKSVFNGLNQMIVVE 130
Query: 380 FDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSI 439
+ SG + L + N+ I G L L+ NK+
Sbjct: 131 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT---TIPQGLPPSLTELHLDGNKITKVD 187
Query: 440 PDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILY 499
+ L + +L LS N +S + LR L +N + +P + K I
Sbjct: 188 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH-LNNNKLVKVPGGLADHKYIQV 246
Query: 500 LNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGS- 558
+ L +N+++ ++ + P + L N +Q
Sbjct: 247 VYLHNNNIS------------------AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWE 288
Query: 559 -IPDSFGDLMSLKSLNL 574
P +F + ++ L
Sbjct: 289 IQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 95.9 bits (237), Expect = 4e-22
Identities = 60/283 (21%), Positives = 102/283 (36%), Gaps = 21/283 (7%)
Query: 328 NNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNV 387
++ L + +L +DL +N I I NL + L + + +
Sbjct: 18 SDLGLEKVPKDLP--------PDTALLDLQNNKITEIKDG-DFKNLKN-LHTLILINNKI 67
Query: 388 SGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLA 447
S P L L YL N L LQ+L+V K+ S+ +
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNG-LNQM 126
Query: 448 KVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507
V +L + K SG F + L + +A + ++ +L L+L N +
Sbjct: 127 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLT---ELHLDGNKI 183
Query: 508 TGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM 567
T + L L K+ S N+ S V ++ L+ L L N L +P D
Sbjct: 184 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 242
Query: 568 SLKSLNLSNNNLSG------SIPVSLEKLSYLKDLNLSFNKLE 604
++ + L NNN+S P K + ++L N ++
Sbjct: 243 YIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 91.3 bits (225), Expect = 2e-20
Identities = 49/272 (18%), Positives = 95/272 (34%), Gaps = 37/272 (13%)
Query: 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175
++P ++ + L+L N N L L L N + P L K
Sbjct: 24 KVPKDLPPDT---ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVK 80
Query: 176 LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLAL--GLN 233
LE LYLS N L+ + + ++ N + L + V+ L
Sbjct: 81 LERLYLSKNQLKELPEK----MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 136
Query: 234 KLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293
K G+ M + + + + +++ +IP P+L EL+L GN + +
Sbjct: 137 KSSGIENGAFQGMKKLSYIRIADTNIT----TIPQGLPPSLTELHLDGNKITKVDAASLK 192
Query: 294 NASKLSRLELQKNSFSG-----------------------FIPSTFGNLRNLKRLGLNNN 330
+ L++L L NS S +P + + ++ + L+NN
Sbjct: 193 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNN 252
Query: 331 HLTSLTLE-LSFLSSLSNCKYLEFIDLSSNSI 361
+++++ + + L SN +
Sbjct: 253 NISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 85.5 bits (210), Expect = 1e-18
Identities = 51/304 (16%), Positives = 95/304 (31%), Gaps = 25/304 (8%)
Query: 41 CNWTGVTCDVHSHR---------VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSG 91
C+ V C L++ + ++ NL +L +L L +N+ S
Sbjct: 10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 69
Query: 92 SIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTY 151
P + + L+ L NQL E+P + L + + L+
Sbjct: 70 ISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIV 128
Query: 152 LRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFS 211
+ L + +G + KL + ++ + + + N
Sbjct: 129 V-ELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG----LPPSLTELHLDGNKI 183
Query: 212 KCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRL 271
+ L NL L L N + V + N ++ + L NN L
Sbjct: 184 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGG--LADH 241
Query: 272 PNLEELYLWGNHFSG------SIPNFIFNASKLSRLELQKN--SFSGFIPSTFGNLRNLK 323
++ +YL N+ S P + + S + L N + PSTF +
Sbjct: 242 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRA 301
Query: 324 RLGL 327
+ L
Sbjct: 302 AVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 76.2 bits (186), Expect = 2e-15
Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 6/219 (2%)
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
+P L +L +NK+ + L ++ L L NNK+S P F L L
Sbjct: 24 KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533
L L+ N+L + L+++ + + N ++V++ + SG
Sbjct: 82 ERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSV-FNGLNQMIVVELGTNPLKSSG 140
Query: 534 VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYL 593
+ A G+K L ++ + + +IP SL L+L N ++ SL+ L+ L
Sbjct: 141 IENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNL 197
Query: 594 KDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPN 632
L LSFN + + E N L P
Sbjct: 198 AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG 236
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 54.7 bits (130), Expect = 2e-08
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 11/152 (7%)
Query: 466 CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKID 525
C + +L L +P D L+L +N +T + NLK L +
Sbjct: 10 CHLRVVQCSDLGLEK------VPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLI 61
Query: 526 FSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPV 585
N S + P A + L+ L+L N L+ +P+ + + L + N ++
Sbjct: 62 LINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTL--QELRVHENEITKVRKS 118
Query: 586 SLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFS 617
L+ + + L N L+ + G+F
Sbjct: 119 VFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 150
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 53.1 bits (126), Expect = 7e-08
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 5/136 (3%)
Query: 500 LNLSSNSLTGPLPLEIG-NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGS 558
+ S L +P ++ + +L D N + + +K+L L L N +
Sbjct: 15 VQCSDLGLEK-VPKDLPPDTALL---DLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 70
Query: 559 IPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSA 618
P +F L+ L+ L LS N L + L L+ K+ + G +
Sbjct: 71 SPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE 130
Query: 619 ESFEGNKLLCGSPNLH 634
K
Sbjct: 131 LGTNPLKSSGIENGAF 146
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 98.3 bits (243), Expect = 9e-23
Identities = 67/269 (24%), Positives = 108/269 (40%), Gaps = 29/269 (10%)
Query: 396 GNLTNLIGFYLGGNNLNGSIPI--TLGKLQKLQVLYFPDN-KLEGSIPDEVCRLAKVYQL 452
+ L G NL PI +L L L LY L G IP + +L +++ L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 453 DLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLP 512
+++ +SG+IP + +L L + N L +P + +L +++ + N ++G +P
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 513 LEIGNLKVLVKIDFSMNN-----------------------FSGVIPNAIGGIKDLQFLF 549
G+ L N + + G
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 550 LEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609
G +L L+L NN + G++P L +L +L LN+SFN L GEIP+
Sbjct: 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Query: 610 GGSFGNFSAESFEGNKLLCGSPNLHVPPC 638
GG+ F ++ NK LCGSP +P C
Sbjct: 287 GGNLQRFDVSAYANNKCLCGSP---LPAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 92.1 bits (227), Expect = 8e-21
Identities = 68/356 (19%), Positives = 109/356 (30%), Gaps = 66/356 (18%)
Query: 10 TDLDALHALKTHITNDPTNFFAKNWNSSISFCN--WTGVTCD--VHSHRVTALNISHLSL 65
D AL +K + +PT +W + CN W GV CD ++RV L++S L+L
Sbjct: 6 QDKQALLQIKKDL-GNPTTL--SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 66 SG--TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICS 123
IPS L NL L L++ T
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLT--------------------- 101
Query: 124 NLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSF 183
L ++ G IP LS L L SYN +G +P I +L L +
Sbjct: 102 ---QLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158
Query: 184 NGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEI 243
N + GA + + S N +IP NL V
Sbjct: 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD--------------- 203
Query: 244 FNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLEL 303
+ + + + + + L+ L+L
Sbjct: 204 ------------LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDL 251
Query: 304 QKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359
+ N G +P L+ L L ++ N+L + N + + ++N
Sbjct: 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE------IPQGGNLQRFDVSAYANN 301
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 61.3 bits (147), Expect = 2e-10
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Query: 40 FCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFN 99
+ S + L++ + + GT+P L L L SL + N G IP N
Sbjct: 231 NSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGN 289
Query: 100 IHTLKLLSFGDNQLSGEIPTNICS 123
+ + ++ +N+ P C+
Sbjct: 290 LQRFDVSAYANNKCLCGSPLPACT 313
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 57.1 bits (136), Expect = 3e-09
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 84 LHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIP 143
L +N+ G++P + + L L+ N L GEIP NL F+ + N G P
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ--GGNLQRFDVSAYANNKCLCGSP 308
Query: 144 SALSNCT 150
L CT
Sbjct: 309 --LPACT 313
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 86.0 bits (212), Expect = 1e-19
Identities = 24/163 (14%), Positives = 50/163 (30%), Gaps = 22/163 (13%)
Query: 712 NLIGRGGFGSVYKARIQDGMEVAVKVFN----------QQCGRAFKSFDVECEVMKSIRH 761
L+G G +V+ + E VK ++ F V
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821
R + K+ + A+ +E + Y + + ++ + +
Sbjct: 66 RALQKLQGLAVPKVYAWEGNAVLMELIDAK--------ELYRVRVENPDEVLDMILEEVA 117
Query: 822 YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864
Y ++H DL NVL+ + + + DF + + E
Sbjct: 118 KF---YHRGIVHGDLSQYNVLVSEEGI-WIIDFPQSVEVGEEG 156
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.6 bits (215), Expect = 2e-19
Identities = 57/278 (20%), Positives = 93/278 (33%), Gaps = 13/278 (4%)
Query: 328 NNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNV 387
L ++ + + + I L N I + S + ++ S+
Sbjct: 19 PQQGLQAVPVGIP--------AASQRIFLHGNRISHV-PAASFRACRNLTILWLHSNVLA 69
Query: 388 SGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLA 447
G L P T L +L L+ L+ P LA
Sbjct: 70 RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLA 129
Query: 448 KVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507
+ L L +N L F DL +L +L L N + SV F L + L L N +
Sbjct: 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189
Query: 508 TGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM 567
P +L L+ + NN S + A+ ++ LQ+L L N +
Sbjct: 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC-RARPLWA 248
Query: 568 SLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEG 605
L+ S++ + S+P L L+ N L+G
Sbjct: 249 WLQKFRGSSSEVPCSLPQRLAGRDL---KRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.3 bits (191), Expect = 2e-16
Identities = 57/272 (20%), Positives = 94/272 (34%), Gaps = 14/272 (5%)
Query: 142 IPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKN 201
+P + + + L N + L L+L N L F + +
Sbjct: 26 VPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 202 IFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSG 261
+ + P L L L L L + P ++ +Q + LQ+N+L
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
Query: 262 SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRN 321
NL L+L GN S L RL L +N + P F +L
Sbjct: 144 LPDDTFRDL-GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 322 LKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFD 381
L L L N+L++L +L+ + L+++ L+ N + L L+ F
Sbjct: 203 LMTLYLFANNLSAL-----PTEALAPLRALQYLRLNDNPWVCDCRARP---LWAWLQKFR 254
Query: 382 MSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
S V S+P+ + L N+L G
Sbjct: 255 GSSSEVPCSLPQRLAGRDLK---RLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.9 bits (190), Expect = 3e-16
Identities = 51/286 (17%), Positives = 84/286 (29%), Gaps = 9/286 (3%)
Query: 48 CDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLS 107
C ++ + L +P + ++ Q +FLH N+ S S L +L
Sbjct: 6 CVCYNEPKVTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILW 62
Query: 108 FGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIP 167
N L+ + P+ L L L P
Sbjct: 63 LHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP 122
Query: 168 KEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEV 227
L L+ LYL N LQ + + N L +L+
Sbjct: 123 GLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDR 181
Query: 228 LALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGS 287
L L N++ V P ++ + + L N+LS +L + L L+ L L N +
Sbjct: 182 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPWVCD 240
Query: 288 IPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333
+ L + + +P L L N L
Sbjct: 241 CRARPL-WAWLQKFRGSSSEVPCSLPQ---RLAGRDLKRLAANDLQ 282
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (186), Expect = 1e-15
Identities = 59/270 (21%), Positives = 96/270 (35%), Gaps = 12/270 (4%)
Query: 312 IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371
+P +R+ L+ N ++ + S C+ L + L SN + I + G
Sbjct: 26 VPVGIP--AASQRIFLHGNRISHVPAA-----SFRACRNLTILWLHSNVLARIDAAAFTG 78
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431
++ + + P L L +L L P L LQ LY
Sbjct: 79 LALLE-QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 137
Query: 432 DNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTF 491
DN L+ D L + L L N++S F L SL L L N + V P F
Sbjct: 138 DNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 197
Query: 492 WNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLE 551
+L ++ L L +N+L+ + L+ L + + N + A LQ
Sbjct: 198 RDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC-DCRARPLWAWLQKFRGS 256
Query: 552 YNILQGSIPDSFGDLMSLKSLNLSNNNLSG 581
+ + S+P L+ N+L G
Sbjct: 257 SSEVPCSLPQRLAG---RDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (186), Expect = 1e-15
Identities = 66/251 (26%), Positives = 95/251 (37%), Gaps = 5/251 (1%)
Query: 384 DCNVSG--SIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPD 441
C G ++P I +L GN ++ + + L +L+ N L
Sbjct: 17 SCPQQGLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAA 74
Query: 442 EVCRLAKVYQLDLSNNKLSGSI-PACFGDLASLRNLSLASNELISVIPSTFWNLKDILYL 500
LA + QLDLS+N S+ PA F L L L L L + P F L + YL
Sbjct: 75 AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134
Query: 501 NLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP 560
L N+L +L L + N S V A G+ L L L N + P
Sbjct: 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194
Query: 561 DSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAES 620
+F DL L +L L NNLS +L L L+ L L+ N + +
Sbjct: 195 HAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFR 254
Query: 621 FEGNKLLCGSP 631
+++ C P
Sbjct: 255 GSSSEVPCSLP 265
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.5 bits (181), Expect = 5e-15
Identities = 52/256 (20%), Positives = 84/256 (32%), Gaps = 11/256 (4%)
Query: 206 FSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQS 265
N RNL +L L N L + A ++ ++ + L +N+ S+
Sbjct: 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98
Query: 266 IPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRL 325
+ L L L+L P + L L LQ N+ TF +L NL L
Sbjct: 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158
Query: 326 GLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDC 385
L+ N ++S+ + L+ + L N + + L +
Sbjct: 159 FLHGNRISSVPER-----AFRGLHSLDRLLLHQNRVAHV--HPHAFRDLGRLMTLYLFAN 211
Query: 386 NVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCR 445
N+S E + L L L N LQ +++ S+P
Sbjct: 212 NLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQR--- 267
Query: 446 LAKVYQLDLSNNKLSG 461
LA L+ N L G
Sbjct: 268 LAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.6 bits (145), Expect = 2e-10
Identities = 46/262 (17%), Positives = 72/262 (27%), Gaps = 12/262 (4%)
Query: 6 SNITTDLDALHALKTHITNDPTNFFAK------NWNSSISFCNWTGVTCDVHSHRVTALN 59
I + I++ P F W S +
Sbjct: 28 VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDL 87
Query: 60 ISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPT 119
+ L P+ L L +L L P + L+ L DN L +P
Sbjct: 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPD 146
Query: 120 NICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEEL 179
+ +L L L N A L L L N A P +L +L L
Sbjct: 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 206
Query: 180 YLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVI 239
YL N A L +++ + N C+ L+ +++ +
Sbjct: 207 YLFANN-LSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSL 264
Query: 240 PAEIFNMSTIQGVGLQNNSLSG 261
P + + L N L G
Sbjct: 265 PQRLAGRDLKR---LAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.1 bits (141), Expect = 7e-10
Identities = 44/237 (18%), Positives = 75/237 (31%), Gaps = 8/237 (3%)
Query: 3 ANTSNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHS--HRVTALNI 60
N+T + L T V R+ L++
Sbjct: 53 RACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112
Query: 61 SHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTN 120
L P L++LQ L+L N + ++ L L N++S +P
Sbjct: 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPER 171
Query: 121 ICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELY 180
L + L L +N P A + L L L N+ + + + L L+ L
Sbjct: 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 231
Query: 181 LSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237
L+ N L +++ + S + C +P L ++ L N L G
Sbjct: 232 LNDNPWVCDCRARPLWAWLQKF--RGSSSEVPCSLPQ---RLAGRDLKRLAANDLQG 283
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.1 bits (144), Expect = 2e-10
Identities = 47/213 (22%), Positives = 71/213 (33%), Gaps = 9/213 (4%)
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
P S + +N K +P L IL LS N + T+L
Sbjct: 2 PICEVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLT 58
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237
+L L L G L + + +P L L VL + N+L
Sbjct: 59 QLNLDRAELTKLQVDGTL----PVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTS 114
Query: 238 VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASK 297
+ + + +Q + L+ N L + P LE+L L N+ + +
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLT-PTPKLEKLSLANNNLTELPAGLLNGLEN 173
Query: 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNN 330
L L LQ+NS IP F L L+ N
Sbjct: 174 LDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.8 bits (138), Expect = 1e-09
Identities = 39/187 (20%), Positives = 60/187 (32%), Gaps = 24/187 (12%)
Query: 438 SIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVI---------- 487
++P ++ + + L LS N L A L L+L EL +
Sbjct: 24 ALPPDLPKDTTI--LHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGT 81
Query: 488 -----------PSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP 536
P L + L++S N LT + L L ++ N + P
Sbjct: 82 LDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPP 141
Query: 537 NAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDL 596
+ L+ L L N L L +L +L L N+L +IP L
Sbjct: 142 GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFA 200
Query: 597 NLSFNKL 603
L N
Sbjct: 201 FLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.6 bits (127), Expect = 4e-08
Identities = 28/202 (13%), Positives = 49/202 (24%), Gaps = 9/202 (4%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
+N +L+ +P L L L N ++ L L+ +L+
Sbjct: 15 VNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ 71
Query: 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE 177
L + + + + +P
Sbjct: 72 VDGTLPVLGTLDLSHNQLQSLPLLG-----QTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237
+ G L K + ++N + L NL+ L L N L
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY- 185
Query: 238 VIPAEIFNMSTIQGVGLQNNSL 259
IP F + L N
Sbjct: 186 TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.2 bits (126), Expect = 5e-08
Identities = 38/235 (16%), Positives = 71/235 (30%), Gaps = 22/235 (9%)
Query: 242 EIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRL 301
E+ +++ V +L+ ++P + L+L N + ++L++L
Sbjct: 5 EVSKVASHLEVNCDKRNLT----ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 302 ELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI 361
L + G L L L L++N S + L + + S
Sbjct: 61 NL--DRAELTKLQVDGTLPVLGTLDLSHNQ---------LQSLPLLGQTLPALTVLDVSF 109
Query: 362 DGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGG-NNLNGSIPITLG 420
+ + S N ++P + T + NNL L
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
Query: 421 KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRN 475
L+ L L +N L +IP + L N C ++ R
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL-----CNCEILYFRR 218
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (96), Expect = 3e-04
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLN 573
E+ + ++++ N + +P + KD L L N+L + L LN
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 574 LSNNN 578
L
Sbjct: 62 LDRAE 66
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (133), Expect = 7e-09
Identities = 33/266 (12%), Positives = 81/266 (30%), Gaps = 15/266 (5%)
Query: 80 QSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFH 139
Q+L L + + + + + + + + + ++LS ++
Sbjct: 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFS--PFRVQHMDLSNSVIE 59
Query: 140 G-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGL-------QGAYD 191
+ LS C+ L+ L L + I + + L L LS
Sbjct: 60 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSS 119
Query: 192 HGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQG 251
L + F+ + + + + L + N + + +
Sbjct: 120 CSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH 179
Query: 252 VGLQNNSLSGSLQSIPYVRLPNLEELYLWG-NHFSGSIPNFIFNASKLSRLELQKNSFSG 310
+ L ++ + + + +L L+ L L + L L++ G
Sbjct: 180 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDG 239
Query: 311 FIPSTFGNLRNLKRLGLNNNHLTSLT 336
+ L +L+ +N +H T++
Sbjct: 240 TLQLLKEALPHLQ---INCSHFTTIA 262
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.2 bits (126), Expect = 5e-08
Identities = 41/257 (15%), Positives = 83/257 (32%), Gaps = 7/257 (2%)
Query: 216 PNEIGNLRNLEVLALGLNKL-VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNL 274
P+ G L + V+A + + AE F+ +Q + L N+ + S + L
Sbjct: 14 PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKL 73
Query: 275 EELYLWGNHFSGSIPNFIFNASKLSRLELQ--KNSFSGFIPSTFGNLRNLKRLGLNNNHL 332
+ L L G S I N + S L RL L + + + L L L+
Sbjct: 74 QNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 133
Query: 333 TSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP 392
+ ++ +S + ++ V + + + +
Sbjct: 134 FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCF 193
Query: 393 EEIGNLTNLIGFYLGG-NNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQ 451
+E L L L ++ + LG++ L+ L +G++ L
Sbjct: 194 QEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPH--- 250
Query: 452 LDLSNNKLSGSIPACFG 468
L ++ + + G
Sbjct: 251 LQINCSHFTTIARPTIG 267
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.4 bits (124), Expect = 1e-07
Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 22/284 (7%)
Query: 354 IDLSSNSIDGILSRKSVGNL-SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN 412
+DL+ + L G L S + F + + E + + L + +
Sbjct: 5 LDLTGKN----LHPDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIE 59
Query: 413 G-SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSN--NKLSGSIPACFGD 469
++ L + KLQ L +L I + + + + + +L+LS ++
Sbjct: 60 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSS 119
Query: 470 LASLRNLSLASNELIS------VIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523
+ L L+L+ + + + + N L + LV
Sbjct: 120 CSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH 179
Query: 524 IDFSMN-NFSGVIPNAIGGIKDLQFLFLEY-NILQGSIPDSFGDLMSLKSLNLSNNNLSG 581
+D S + + LQ L L + G++ +LK+L + G
Sbjct: 180 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDG 239
Query: 582 SIPVSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNK 625
++ + E L L ++ + + GN + G K
Sbjct: 240 TLQLLKEA---LPHLQINCSHFTTIAR--PTIGNKKNQEIWGIK 278
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.0 bits (123), Expect = 1e-07
Identities = 35/276 (12%), Positives = 79/276 (28%), Gaps = 19/276 (6%)
Query: 130 SLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA 189
+L+L+ H + L + + R + + E + +++ + LS + ++ +
Sbjct: 4 TLDLTGKNLHPDVTGRLLSQG-VIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVS 61
Query: 190 YDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAE------- 242
HG L K + I N + NL L L +
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 243 -IFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRL 301
+ ++ + ++ + Y S + +
Sbjct: 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 181
Query: 302 ELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI 361
F L L+ L L+ + + L L L+ + +
Sbjct: 182 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY----DIIPETLLELGEIPTLKTLQVF---- 233
Query: 362 DGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGN 397
GI+ ++ L +L ++ + + IGN
Sbjct: 234 -GIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGN 268
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.9 bits (121), Expect = 3e-08
Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 6/125 (4%)
Query: 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533
R L LA +L + L + +L+LS N L P + L+ L + S N
Sbjct: 1 RVLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALEN 57
Query: 534 VIPNAIGGIKDLQFLFLEYN-ILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSY 592
V A + LQ L L N + Q + L LNL N+L +
Sbjct: 58 VDGVAN--LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 593 LKDLN 597
L ++
Sbjct: 116 LPSVS 120
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 49.7 bits (118), Expect = 8e-08
Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 8/120 (6%)
Query: 58 LNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117
L+++H L T+ L L + L L N+ P + L+ L +
Sbjct: 3 LHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPP----ALAALRCLEVLQASDNALE 56
Query: 118 PTNICSNLPFFESLNLSKNMFHGG-IPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKL 176
+ +NLP + L L N L +C L +L L N L ++
Sbjct: 57 NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC-QEEGIQERLAEM 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.0 bits (111), Expect = 7e-07
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Query: 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLE-YNILQG 557
L+L+ LT L L ++ +D S N + P + L+ L + +
Sbjct: 2 VLHLAHKDLTVLCHL--EQLLLVTHLDLSHNRLRALPP----ALAALRCLEVLQASDNAL 55
Query: 558 SIPDSFGDLMSLKSLNLSNNNL-SGSIPVSLEKLSYLKDLNLSFNKLEGE 606
D +L L+ L L NN L + L L LNL N L E
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.6 bits (110), Expect = 1e-06
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 12/128 (9%)
Query: 378 KIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG 437
++ ++ +++ + + L + L N L P L L+ L+VL DN
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNA--L 55
Query: 438 SIPDEVCRLAKVYQLDLSNNKL-SGSIPACFGDLASLRNLSLASNEL------ISVIPST 490
D V L ++ +L L NN+L + L L+L N L +
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 491 FWNLKDIL 498
++ IL
Sbjct: 116 LPSVSSIL 123
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 45.5 bits (107), Expect = 3e-06
Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 9/128 (7%)
Query: 153 RILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212
R+L L++ D + + L + L LS N L+ + + +
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA----LAALRCLEVLQASDNA 54
Query: 213 CEIPNEIGNLRNLEVLALGLNKLVGV-IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVR- 270
E + + NL L+ L L N+L + + + + LQ NSL +
Sbjct: 55 LENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAE 114
Query: 271 -LPNLEEL 277
LP++ +
Sbjct: 115 MLPSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.0 bits (98), Expect = 4e-05
Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 14/127 (11%)
Query: 323 KRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDM 382
+ L L + LT L L + +DLS N + + L+ + +
Sbjct: 1 RVLHLAHKDLTVL-------CHLEQLLLVTHLDLSHNRLRALPP-----ALAALRCLEVL 48
Query: 383 SDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSIPD 441
+ + + + NL L L N L S I L +L +L N L
Sbjct: 49 QASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEG 107
Query: 442 EVCRLAK 448
RLA+
Sbjct: 108 IQERLAE 114
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 39.3 bits (91), Expect = 4e-04
Identities = 21/120 (17%), Positives = 33/120 (27%), Gaps = 7/120 (5%)
Query: 227 VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG 286
VL L L + + + + + L +N L ++ L LE L N
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALA--ALRCLEVLQASDNALEN 57
Query: 287 SIPNFIFNASKLSRLELQKNSFSGF-IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL 345
+ L L N + L L L N L L+ +
Sbjct: 58 VDGVANLPRLQ--ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 52.0 bits (123), Expect = 7e-08
Identities = 30/234 (12%), Positives = 71/234 (30%), Gaps = 25/234 (10%)
Query: 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353
+ ++ K++ + + T +L + L +T++ + L
Sbjct: 17 ALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-------EGVQYLNNLIG 67
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
++L N I + K++ ++ + + + + I L L G
Sbjct: 68 LELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAG 127
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
I + LS S +L+ L
Sbjct: 128 LSN------------LQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKL 175
Query: 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFS 527
L N++ + P +L +++ ++L +N ++ PL N L + +
Sbjct: 176 TTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPL--ANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 50.8 bits (120), Expect = 2e-07
Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 22/217 (10%)
Query: 397 NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSN 456
L N I G +N+ +T L + L + +I V L + L+L +
Sbjct: 17 ALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKD 72
Query: 457 NKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG 516
N+++ P + LS + +S I L ++ +
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 517 NLKVLVKI--------------DFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDS 562
L + + S+ N + + L L + N + P
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-- 190
Query: 563 FGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLS 599
L +L ++L NN +S P L S L + L+
Sbjct: 191 LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 48.5 bits (114), Expect = 1e-06
Identities = 36/218 (16%), Positives = 72/218 (33%), Gaps = 18/218 (8%)
Query: 221 NLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLW 280
L N +A G + + + ++ I + ++ +++ + Y L NL L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIEGVQY--LNNLIGLELK 71
Query: 281 GNHFSG--------SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHL 332
N + I + + L + S ++L
Sbjct: 72 DNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNL 131
Query: 333 TSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP 392
L L+L+ ++++S L + S + + N L D +S P
Sbjct: 132 QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLAN-LSKLTTLKADDNKISDISP 190
Query: 393 EEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430
+ +L NLI +L N ++ P L L ++
Sbjct: 191 --LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 43.9 bits (102), Expect = 4e-05
Identities = 33/220 (15%), Positives = 65/220 (29%), Gaps = 21/220 (9%)
Query: 148 NCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFL----QIFVKNIF 203
+ ++ + + +L + L G+ +L + +K+
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQ 74
Query: 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL 263
+ E+ N + L + ++ + L S L
Sbjct: 75 ITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVL 134
Query: 264 Q------SIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFG 317
+ YL + S + N SKL+ L+ N S P
Sbjct: 135 YLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LA 192
Query: 318 NLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357
+L NL + L NN ++ +S L+N L + L+
Sbjct: 193 SLPNLIEVHLKNNQISD-------VSPLANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 43.9 bits (102), Expect = 4e-05
Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 23/219 (10%)
Query: 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431
L++++KI NV+ ++ + +L + G + +I + L L L
Sbjct: 17 ALANAIKI-AAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELK 71
Query: 432 DNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTF 491
DN++ P + +L + K +I + ++ S
Sbjct: 72 DNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNL 131
Query: 492 WNLKDILYLNLSSNSLTGPL--------------PLEIGNLKVLVKIDFSMNNFSGVIPN 537
L L + + L G + NL L + N S + P
Sbjct: 132 QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP- 190
Query: 538 AIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSN 576
+ + +L + L+ N + P + +L + L+N
Sbjct: 191 -LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 16/210 (7%)
Query: 254 LQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIP 313
++++ + + L + L +G + +I + + L LEL+ N + P
Sbjct: 26 AGKSNVTDT---VTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDNQITDLAP 80
Query: 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSL-------SNCKYLEFIDLSSNSIDGILS 366
L N S L + +L ++ L + +
Sbjct: 81 LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQ 140
Query: 367 RKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQ 426
++ L+ + +S N S + NL+ L N ++ P L L L
Sbjct: 141 ITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLI 198
Query: 427 VLYFPDNKLEGSIPDEVCRLAKVYQLDLSN 456
++ +N++ P + + ++ + L+N
Sbjct: 199 EVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.1 bits (87), Expect = 0.003
Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 20/201 (9%)
Query: 422 LQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASN 481
L + + + ++ L + L ++ +I L +L L L N
Sbjct: 18 LANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDN 73
Query: 482 ELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGG 541
++ + P L L+ + + + + + + +
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 542 IKDLQFLFLEYNIL--------------QGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSL 587
+ + L Q S +L L +L +N +S P L
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--L 191
Query: 588 EKLSYLKDLNLSFNKLEGEIP 608
L L +++L N++ P
Sbjct: 192 ASLPNLIEVHLKNNQISDVSP 212
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.1 bits (87), Expect = 0.003
Identities = 33/222 (14%), Positives = 61/222 (27%), Gaps = 23/222 (10%)
Query: 95 FSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI 154
F + ++ G + ++ + + +L+ + L
Sbjct: 13 FPDPALANAIKIAAGKSNVTDTVTQADLDGI---TTLSAFGTGVTT--IEGVQYLNNLIG 67
Query: 155 LRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSH------ 208
L L N P + EL + A + Q +
Sbjct: 68 LELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAG 127
Query: 209 -------NFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSG 261
+I N + L + + N+S + + +N +S
Sbjct: 128 LSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD 187
Query: 262 SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLEL 303
P LPNL E++L N S P + N S L + L
Sbjct: 188 I---SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.2 bits (123), Expect = 8e-08
Identities = 38/228 (16%), Positives = 72/228 (31%), Gaps = 8/228 (3%)
Query: 110 DNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKE 169
+++++ EIP+++ N L A S L + +S ND I +
Sbjct: 17 ESKVT-EIPSDLPRNA---IELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 72
Query: 170 IGNLTKLEELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVL 228
+ + + Q ++ S+ K + +L
Sbjct: 73 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 132
Query: 229 ALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSI 288
+ N + I F + + V L N L+EL L N+ +
Sbjct: 133 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEEL 192
Query: 289 PNFIF-NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335
PN +F AS L++ + NL+ L+ + +L L
Sbjct: 193 PNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRA--RSTYNLKKL 238
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.7 bits (101), Expect = 4e-05
Identities = 34/231 (14%), Positives = 65/231 (28%), Gaps = 7/231 (3%)
Query: 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKL 435
S ++F + V+ IP ++ N I L L+ + N +
Sbjct: 9 SNRVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 436 EGSIPDEVCRLAKVYQLDL----SNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTF 491
I +V +N +S + + +
Sbjct: 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125
Query: 492 WNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLE 551
K +L + + N T +G V + + N + A G + + +
Sbjct: 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSD 185
Query: 552 YNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNK 602
N L+ D F L++S + LE L L+ + K
Sbjct: 186 NNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (96), Expect = 2e-04
Identities = 33/246 (13%), Positives = 62/246 (25%), Gaps = 22/246 (8%)
Query: 41 CNWTGVTCDVHS---------HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSG 91
C+ C L L L+ + + N
Sbjct: 8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 67
Query: 92 SIPFSIFNIHTLKLL-SFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCT 150
I +F+ I NLP + L +S +
Sbjct: 68 VIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSL 127
Query: 151 YLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNF 210
+L + N I + E + L N H + + S N
Sbjct: 128 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNN 187
Query: 211 SKCEIPNEI-GNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYV 269
+ E+PN++ +L + ++ + + N+ ++ N
Sbjct: 188 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK----------- 236
Query: 270 RLPNLE 275
+LP LE
Sbjct: 237 KLPTLE 242
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (94), Expect = 3e-04
Identities = 31/221 (14%), Positives = 64/221 (28%), Gaps = 3/221 (1%)
Query: 262 SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRN 321
+ IP N EL L ++E+ +N I + +
Sbjct: 19 KVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP 78
Query: 322 LKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFD 381
+ L + N L+++ +S+ I + + +L L
Sbjct: 79 KLH---EIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQ 135
Query: 382 MSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPD 441
+ + +G + +L N + Q ++ +N LE D
Sbjct: 136 DNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPND 195
Query: 442 EVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNE 482
+ LD+S ++ +L LR S + +
Sbjct: 196 VFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (94), Expect = 4e-04
Identities = 21/220 (9%), Positives = 53/220 (24%), Gaps = 5/220 (2%)
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
IP+ + L F +L+++ ++ N + + F +
Sbjct: 22 EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 79
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYL 406
+ + I+ + + + I L ++
Sbjct: 80 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN 139
Query: 407 GGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPAC 466
S + L + ++ + NN L
Sbjct: 140 IHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLS---DNNNLEELPNDV 196
Query: 467 FGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNS 506
F + L ++ + S+ NLK + + +
Sbjct: 197 FHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.1 bits (89), Expect = 0.001
Identities = 29/239 (12%), Positives = 61/239 (25%), Gaps = 13/239 (5%)
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNG 413
+ + I S +L + + +L + N++
Sbjct: 13 FLCQESKVTEIPS-----DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 67
Query: 414 SIPITLGKLQKLQV--LYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA--CFGD 469
I + N L P+ L + L +SN +
Sbjct: 68 VIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSL 127
Query: 470 LASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMN 529
L ++ N S + + L L+ N + ++ N
Sbjct: 128 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNN 187
Query: 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLE 588
N + + G L + + +L L++ + N +P +LE
Sbjct: 188 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL---KKLP-TLE 242
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 52.9 bits (125), Expect = 1e-07
Identities = 56/356 (15%), Positives = 102/356 (28%), Gaps = 43/356 (12%)
Query: 149 CTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSH 208
L L+ + +P+ +L E L S N L
Sbjct: 37 DRQAHELELNNLGLSS-LPELPPHL---ESLVASCNSLT--------------------- 71
Query: 209 NFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPY 268
E+P +L++L V L L + P + + + + S I
Sbjct: 72 -----ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIID 126
Query: 269 VRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTF---GNLRNLKRL 325
V +L++L L + ++ +L
Sbjct: 127 VDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLES 186
Query: 326 GLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDC 385
+ N++ EL L L+ + + + L +V + +
Sbjct: 187 IVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSL 246
Query: 386 NVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCR 445
L+ L N + I L+ L +NKL +P R
Sbjct: 247 TFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR 305
Query: 446 LAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLN 501
L + L S N L+ +P +L+ L + N L P +++D L +N
Sbjct: 306 LER---LIASFNHLA-EVPELPQ---NLKQLHVEYNPLRE-FPDIPESVED-LRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 52.1 bits (123), Expect = 2e-07
Identities = 49/328 (14%), Positives = 96/328 (29%), Gaps = 27/328 (8%)
Query: 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114
L +++L LS ++P +L +SL N + +P ++ +L + + LS
Sbjct: 40 AHELELNNLGLS-SLPELPPHL---ESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALS 94
Query: 115 GEIPT--------NICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGI 166
P N LP ++ + K + + ++ +
Sbjct: 95 DLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEE 154
Query: 167 PKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLE 226
E+ NL L +Y N L+ D + +P +
Sbjct: 155 LPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNN 214
Query: 227 VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG 286
+L + + + + L + + + L L + N S
Sbjct: 215 LLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSN 274
Query: 287 SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
I + L L + N +P+ L L + NHL + L L
Sbjct: 275 EIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLERLI---ASFNHLAEVPELPQNLKQL- 329
Query: 347 NCKYLEFIDLSSNSIDGILS-RKSVGNL 373
+ N + +SV +L
Sbjct: 330 --------HVEYNPLREFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 51.0 bits (120), Expect = 4e-07
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 454 LSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL 513
N S I + SL L++++N+LI +P+ L+ L S N L +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLE---RLIASFNHLAE-VPE 321
Query: 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQF 547
NLK L N P+ ++DL+
Sbjct: 322 LPQNLKQL---HVEYNPLRE-FPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 50.6 bits (119), Expect = 5e-07
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 429 YFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP 488
+ N I + +L++SNNKL +PA L L + N L + +P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPP---RLERLIASFNHL-AEVP 320
Query: 489 STFWNLKDILYLNLSSNSLTG--PLPLEIGNLKV 520
NLK L++ N L +P + +L++
Sbjct: 321 ELPQNLK---QLHVEYNPLREFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 45.2 bits (105), Expect = 2e-05
Identities = 38/329 (11%), Positives = 88/329 (26%), Gaps = 21/329 (6%)
Query: 103 LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDF 162
L + L +++ P ESL S N +P + L + +
Sbjct: 40 AHELELNNLGL-----SSLPELPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKAL 93
Query: 163 AGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNL 222
+ P +L ++ + +
Sbjct: 94 SDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLE 153
Query: 223 RNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGN 282
E+ L + + + + + + L+ +P ++ N
Sbjct: 154 ELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADN 213
Query: 283 HFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLN----NNHLTSLTLE 338
+ ++P+ + L+ + S + N
Sbjct: 214 NLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASS 273
Query: 339 LSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNL 398
S LE +++S+N + + L L+ S +++ +PE NL
Sbjct: 274 NEIRSLCDLPPSLEELNVSNNKL------IELPALPPRLERLIASFNHLA-EVPELPQNL 326
Query: 399 TNLIGFYLGGNNLNGSIPITLGKLQKLQV 427
L ++ N L P ++ L++
Sbjct: 327 KQL---HVEYNPLR-EFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 44.0 bits (102), Expect = 6e-05
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 13/97 (13%)
Query: 233 NKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFI 292
N I + +++ + + NN L +P + P LE L NH + +P
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLI----ELPAL-PPRLERLIASFNHLA-EVPELP 323
Query: 293 FNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNN 329
N L +L ++ N P ++ +L+ +N+
Sbjct: 324 QN---LKQLHVEYNPLRE-FPDIPESVEDLR---MNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 42.1 bits (97), Expect = 2e-04
Identities = 20/115 (17%), Positives = 36/115 (31%), Gaps = 10/115 (8%)
Query: 40 FCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFN 99
+ + S I S SL+ L + +N+ +P
Sbjct: 247 TFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR 305
Query: 100 IHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI 154
+ L N L+ E+P + NL + L++ N P + LR+
Sbjct: 306 LERLIA---SFNHLA-EVP-ELPQNL---KQLHVEYNPLR-EFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.3 bits (95), Expect = 4e-04
Identities = 26/98 (26%), Positives = 34/98 (34%), Gaps = 13/98 (13%)
Query: 549 FLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608
N I SL+ LN+SNN L +P +L L SFN L E+P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLER---LIASFNHLA-EVP 320
Query: 609 KGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQHTR 646
+ N E N L P S++ R
Sbjct: 321 E--LPQNLKQLHVEYNPLRE------FPDIPESVEDLR 350
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (120), Expect = 5e-07
Identities = 21/120 (17%), Positives = 33/120 (27%), Gaps = 9/120 (7%)
Query: 103 LKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHG----GIPSALSNCTYLRILRLS 158
++ L +LS + L + + L I SAL L L L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 159 YNDFAGGIPKEIG-----NLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKC 213
N+ + K+++L L L GA +Q H
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 123
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.8 bits (114), Expect = 3e-06
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 298 LSRLELQKNSFSGF-IPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDL 356
+ L++Q S L+ + + L++ LT + S+L L ++L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCK-DISSALRVNPALAELNL 62
Query: 357 SSNSIDGILSR---KSVGNLSHSLKIFDMSDCN 386
SN + + + + S ++ + +C
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (108), Expect = 1e-05
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 311 FIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSI--DGILS-R 367
L+ L L + ++ + S ++L L +DLS+N + GIL
Sbjct: 360 LCQGLGQPGSVLRVLWLADCDVSDSSCS-SLAATLLANHSLRELDLSNNCLGDAGILQLV 418
Query: 368 KSVGNLSHSLKIFDMSDCNVSGSIPEEIGNL 398
+SV L+ + D S + + + L
Sbjct: 419 ESVRQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (103), Expect = 5e-05
Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 544 DLQFLFLEYN-ILQGSIPDSFGDLMSLKSLNLSNNNLSG----SIPVSLEKLSYLKDLNL 598
D+Q L ++ + + L + + L + L+ I +L L +LNL
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 599 SFNKLEGEIPK 609
N+L
Sbjct: 63 RSNELGDVGVH 73
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (101), Expect = 9e-05
Identities = 11/92 (11%), Positives = 28/92 (30%), Gaps = 5/92 (5%)
Query: 273 NLEELYLWGNHFSGS-IPNFIFNASKLSRLELQKNSFSG----FIPSTFGNLRNLKRLGL 327
+++ L + S + + + + L + I S L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 328 NNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359
+N L + + + ++ + L +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (100), Expect = 1e-04
Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 5/91 (5%)
Query: 496 DILYLNLSSNSLT-GPLPLEIGNLKVLVKIDFSMNNFSGV----IPNAIGGIKDLQFLFL 550
DI L++ L+ + L+ + + I +A+ L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 551 EYNILQGSIPDSFGDLMSLKSLNLSNNNLSG 581
N L + S + +L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (100), Expect = 1e-04
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 8/85 (9%)
Query: 99 NIHTLKLLSFGDNQLSGEIPTNICS---NLPFFESLNLSKNMFHGGIPSALS-----NCT 150
L++L D +S +++ + L+LS N L
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 151 YLRILRLSYNDFAGGIPKEIGNLTK 175
L L L ++ + + L K
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 545 LQFLFLEYNILQG----SIPDSFGDLMSLKSLNLSNNNLSGSIPVSL-----EKLSYLKD 595
L+ L+L + S+ + SL+ L+LSNN L + + L + L+
Sbjct: 371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQ 430
Query: 596 LNLSFNKLEGEIPK 609
L L E+
Sbjct: 431 LVLYDIYWSEEMED 444
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 14/105 (13%)
Query: 240 PAEIFNMSTIQGVGLQNNSLSG-SLQSIPYV--RLPNLEELYLWGNHFSGSIPNFIFNA- 295
S ++ + L + +S S S+ +L EL L N + + +
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 296 ----SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLT 336
L +L L +S + L+ L + L ++
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEME------DRLQALEKDKPSLRVIS 460
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (98), Expect = 2e-04
Identities = 18/148 (12%), Positives = 42/148 (28%), Gaps = 12/148 (8%)
Query: 20 THITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSL 79
+ + + F + + +++ + + S L
Sbjct: 312 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVL 371
Query: 80 QSLFLHSNQFSG----SIPFSIFNIHTLKLLSFGDNQLSGEIPTNICS----NLPFFESL 131
+ L+L S S+ ++ H+L+ L +N L + E L
Sbjct: 372 RVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQL 431
Query: 132 NLSKNMFHGGIPSALS----NCTYLRIL 155
L + + L + LR++
Sbjct: 432 VLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.3 bits (97), Expect = 2e-04
Identities = 15/72 (20%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 452 LDLSNNKLSGS-IPACFGDLASLRNLSLASNEL----ISVIPSTFWNLKDILYLNLSSNS 506
LD+ +LS + L + + L L I S + LNL SN
Sbjct: 7 LDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE 66
Query: 507 LTGPLPLEIGNL 518
L +
Sbjct: 67 LGDVGVHCVLQG 78
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (96), Expect = 3e-04
Identities = 13/76 (17%), Positives = 19/76 (25%), Gaps = 9/76 (11%)
Query: 122 CSNLPFFESLNLSKNMFHG----GIPSALSNCTYLRILRLSYNDFAGGIPKEIG-----N 172
L L+ + + L LR L LS N ++
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 173 LTKLEELYLSFNGLQG 188
LE+L L
Sbjct: 425 GCLLEQLVLYDIYWSE 440
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (96), Expect = 4e-04
Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 10/89 (11%)
Query: 521 LVKIDFSMNNFSGV-IPNAIGGIKDLQFLFLEYNILQG----SIPDSFGDLMSLKSLNLS 575
+ +D S + ++ Q + L+ L I + +L LNL
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 576 NNNLSGSIPVSL-----EKLSYLKDLNLS 599
+N L + ++ L+L
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQ 92
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (95), Expect = 5e-04
Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Query: 224 NLEVLALGLNKLVGVIPAEIF-NMSTIQGVGLQNNSLSG-SLQSIPYV--RLPNLEELYL 279
+++ L + +L AE+ + Q V L + L+ + I P L EL L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 280 WGNHFSGSIPNFIFNASKLSRLELQKNSFSGF 311
N + + + ++QK S
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (93), Expect = 7e-04
Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 9/97 (9%)
Query: 52 SHRVTALNISHLSLSGTIPSRL-GNLSSLQSLFLHSNQFSG----SIPFSIFNIHTLKLL 106
S + +L+I LS + L L Q + L + I ++ L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 107 SFGDNQLSGEIPTNICSNLPFF----ESLNLSKNMFH 139
+ N+L + L + L+L
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLT 97
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (92), Expect = 0.001
Identities = 15/99 (15%), Positives = 32/99 (32%), Gaps = 5/99 (5%)
Query: 400 NLIGFYLGGNNLNGS-IPITLGKLQKLQVLYFPDNKLEG----SIPDEVCRLAKVYQLDL 454
++ + L+ + L LQ+ QV+ D L I + + +L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 455 SNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWN 493
+N+L C + + L + +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGC 101
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (91), Expect = 0.001
Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 9/83 (10%)
Query: 517 NLKVLVKIDFSMNNFSGV----IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM----- 567
VL + + + S + + L+ L L N L + + +
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 568 SLKSLNLSNNNLSGSIPVSLEKL 590
L+ L L + S + L+ L
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (88), Expect = 0.003
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 10/89 (11%)
Query: 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSG----SIPEEIGNLTNLIGFYL 406
++ +D+ + + + L ++ + DC ++ I + L L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQ-CQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 407 GGNNLNGSIPITLGKL-----QKLQVLYF 430
N L + + K+Q L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSL 91
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.004
Identities = 14/115 (12%), Positives = 30/115 (26%), Gaps = 9/115 (7%)
Query: 16 HALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGT----IPS 71
+ N + + L ++ +S + + +
Sbjct: 332 FSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 391
Query: 72 RLGNLSSLQSLFLHSNQFSGSIPFSIF-----NIHTLKLLSFGDNQLSGEIPTNI 121
L SL+ L L +N + + L+ L D S E+ +
Sbjct: 392 TLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRL 446
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.004
Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
Query: 464 PACFGDLASLRNLSLASNEL----ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG--- 516
+ LR L LA ++ S + +T + L+LS+N L L++
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 517 --NLKVLVKIDFSMNNFSGVIPNAIGGIK 543
+L ++ +S + + + ++
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQALE 450
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 48.9 bits (115), Expect = 7e-07
Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 22/216 (10%)
Query: 390 SIPEEIG------NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEV 443
++P I I L ++ +T +L + + ++ ++ +
Sbjct: 9 TVPTPIKQIFSDDAFAETIKDNLKKKSVTD--AVTQNELNSIDQIIANNSDIKSVQG--I 64
Query: 444 CRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503
L V +L L+ NKL+ LA+L+NL + V + L
Sbjct: 65 QYLPNVTKLFLNGNKLTD-----IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLK---- 115
Query: 504 SNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSF 563
S SL +I L L +++ + + + + I
Sbjct: 116 SLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-L 174
Query: 564 GDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLS 599
L L++L LS N++S + +L L L L L
Sbjct: 175 AGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 5e-05
Identities = 34/236 (14%), Positives = 65/236 (27%), Gaps = 47/236 (19%)
Query: 123 SNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLS 182
NL K + + + + + +D I L + +L+L+
Sbjct: 21 DAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLN 76
Query: 183 FNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAE 242
N L L+ + + +LE ++
Sbjct: 77 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLE----------HNGISD 126
Query: 243 IFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLE 302
I + + + + RL L+ L L N S +P
Sbjct: 127 INGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP------------- 173
Query: 303 LQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSS 358
L L+ L L+ NH++ L +L+ K L+ ++L S
Sbjct: 174 -------------LAGLTKLQNLYLSKNHISD-------LRALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.7 bits (86), Expect = 0.003
Identities = 36/185 (19%), Positives = 70/185 (37%), Gaps = 28/185 (15%)
Query: 439 IPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498
D+ A+ + +L ++ ++ +L S+ + ++++ SV L ++
Sbjct: 18 FSDDA--FAETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQG--IQYLPNVT 71
Query: 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSM------------------NNFSGVIPNAIG 540
L L+ N LT P + NLK L + + I + G
Sbjct: 72 KLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDING 129
Query: 541 GIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSF 600
+ Q L + + L L +L+L +N +S +P L L+ L++L LS
Sbjct: 130 LVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 187
Query: 601 NKLEG 605
N +
Sbjct: 188 NHISD 192
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 48.3 bits (113), Expect = 3e-06
Identities = 47/315 (14%), Positives = 99/315 (31%), Gaps = 30/315 (9%)
Query: 321 NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH--SLK 378
+++ L + +T+ + S + L ++ I LS N+I +R N++ L+
Sbjct: 4 SIEGKSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLE 62
Query: 379 IFDMSDC----------NVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVL 428
I + SD + + + L L N + L
Sbjct: 63 IAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTP 122
Query: 429 YFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP 488
+ + +L+ NK + + P + L S + +
Sbjct: 123 LEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 182
Query: 489 STFWNLKDI------LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGI 542
+ L + + + L L + ++ + + S + A+
Sbjct: 183 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 242
Query: 543 KDLQFLFLEYNILQGSIPDSFGD------LMSLKSLNLSNNNLSGSIPVSL-----EKLS 591
+L+ L L +L + D + L++L L N + +L EK+
Sbjct: 243 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMP 302
Query: 592 YLKDLNLSFNKLEGE 606
L L L+ N+ E
Sbjct: 303 DLLFLELNGNRFSEE 317
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 44.5 bits (103), Expect = 5e-05
Identities = 44/321 (13%), Positives = 85/321 (26%), Gaps = 31/321 (9%)
Query: 58 LNISHLSLSG--TIPSRLGNLSSLQSLFLHSNQFSG----SIPFSIFNIHTLKLLSFGDN 111
L + ++ ++ + L S++ + L N + +I + L++ F D
Sbjct: 10 LKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDI 69
Query: 112 QLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIG 171
F + + AL C L +RLS N F + +
Sbjct: 70 ---------------FTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLI 114
Query: 172 NLTK----LEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEV 227
+ LE LYL NGL + + + + N N
Sbjct: 115 DFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGS 174
Query: 228 LALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGS 287
+ M L + + + + S +
Sbjct: 175 MKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSA 234
Query: 288 IPNFIFNASKLSRLELQKNSFSGFIPS------TFGNLRNLKRLGLNNNHLTSLTLELSF 341
+ + + L L L S + + L+ L L N + +
Sbjct: 235 LAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 294
Query: 342 LSSLSNCKYLEFIDLSSNSID 362
L F++L+ N
Sbjct: 295 TVIDEKMPDLLFLELNGNRFS 315
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 40.2 bits (92), Expect = 8e-04
Identities = 41/363 (11%), Positives = 95/363 (26%), Gaps = 48/363 (13%)
Query: 248 TIQGVGLQNNSLSG-SLQSIPYV--RLPNLEELYLWGNHFSG----SIPNFIFNASKLSR 300
+I+G L+ ++++ +S+ V +++E+ L GN + I + L
Sbjct: 4 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEI 63
Query: 301 LELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNS 360
E LR L + L L ++ L + + ++F+ +
Sbjct: 64 AEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPL 123
Query: 361 IDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLG 420
L +G + + + + V+ + + G N T
Sbjct: 124 EHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 183
Query: 421 KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLAS 480
+ L + N + + + Y +L L + G
Sbjct: 184 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS----------- 232
Query: 481 NELISVIPSTFWNLKDILYLNLSSNSLTG------PLPLEIGNLKVLVKIDFSMNNFSGV 534
S + + ++ L L+ L+ L + N
Sbjct: 233 ----SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELD 288
Query: 535 IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLK 594
+ + L L L+ N ++++ +
Sbjct: 289 AVRTLK-------------------TVIDEKMPDLLFLELNGNRF-SEEDDVVDEIREVF 328
Query: 595 DLN 597
Sbjct: 329 STR 331
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.3 bits (87), Expect = 0.004
Identities = 11/90 (12%), Positives = 26/90 (28%), Gaps = 5/90 (5%)
Query: 543 KDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSG----SIPVSLEKLSYLKDLNL 598
K L+ + + S+ + S+K + LS N + + ++ L+
Sbjct: 8 KSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEF 66
Query: 599 SFNKLEGEIPKGGSFGNFSAESFEGNKLLC 628
S + ++ L
Sbjct: 67 SDIFTGRVKDEIPEALRLLLQALLKCPKLH 96
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 46.0 bits (107), Expect = 6e-06
Identities = 47/167 (28%), Positives = 64/167 (38%), Gaps = 9/167 (5%)
Query: 466 CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI-GNLKVLVKI 524
C G L IP L L+ N L + G L LVK+
Sbjct: 8 CEGTTVDCTGRGLKE------IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKL 59
Query: 525 DFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIP 584
+ N +G+ PNA G +Q L L N ++ F L LK+LNL +N +S +P
Sbjct: 60 ELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMP 119
Query: 585 VSLEKLSYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631
S E L+ L LNL+ N +S G CG+P
Sbjct: 120 GSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 37/188 (19%), Positives = 75/188 (39%), Gaps = 10/188 (5%)
Query: 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLN 412
+D + + I ++ ++D + + + G L +L+ L N L
Sbjct: 13 VDCTGRGLKEIPR-----DIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67
Query: 413 GSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLAS 472
G P +Q L +NK++ L ++ L+L +N++S +P F L S
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 473 LRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFS 532
L +L+LASN W + + +L+ + P ++ ++++ D + F
Sbjct: 128 LTSLNLASNPFNC-NCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIK---DLPHSEFK 183
Query: 533 GVIPNAIG 540
N+ G
Sbjct: 184 CSSENSEG 191
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 38.6 bits (88), Expect = 0.001
Identities = 23/176 (13%), Positives = 54/176 (30%), Gaps = 7/176 (3%)
Query: 142 IPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKN 201
IP + + L L+ N+ + + +
Sbjct: 23 IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI 80
Query: 202 IFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSG 261
+Q N K L L+ L L N++ V+P +++++ + L +N +
Sbjct: 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140
Query: 262 SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFG 317
+ + + L G P+ + + + +L + F ++ G
Sbjct: 141 NCHLAWFAEWLR--KKSLNGGAARCGAPSKVRD---VQIKDLPHSEFKCSSENSEG 191
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 38.6 bits (88), Expect = 0.002
Identities = 28/189 (14%), Positives = 49/189 (25%), Gaps = 14/189 (7%)
Query: 41 CNWTGVTCDVHSHR---------VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSG 91
C T V C + T L ++ L L
Sbjct: 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67
Query: 92 SIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTY 151
I + F + EI + L ++LNL N +P + +
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 152 LRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFS 211
L L ++ L + L+ + + +K++ H+
Sbjct: 128 LTSLN-LASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDL----PHSEF 182
Query: 212 KCEIPNEIG 220
KC N G
Sbjct: 183 KCSSENSEG 191
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (101), Expect = 2e-05
Identities = 14/150 (9%), Positives = 38/150 (25%), Gaps = 2/150 (1%)
Query: 442 EVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFW-NLKDILYL 500
+ C L + + +L L + + + + + L ++ L
Sbjct: 3 DACCPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNL 61
Query: 501 NLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP 560
+ + L P L +++ S N + + G+ + + +
Sbjct: 62 TIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCAL 121
Query: 561 DSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590
+ L L +
Sbjct: 122 RWLQRWEEEGLGGVPEQKLQCHGQGPLAHM 151
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (93), Expect = 2e-04
Identities = 24/140 (17%), Positives = 44/140 (31%), Gaps = 1/140 (0%)
Query: 86 SNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSA 145
+ + + L L + Q + L +L + K+ P A
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75
Query: 146 LSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQ 205
L L LS+N + + L+EL LS N L + +LQ + +
Sbjct: 76 FHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGG 134
Query: 206 FSHNFSKCEIPNEIGNLRNL 225
+C + ++ N
Sbjct: 135 VPEQKLQCHGQGPLAHMPNA 154
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.002
Identities = 28/143 (19%), Positives = 45/143 (31%), Gaps = 6/143 (4%)
Query: 375 HSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLYFPDN 433
H + + NL Y+ + L L +L+ L +
Sbjct: 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS 66
Query: 434 KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELI-SVIPSTFW 492
L PD ++ +L+LS N L S+ SL+ L L+ N L S
Sbjct: 67 GLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWLQ 125
Query: 493 NLKDILYLNLSSNSLT--GPLPL 513
++ + L G PL
Sbjct: 126 RWEEEGLGGVPEQKLQCHGQGPL 148
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (96), Expect = 1e-04
Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 6/120 (5%)
Query: 69 IPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFF 128
+ + L + + +L+ + I N+P
Sbjct: 12 LKLIMSKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRRSSMA--ATLRIIEENIPEL 67
Query: 129 ESLNLSKN--MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGL 186
SLNLS N + S + L+IL LS N+ + KLEEL+L N L
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (93), Expect = 3e-04
Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 5/154 (3%)
Query: 480 SNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAI 539
E + + D L L ++ + V ++ ++ + +
Sbjct: 5 KPEQVEQLKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRR-SSMAATLRIIE 61
Query: 540 GGIKDLQFLFLEYNILQG--SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLN 597
I +L L L N L + +LK LNLS N L + K L++L
Sbjct: 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELW 121
Query: 598 LSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631
L N L ++ + E F L G
Sbjct: 122 LDGNSLSDTFRDQSTYISAIRERFPKLLRLDGHE 155
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (89), Expect = 0.001
Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 327 LNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCN 386
L + L L +S S + +DL D L +++ + + +
Sbjct: 4 LKPEQVEQLKLIMSKRYDGSQ----QALDLKGLRSDPDLVAQNIDVVLNRRS-------S 52
Query: 387 VSGSIPEEIGNLTNLIGFYLGGNNLNG--SIPITLGKLQKLQVLYFPDNKLEGSIPDEVC 444
++ ++ N+ L+ L N L + + K L++L N+L+ +
Sbjct: 53 MAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKI 112
Query: 445 RLAKVYQLDLSNNKLSGSIPACFGDLASLRNL 476
+ K+ +L L N LS + ++++R
Sbjct: 113 KGLKLEELWLDGNSLSDTFRDQSTYISAIRER 144
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (84), Expect = 0.004
Identities = 21/138 (15%), Positives = 49/138 (35%), Gaps = 5/138 (3%)
Query: 414 SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473
+ + + K L ++ L+ ++ + ++ ++ L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPEL 67
Query: 474 RNLSLASNEL--ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531
+L+L++N L + + S ++ LNLS N L L+ L ++ N+
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
Query: 532 SGVIPNAIGGIKDLQFLF 549
S + I ++ F
Sbjct: 128 SDTFRDQSTYISAIRERF 145
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 26/196 (13%), Positives = 66/196 (33%), Gaps = 14/196 (7%)
Query: 290 NFIF---NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLS 346
N IF ++ + L K + + + + +L + L + + S+ + +L++L+
Sbjct: 9 NQIFTDTALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKSID-GVEYLNNLT 65
Query: 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYL 406
+ + + + ++ + + + N I
Sbjct: 66 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK 125
Query: 407 GGNNLN------GSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460
NLN +I + + + + + L + +LD+S+NK+S
Sbjct: 126 NLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVS 185
Query: 461 GSIPACFGDLASLRNL 476
+ L +L +L
Sbjct: 186 D--ISVLAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 38.1 bits (87), Expect = 0.003
Identities = 37/208 (17%), Positives = 67/208 (32%), Gaps = 24/208 (11%)
Query: 221 NLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLW 280
L LG + + ++ + + + S+ + Y L NL ++
Sbjct: 16 ALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SIDGVEY--LNNLTQINFS 70
Query: 281 GNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340
N + + N +KL + + N + P L N L+
Sbjct: 71 NNQLTD--ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 128
Query: 341 FLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTN 400
L+ L +S S + SL+ + S V+ P + NLT
Sbjct: 129 NLNRLELSSN-------------TISDISALSGLTSLQQLNFSSNQVTDLKP--LANLTT 173
Query: 401 LIGFYLGGNNLNGSIPITLGKLQKLQVL 428
L + N ++ I + L KL L+ L
Sbjct: 174 LERLDISSNKVS-DISV-LAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.3 bits (85), Expect = 0.004
Identities = 38/230 (16%), Positives = 60/230 (26%), Gaps = 46/230 (20%)
Query: 123 SNLPFFESLNLSKNMFHGGIPSA-LSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYL 181
+ L L K + L T L+ RL G + L L ++
Sbjct: 15 TALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINF 69
Query: 182 SFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPA 241
S N L L V +
Sbjct: 70 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTG------------------- 110
Query: 242 EIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRL 301
+ P L NL L L N S + + +L
Sbjct: 111 -------------LTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQ--QL 155
Query: 302 ELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYL 351
N + P NL L+RL +++N ++ +S L+ L+N + L
Sbjct: 156 NFSSNQVTDLKP--LANLTTLERLDISSNKVSD----ISVLAKLTNLESL 199
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (94), Expect = 2e-04
Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 1/134 (0%)
Query: 144 SALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIF 203
+ +N R L L I L + + + S N ++ L+ +
Sbjct: 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLV 70
Query: 204 VQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL 263
+ + +L L + L +L + P T + +
Sbjct: 71 NNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHY 130
Query: 264 QSIPYVRLPNLEEL 277
+ ++P + L
Sbjct: 131 RLYVIYKVPQVRVL 144
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (90), Expect = 7e-04
Identities = 26/150 (17%), Positives = 51/150 (34%), Gaps = 9/150 (6%)
Query: 454 LSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL 513
L+ + + A + + R L L + I VI + L ++ S N +
Sbjct: 3 LTAELIEQA--AQYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEIRKLDG- 58
Query: 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFL-EYNILQGSIPDSFGDLMSLKSL 572
L+ L + + N + + DL L L ++++ D L SL L
Sbjct: 59 -FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYL 117
Query: 573 NLSNNN---LSGSIPVSLEKLSYLKDLNLS 599
+ N + K+ ++ L+
Sbjct: 118 CILRNPVTNKKHYRLYVIYKVPQVRVLDFQ 147
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (87), Expect = 0.002
Identities = 26/138 (18%), Positives = 36/138 (26%), Gaps = 6/138 (4%)
Query: 264 QSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLK 323
Q+ Y EL L G I N + ++ N F LR LK
Sbjct: 10 QAAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLK 66
Query: 324 RLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMS 383
L +NNN + + L L L L + L I
Sbjct: 67 TLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELG---DLDPLASLKSLTYLCILRNP 123
Query: 384 DCNVSGSIPEEIGNLTNL 401
N I + +
Sbjct: 124 VTNKKHYRLYVIYKVPQV 141
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (87), Expect = 0.002
Identities = 20/146 (13%), Positives = 42/146 (28%), Gaps = 14/146 (9%)
Query: 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373
+ + N + L L + + + + + ID S N I + +
Sbjct: 12 AQYTNAVRDRELDLRGYKIPVIE------NLGATLDQFDAIDFSDNEIRKLDGFPLLRR- 64
Query: 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF--- 430
LK +++ + L +L L N+L + K
Sbjct: 65 ---LKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILR 121
Query: 431 -PDNKLEGSIPDEVCRLAKVYQLDLS 455
P + + ++ +V LD
Sbjct: 122 NPVTNKKHYRLYVIYKVPQVRVLDFQ 147
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (85), Expect = 0.003
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 13/144 (9%)
Query: 288 IPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSN 347
+ NA + L+L+ I + L + ++N + L
Sbjct: 11 AAQYT-NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-------KLDGFPL 61
Query: 348 CKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLG 407
+ L+ + +++N I I + I + + + +L +L +
Sbjct: 62 LRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCIL 120
Query: 408 GNN---LNGSIPITLGKLQKLQVL 428
N + K+ +++VL
Sbjct: 121 RNPVTNKKHYRLYVIYKVPQVRVL 144
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1002 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.98 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.97 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.96 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.94 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.94 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.93 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.9 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.89 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.86 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.86 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.85 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.8 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.78 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.78 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.78 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.78 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.77 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.76 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.72 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.72 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.71 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.69 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.56 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.52 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.52 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.51 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.5 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.5 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.5 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.47 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.41 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.39 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.38 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.32 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.48 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.44 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.13 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.57 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.49 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.44 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.06 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.88 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.61 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.95 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.47 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.09 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-50 Score=432.04 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=206.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+++ ..||||+++.. .....+.+.+|++++++++|||||++++++..+. .+
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~-----~~ 79 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-----LA 79 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----CE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccE-----EE
Confidence 467999999999999999999865 36999998744 3445678999999999999999999999986543 47
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|||||++|+|.+++...+..+++..+..++.|||+||+||| +++||||||||+|||++.++.+||+|||+|+....
T Consensus 80 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~ 156 (276)
T d1uwha_ 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 156 (276)
T ss_dssp EEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC---
T ss_pred EEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeeccc
Confidence 999999999999999877777999999999999999999999 89999999999999999999999999999987765
Q ss_pred CCceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...........||+.|||||++.+ ..|+.++|||||||++|||+||+.||........ ....+. . ....
T Consensus 157 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~-~~~~~~----~---~~~~ 228 (276)
T d1uwha_ 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIFMVG----R---GYLS 228 (276)
T ss_dssp ---------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHH----H---TSCC
T ss_pred cCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH-HHHHHh----c---CCCC
Confidence 444334456689999999998764 3589999999999999999999999976432211 111000 0 0000
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
+.. ...+..+++.+.+++.+||+.+|++|||++|++++|+.+...
T Consensus 229 p~~-------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 229 PDL-------SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp CCG-------GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred Ccc-------hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 000 011233567899999999999999999999999999998864
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-50 Score=429.03 Aligned_cols=258 Identities=28% Similarity=0.402 Sum_probs=202.3
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..+.||+|+||+||+|++.+++.||||+++... ...+.+.+|++++++++|||||+++++|...+ ..++||
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~----~~~lv~ 79 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVF 79 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SCEEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCC----ceEEEE
Confidence 5688899999999999999999889999999997643 34577999999999999999999999998766 567999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++|+|.+++......+++..+..++.|||+||+||| +++|+||||||+|||+++++.+||+|||+|+.......
T Consensus 80 E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~ 156 (263)
T d1sm2a_ 80 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 156 (263)
T ss_dssp ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC----------
T ss_pred EecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCc
Confidence 999999999999887777999999999999999999999 89999999999999999999999999999987755432
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCCh
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSR 945 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 945 (1002)
. ......||+.|||||++.+..|+.++|||||||++|||+|+..|+..... ..+..... ..+...
T Consensus 157 ~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~----~~~~~~~i--------~~~~~~-- 221 (263)
T d1sm2a_ 157 T-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS----NSEVVEDI--------STGFRL-- 221 (263)
T ss_dssp ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC----HHHHHHHH--------HHTCCC--
T ss_pred e-eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC----HHHHHHHH--------HhcCCC--
Confidence 2 23446789999999999999999999999999999999996544433211 11111111 011000
Q ss_pred hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 946 EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 946 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..+..++..+.+++.+||+.+|++|||++||+++|+++.+.
T Consensus 222 -----~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es 262 (263)
T d1sm2a_ 222 -----YKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262 (263)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----CCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence 01123456789999999999999999999999999998753
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-49 Score=425.09 Aligned_cols=255 Identities=20% Similarity=0.291 Sum_probs=206.8
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~----~~~i 80 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN----IQYL 80 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETT----EEEE
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCc----eeEE
Confidence 57999999999999999999864 69999999997543 234467899999999999999999999998876 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||||++|+|.+++...+ .+++..++.++.||++||+||| +++|+||||||+|||+++++.+||+|||+|+.....
T Consensus 81 vmEy~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~ 156 (271)
T d1nvra_ 81 FLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 156 (271)
T ss_dssp EEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EEeccCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccC
Confidence 999999999999997654 5999999999999999999999 899999999999999999999999999999987655
Q ss_pred CceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.........+||+.|||||++.+..+ +.++||||+||++|||++|+.||............+ .....
T Consensus 157 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~------------~~~~~ 224 (271)
T d1nvra_ 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW------------KEKKT 224 (271)
T ss_dssp TEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH------------HTTCT
T ss_pred CccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH------------hcCCC
Confidence 44444456789999999999888776 678999999999999999999997643322211111 00000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... .....+..+.+++.+||+.||++|||++|+++|=+
T Consensus 225 ~~~------~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpw 262 (271)
T d1nvra_ 225 YLN------PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 262 (271)
T ss_dssp TST------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred CCC------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence 000 01223466789999999999999999999988743
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-49 Score=425.29 Aligned_cols=251 Identities=26% Similarity=0.325 Sum_probs=209.0
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
++|+..+.||+|+||+||+|+. .+|+.||||++........+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----~~~iv 95 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD----ELWVV 95 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EEEEE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECC----EEEEE
Confidence 4699999999999999999985 479999999998765556678999999999999999999999998876 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||||++|+|.+++... .+++.+++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 96 mEy~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~ 170 (293)
T d1yhwa1 96 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (293)
T ss_dssp EECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeecccc
Confidence 9999999999988654 4899999999999999999999 8999999999999999999999999999998875443
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||....... ......... .....
T Consensus 171 ~--~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-----~~~~~~~~~-----~~~~~- 237 (293)
T d1yhwa1 171 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-----ALYLIATNG-----TPELQ- 237 (293)
T ss_dssp C--CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHHC-----SCCCS-
T ss_pred c--cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH-----HHHHHHhCC-----CCCCC-
Confidence 2 2245679999999999999999999999999999999999999997532211 111000000 00010
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.+..++..+.+++.+||+.||++|||+.|+++|=
T Consensus 238 -------~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp 271 (293)
T d1yhwa1 238 -------NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271 (293)
T ss_dssp -------SGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCG
T ss_pred -------CcccCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 1223456789999999999999999999999874
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-49 Score=419.02 Aligned_cols=248 Identities=24% Similarity=0.332 Sum_probs=207.3
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+|+.. +|+.||+|++.+.. ....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~ 81 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT----RV 81 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----EE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC----EE
Confidence 56999999999999999999865 68999999987532 334577899999999999999999999998876 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++|||||++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+|+...
T Consensus 82 ~ivmEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~ 157 (263)
T d2j4za1 82 YLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 157 (263)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCC
T ss_pred EEEEeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecC
Confidence 79999999999999998755 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
... .....||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+... .+....
T Consensus 158 ~~~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~--------~i~~~~ 220 (263)
T d2j4za1 158 SSR----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYK--------RISRVE 220 (263)
T ss_dssp CCC----CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH--------HHHTTC
T ss_pred CCc----ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH-----HHHHH--------HHHcCC
Confidence 432 2345799999999999999999999999999999999999999975321 11111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... ++.+++.+.+++.+||++||++|||++|+++|=+
T Consensus 221 ~~~--------p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~ 257 (263)
T d2j4za1 221 FTF--------PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 257 (263)
T ss_dssp CCC--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred CCC--------CccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcC
Confidence 111 1224567889999999999999999999998743
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-49 Score=415.79 Aligned_cols=254 Identities=24% Similarity=0.403 Sum_probs=214.3
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..++||+|+||+||+|++++++.||||++++... ..+++.+|+.++++++|||||+++|+|.+.+ ..++||
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~----~~~iv~ 78 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR----PIFIIT 78 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSS----SEEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCC----ceEEEE
Confidence 57999999999999999999998889999999986543 3578999999999999999999999998765 467999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
||+++|++.+++......+++..+.+++.|||+||+||| +++|+||||||+||+++.++.+||+|||+|+.......
T Consensus 79 Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 155 (258)
T d1k2pa_ 79 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 155 (258)
T ss_dssp ECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC
T ss_pred EccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCCc
Confidence 999999999998887777999999999999999999999 89999999999999999999999999999987765433
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......||+.|+|||++.+..|+.++|||||||++|||+| |+.||......+ ... .+..+....
T Consensus 156 ~-~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~-----~~~--------~i~~~~~~~ 221 (258)
T d1k2pa_ 156 T-SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-----TAE--------HIAQGLRLY 221 (258)
T ss_dssp C-CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-----HHH--------HHHTTCCCC
T ss_pred e-eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH-----HHH--------HHHhCCCCC
Confidence 2 3345679999999999999999999999999999999998 899997643221 111 111111110
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
.+..++..+.+++.+||+.+|++|||++|++++|.+|
T Consensus 222 -------~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 222 -------RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp -------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred -------CcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 1223456789999999999999999999999999764
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-49 Score=425.84 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=208.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.|++.+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----~~~lv 87 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN----NLWIL 87 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETT----EEEEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC----eEEEE
Confidence 46888999999999999999864 68999999998776666788999999999999999999999998776 56799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||||++|+|.+++...+..+++.++..++.||++||+||| +++|+||||||+|||++.++.+||+|||+|+......
T Consensus 88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~ 164 (288)
T d2jfla1 88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 164 (288)
T ss_dssp EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH
T ss_pred EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCCc
Confidence 9999999999998776667999999999999999999999 8999999999999999999999999999997654321
Q ss_pred ceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 865 QFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
. ......||+.|||||++. ...|+.++||||+||++|||+||+.||........ + .++..
T Consensus 165 ~--~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~-~------------~~i~~ 229 (288)
T d2jfla1 165 Q--RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV-L------------LKIAK 229 (288)
T ss_dssp H--HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-H------------HHHHH
T ss_pred c--cccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH-H------------HHHHc
Confidence 1 224567999999999873 45689999999999999999999999976432211 1 11111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...... ..+..++..+.+++.+||+.||++|||++|+++|=
T Consensus 230 ~~~~~~-----~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp 270 (288)
T d2jfla1 230 SEPPTL-----AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHP 270 (288)
T ss_dssp SCCCCC-----SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred CCCCCC-----CccccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 111000 01123456789999999999999999999999873
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-49 Score=421.66 Aligned_cols=255 Identities=22% Similarity=0.395 Sum_probs=208.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..+.||+|+||+||+|++++++.||||+++... ...+.+.+|++++++++|||||++++++..+. .++||
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~-----~~iv~ 86 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 86 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----CEEEE
T ss_pred HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeeccCC-----eEEEE
Confidence 5688889999999999999999888999999997653 34577999999999999999999999986543 46999
Q ss_pred ccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 786 EYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||+++|+|.+++..... .+++..++.|+.|||+||+||| +++|+||||||+|||+++++.+||+|||+|+......
T Consensus 87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~ 163 (272)
T d1qpca_ 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (272)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCc
Confidence 99999999998765443 5899999999999999999999 8999999999999999999999999999999876543
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. .......||+.|||||++.++.|+.++|||||||++|||+||..|+...... .+... .+..+...
T Consensus 164 ~-~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~----~~~~~--------~i~~~~~~- 229 (272)
T d1qpca_ 164 Y-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN----PEVIQ--------NLERGYRM- 229 (272)
T ss_dssp E-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHH--------HHHTTCCC-
T ss_pred c-ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH----HHHHH--------HHHhcCCC-
Confidence 2 2335567899999999999889999999999999999999976665432221 11111 11111110
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
..+..++..+.+++.+||+.+|++|||++||++.|+.+-
T Consensus 230 ------~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 230 ------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence 011234567899999999999999999999999998763
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4e-49 Score=425.75 Aligned_cols=258 Identities=24% Similarity=0.385 Sum_probs=211.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|++. +|+.||||+++... ...+.+.+|++++++++|||||+++++|..++ ..++
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----~~~i 90 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFYI 90 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SCEE
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCC----eeEE
Confidence 456888899999999999999875 58899999997653 34577999999999999999999999998776 5679
Q ss_pred hhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
|||||++|+|.+++... ...+++..+..++.|||+||+||| +++|+||||||+|||+++++.+||+|||+|+....
T Consensus 91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 167 (287)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCS
T ss_pred EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccceeecCC
Confidence 99999999999998764 346899999999999999999999 89999999999999999999999999999987765
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... .......||+.|||||++.++.|+.++|||||||++|||++|..||...... .... +++....
T Consensus 168 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~----~~~~---------~~i~~~~ 233 (287)
T d1opja_ 168 DTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVY---------ELLEKDY 233 (287)
T ss_dssp SSS-EEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHH---------HHHHTTC
T ss_pred CCc-eeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH----HHHH---------HHHhcCC
Confidence 433 2335566899999999999999999999999999999999987776542221 1111 1111110
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.. ..+..++..+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 234 ~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 234 RM------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp CC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred CC------CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 00 0122345678999999999999999999999999998754
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-48 Score=423.72 Aligned_cols=258 Identities=23% Similarity=0.420 Sum_probs=199.3
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CC---cEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DG---MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..++||+|+||+||+|++. ++ ..||||++.... ....+.+.+|++++++++|||||++++++...+ .
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----~ 101 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST----P 101 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----S
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----E
Confidence 45677789999999999999864 23 358999887543 345578999999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++|||||++|+|.+++......+++.++..++.|||+||+||| +++|+||||||+|||++.++.+||+|||+|+.+
T Consensus 102 ~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~ 178 (299)
T d1jpaa_ 102 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 178 (299)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEc
Confidence 68999999999999999887777999999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCceee---eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 861 TREDQFVT---QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 861 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
........ .....||+.|||||++.++.|+.++|||||||++|||+| |+.||...... +... .
T Consensus 179 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~-----~~~~--------~ 245 (299)
T d1jpaa_ 179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-----DVIN--------A 245 (299)
T ss_dssp -----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH--------H
T ss_pred cCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH-----HHHH--------H
Confidence 65432221 233467999999999999999999999999999999998 89999764221 1111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+..+... ..+..++..+.+++.+||+.+|++|||+.||+++|+++-.
T Consensus 246 i~~~~~~-------~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 246 IEQDYRL-------PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp HHTTCCC-------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHcCCCC-------CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 1111110 0123356778999999999999999999999999998743
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-48 Score=417.35 Aligned_cols=256 Identities=23% Similarity=0.399 Sum_probs=209.5
Q ss_pred cCCCCCc-eeeccCcceEEEEEeC---CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENN-LIGRGGFGSVYKARIQ---DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|...+ +||+|+||+||+|.+. ++..||||+++... ....+.+.+|+++|++++|||||++++++..+.
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~----- 82 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA----- 82 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-----
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCe-----
Confidence 4455556 4999999999999754 45679999997653 344678999999999999999999999987543
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++|||||++|+|.+++...+..+++..+..++.|||+||+||| +++|+||||||+||+++.++.+||+|||+|+.+
T Consensus 83 ~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~ 159 (285)
T d1u59a_ 83 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 159 (285)
T ss_dssp EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhcc
Confidence 47999999999999998877777999999999999999999999 899999999999999999999999999999987
Q ss_pred cCCCceee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 861 TREDQFVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
........ .....||+.|||||++.++.++.++|||||||++|||+| |+.||...... +... .+.
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~-----~~~~--------~i~ 226 (285)
T d1u59a_ 160 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMA--------FIE 226 (285)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HHHH--------HHH
T ss_pred cccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH-----HHHH--------HHH
Confidence 65443322 234568999999999998999999999999999999998 99999764321 1111 111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.+... ..++.++..+.++|.+||+.+|++|||+.+|.+.|+.+-
T Consensus 227 ~~~~~-------~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 227 QGKRM-------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp TTCCC-------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCC-------CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 11111 112345677899999999999999999999999998765
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-48 Score=419.33 Aligned_cols=250 Identities=24% Similarity=0.336 Sum_probs=203.5
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++...+ ..
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----~~ 83 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE----KL 83 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSS----EE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECC----EE
Confidence 5799999999999999999986 479999999997532 334577899999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..++.++.|++.||+||| +++|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 84 ~ivmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~ 159 (288)
T d1uu3a_ 84 YFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 159 (288)
T ss_dssp EEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecc
Confidence 89999999999999987765 4899999999999999999999 8999999999999999999999999999999876
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +.. .++....
T Consensus 160 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~-----~~~--------~~i~~~~ 226 (288)
T d1uu3a_ 160 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY-----LIF--------QKIIKLE 226 (288)
T ss_dssp ----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH--------HHHHTTC
T ss_pred cCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH-----HHH--------HHHHcCC
Confidence 544333345567999999999999999999999999999999999999999753211 111 1111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
... +...+..+.+++.+||+.||++|||++|++++
T Consensus 227 ~~~--------p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 227 YDF--------PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp CCC--------CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred CCC--------CccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence 111 11234568899999999999999999997654
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-48 Score=416.16 Aligned_cols=255 Identities=20% Similarity=0.261 Sum_probs=193.0
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||+++... +...+.+.+|++++++++|||||++++++.+.... ..+
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~--~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT--TLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC------CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCC--EEE
Confidence 5799999999999999999986 479999999997543 33456788999999999999999999998654321 346
Q ss_pred HhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCC--CCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGY--STPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
+|||||++|+|.+++.+. +..+++..++.++.||++||+|||... ..+|+||||||+|||++.++.+||+|||+|
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a 161 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 161 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence 999999999999998653 346999999999999999999999421 235999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
+.+..... ......||+.|||||++.+..|+.++|||||||++|||+||+.||...... +.... +
T Consensus 162 ~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~-----~~~~~--------i 226 (269)
T d2java1 162 RILNHDTS--FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-----ELAGK--------I 226 (269)
T ss_dssp HHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHH--------H
T ss_pred eecccCCC--ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH-----HHHHH--------H
Confidence 88764332 224567999999999999999999999999999999999999999753221 11111 1
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..+.... .+..+++.+.+++.+||+.||++|||++|+++|
T Consensus 227 ~~~~~~~-------~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 227 REGKFRR-------IPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp HHTCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HcCCCCC-------CCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 1111110 011234678999999999999999999999876
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-48 Score=410.40 Aligned_cols=249 Identities=23% Similarity=0.330 Sum_probs=197.3
Q ss_pred CCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 709 SENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
+..++||+|+||+||+|+.. +++.||+|++... .....+.+.+|++++++++|||||++++++..........++||
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 45578999999999999865 6889999998754 23345678999999999999999999999865322222457999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeC-CCCcEEEecccccccccC
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~~ 862 (1002)
||+++|+|.+++.+.+ .+++..++.++.||++||+||| +++ |+||||||+|||++ +++.+||+|||+|+....
T Consensus 92 E~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 9999999999997765 4899999999999999999999 776 99999999999996 579999999999986543
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .....||+.|||||++.+ +|+.++||||+||++|||++|+.||....... .... .+..+..
T Consensus 168 ~~----~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~----~~~~--------~i~~~~~ 230 (270)
T d1t4ha_ 168 SF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA----QIYR--------RVTSGVK 230 (270)
T ss_dssp TS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH----HHHH--------HHTTTCC
T ss_pred Cc----cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHH----HHHH--------HHHcCCC
Confidence 32 234679999999998765 69999999999999999999999997532211 1111 1111111
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. .. .+..+++++.+++.+||++||++|||++|+++|
T Consensus 231 ~-~~-----~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 231 P-AS-----FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp C-GG-----GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred C-cc-----cCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence 0 00 112234568899999999999999999999986
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-48 Score=416.20 Aligned_cols=259 Identities=25% Similarity=0.423 Sum_probs=202.3
Q ss_pred cCCCCCceeeccCcceEEEEEeCCC-----cEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDG-----MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
+.|+..++||+|+||+||+|.++++ ..||||+++... ......+.+|++++++++|||||++++++...+
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~---- 82 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---- 82 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC----
Confidence 4688889999999999999986532 479999997543 334567899999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+.+|++.+++......+++.++..++.||+.|++||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 83 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~ 159 (283)
T d1mqba_ 83 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 159 (283)
T ss_dssp SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred ceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhc
Confidence 457999999999999998877777999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCc-eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQ-FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
+..... ........||+.|||||++.++.|+.++|||||||++|||++|..|+...... .+... .+.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~----~~~~~--------~i~ 227 (283)
T d1mqba_ 160 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMK--------AIN 227 (283)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHH--------HHH
T ss_pred ccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH----HHHHH--------HHh
Confidence 654332 22334567899999999999999999999999999999999976665442221 11111 111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
++... ..+..++..+.+++.+||+.+|++|||+.||+++|+++..
T Consensus 228 ~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~ 272 (283)
T d1mqba_ 228 DGFRL-------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 272 (283)
T ss_dssp TTCCC-------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ccCCC-------CCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence 11111 1122355678999999999999999999999999998764
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-48 Score=424.02 Aligned_cols=255 Identities=23% Similarity=0.395 Sum_probs=206.6
Q ss_pred cCCCCCceeeccCcceEEEEEeCC------CcEEEEEEeecc-cchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFNQQ-CGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
++|+..+.||+|+||+||+|++.. +..||||++... .......+.+|+.+++++ +|||||++++++...+
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-- 114 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG-- 114 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC--
Confidence 578889999999999999998542 236999998654 233456788999999998 8999999999998776
Q ss_pred hHHHHHhhccCCCCChhHhhhccC----------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN----------------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCD 835 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrD 835 (1002)
..++|||||++|+|.++++..+ ..+++..++.++.||++||+||| +++|||||
T Consensus 115 --~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRD 189 (325)
T d1rjba_ 115 --PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRD 189 (325)
T ss_dssp --SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETT
T ss_pred --eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecc
Confidence 5689999999999999997643 24788999999999999999999 89999999
Q ss_pred CCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcc
Q 037042 836 LKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNE 914 (1002)
Q Consensus 836 lkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~ 914 (1002)
|||+||+++.++.+||+|||+|+...............||+.|||||++.++.|+.++|||||||++|||+| |+.||..
T Consensus 190 lKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~ 269 (325)
T d1rjba_ 190 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 269 (325)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCC
Confidence 999999999999999999999988766555444456678999999999999999999999999999999998 8999976
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... +.. ++...... ..+..++..+.++|.+||+.+|++|||++||+++|.
T Consensus 270 ~~~~~~-~~~------------~~~~~~~~------~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 270 IPVDAN-FYK------------LIQNGFKM------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp CCCSHH-HHH------------HHHTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHHHH-HHH------------HHhcCCCC------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 432211 111 11111100 112235577999999999999999999999999995
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-48 Score=426.29 Aligned_cols=268 Identities=20% Similarity=0.265 Sum_probs=204.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++... ......+.+|+.++++++|||||+++++|...+ ..+
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~ 80 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG----EIS 80 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSS----EEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----EEE
Confidence 567999999999999999999864 78999999997653 344577899999999999999999999998876 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
+|||||++|+|.+++.+.+ .+++..++.++.|+++||.||| + ++|+||||||+|||++.++.+||+|||+|+...
T Consensus 81 iVmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 156 (322)
T d1s9ja_ 81 ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156 (322)
T ss_dssp EEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccC
Confidence 9999999999999998765 4899999999999999999999 5 489999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH---HHH--------
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN---DWL-------- 930 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~---~~~-------- 930 (1002)
... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||............... ...
T Consensus 157 ~~~----~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (322)
T d1s9ja_ 157 DSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 232 (322)
T ss_dssp HHT----C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------
T ss_pred CCc----cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccc
Confidence 432 13458999999999999999999999999999999999999999764221110000000 000
Q ss_pred -hhhhhh-cccCccCChhh--hHH--------HhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 931 -LISIMK-IVDGSLLSRED--IQF--------VAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 931 -~~~~~~-i~~~~~~~~~~--~~~--------~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
...... ..+........ ... ......+.++.+++.+||+.||++|||++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 233 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp -------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000000 00000000000 000 0001124568899999999999999999999997
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-47 Score=409.05 Aligned_cols=248 Identities=25% Similarity=0.395 Sum_probs=199.7
Q ss_pred ceeeccCcceEEEEEeC---CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
++||+|+||+||+|.+. .++.||||+++.. .....+.+.+|++++++++|||||+++++|..+. .++|||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~-----~~lvmE 87 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-----WMLVME 87 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSS-----EEEEEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCC-----EEEEEE
Confidence 57999999999999754 3568999999653 2334578999999999999999999999996543 369999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.++++..+ .+++..+..++.|||+||+||| +++|+||||||+|||++.++.+||+|||+|+.+......
T Consensus 88 ~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~ 163 (277)
T d1xbba_ 88 MAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163 (277)
T ss_dssp CCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred cCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccccc
Confidence 999999999998655 4899999999999999999999 899999999999999999999999999999877654433
Q ss_pred e-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 867 V-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 867 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...... +... .+..+...
T Consensus 164 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~-----~~~~--------~i~~~~~~- 229 (277)
T d1xbba_ 164 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTA--------MLEKGERM- 229 (277)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH--------HHHTTCCC-
T ss_pred cccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH-----HHHH--------HHHcCCCC-
Confidence 2 2345578999999999999999999999999999999998 89999763221 1111 11111111
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
..+..++..+.+++.+||+.||++|||+++|.++|+.+
T Consensus 230 ------~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 230 ------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ------CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 11223567789999999999999999999999888764
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.5e-47 Score=422.27 Aligned_cols=254 Identities=18% Similarity=0.243 Sum_probs=210.6
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++........+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----~~~i 100 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN----EMVM 100 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETT----EEEE
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----EEEE
Confidence 46799999999999999999986 479999999998766566678999999999999999999999998776 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC--CCCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG--DNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~--~~~~~kl~DfGla~~~~ 861 (1002)
|||||++|+|.+++......+++..+..++.||+.||+||| +++||||||||+|||++ .++.+||+|||+|+.+.
T Consensus 101 vmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~ 177 (350)
T d1koaa2 101 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 177 (350)
T ss_dssp EECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred EEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence 99999999999999776667999999999999999999999 89999999999999996 46889999999998876
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
..... ....||+.|||||++.+..|+.++||||+||++|||++|+.||...... +... .+....
T Consensus 178 ~~~~~---~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-----~~~~--------~i~~~~ 241 (350)
T d1koaa2 178 PKQSV---KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-----ETLR--------NVKSCD 241 (350)
T ss_dssp TTSCE---EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHTC
T ss_pred ccccc---ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHhCC
Confidence 54432 3457899999999999999999999999999999999999999753221 1111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...... ....++..+.+++.+||++||++|||++|+++|=
T Consensus 242 ~~~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp 281 (350)
T d1koaa2 242 WNMDDS----AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 281 (350)
T ss_dssp CCSCCG----GGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHST
T ss_pred CCCCcc----cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 110000 1122446788999999999999999999999983
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-47 Score=416.77 Aligned_cols=253 Identities=21% Similarity=0.282 Sum_probs=191.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.+.|+..+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|++++++++|||||++++++..++ ..+
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~ 83 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG----HLY 83 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSS----EEE
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----EEE
Confidence 467999999999999999999865 68999999997543 233466889999999999999999999998776 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~~ 859 (1002)
+|||||+||+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++ +++.+||+|||+|+.
T Consensus 84 lvmE~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~ 159 (307)
T d1a06a_ 84 LIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 159 (307)
T ss_dssp EEECCCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred EEEeccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEE
Confidence 9999999999999997654 5999999999999999999999 89999999999999994 578999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||....... .. ..+..
T Consensus 160 ~~~~~~---~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-----~~--------~~i~~ 223 (307)
T d1a06a_ 160 EDPGSV---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK-----LF--------EQILK 223 (307)
T ss_dssp ----------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HH--------HHHHT
T ss_pred ccCCCe---eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHH-----HH--------HHHhc
Confidence 654332 234579999999999999999999999999999999999999997632211 11 11111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
........ ....++..+.+++.+||++||++|||++|+++|-
T Consensus 224 ~~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 265 (307)
T d1a06a_ 224 AEYEFDSP----YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHP 265 (307)
T ss_dssp TCCCCCTT----TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred cCCCCCCc----cccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence 11111100 1123456789999999999999999999999973
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=4.3e-47 Score=420.72 Aligned_cols=253 Identities=19% Similarity=0.258 Sum_probs=210.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||+++.........+.+|++++++++|||||++++++...+ ..++
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~----~~~i 103 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY----EMVL 103 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS----EEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----EEEE
Confidence 35799999999999999999985 479999999998765555677889999999999999999999998776 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC--CCCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG--DNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~--~~~~~kl~DfGla~~~~ 861 (1002)
|||||++|+|.+++...+..+++.+++.|+.||+.||+||| +++|+||||||+|||++ .++.+||+|||+|+.+.
T Consensus 104 vmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~ 180 (352)
T d1koba_ 104 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 180 (352)
T ss_dssp EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecC
Confidence 99999999999988777667999999999999999999999 89999999999999997 67899999999999876
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
..... ....||+.|||||++.+..|+.++||||+||++|||+||+.||...... +... .+....
T Consensus 181 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~~~--------~i~~~~ 244 (352)
T d1koba_ 181 PDEIV---KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-----ETLQ--------NVKRCD 244 (352)
T ss_dssp TTSCE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHH--------HHHHCC
T ss_pred CCCce---eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHhCC
Confidence 55432 3456899999999999999999999999999999999999999753221 1111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
...... ....++..+.+++.+||++||++|||+.|+++|
T Consensus 245 ~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 245 WEFDED----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp CCCCSS----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCCcc----cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 110000 011244678899999999999999999999987
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.3e-47 Score=415.45 Aligned_cols=246 Identities=22% Similarity=0.314 Sum_probs=200.5
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++...+ ..+
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~----~~~ 91 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH----TAW 91 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----EEE
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECC----EEE
Confidence 488899999999999999985 478999999997543 234567889999999999999999999998776 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|||||++|++..++...+ .+++..++.++.||++||+||| +++|+||||||+|||++.++.+||+|||+|+....
T Consensus 92 iv~E~~~~g~l~~~~~~~~-~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (309)
T d1u5ra_ 92 LVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (309)
T ss_dssp EEEECCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EEEEecCCCchHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence 9999999999977665443 5999999999999999999999 89999999999999999999999999999986543
Q ss_pred CCceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
. ....||+.|||||++.+ +.|+.++|||||||++|||++|+.||....... . +..+..
T Consensus 168 ~------~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~----~---------~~~i~~ 228 (309)
T d1u5ra_ 168 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----A---------LYHIAQ 228 (309)
T ss_dssp B------CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----H---------HHHHHH
T ss_pred C------CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH----H---------HHHHHh
Confidence 2 34579999999998753 468999999999999999999999997532211 1 111111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
....... +..++..+.+++.+||+.||++|||++|+++|-
T Consensus 229 ~~~~~~~------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp 268 (309)
T d1u5ra_ 229 NESPALQ------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (309)
T ss_dssp SCCCCCS------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CCCCCCC------CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCH
Confidence 1111100 112346788999999999999999999999863
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-47 Score=409.27 Aligned_cols=257 Identities=23% Similarity=0.406 Sum_probs=203.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|++.+.||+|+||+||+|++++++.||||+++... ...+.+.+|+.++++++|||||++++++.+.+ .++||
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-----~~lv~ 90 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVT 90 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----CEEEE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEecCC-----eEEEE
Confidence 5789999999999999999999888899999997553 34577999999999999999999999986543 46999
Q ss_pred ccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 786 EYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||+++|+|.+++.... ..+++.+++.++.|||+||+||| +++|+||||||+|||+++++++||+|||+|+......
T Consensus 91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~ 167 (285)
T d1fmka3 91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 167 (285)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence 9999999999887643 35899999999999999999999 8899999999999999999999999999998765433
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. .......||+.|+|||++..+.++.++|||||||++|||++|..|+...... .+.... +..+...
T Consensus 168 ~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~----~~~~~~--------i~~~~~~- 233 (285)
T d1fmka3 168 Y-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQ--------VERGYRM- 233 (285)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHH--------HHTTCCC-
T ss_pred c-eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH----HHHHHH--------HHhcCCC-
Confidence 2 2334567899999999999999999999999999999999977776543222 111111 1111000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..+..++..+.+++.+||+.+|++|||+++|++.|+.+-..
T Consensus 234 ------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~ 274 (285)
T d1fmka3 234 ------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 274 (285)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred ------CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence 01223556789999999999999999999999999876543
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-46 Score=407.23 Aligned_cols=253 Identities=20% Similarity=0.291 Sum_probs=208.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc------chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC------GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++.+.+
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-- 86 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT-- 86 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--
Confidence 46799999999999999999986 479999999997532 123578999999999999999999999998876
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEec
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSD 853 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~D 853 (1002)
..++|||||++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+||+++.++ .+|++|
T Consensus 87 --~~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~D 160 (293)
T d1jksa_ 87 --DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 160 (293)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECC
T ss_pred --EEEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecc
Confidence 5689999999999999997765 4999999999999999999999 89999999999999998776 599999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+|+....... .....||+.|||||++.+..|+.++||||+||++|||++|+.||...... +..
T Consensus 161 fG~a~~~~~~~~---~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~-----~~~------- 225 (293)
T d1jksa_ 161 FGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----ETL------- 225 (293)
T ss_dssp CTTCEECTTSCB---CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH-------
T ss_pred hhhhhhcCCCcc---ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH-----HHH-------
Confidence 999987765432 24557899999999999999999999999999999999999999753221 111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..+......... ..+..++..+.+++.+||+.||++|||++|+++|=
T Consensus 226 -~~i~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 272 (293)
T d1jksa_ 226 -ANVSAVNYEFED----EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272 (293)
T ss_dssp -HHHHTTCCCCCH----HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred -HHHHhcCCCCCc----hhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 111111111111 11223456789999999999999999999999873
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.2e-47 Score=413.34 Aligned_cols=260 Identities=28% Similarity=0.466 Sum_probs=211.1
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
..++|+..+.||+|+||+||+|++. +++.||||+++.... ...+.+.+|++++++++||||++++++|...+
T Consensus 11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~- 89 (301)
T d1lufa_ 11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK- 89 (301)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-
T ss_pred CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCC-
Confidence 4567999999999999999999853 457899999976533 34577999999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-----------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEE
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN-----------------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH 833 (1002)
..++||||+++|+|.++++... ..+++..++.|+.|||.||+||| +++|||
T Consensus 90 ---~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~ivH 163 (301)
T d1lufa_ 90 ---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH 163 (301)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred ---ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeEe
Confidence 5679999999999999996532 14788999999999999999999 899999
Q ss_pred ccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCC-CCC
Q 037042 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGK-KPT 912 (1002)
Q Consensus 834 rDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~-~P~ 912 (1002)
|||||+|||++.++.+||+|||+|+.+.+.......+...||+.|+|||++.+..|+.++|||||||++|||++|. +||
T Consensus 164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~ 243 (301)
T d1lufa_ 164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 243 (301)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCC
Confidence 9999999999999999999999998776554444445667899999999999999999999999999999999986 466
Q ss_pred cccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 913 NEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... +... .+.++.... .+..++..+.+++.+||+.+|++||||.||+++|++|.+
T Consensus 244 ~~~~~~-----e~~~--------~v~~~~~~~-------~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 244 YGMAHE-----EVIY--------YVRDGNILA-------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp TTSCHH-----HHHH--------HHHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCCCHH-----HHHH--------HHHcCCCCC-------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 543221 1111 111221111 122345678999999999999999999999999999864
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=413.49 Aligned_cols=256 Identities=26% Similarity=0.421 Sum_probs=205.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCc----EEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGM----EVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|++.++||+|+||+||+|++. +|+ +||||+++.. .....+.+.+|++++++++|||||+++++|.++.
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---- 84 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 84 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS----
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----
Confidence 46999999999999999999864 444 5889988653 3345678999999999999999999999998765
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++++||+.+|+|.+++......+++..++.++.|||+||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 85 -~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~ 160 (317)
T d1xkka_ 85 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 160 (317)
T ss_dssp -EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHH
T ss_pred -eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeecccccee
Confidence 35889999999999999888778999999999999999999999 89999999999999999999999999999998
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
..............||+.|||||++.++.|+.++|||||||++|||+| |..||....... +...+.
T Consensus 161 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~--~~~~i~----------- 227 (317)
T d1xkka_ 161 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILE----------- 227 (317)
T ss_dssp TTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG--HHHHHH-----------
T ss_pred cccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH--HHHHHH-----------
Confidence 766554444455678999999999999999999999999999999999 788886542221 111111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.+... ..++.++..+.+++.+||+.+|++|||+.|++++|+++.
T Consensus 228 ~~~~~-------~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~ 271 (317)
T d1xkka_ 228 KGERL-------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 271 (317)
T ss_dssp HTCCC-------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCC-------CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence 11110 112235567899999999999999999999999998875
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=399.86 Aligned_cols=253 Identities=28% Similarity=0.417 Sum_probs=200.1
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..+.||+|+||+||+|+++ |+.||||++++.. ..+.+.+|++++++++|||||++++++.+... ..++||
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~---~~~lv~ 80 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVT 80 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEE
T ss_pred HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCC---cEEEEE
Confidence 46788899999999999999985 7899999997543 45778999999999999999999999865431 347999
Q ss_pred ccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 786 EYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||+++|+|.+++...+ ..+++..+++|+.||++||+||| +.+|+||||||+||+++.++.+|++|||+++......
T Consensus 81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~ 157 (262)
T d1byga_ 81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 157 (262)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCCC
Confidence 9999999999997653 25899999999999999999999 8999999999999999999999999999998655432
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
....+|..|+|||++.++.++.++|||||||++|||+| |+.||...... ....+ +..+...
T Consensus 158 -----~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~--~~~~~-----------i~~~~~~ 219 (262)
T d1byga_ 158 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPR-----------VEKGYKM 219 (262)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHH-----------HTTTCCC
T ss_pred -----ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH--HHHHH-----------HHcCCCC
Confidence 23457889999999998999999999999999999998 67777653222 12111 1111110
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
..+..++..+.+++.+||..||.+|||+.|++++|++++...
T Consensus 220 -------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~~ 261 (262)
T d1byga_ 220 -------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 261 (262)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -------CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhCC
Confidence 112234567899999999999999999999999999998643
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-46 Score=402.94 Aligned_cols=256 Identities=25% Similarity=0.405 Sum_probs=199.3
Q ss_pred cCCCCCceeeccCcceEEEEEeCC----CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||+||+|++.. +..||||+++... ....+.+.+|++++++++|||||++++++.++ .
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-----~ 81 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-----P 81 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----S
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----e
Confidence 578899999999999999998642 4568999986543 33457799999999999999999999998643 3
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|++.+++......+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+|||+|+..
T Consensus 82 ~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~ 158 (273)
T d1mp8a_ 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158 (273)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheec
Confidence 57999999999999998877777999999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ..+...||+.|+|||++.+..|+.++|||||||++|||++ |.+||....... ... .+..
T Consensus 159 ~~~~~~-~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~--~~~-----------~i~~ 224 (273)
T d1mp8a_ 159 EDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIG-----------RIEN 224 (273)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH-----------HHHT
T ss_pred cCCcce-eccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH--HHH-----------HHHc
Confidence 543322 2344568999999999999999999999999999999998 898987643321 111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+.... .+..++..+.+++.+||+.||++|||+.||+++|+++.+
T Consensus 225 ~~~~~-------~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 225 GERLP-------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp TCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCC-------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11110 122356779999999999999999999999999998754
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-46 Score=409.41 Aligned_cols=282 Identities=21% Similarity=0.245 Sum_probs=205.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.+|...+.||+|+||+||+|++ +|+.||||+++... ......+.|+..+++++|||||++++++...+......++||
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~-~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 3567778999999999999987 48999999997542 222233445555667899999999999987653333457999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-----CCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG-----YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|||++|+|.+++++. .+++..+.+++.|+|.||+|+|.. +.++|+||||||+|||++.++.+||+|||+++..
T Consensus 81 Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~ 158 (303)
T d1vjya_ 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence 999999999999875 389999999999999999999943 2479999999999999999999999999999887
Q ss_pred cCCCcee--eeccCCCCcccccccccCCC------CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH-HHHh
Q 037042 861 TREDQFV--TQTQTPATIGYMALEYGSEG------RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN-DWLL 931 (1002)
Q Consensus 861 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~-~~~~ 931 (1002)
....... ......||+.|||||++.+. .++.++|||||||++|||+||..||............... ....
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T d1vjya_ 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence 6543322 22456799999999987654 3688999999999999999999887543222111000000 0000
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..+.+........+.........++...+.+++.+||+.||++|||+.||+++|+++.+.
T Consensus 239 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 000011100011111111222345667899999999999999999999999999998854
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-46 Score=409.13 Aligned_cols=249 Identities=22% Similarity=0.274 Sum_probs=207.6
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|+.++++++|||||++++++.+.+ .
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----~ 79 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----R 79 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS----E
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc----c
Confidence 35799999999999999999986 479999999997542 334577889999999999999999999999877 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++|||||++|+|.+++...+. +++..++.++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+..
T Consensus 80 ~~iv~ey~~gg~L~~~~~~~~~-~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~ 155 (337)
T d1o6la_ 80 LCFVMEYANGGELFFHLSRERV-FTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EEEEEECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred cccceeccCCCchhhhhhcccC-CcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeeccccccc
Confidence 6899999999999999987654 899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +... .+...
T Consensus 156 ~~~~~--~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~-----~~~~--------~i~~~ 220 (337)
T d1o6la_ 156 ISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFE--------LILME 220 (337)
T ss_dssp CCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHC
T ss_pred ccCCc--ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH-----HHHH--------HHhcC
Confidence 54332 234567999999999999999999999999999999999999999764221 1111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTR 984 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~ 984 (1002)
.... +..++..+.+++.+||++||.+||+ ++|+++|
T Consensus 221 ~~~~--------p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 221 EIRF--------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCC--------CccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence 1111 1223456889999999999999994 8999987
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.3e-46 Score=405.20 Aligned_cols=245 Identities=23% Similarity=0.286 Sum_probs=205.1
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|+.++++++|||||++++++...+ ..
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----~~ 79 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ----QI 79 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS----EE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCC----ee
Confidence 5699999999999999999986 469999999997542 334577899999999999999999999998877 66
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++|||||+||++..++..... +++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+...
T Consensus 80 ~ivmE~~~gg~l~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~ 155 (316)
T d1fota_ 80 FMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 155 (316)
T ss_dssp EEEECCCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred eeEeeecCCcccccccccccc-ccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEec
Confidence 899999999999998877654 788889999999999999999 9999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
... ...+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +... ++....
T Consensus 156 ~~~-----~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-----~~~~--------~i~~~~ 217 (316)
T d1fota_ 156 DVT-----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-----KTYE--------KILNAE 217 (316)
T ss_dssp SCB-----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHHCC
T ss_pred ccc-----ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH-----HHHH--------HHHcCC
Confidence 432 3467999999999999999999999999999999999999999763221 1111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
... +...+..+.+++.+||..||.+|| |++|+++|
T Consensus 218 ~~~--------p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 218 LRF--------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp CCC--------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCC--------CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence 111 112345688999999999999996 89999987
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-46 Score=400.05 Aligned_cols=257 Identities=26% Similarity=0.365 Sum_probs=199.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC--C--CcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ--D--GMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
++|+..+.||+|+||+||+|+.. + +..||||++.+. .....+.+.+|++++++++|||||++++++.+..
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~--- 84 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP--- 84 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecc---
Confidence 46888999999999999999853 2 247899998754 2345678999999999999999999999997543
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++||||+++|++.+++......+++..++.++.|||+||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 85 --~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~ 159 (273)
T d1u46a_ 85 --MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159 (273)
T ss_dssp --CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred --hheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhh
Confidence 36999999999999998877667999999999999999999999 8999999999999999999999999999999
Q ss_pred cccCCCceee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 859 LLTREDQFVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 859 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
.......... .....||..|+|||++.+..++.++|||||||++|||+| |+.||...... +... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~-----~~~~--------~ 226 (273)
T d1u46a_ 160 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILH--------K 226 (273)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH--------H
T ss_pred hcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH-----HHHH--------H
Confidence 8765443322 234567889999999999999999999999999999998 89999753222 1111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
+.......+ .+..++..+.+++.+||+.||++|||++||.+.|++.+
T Consensus 227 i~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~~ 273 (273)
T d1u46a_ 227 IDKEGERLP------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273 (273)
T ss_dssp HHTSCCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred HHhCCCCCC------CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcC
Confidence 111111000 11234567899999999999999999999999998753
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-46 Score=406.50 Aligned_cols=261 Identities=23% Similarity=0.397 Sum_probs=198.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|++. +++.||||+++... ....+.+.+|..++.++ +|+|||.+++++...+.
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 367999999999999999999853 35689999997543 33456677888888877 68999999998865432
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCe
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNV 841 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NI 841 (1002)
..++|||||++|+|.++++..+ ..+++.++..++.||++||+||| +++|+||||||+||
T Consensus 92 ---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NI 165 (299)
T d1ywna1 92 ---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNI 165 (299)
T ss_dssp ---CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGE
T ss_pred ---eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccce
Confidence 3578999999999999997542 24889999999999999999999 89999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCC-CCCcccccccc
Q 037042 842 LLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGK-KPTNEIFNEGM 920 (1002)
Q Consensus 842 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~-~P~~~~~~~~~ 920 (1002)
|++.++.+||+|||+|+...............||+.|||||++.++.|+.++|||||||++|||+||. +||...... .
T Consensus 166 Ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-~ 244 (299)
T d1ywna1 166 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-E 244 (299)
T ss_dssp EECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-H
T ss_pred eECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-H
Confidence 99999999999999998776554444445567999999999999999999999999999999999975 566543221 1
Q ss_pred cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.+...+. ++... ..++.+++.+.+++.+||+.||++|||++|+++||+++-+
T Consensus 245 ~~~~~~~-----------~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 245 EFCRRLK-----------EGTRM-------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HHHHHHH-----------HTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHh-----------cCCCC-------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1111111 00000 0112345678999999999999999999999999998753
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.3e-46 Score=402.35 Aligned_cols=265 Identities=20% Similarity=0.334 Sum_probs=205.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++...+.....
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 46799999999999999999985 579999999997543 23456789999999999999999999998765432224
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||++||+|.+++...+ .+++.+++.++.||++||+||| +++|+||||||+|||++.++.++++|||.+...
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~ 161 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 161 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred EEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhh
Confidence 579999999999999987765 4899999999999999999999 899999999999999999999999999998765
Q ss_pred cCCCc-eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQ-FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... ........||+.|||||++.+..|++++||||+||++|||+||+.||...... +... ++..
T Consensus 162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~~~--------~~~~ 228 (277)
T d1o6ya_ 162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-----SVAY--------QHVR 228 (277)
T ss_dssp C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHH--------HHHH
T ss_pred ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHH-----HHHH--------HHHh
Confidence 43322 12234567999999999999999999999999999999999999999753221 1111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-CHHHHHHHHHhhcc
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-NAKEIVTRLLKIND 990 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-t~~evl~~L~~i~~ 990 (1002)
....... .....++..+.+++.+||++||++|| |++++++.|.++++
T Consensus 229 ~~~~~~~----~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n 276 (277)
T d1o6ya_ 229 EDPIPPS----ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276 (277)
T ss_dssp CCCCCGG----GTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred cCCCCCc----hhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence 1111000 01123456789999999999999999 89999999998763
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-45 Score=401.46 Aligned_cols=260 Identities=25% Similarity=0.426 Sum_probs=208.2
Q ss_pred CceeeccCcceEEEEEeCC----CcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 711 NNLIGRGGFGSVYKARIQD----GMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.++||+|+||+||+|++.+ ...||||++++. .....+.+.+|++++++++|||||+++|++...+. ..++||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~---~~~lv~ 108 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVL 108 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTT---EEEEEE
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCC---ceEEEE
Confidence 4689999999999998643 236899999753 34456789999999999999999999999865431 346999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 865 (1002)
|||++|+|.+++.......++..+++++.|+|+||.|+| +++|+||||||+|||+++++.+||+|||+++.......
T Consensus 109 E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~ 185 (311)
T d1r0pa_ 109 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 185 (311)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred EEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhcccccc
Confidence 999999999999887777889999999999999999999 89999999999999999999999999999987755432
Q ss_pred ee--eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 866 FV--TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 866 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......||+.|+|||.+..+.++.++|||||||++|||+||+.||........ ...+ +..+...
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~-~~~~-----------i~~g~~~ 253 (311)
T d1r0pa_ 186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVY-----------LLQGRRL 253 (311)
T ss_dssp CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHH-----------HHTTCCC
T ss_pred ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH-HHHH-----------HHcCCCC
Confidence 21 22345789999999999999999999999999999999998888765332211 1111 1111111
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
..+..++..+.++|.+||+.||++||++.||+++|+++......+
T Consensus 254 -------~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~ 298 (311)
T d1r0pa_ 254 -------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 298 (311)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred -------CCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhh
Confidence 011234567899999999999999999999999999998765543
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-45 Score=404.88 Aligned_cols=258 Identities=19% Similarity=0.215 Sum_probs=202.5
Q ss_pred hcCCCCCc-eeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENN-LIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~-~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|.+.. .||+|+||+||+|+. .+|+.||||+++.. ..+.+|++++.++ +|||||++++++..........
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~ 84 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 84 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence 45788764 699999999999985 57999999998643 4567899987655 8999999999986532222256
Q ss_pred HHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEeccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGIT 857 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla 857 (1002)
++|||||+||+|.+++...+ ..+++.+++.++.||+.||+||| +++|+||||||+|||++. ++.+||+|||+|
T Consensus 85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a 161 (335)
T d2ozaa1 85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161 (335)
T ss_dssp EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH---HcCCcccccccccccccccccccccccccccee
Confidence 89999999999999997653 36999999999999999999999 899999999999999975 567999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
+....... .....||+.|||||++.+..|+.++||||+||++|||+||+.||........ .... ...+
T Consensus 162 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~-~~~~--------~~~i 229 (335)
T d2ozaa1 162 KETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGM--------KTRI 229 (335)
T ss_dssp EECCCCCC---CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------------CC
T ss_pred eeccCCCc---cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH-HHHH--------HHHH
Confidence 87665432 2456799999999999999999999999999999999999999976432211 0000 0111
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.......+. .....++..+.+++.+||++||++|||+.|+++|=+
T Consensus 230 ~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~ 274 (335)
T d2ozaa1 230 RMGQYEFPN----PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 274 (335)
T ss_dssp CSCSSSCCT----THHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHH
T ss_pred hcCCCCCCC----cccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHH
Confidence 111111111 112345677999999999999999999999999844
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-45 Score=402.61 Aligned_cols=253 Identities=19% Similarity=0.273 Sum_probs=208.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||||+++.... ....+.+|++++++++|||||++++++.+.+ ..++
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~----~~~l 78 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESME----ELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETT----EEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECC----EEEE
Confidence 467999999999999999999865 689999999976533 3456889999999999999999999998776 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC--CCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD--NMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~~~ 861 (1002)
|||||+||+|.+++...+..+++.+++.++.||++||+||| +++|+||||||+|||++. .+.+||+|||+++...
T Consensus 79 vmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~ 155 (321)
T d1tkia_ 79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccc
Confidence 99999999999999877667999999999999999999999 899999999999999984 4589999999998776
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
..... ....+|+.|+|||...+..|+.++||||+||++|||++|+.||...... +. ...+....
T Consensus 156 ~~~~~---~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~-----~~--------~~~i~~~~ 219 (321)
T d1tkia_ 156 PGDNF---RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QI--------IENIMNAE 219 (321)
T ss_dssp TTCEE---EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HH--------HHHHHHTC
T ss_pred cCCcc---cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH-----HH--------HHHHHhCC
Confidence 54432 3346889999999999999999999999999999999999999764221 11 11122221
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...... ....++..+.+++.+||..||++|||+.|+++|=
T Consensus 220 ~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp 259 (321)
T d1tkia_ 220 YTFDEE----AFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp CCCCHH----HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CCCChh----hccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 111111 1123456788999999999999999999999973
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.5e-45 Score=391.94 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=204.5
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccc---------hhHHHHHHHHHHHHhcc-CCCcceeeeEEecC
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG---------RAFKSFDVECEVMKSIR-HRNIIKIISCCSIG 774 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 774 (1002)
++|+..+.||+|+||+||+|+. .+|+.||||++++... ...+.+.+|+.++++++ |||||++++++.+.
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 5799999999999999999986 4799999999975421 12356888999999997 99999999999887
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
+ ..++|||||++|+|.+++...+ .+++.+++.++.||++||+||| +++|+||||||+||+++.++.+||+||
T Consensus 83 ~----~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DF 154 (277)
T d1phka_ 83 T----FFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDF 154 (277)
T ss_dssp S----EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred c----ceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccc
Confidence 7 6689999999999999997655 5999999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccC------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGS------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
|+|+....... .....||+.|+|||++. ...++.++||||+||++|||++|+.||........
T Consensus 155 G~a~~~~~~~~---~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~-------- 223 (277)
T d1phka_ 155 GFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-------- 223 (277)
T ss_dssp TTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------
T ss_pred hheeEccCCCc---eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHH--------
Confidence 99988765432 24567999999999764 34578999999999999999999999976422110
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
...+......... .....+++++.+++.+||+++|++|||++|+++|
T Consensus 224 -----~~~i~~~~~~~~~----~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 224 -----LRMIMSGNYQFGS----PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp -----HHHHHHTCCCCCT----TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred -----HHHHHhCCCCCCC----cccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0111111111000 0112345678999999999999999999999887
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.3e-45 Score=405.62 Aligned_cols=245 Identities=20% Similarity=0.226 Sum_probs=205.0
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|++++++++|||||++++++.... ..
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~ 116 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----NL 116 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----EE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccc----cc
Confidence 57999999999999999999864 79999999997532 234567889999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+.+|+|.+++...+ .+++..++.++.||+.||.||| +++||||||||+|||++.++.+||+|||+|+.+.
T Consensus 117 ~~v~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~ 192 (350)
T d1rdqe_ 117 YMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred ccccccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeecc
Confidence 79999999999999997765 4899999999999999999999 8999999999999999999999999999998775
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
... ....||+.|||||++.+..|+.++||||+||++|||+||+.||..... ..... .+....
T Consensus 193 ~~~-----~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~~--------~i~~~~ 254 (350)
T d1rdqe_ 193 GRT-----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIYE--------KIVSGK 254 (350)
T ss_dssp SCB-----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHHCC
T ss_pred ccc-----ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH-----HHHHH--------HHhcCC
Confidence 432 345799999999999999999999999999999999999999975321 11111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
... +..++..+.+++.+||++||.+|+ |++|+++|
T Consensus 255 ~~~--------p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 255 VRF--------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp CCC--------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCC--------CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence 111 122446788999999999999994 89999987
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-45 Score=400.53 Aligned_cols=260 Identities=23% Similarity=0.383 Sum_probs=211.5
Q ss_pred cCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeecccc-hhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
++|+..++||+|+||.||+|++ .+++.||||+++.... .....+.+|+.+++++ +|||||++++++...+
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~-- 100 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG-- 100 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC--
Confidence 5788899999999999999975 2467899999976533 3456788999999999 6999999999998776
Q ss_pred hHHHHHhhccCCCCChhHhhhccC-----------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCC
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN-----------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~N 840 (1002)
..++|||||++|+|.++++... ..+++..+..++.||++|++||| +++|+||||||+|
T Consensus 101 --~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~N 175 (311)
T d1t46a_ 101 --PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARN 175 (311)
T ss_dssp --SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGG
T ss_pred --EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccccccc
Confidence 5689999999999999997643 25889999999999999999999 8999999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc
Q 037042 841 VLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM 920 (1002)
Q Consensus 841 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~ 920 (1002)
|+++.++.+|++|||+++...............||+.|+|||++.++.++.++|||||||++|||+|++.|+........
T Consensus 176 Il~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~ 255 (311)
T d1t46a_ 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255 (311)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred ccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999999987765555555667899999999999999999999999999999999995555443322222
Q ss_pred cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.+...+.. .... ..+..++..+.+++.+||++||++|||++||+++|+++-.
T Consensus 256 ~~~~~i~~------------~~~~------~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 256 KFYKMIKE------------GFRM------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp HHHHHHHH------------TCCC------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhc------------CCCC------CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 22222111 0000 0112245678999999999999999999999999987643
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-45 Score=397.63 Aligned_cols=259 Identities=28% Similarity=0.442 Sum_probs=206.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeecccc-hhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
.++|+..+.||+|+||.||+|+.. ++..||||++++... .....+.+|...+.++ +|||||+++++|.+.
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~ 91 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 91 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence 357888999999999999999743 234799999976543 3457788899999888 899999999999876
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
+ ..++||||+++|+|.+++.... ..+++.+++.++.||++||+||| +++||||||||+
T Consensus 92 ~----~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~ 164 (299)
T d1fgka_ 92 G----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAAR 164 (299)
T ss_dssp S----SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred C----eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeeccc
Confidence 6 5679999999999999997543 24899999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
|||++.++.+||+|||+++...............||+.|+|||.+.++.|+.++|||||||++|||++ |++||......
T Consensus 165 NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~ 244 (299)
T d1fgka_ 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 244 (299)
T ss_dssp GEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred ceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH
Confidence 99999999999999999998766554444566779999999999999999999999999999999998 68887653221
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+... .+.++.... .+..++..+.+++.+||+.+|++|||+.||++.|+++..
T Consensus 245 -----~~~~--------~i~~~~~~~-------~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 245 -----ELFK--------LLKEGHRMD-------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp -----HHHH--------HHHTTCCCC-------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHHH--------HHHcCCCCC-------CCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 1111 111111110 112245678999999999999999999999999998854
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-45 Score=401.03 Aligned_cols=261 Identities=23% Similarity=0.418 Sum_probs=213.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
++|+..+.||+|+||+||+|++. +++.||||+++... ......+.+|++++++++|||||++++++...+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--- 96 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--- 96 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS---
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC---
Confidence 56888899999999999999753 35789999997543 334567899999999999999999999998766
Q ss_pred HHHHHhhccCCCCChhHhhhccC---------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcE
Q 037042 779 LFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVA 849 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~ 849 (1002)
..++||||+++|+|.+++...+ ..+++..+.+++.|+|+||.||| +++|+||||||+|||+++++++
T Consensus 97 -~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~ 172 (308)
T d1p4oa_ 97 -PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 172 (308)
T ss_dssp -SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCE
T ss_pred -ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCceE
Confidence 5689999999999999987532 24688999999999999999999 8899999999999999999999
Q ss_pred EEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCC-CCCcccccccccHHHHHHH
Q 037042 850 HLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGK-KPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~-~P~~~~~~~~~~~~~~~~~ 928 (1002)
||+|||+|+.+.............||+.|+|||.+.++.++.++|||||||++|||+||+ .||.... ..++..
T Consensus 173 Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~-----~~~~~~- 246 (308)
T d1p4oa_ 173 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----NEQVLR- 246 (308)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----HHHHHH-
T ss_pred EEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC-----HHHHHH-
Confidence 999999999876655544555567899999999999999999999999999999999985 5664421 222221
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
.+.++.... .+..++..+.++|.+||+.+|++|||+.||+++|++..+..+
T Consensus 247 -------~i~~~~~~~-------~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~ 297 (308)
T d1p4oa_ 247 -------FVMEGGLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297 (308)
T ss_dssp -------HHHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred -------HHHhCCCCC-------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 122221111 112345679999999999999999999999999998766544
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-45 Score=399.73 Aligned_cols=248 Identities=21% Similarity=0.311 Sum_probs=202.5
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHH-hccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMK-SIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|++.+.||+|+||+||+|+.. +|+.||||++++.. ....+.+..|+.++. .++|||||++++++.+++ .
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~----~ 77 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE----N 77 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS----E
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC----c
Confidence 57999999999999999999864 79999999997542 233456667777665 689999999999998877 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++|||||++|+|.+++.... .+++.+++.++.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+..
T Consensus 78 ~yivmEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~ 153 (320)
T d1xjda_ 78 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 153 (320)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred eeEEEeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhc
Confidence 689999999999999998765 4889999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||...... +... .+...
T Consensus 154 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~-----~~~~--------~i~~~ 218 (320)
T d1xjda_ 154 MLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-----ELFH--------SIRMD 218 (320)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHC
T ss_pred ccccc--cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHcC
Confidence 54332 234567999999999999999999999999999999999999999753221 1111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH-HHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAK-EIVTR 984 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~-evl~~ 984 (1002)
.... +..++..+.+++.+||..||++|||+. |+++|
T Consensus 219 ~~~~--------p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 219 NPFY--------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred CCCC--------CccCCHHHHHHHHHhcccCCCCCcCHHHHHHhC
Confidence 1111 122356688999999999999999995 78765
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.1e-44 Score=401.43 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=199.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHH---HHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFD---VECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||||++.+.. ......+. .|+.+++.++|||||++++++...+
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~-- 80 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 80 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC--
Confidence 367999999999999999999865 69999999987432 11222333 3466777788999999999998876
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..++|||||++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|
T Consensus 81 --~~~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla 154 (364)
T d1omwa3 81 --KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 154 (364)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTC
T ss_pred --EEEEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeecee
Confidence 5689999999999999997765 4889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
+.+.... .....||+.|||||++.. ..|+.++||||+||++|||+||+.||........ ..... .
T Consensus 155 ~~~~~~~----~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~~~--------~ 220 (364)
T d1omwa3 155 CDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDR--------M 220 (364)
T ss_dssp EECSSSC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH--HHHHH--------H
T ss_pred eecCCCc----ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH--------h
Confidence 8776543 245679999999999865 5689999999999999999999999976432211 11100 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTR 984 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~ 984 (1002)
+....... +..++..+.+++.+||++||++||| ++|+++|
T Consensus 221 ~~~~~~~~--------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 221 TLTMAVEL--------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp SSSCCCCC--------CSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred cccCCCCC--------CCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 11111111 1123466889999999999999999 7999887
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1.6e-43 Score=389.46 Aligned_cols=296 Identities=30% Similarity=0.456 Sum_probs=263.3
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCCCCCCCC--cccccEeeCCC--CcEEEEEeCCCCCcc--ccCcccCCCCCCC
Q 037042 7 NITTDLDALHALKTHITNDPTNFFAKNWNSSISFC--NWTGVTCDVHS--HRVTALNISHLSLSG--TIPSRLGNLSSLQ 80 (1002)
Q Consensus 7 ~~~~~~~~l~~~k~~~~~~~~~~~~~~w~~~~~~c--~w~gv~c~~~~--~~v~~L~l~~~~l~~--~~p~~l~~l~~L~ 80 (1002)
|.++|++||++||+++. ||. .+ ++|..++||| .|+||+||..+ +||+.|||++++++| .+|++|++|++|+
T Consensus 3 c~~~e~~aLl~~k~~~~-~~~-~l-~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~ 79 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLG-NPT-TL-SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GG-TTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHHCC-CCC-cC-CCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcccc
Confidence 89999999999999996 454 34 4898899999 49999999754 489999999999998 5899999999999
Q ss_pred EEEccc-CCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEccc
Q 037042 81 SLFLHS-NQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSY 159 (1002)
Q Consensus 81 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 159 (1002)
+|+|++ |+++|.+|.+|++|++|++|+|++|++.+..|. .+..++.|+.+++++|.+.+.+|..+++++.|+++++++
T Consensus 80 ~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~-~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~ 158 (313)
T d1ogqa_ 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD-FLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCG-GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred ccccccccccccccccccccccccchhhhccccccccccc-cccchhhhcccccccccccccCchhhccCcccceeeccc
Confidence 999997 899999999999999999999999999975555 457899999999999999999999999999999999999
Q ss_pred ccCCCCCcccccccccc-ceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccc
Q 037042 160 NDFAGGIPKEIGNLTKL-EELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV 238 (1002)
Q Consensus 160 N~l~~~~p~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 238 (1002)
|.+++.+|..+..+.++ +.+++++|++++ ..|..++++..+ .++++.|.+.+.
T Consensus 159 n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~-------------------------~~~~~~~~l~~~-~l~l~~~~~~~~ 212 (313)
T d1ogqa_ 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTG-------------------------KIPPTFANLNLA-FVDLSRNMLEGD 212 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEE-------------------------ECCGGGGGCCCS-EEECCSSEEEEC
T ss_pred cccccccccccccccccccccccccccccc-------------------------cccccccccccc-cccccccccccc
Confidence 99999999999999886 889999999987 456666666554 699999999999
Q ss_pred cccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCcccccc
Q 037042 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGN 318 (1002)
Q Consensus 239 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 318 (1002)
+|..+..+++++.+++++|.+.+.++. +..+++|++|+|++|+++|.+|..|+++++|++|+|++|+|+|.+|. +++
T Consensus 213 ~~~~~~~~~~l~~l~~~~~~l~~~~~~--~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~ 289 (313)
T d1ogqa_ 213 ASVLFGSDKNTQKIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGN 289 (313)
T ss_dssp CGGGCCTTSCCSEEECCSSEECCBGGG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STT
T ss_pred ccccccccccccccccccccccccccc--cccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-ccc
Confidence 999999999999999999999877664 45678999999999999999999999999999999999999988884 688
Q ss_pred ccccchhcccccc-Cccc
Q 037042 319 LRNLKRLGLNNNH-LTSL 335 (1002)
Q Consensus 319 l~~L~~L~L~~N~-l~~l 335 (1002)
+++|+.+++++|+ +...
T Consensus 290 L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 290 LQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp GGGSCGGGTCSSSEEEST
T ss_pred CCCCCHHHhCCCccccCC
Confidence 9999999999997 4443
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-44 Score=395.90 Aligned_cols=256 Identities=30% Similarity=0.489 Sum_probs=202.3
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCc--EEEEEEeecc-cchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGM--EVAVKVFNQQ-CGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..++||+|+||+||+|++. +|. .||||+++.. .....+.+.+|+++++++ +|||||++++++...+ .
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~----~ 85 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----Y 85 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT----E
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC----e
Confidence 56888899999999999999865 444 4788887643 233456789999999998 7999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhcc---------------CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC
Q 037042 781 KALALEYMPHGSLEKYLYSS---------------NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~ 845 (1002)
.++||||+++|+|.++++.. ...+++..+..++.|||+||.|+| +++|+||||||+|||++.
T Consensus 86 ~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~ 162 (309)
T d1fvra_ 86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGE 162 (309)
T ss_dssp EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECG
T ss_pred eEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcC
Confidence 68999999999999999754 246899999999999999999999 899999999999999999
Q ss_pred CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCC-CCcccccccccHHH
Q 037042 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKK-PTNEIFNEGMTLKH 924 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~-P~~~~~~~~~~~~~ 924 (1002)
++.+||+|||+|+...... ......||..|+|||.+.++.|+.++|||||||++|||++|.. ||..... .+
T Consensus 163 ~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~-----~~ 234 (309)
T d1fvra_ 163 NYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AE 234 (309)
T ss_dssp GGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HH
T ss_pred CCceEEccccccccccccc---cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH-----HH
Confidence 9999999999997654322 2234568999999999999999999999999999999999765 5644211 11
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.. ..+..+... ..+..++..+.+++.+||+.||++||||+||+++|+++.+.
T Consensus 235 ~~--------~~i~~~~~~-------~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 286 (309)
T d1fvra_ 235 LY--------EKLPQGYRL-------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286 (309)
T ss_dssp HH--------HHGGGTCCC-------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HH--------HHHHhcCCC-------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11 111111111 11223456799999999999999999999999999998754
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-44 Score=392.49 Aligned_cols=274 Identities=21% Similarity=0.208 Sum_probs=203.5
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||+++... +...+.+.+|++++++++|||||++++++..++ ..+
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~----~~~ 77 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN----KLY 77 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT----EEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccccc----cee
Confidence 5799999999999999999986 579999999996543 234578899999999999999999999998876 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+.++.+..........+++..++.++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+....
T Consensus 78 iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~ 154 (298)
T d1gz8a_ 78 LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 154 (298)
T ss_dssp EEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccC
Confidence 999999765444444444557999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh--h----h
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS--I----M 935 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~----~ 935 (1002)
... ......||+.|+|||+..... ++.++||||+||++|||++|+.||....... .+........... . .
T Consensus 155 ~~~--~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 231 (298)
T d1gz8a_ 155 PVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVT 231 (298)
T ss_dssp CSB--CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGG
T ss_pred Ccc--cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHHHHHhcCCCchhhccccc
Confidence 332 234567999999999866655 5899999999999999999999997532211 1111111110000 0 0
Q ss_pred hcccCcc---CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhc
Q 037042 936 KIVDGSL---LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIN 989 (1002)
Q Consensus 936 ~i~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~ 989 (1002)
...+... ..............+..+.+++.+|+.+||++|||++|+++| ++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~ 290 (298)
T d1gz8a_ 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290 (298)
T ss_dssp GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred cccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCC
Confidence 0000000 000000000112334678999999999999999999999998 54443
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-44 Score=389.60 Aligned_cols=265 Identities=21% Similarity=0.211 Sum_probs=196.1
Q ss_pred CCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-----hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 710 ENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-----RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
..++||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++...+ ..++
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~----~~~i 77 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS----NISL 77 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT----CCEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCC----ceee
Confidence 3578999999999999854 699999999865422 12356889999999999999999999998876 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||++++++..+.... ..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 78 vmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~ 153 (299)
T d1ua2a_ 78 VFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 153 (299)
T ss_dssp EEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred hhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCC
Confidence 99999988777666543 45888899999999999999999 899999999999999999999999999999876544
Q ss_pred CceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc---
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD--- 939 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~--- 939 (1002)
.. .....+||+.|||||++... .|+.++||||+||++|||++|+.||......+ .+....+...........+
T Consensus 154 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~ 230 (299)
T d1ua2a_ 154 NR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCS 230 (299)
T ss_dssp CC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTS
T ss_pred cc--cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhc
Confidence 32 22345799999999987654 57999999999999999999999997532211 1111111110000000000
Q ss_pred ---Ccc---CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 ---GSL---LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ---~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... ........ ........+.+++.+||++||++|||++|+++|=+
T Consensus 231 ~~~~~~~~~~~~~~~~~-~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 282 (299)
T d1ua2a_ 231 LPDYVTFKSFPGIPLHH-IFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 282 (299)
T ss_dssp STTCCCCCCCCCCCHHH-HCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred cchhhhhccCCCCChHH-hcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHh
Confidence 000 00000000 11123467899999999999999999999999743
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-44 Score=386.44 Aligned_cols=241 Identities=23% Similarity=0.291 Sum_probs=196.1
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccc------hhHHHHHHHHHHHHhcc--CCCcceeeeEEecCch
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG------RAFKSFDVECEVMKSIR--HRNIIKIISCCSIGDF 776 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~ 776 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||++++... .....+.+|+.++++++ |||||++++++...+
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~- 82 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD- 82 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS-
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC-
Confidence 5799999999999999999985 4799999999875321 11234678999999986 899999999998876
Q ss_pred hhHHHHHhhccCCC-CChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEecc
Q 037042 777 KALFKALALEYMPH-GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDF 854 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~Df 854 (1002)
..++||||+.+ +++.+++.... .+++..++.++.||++||+||| +++|+||||||+|||++. ++.+||+||
T Consensus 83 ---~~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DF 155 (273)
T d1xwsa_ 83 ---SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF 155 (273)
T ss_dssp ---EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred ---eEEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECcc
Confidence 56799999976 57788876654 4899999999999999999999 899999999999999985 579999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
|+|+...... .+...||+.|||||++.+..+ +.++||||+||++|||++|+.||.....
T Consensus 156 G~a~~~~~~~----~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---------------- 215 (273)
T d1xwsa_ 156 GSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------------- 215 (273)
T ss_dssp TTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------------
T ss_pred ccceeccccc----ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH----------------
Confidence 9998654432 245679999999999877665 6779999999999999999999975210
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
+........ ..++.++.+++.+||+.||++|||++|+++|-
T Consensus 216 ---i~~~~~~~~--------~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp 256 (273)
T d1xwsa_ 216 ---IIRGQVFFR--------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 256 (273)
T ss_dssp ---HHHCCCCCS--------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred ---HhhcccCCC--------CCCCHHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence 011111111 12345688999999999999999999999873
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.1e-43 Score=384.85 Aligned_cols=268 Identities=18% Similarity=0.202 Sum_probs=200.7
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..++||+|+||+||+|+.++|+.||||+++... +...+.+.+|+.+|++++|||||++++++...+ ..++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~~i 77 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK----RLVL 77 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS----CEEE
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCC----ceeE
Confidence 5799999999999999999999899999999996542 334578899999999999999999999998877 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|+||+.++.+..+.... ..+++..+..++.||++||+||| +.+||||||||+|||++.++.+|++|||.|......
T Consensus 78 ~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~ 153 (286)
T d1ob3a_ 78 VFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (286)
T ss_dssp EEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccC
Confidence 99999876666665444 46999999999999999999999 899999999999999999999999999999876543
Q ss_pred CceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh------hhh
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS------IMK 936 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------~~~ 936 (1002)
.. ......+++.|+|||.+.+. .++.++||||+||++|||++|+.||.+....+. +........... ...
T Consensus 154 ~~--~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 230 (286)
T d1ob3a_ 154 VR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRILGTPNSKNWPNVTE 230 (286)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGG
T ss_pred cc--ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH-HHHHHHhhCCCChhhccchhh
Confidence 32 22445688999999987654 569999999999999999999999976432211 111111110000 000
Q ss_pred c---ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 937 I---VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 937 i---~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
. ...................+..+.+++.+||++||++|||++|+++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 00000000000011112234678899999999999999999999987
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-43 Score=387.63 Aligned_cols=274 Identities=21% Similarity=0.253 Sum_probs=202.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CC-CcEEEEEEeeccc--chhHHHHHHHHHHHHhc---cCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QD-GMEVAVKVFNQQC--GRAFKSFDVECEVMKSI---RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~ 776 (1002)
..++|++.+.||+|+||+||+|+. .+ ++.||||+++... ......+.+|+.+++.+ +||||+++++++.....
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 457899999999999999999986 34 6779999986532 22234566788877766 79999999998854321
Q ss_pred -hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 777 -KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 777 -~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
.....+++|||++++.+..........+++..++.++.||++||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecchh
Confidence 112457999999998887666666667899999999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
+++...... ......||+.|||||++.+..|+.++||||+||++|||++|+.||....... .+.............
T Consensus 162 ~~~~~~~~~---~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 237 (305)
T d1blxa_ 162 LARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEE 237 (305)
T ss_dssp SCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGG
T ss_pred hhhhhcccc---cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCchh
Confidence 998654332 2345679999999999999999999999999999999999999997642211 111111111000000
Q ss_pred hcccC------ccC-ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 936 KIVDG------SLL-SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 936 ~i~~~------~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..... ... .............+..+.+++.+||++||++|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 000 00000000112334668899999999999999999999998
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-42 Score=384.50 Aligned_cols=278 Identities=20% Similarity=0.199 Sum_probs=202.5
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|+++|++++||||+++++++..........+
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~ 86 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 86 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence 46799999999999999999985 579999999997543 3445678899999999999999999999876543222223
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
++++|+.+|+|.+++... .+++..++.++.||++||+||| +++||||||||+|||++.++.+||+|||+|+....
T Consensus 87 ~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~ 161 (345)
T d1pmea_ 87 YLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161 (345)
T ss_dssp EEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence 556778899999999764 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCce-eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh-----
Q 037042 863 EDQF-VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM----- 935 (1002)
Q Consensus 863 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~----- 935 (1002)
.... .......||+.|+|||++.. ..++.++||||+||++|||++|+.||........ ..............
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (345)
T d1pmea_ 162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNCI 240 (345)
T ss_dssp GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHTC
T ss_pred CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHH-HHHHhhhccCCChhhhhhh
Confidence 3221 12245679999999998744 5679999999999999999999999976432111 00000000000000
Q ss_pred ------h--cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhcc
Q 037042 936 ------K--IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIND 990 (1002)
Q Consensus 936 ------~--i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~ 990 (1002)
. ...+...... .. .........+.+++.+|++.||++|||++|+++| +++..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~ 303 (345)
T d1pmea_ 241 INLKARNYLLSLPHKNKVP-WN-RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303 (345)
T ss_dssp CCHHHHHHHHTSCCCCCCC-HH-HHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred hhhhhhcccccCCccCCCC-HH-HhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence 0 0000000000 00 0011234568899999999999999999999998 554443
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.9e-42 Score=373.63 Aligned_cols=259 Identities=20% Similarity=0.248 Sum_probs=198.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceee-eEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKII-SCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~-~~~~~~~~~~~~~~ 782 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++..... .+.+..|+++++.++|++++..+ +++..++ ..+
T Consensus 6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~----~~~ 79 (299)
T d1ckia_ 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD----YNV 79 (299)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETT----EEE
T ss_pred CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCC----EEE
Confidence 45799999999999999999986 4689999999875432 24578899999999887765555 4444444 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~~ 859 (1002)
+||||+ +|++.+.+...+..+++..+..++.|+++||+||| +++|+||||||+|||++ .+..+||+|||+|+.
T Consensus 80 ivme~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~ 155 (299)
T d1ckia_ 80 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 155 (299)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred EEEEEc-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCccee
Confidence 899999 55777777666667999999999999999999999 89999999999999986 356799999999998
Q ss_pred ccCCCce-----eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHH--HHHHHHHhh
Q 037042 860 LTREDQF-----VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLK--HWVNDWLLI 932 (1002)
Q Consensus 860 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~--~~~~~~~~~ 932 (1002)
+...... .......||+.|||||++.+..++.++|||||||++|||++|+.||........... .+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T d1ckia_ 156 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 235 (299)
T ss_dssp CBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS
T ss_pred ccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC
Confidence 7653321 122455799999999999999999999999999999999999999976433322111 110000000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
. .......++.++.+++.+||+.+|++||+++++.+.|+.+
T Consensus 236 ~---------------~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 276 (299)
T d1ckia_ 236 P---------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276 (299)
T ss_dssp C---------------HHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred C---------------hhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 0 0011123557799999999999999999999888877765
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-41 Score=372.54 Aligned_cols=276 Identities=17% Similarity=0.217 Sum_probs=198.8
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh----
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK---- 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 777 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++... .+.....+.+|+++|++++||||+++++++......
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 46799999999999999999986 47999999998644 233457788999999999999999999998664321
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
....++||||+.++.+..+.. ....++...++.++.||++||.||| +++|+||||||+|||++.++.+||+|||++
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~-~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~ 164 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 164 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCCCccchhhh-cccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeeccee
Confidence 113468999998876665544 3445889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCcee--eeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--
Q 037042 858 KLLTREDQFV--TQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI-- 932 (1002)
Q Consensus 858 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-- 932 (1002)
+......... .....+||+.|+|||++.+. .|+.++||||+||++|||++|+.||....... .... +......
T Consensus 165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~-i~~~~~~~~ 242 (318)
T d3blha1 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLAL-ISQLCGSIT 242 (318)
T ss_dssp EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH-HHHHHCCCC
T ss_pred eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHH-HHHH-HHHhcCCCC
Confidence 8765433211 22345799999999987765 68999999999999999999999997532211 0111 1111000
Q ss_pred -hh-hhc---------ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 -SI-MKI---------VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 -~~-~~i---------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+. ... ......................+.+++.+||++||++|||++|+++|=+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf 307 (318)
T d3blha1 243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307 (318)
T ss_dssp TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence 00 000 0000000111111112223456789999999999999999999999855
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-42 Score=380.71 Aligned_cols=273 Identities=21% Similarity=0.256 Sum_probs=198.1
Q ss_pred CCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALFKAL 783 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~~~l 783 (1002)
+|+..++||+|+||+||+|+.. +|+.||||++.+.... ..+|++++++++||||+++++++..... ...+.++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 5888899999999999999865 6999999999765322 2469999999999999999999865331 1224579
Q ss_pred hhccCCCCChhHhhh--ccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLY--SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~ 860 (1002)
|||||+++.+..+.+ .....+++.+++.++.||++||+||| +++|+||||||+|||++.++ .+||+|||+++.+
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~ 173 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence 999998765444332 23446999999999999999999999 99999999999999999775 8999999999877
Q ss_pred cCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH-------Hhh
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW-------LLI 932 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~-------~~~ 932 (1002)
...... ....||..|+|||.+.+ ..|+.++||||+||++|||++|+.||....... .+....... ...
T Consensus 174 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~ 249 (350)
T d1q5ka_ 174 VRGEPN---VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIRE 249 (350)
T ss_dssp CTTSCC---CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHH
T ss_pred cCCccc---ccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHH-HHHHHHHHhCCChHHhhhh
Confidence 654432 34578999999997664 568999999999999999999999997643211 111111110 000
Q ss_pred hhhhcccCccCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhcc
Q 037042 933 SIMKIVDGSLLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIND 990 (1002)
Q Consensus 933 ~~~~i~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~ 990 (1002)
......+..... ............++.+.+++.+||++||++|||+.|+++| ++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence 000000000000 0000001112234668899999999999999999999987 556654
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-42 Score=380.65 Aligned_cols=271 Identities=20% Similarity=0.239 Sum_probs=198.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|+++|++++|||||+++++|...+.. ..
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~ 96 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 96 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence 46799999999999999999985 469999999997542 33457788999999999999999999999765421 12
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+ +++|..+.+.. .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+|++|||+|+.
T Consensus 97 ~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~ 170 (346)
T d1cm8a_ 97 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 170 (346)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecc-cccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhcccccccccccccceec
Confidence 347999999 56787777543 4899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~ 936 (1002)
..... +...||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.......... ...+
T Consensus 171 ~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (346)
T d1cm8a_ 171 ADSEM-----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQ 244 (346)
T ss_dssp CCSSC-----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHH
T ss_pred cCCcc-----ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHH-HHHHHHhccCCCcHHHHh
Confidence 65432 45679999999998765 457899999999999999999999997642211 111111100000 0000
Q ss_pred cc-----------cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhc
Q 037042 937 IV-----------DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIN 989 (1002)
Q Consensus 937 i~-----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~ 989 (1002)
.. .+....... . .........+.+++.+||..||++|||++|+++| ++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 245 RLQSDEAKNYMKGLPELEKKDF-A-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCG-G-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhcchhhhhhhccCCcccccch-H-HhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 00 000000000 0 0011234568899999999999999999999998 55554
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.5e-41 Score=366.45 Aligned_cols=262 Identities=15% Similarity=0.146 Sum_probs=205.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccC-CCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH-RNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+|+++++.++| +||+.+++++..+. ..+
T Consensus 4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~----~~~ 77 (293)
T d1csna_ 4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL----HNV 77 (293)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT----EEE
T ss_pred CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCC----ccE
Confidence 357999999999999999999854 689999999865432 2456789999999975 89999999988766 557
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-----CCcEEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-----NMVAHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DfGla 857 (1002)
+||||+ +|+|.+++...+..++...+..++.|++.||+||| +++|+||||||+|||++. ++.+||+|||+|
T Consensus 78 ~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a 153 (293)
T d1csna_ 78 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 153 (293)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEccccee
Confidence 999999 68999999877777999999999999999999999 999999999999999974 578999999999
Q ss_pred ccccCCCce-----eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 858 KLLTREDQF-----VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 858 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
+.+...... .......||+.|||||++.+..+++++|||||||++|||+||+.||........ ..........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~--~~~~~~i~~~ 231 (293)
T d1csna_ 154 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYERIGEK 231 (293)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHHHHHHH
T ss_pred EEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH--HHHHHHHHhc
Confidence 876543211 122345799999999999999999999999999999999999999975433211 1111100000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.. ... .. .....+++++.+++..|+..+|++||+++.+.+.|+++-
T Consensus 232 ~~--------~~~--~~-~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~ 277 (293)
T d1csna_ 232 KQ--------STP--LR-ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 277 (293)
T ss_dssp HH--------HSC--HH-HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred cC--------CCC--hH-HhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 00 000 00 011224567899999999999999999999988887754
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-41 Score=368.38 Aligned_cols=269 Identities=19% Similarity=0.201 Sum_probs=204.7
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ......+.+|+.++++++||||+++++++...+ ..+
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~----~~~ 77 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK----KLT 77 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----EEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccccc----cee
Confidence 5799999999999999999986 478999999997543 345678899999999999999999999998877 557
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|+|++.++++..++...+ .+++..+..++.|+++||+||| +++|+||||||+|||++.++.+||+|||.|+....
T Consensus 78 iv~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~ 153 (292)
T d1unla_ 78 LVFEFCDQDLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EEEECCSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEeeecccccccccccccc-ccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccC
Confidence 8999999999888776554 5889999999999999999999 89999999999999999999999999999987765
Q ss_pred CCceeeeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh------hh
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS------IM 935 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------~~ 935 (1002)
.... .....++..|+|||++.... ++.++||||+||++|||++|+.||..................... ..
T Consensus 154 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (292)
T d1unla_ 154 PVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CCSC--CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred CCcc--ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhh
Confidence 4332 23445788899999877655 689999999999999999999997553222221111111111000 00
Q ss_pred hcccCcc---CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 936 KIVDGSL---LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 936 ~i~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
+..+... .................+.+++.+|+++||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000 000000000112334568899999999999999999999987
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3e-41 Score=373.17 Aligned_cols=265 Identities=17% Similarity=0.212 Sum_probs=199.8
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|++.++||+|+||+||+|+. .+|+.||||+++.. ..+.+.+|+++|+++. ||||+++++++...... ..++
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~--~~~~ 109 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSR--TPAL 109 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC--SEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCC--ceeE
Confidence 5799999999999999999986 47999999999754 2467889999999995 99999999998754322 4568
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~ 862 (1002)
||||+++|+|..+.+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++ .+||+|||+|+....
T Consensus 110 v~e~~~~~~L~~~~~----~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~ 182 (328)
T d3bqca1 110 VFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 182 (328)
T ss_dssp EEECCCSCBGGGTTT----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred EEeecCCCcHHHHhc----CCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccC
Confidence 999999999987653 4899999999999999999999 99999999999999998654 699999999987665
Q ss_pred CCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH--------Hhh-
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW--------LLI- 932 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~--------~~~- 932 (1002)
... .....+|+.|+|||...+. .++.++||||+||++|||++|+.||................. ...
T Consensus 183 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 259 (328)
T d3bqca1 183 GQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259 (328)
T ss_dssp TCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc---ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhc
Confidence 432 2456789999999987665 479999999999999999999999976433221111111100 000
Q ss_pred h------hhhcccCc--cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 933 S------IMKIVDGS--LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 933 ~------~~~i~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
. ........ ...............+.++.+++.+||.+||++|||++|+++|=
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp 320 (328)
T d3bqca1 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 320 (328)
T ss_dssp TCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 0 00000000 00000011111223456789999999999999999999999873
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-41 Score=372.72 Aligned_cols=253 Identities=22% Similarity=0.292 Sum_probs=201.5
Q ss_pred cCCCCCceeeccCcceEEEEEe----CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhccC-CCcceeeeEEecCch
Q 037042 706 DGFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSIRH-RNIIKIISCCSIGDF 776 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~ 776 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|++++++++| |||+++++++....
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~- 102 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET- 102 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC-
Confidence 5699999999999999999974 248899999986432 2335668889999999977 89999999998776
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++||||+.+|+|.+++...+. .....+..++.||+.|++|+| +++|+||||||+||+++.++.+||+|||+
T Consensus 103 ---~~~~v~e~~~~~~L~~~i~~~~~-~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~ 175 (322)
T d1vzoa_ 103 ---KLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 175 (322)
T ss_dssp ---EEEEEECCCCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred ---ceeeeeecccccHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccc
Confidence 56799999999999999987764 678889999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCC--CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEG--RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
|+.+...... ......|++.|+|||.+.+. .++.++||||+||++|||++|+.||........ ...........
T Consensus 176 a~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~~~i~~~~~~~-- 251 (322)
T d1vzoa_ 176 SKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKS-- 251 (322)
T ss_dssp EEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHC--
T ss_pred hhhhcccccc-cccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcccC--
Confidence 9876543322 22345789999999987654 468899999999999999999999977543322 22211111110
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTR 984 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~ 984 (1002)
... .+..++..+.+++.+||.++|++|| |++|+++|
T Consensus 252 ------~~~--------~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 252 ------EPP--------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp ------CCC--------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ------CCC--------CcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 000 1123457789999999999999999 58999987
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-40 Score=372.24 Aligned_cols=269 Identities=19% Similarity=0.162 Sum_probs=192.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~ 780 (1002)
++|++.++||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|+.++++++|||||++++++...+. ....
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 57999999999999999999865 69999999997543 3345678899999999999999999999875432 1125
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.|+||||+.++.+. .+.. .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+|++|||+++..
T Consensus 97 ~~iv~Ey~~~~l~~-~~~~---~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~ 169 (355)
T d2b1pa1 97 VYLVMELMDANLCQ-VIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_dssp EEEEEECCSEEHHH-HHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred eEEEEeccchHHHH-hhhc---CCCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhhhhcc
Confidence 57999999775544 4432 4789999999999999999999 899999999999999999999999999998866
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh--------h
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL--------I 932 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~--------~ 932 (1002)
.... ......+|+.|+|||++.+..++.++||||+||+++||++|+.||....... ........... .
T Consensus 170 ~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 245 (355)
T d2b1pa1 170 GTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_dssp --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHTTS
T ss_pred cccc---ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHH-HHHHHHHhccCCCHHHHHHh
Confidence 5433 2245578999999999999999999999999999999999999996532111 11111100000 0
Q ss_pred --hhhhcccCccCC------------hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 933 --SIMKIVDGSLLS------------REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 933 --~~~~i~~~~~~~------------~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
............ ............+..+.+++.+|+.+||++|||++|+++|=
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hp 312 (355)
T d2b1pa1 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312 (355)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCc
Confidence 000000000000 00001112334567899999999999999999999999884
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-40 Score=370.67 Aligned_cols=272 Identities=19% Similarity=0.242 Sum_probs=199.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch-hhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF-KALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 780 (1002)
.++|++.++||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++..... ....
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 56899999999999999999985 579999999997543 2345678899999999999999999999865431 1112
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++|++|+.+|+|.+++... .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+|++|||+|...
T Consensus 97 ~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~ 171 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 171 (348)
T ss_dssp CCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred eEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccchhccc
Confidence 35678888999999999654 4899999999999999999999 899999999999999999999999999999765
Q ss_pred cCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hhhh-
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SIMK- 936 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~- 936 (1002)
.... ....||..|+|||+..+. .++.++||||+||++|||++|+.||........ ........... ....
T Consensus 172 ~~~~-----~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~-~~~i~~~~~~~~~~~~~~ 245 (348)
T d2gfsa1 172 DDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLVGTPGAELLKK 245 (348)
T ss_dssp TGGG-----SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHTT
T ss_pred Cccc-----ccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChHHhhh
Confidence 4322 346789999999986665 468999999999999999999999975322110 11111100000 0000
Q ss_pred --------ccc--CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhc
Q 037042 937 --------IVD--GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIN 989 (1002)
Q Consensus 937 --------i~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~ 989 (1002)
... ....... .. .........+.+++.+|+..||.+|||++|+++| +.++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~ 308 (348)
T d2gfsa1 246 ISSESARNYIQSLTQMPKMN-FA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308 (348)
T ss_dssp CCCHHHHHHHTTSCCCCCCC-HH-HHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred ccchhhhhhhhhcccCCCcc-hh-hhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence 000 0000000 00 0011234668899999999999999999999997 44443
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.7e-37 Score=342.33 Aligned_cols=268 Identities=15% Similarity=0.149 Sum_probs=188.8
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-----------CCCcceeeeEEecC
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-----------HRNIIKIISCCSIG 774 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~~ 774 (1002)
+|++.++||+|+||+||+|+. .+|+.||||++++.. ...+.+.+|+.+++.++ |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 599999999999999999986 579999999998653 33467788999888875 57899999988654
Q ss_pred chhhHHHHHhhccCCCCCh--hHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-----
Q 037042 775 DFKALFKALALEYMPHGSL--EKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----- 847 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L--~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----- 847 (1002)
... ..++|++++..+.. ...........++..+..++.||+.|++|||+ ..+|+||||||+|||++.++
T Consensus 93 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~ 168 (362)
T d1q8ya_ 93 GPN--GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENL 168 (362)
T ss_dssp ETT--EEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTE
T ss_pred ccc--ceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCccccc
Confidence 422 22345555544433 22233334468889999999999999999993 38899999999999998654
Q ss_pred -cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc-c----c
Q 037042 848 -VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG-M----T 921 (1002)
Q Consensus 848 -~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~-~----~ 921 (1002)
.+|++|||.|....... ....||+.|+|||+..+..|+.++||||+||+++||++|+.||....... . .
T Consensus 169 ~~~kl~dfg~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~ 243 (362)
T d1q8ya_ 169 IQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 243 (362)
T ss_dssp EEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred ceeeEeeccccccccccc-----ccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHH
Confidence 49999999997654322 34579999999999999999999999999999999999999997532211 0 0
Q ss_pred HHHHHHHHH-------hh--hhhhccc---------C-ccCChhh---hHHHhHHHHHHHHHHHHhHccccCCCCCCCHH
Q 037042 922 LKHWVNDWL-------LI--SIMKIVD---------G-SLLSRED---IQFVAKEQCMSFVFNMAMECTVESPEKRINAK 979 (1002)
Q Consensus 922 ~~~~~~~~~-------~~--~~~~i~~---------~-~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 979 (1002)
+...+.... .. ......+ . ....... ............+.+++.+|+.+||++|||++
T Consensus 244 ~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~ 323 (362)
T d1q8ya_ 244 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 323 (362)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHH
Confidence 111111000 00 0000000 0 0000000 01112345677899999999999999999999
Q ss_pred HHHHH
Q 037042 980 EIVTR 984 (1002)
Q Consensus 980 evl~~ 984 (1002)
|+++|
T Consensus 324 e~L~H 328 (362)
T d1q8ya_ 324 GLVNH 328 (362)
T ss_dssp HHHTC
T ss_pred HHhcC
Confidence 99998
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.98 E-value=3.4e-33 Score=306.48 Aligned_cols=259 Identities=35% Similarity=0.630 Sum_probs=241.0
Q ss_pred cccEEecCCCCCCC--CCCcccCCCCCccEEEccC-CccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEE
Q 037042 376 SLKIFDMSDCNVSG--SIPEEIGNLTNLIGFYLGG-NNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQL 452 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 452 (1002)
+++.|+|++|++++ .+|..++++++|++|+|++ |+++|.+|.+|+++++|++|+|++|++.+..+..+..+.+|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 47778888888877 4789999999999999987 89999999999999999999999999999999999999999999
Q ss_pred EccCCcCCccCCccccCCccCcccccccccccccCCccccccccC-ceeeccCCCCCCCCcccccccccceeeeCCCCcc
Q 037042 453 DLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDI-LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531 (1002)
Q Consensus 453 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 531 (1002)
++++|++.+.+|..+++++.|+.+++++|.+.+.+|..+..+.++ +.+++++|++++..|..+..+..+ .+++++|.+
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~ 209 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEE
T ss_pred ccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 999999999999999999999999999999999999999998886 899999999999999988887665 699999999
Q ss_pred CccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCCC
Q 037042 532 SGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKGG 611 (1002)
Q Consensus 532 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 611 (1002)
.+.+|..+..+++|+.|++++|.+.+.+| .++.+++|+.|+|++|+|+|.+|..|.++++|++|||++|+|+|.+|..+
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~ 288 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcc
Confidence 99999999999999999999999997665 68899999999999999999999999999999999999999999999988
Q ss_pred CCCCCccccccCCCCCCCCCCCCCCCCC
Q 037042 612 SFGNFSAESFEGNKLLCGSPNLHVPPCK 639 (1002)
Q Consensus 612 ~~~~~~~~~~~~n~~~c~~~~~~~~pc~ 639 (1002)
.+.++....+.||+.+||.| +|+|.
T Consensus 289 ~L~~L~~l~l~~N~~l~g~p---lp~c~ 313 (313)
T d1ogqa_ 289 NLQRFDVSAYANNKCLCGSP---LPACT 313 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTT---SSCCC
T ss_pred cCCCCCHHHhCCCccccCCC---CCCCC
Confidence 88999999999999999987 45663
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.97 E-value=2.5e-29 Score=284.02 Aligned_cols=125 Identities=21% Similarity=0.304 Sum_probs=69.2
Q ss_pred ccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCc
Q 037042 419 LGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498 (1002)
Q Consensus 419 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 498 (1002)
+..+++|++|++++|++++.. .+..+..++.++++.|.+++. ..+..+++++.|++++|+++++. .+..+++|+
T Consensus 259 ~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~ 332 (384)
T d2omza2 259 LSGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQ 332 (384)
T ss_dssp GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCC
T ss_pred ccccccCCEeeccCcccCCCC--ccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCC
Confidence 333444444444444444221 133444455555555555431 23455555556666666655542 255566666
Q ss_pred eeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCe
Q 037042 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYN 553 (1002)
Q Consensus 499 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 553 (1002)
+|++++|++++ ++ .++++++|++|++++|+|++.+| +.++++|+.|+|++|
T Consensus 333 ~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 333 RLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp EEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred EEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 66666666664 22 46666677777777777766543 667777777777776
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.96 E-value=6.1e-29 Score=280.81 Aligned_cols=166 Identities=29% Similarity=0.438 Sum_probs=119.2
Q ss_pred CCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccc
Q 037042 398 LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLS 477 (1002)
Q Consensus 398 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 477 (1002)
+++|+.|++++|+++.. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|++++.. .+..++.++.++
T Consensus 218 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~ 291 (384)
T d2omza2 218 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLE 291 (384)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEE
T ss_pred cCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--cccccccccccc
Confidence 34555555555555532 346667777777777777775432 667778888888888887543 366777788888
Q ss_pred cccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecc
Q 037042 478 LASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 478 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 557 (1002)
++.|.+.+. ..+..+++++.|++++|++++.. .+..+++|++|++++|+|+++ + .|+++++|++|+|++|+|++
T Consensus 292 ~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~l-~-~l~~l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 292 LNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSDV-S-SLANLTNINWLSAGHNQISD 365 (384)
T ss_dssp CCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECCSSCCCB
T ss_pred ccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCCC-h-hHcCCCCCCEEECCCCcCCC
Confidence 888887763 34777788888888888887643 377788888888888888753 3 57888888888888888886
Q ss_pred cCCcccccccccceeccccc
Q 037042 558 SIPDSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 558 ~~p~~~~~l~~L~~L~Ls~N 577 (1002)
.+| +.++++|+.|+|++|
T Consensus 366 l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 366 LTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CGG--GTTCTTCSEEECCCE
T ss_pred Chh--hccCCCCCEeeCCCC
Confidence 554 778888888888877
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=1.8e-26 Score=251.47 Aligned_cols=252 Identities=25% Similarity=0.325 Sum_probs=167.8
Q ss_pred CCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccc
Q 037042 37 SISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGE 116 (1002)
Q Consensus 37 ~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 116 (1002)
..+-|.|++|.|.. ++++ .+|+.+. +++++|+|++|+|+...+.+|.++++|++|++++|.+. .
T Consensus 6 ~~c~c~~~~~~C~~------------~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~-~ 69 (305)
T d1xkua_ 6 FRCQCHLRVVQCSD------------LGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-K 69 (305)
T ss_dssp TTCEEETTEEECTT------------SCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC-C
T ss_pred CCCEecCCEEEecC------------CCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhcccccccccccccccc-c
Confidence 33447788887763 4565 6777664 68889999999888544457888888888888888887 4
Q ss_pred cCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhH
Q 037042 117 IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQ 196 (1002)
Q Consensus 117 ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 196 (1002)
++...|.++++|++|++++|+++ .+|..+. ..|+.|++++|.+.+..+..+.....++.++...|.....
T Consensus 70 i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~~--~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~------- 139 (305)
T d1xkua_ 70 ISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS------- 139 (305)
T ss_dssp BCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGG-------
T ss_pred cchhhhhCCCccCEecccCCccC-cCccchh--hhhhhhhccccchhhhhhhhhhcccccccccccccccccc-------
Confidence 55555677788888888888777 4554332 4677777777777765555566666667777666654321
Q ss_pred HhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccch
Q 037042 197 IFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEE 276 (1002)
Q Consensus 197 ~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 276 (1002)
...+..+..+++|+++++++|+++. +|.. .+++|++
T Consensus 140 ----------------~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~---------------------------~~~~L~~ 175 (305)
T d1xkua_ 140 ----------------GIENGAFQGMKKLSYIRIADTNITT-IPQG---------------------------LPPSLTE 175 (305)
T ss_dssp ----------------GBCTTGGGGCTTCCEEECCSSCCCS-CCSS---------------------------CCTTCSE
T ss_pred ----------------CCCccccccccccCccccccCCccc-cCcc---------------------------cCCccCE
Confidence 0233445556666666666666553 2221 2345666
Q ss_pred hhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeC
Q 037042 277 LYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDL 356 (1002)
Q Consensus 277 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~L 356 (1002)
|++++|.+++..+..|.+++.++.|++++|.++++.+.+|.++++|++|+|++|+|+.+|.. |..+++|++|+|
T Consensus 176 L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~------l~~l~~L~~L~L 249 (305)
T d1xkua_ 176 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGG------LADHKYIQVVYL 249 (305)
T ss_dssp EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTT------TTTCSSCCEEEC
T ss_pred EECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccccccc------cccccCCCEEEC
Confidence 66666666666666777777777777777777777777777777777777777777776532 566677777777
Q ss_pred CCCCCCCc
Q 037042 357 SSNSIDGI 364 (1002)
Q Consensus 357 s~N~l~~~ 364 (1002)
++|+|+.+
T Consensus 250 s~N~i~~i 257 (305)
T d1xkua_ 250 HNNNISAI 257 (305)
T ss_dssp CSSCCCCC
T ss_pred CCCccCcc
Confidence 77776654
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=4e-26 Score=248.77 Aligned_cols=265 Identities=23% Similarity=0.255 Sum_probs=144.5
Q ss_pred cceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccc
Q 037042 249 IQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLN 328 (1002)
Q Consensus 249 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 328 (1002)
.+.++-++++++..++.+ .+++++|+|++|+|+...+..|.++++|++|++++|.+..+.|..|.++++|++|+++
T Consensus 12 ~~~~~C~~~~L~~lP~~l----~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 12 LRVVQCSDLGLEKVPKDL----PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp TTEEECTTSCCCSCCCSC----CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCCccCCCC----CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 445555555554222111 1345555555555554444445555555555555555555555555555555555555
Q ss_pred cccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccC
Q 037042 329 NNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGG 408 (1002)
Q Consensus 329 ~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 408 (1002)
+|+|+.+|.. .... +..|++++|.+.+..+..+.....+..++...
T Consensus 88 ~n~l~~l~~~--------~~~~--------------------------l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~ 133 (305)
T d1xkua_ 88 KNQLKELPEK--------MPKT--------------------------LQELRVHENEITKVRKSVFNGLNQMIVVELGT 133 (305)
T ss_dssp SSCCSBCCSS--------CCTT--------------------------CCEEECCSSCCCBBCHHHHTTCTTCCEEECCS
T ss_pred CCccCcCccc--------hhhh--------------------------hhhhhccccchhhhhhhhhhcccccccccccc
Confidence 5555554421 1123 44444444444444444455555566666665
Q ss_pred CccC--ccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCccccccccccccc
Q 037042 409 NNLN--GSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISV 486 (1002)
Q Consensus 409 N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 486 (1002)
|... ...+..+..+++|+.+++++|.++ .+|..+ .++|+.|++++|.+++..+..|..++.++.|++++|.+.++
T Consensus 134 n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~ 210 (305)
T d1xkua_ 134 NPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 210 (305)
T ss_dssp SCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred ccccccCCCccccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhcccccccccccccccccc
Confidence 5432 333455666666777777776665 333332 35666666666666666666666666666666666666666
Q ss_pred CCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCccccc------CCccccEEEccCeee
Q 037042 487 IPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIG------GIKDLQFLFLEYNIL 555 (1002)
Q Consensus 487 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------~l~~L~~L~Ls~N~l 555 (1002)
.+..|.++++|++|+|++|+|+. +|..|..+++|+.|+|++|+|+.+....|. .+.+|+.|+|++|.+
T Consensus 211 ~~~~~~~l~~L~~L~L~~N~L~~-lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 211 DNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp CTTTGGGSTTCCEEECCSSCCSS-CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred ccccccccccceeeecccccccc-cccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcC
Confidence 66666666666666666666663 455666666666666666666644333332 334444455555544
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=4.5e-26 Score=245.39 Aligned_cols=227 Identities=27% Similarity=0.309 Sum_probs=174.3
Q ss_pred EecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEcc-CCc
Q 037042 380 FDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS-NNK 458 (1002)
Q Consensus 380 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls-~N~ 458 (1002)
++.++++++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|++++|++.+..+..+..+..+..++.. .|.
T Consensus 16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 344444544 3444332 456777777777776666677777777788887777777777777777777777654 566
Q ss_pred CCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCccc
Q 037042 459 LSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNA 538 (1002)
Q Consensus 459 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 538 (1002)
++...+..|.++++|++|++++|.+..+.+..+....+|+.+++++|+++++.+..|..+++|+.|++++|+|+++.+.+
T Consensus 93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~ 172 (284)
T d1ozna_ 93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERA 172 (284)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred cccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhh
Confidence 66666777888888888888888887777777778888888888888888777777888888888888888888888888
Q ss_pred ccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCC
Q 037042 539 IGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 539 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
|.++++|+.+++++|++++..|..|..+++|++|++++|++++..|..|..+++|++|+|++|++.+..+.
T Consensus 173 f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~ 243 (284)
T d1ozna_ 173 FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (284)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred hccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCccc
Confidence 88888888888888888888888888888888888888888887778888888888888888888876553
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.9e-25 Score=240.40 Aligned_cols=205 Identities=22% Similarity=0.240 Sum_probs=108.0
Q ss_pred ccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEcc-CCcccccCCccccCCccccEEEcc
Q 037042 377 LKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP-DNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~-~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
+++|+|++|+|++..+..|.++++|++|++++|++..+.+..+..+..++.++.. .|.++...+..|.++++|++|+++
T Consensus 34 ~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~ 113 (284)
T d1ozna_ 34 SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLD 113 (284)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECT
T ss_pred CCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEecC
Confidence 3444444444443333445555555555555555555555555555555555432 344444444455555555555555
Q ss_pred CCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccC
Q 037042 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVI 535 (1002)
Q Consensus 456 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 535 (1002)
+|.+....+..+...++|+.+++++|+|+++.+..|..+++|+.|++++|++++..+..|.++++|+.+++++|+++++.
T Consensus 114 ~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~ 193 (284)
T d1ozna_ 114 RCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 193 (284)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccC
Confidence 55555444445555555555555555555554555555555555555555555544555555555555555555555555
Q ss_pred cccccCCccccEEEccCeeecccCCcccccccccceeccccccccC
Q 037042 536 PNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 536 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 581 (1002)
|..|.++++|++|++++|.+.+..|..|+.+++|+.|+|++|++.+
T Consensus 194 ~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 194 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred hhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 5555555555555555555555555555555555555555555553
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=9.9e-24 Score=224.31 Aligned_cols=201 Identities=23% Similarity=0.206 Sum_probs=136.1
Q ss_pred CCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCccccc
Q 037042 399 TNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSL 478 (1002)
Q Consensus 399 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 478 (1002)
..+.+.+.++++|+ .+|..+. +++++|+|++|+|++..+..|.++++|++|+|++|+|+.. | .++.+++|+.|+|
T Consensus 10 ~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~L 84 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTLDL 84 (266)
T ss_dssp TTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEEEC
T ss_pred CCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-ccccccccccccc
Confidence 34444555555555 2344332 3556666666666655555566666666666666666532 2 2455666666666
Q ss_pred ccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeeccc
Q 037042 479 ASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGS 558 (1002)
Q Consensus 479 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 558 (1002)
++|+++.. +..+.++++|++|++++|.+.+..+..+..+.+++.|++++|.+++..+..+..+++|+.|++++|+|++.
T Consensus 85 s~N~l~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~ 163 (266)
T d1p9ag_ 85 SHNQLQSL-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (266)
T ss_dssp CSSCCSSC-CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred cccccccc-ccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccccccc
Confidence 66666543 45666677777777777777766666677777777777777777777777777777888888888888777
Q ss_pred CCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCccc
Q 037042 559 IPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606 (1002)
Q Consensus 559 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 606 (1002)
.+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|.+.
T Consensus 164 ~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~Cd 210 (266)
T d1p9ag_ 164 PAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (266)
T ss_dssp CTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCCC
Confidence 7777777888888888888887 6777777778888888888887653
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=5.9e-23 Score=218.23 Aligned_cols=178 Identities=25% Similarity=0.232 Sum_probs=119.1
Q ss_pred CccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccc
Q 037042 400 NLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLA 479 (1002)
Q Consensus 400 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 479 (1002)
++++|+|++|+|+++.+..|.++++|++|+|++|+|+. +| .+..+++|+.|+|++|++++ .+..+..+++|+.|+++
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108 (266)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECC
T ss_pred CCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccccccccccccc-ccccccccccccccccc
Confidence 45566666666655555556666666666666666653 22 23456666666666666663 35556666667777777
Q ss_pred cccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccC
Q 037042 480 SNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSI 559 (1002)
Q Consensus 480 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 559 (1002)
+|.+.++.+..+..+.++++|++++|.++...+..+..++.|+.+++++|+|++..+..|..+++|++|+|++|+|+ .+
T Consensus 109 ~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~l 187 (266)
T d1p9ag_ 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI 187 (266)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred ccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-cc
Confidence 77766666666667777777777777777666666677777777777777777777777777777777777777777 56
Q ss_pred CcccccccccceeccccccccC
Q 037042 560 PDSFGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 560 p~~~~~l~~L~~L~Ls~N~l~~ 581 (1002)
|..+..+++|+.|+|++|.+..
T Consensus 188 p~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 188 PKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp CTTTTTTCCCSEEECCSCCBCC
T ss_pred ChhHCCCCCCCEEEecCCCCCC
Confidence 6666677777777777777653
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.86 E-value=3.2e-20 Score=205.73 Aligned_cols=138 Identities=27% Similarity=0.408 Sum_probs=93.5
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
+++.|||++++++ .+|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++. + .+.|++|+|
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~-l---p~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSD-L---PPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCS-C---CTTCCEEEC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhh-h---ccccccccc
Confidence 4678999999987 57754 467888899999988 778654 56788888888886 4442 1 245788888
Q ss_pred CCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccC
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKC 213 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~ 213 (1002)
++|.++ .+|. ++++++|++|++++|.++ ..|..+ ..+..+.+..+...
T Consensus 106 ~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~-~~~~~~---~~l~~l~~~~~~~~-------------------------- 153 (353)
T d1jl5a_ 106 SNNQLE-KLPE-LQNSSFLKIIDVDNNSLK-KLPDLP---PSLEFIAAGNNQLE-------------------------- 153 (353)
T ss_dssp CSSCCS-SCCC-CTTCTTCCEEECCSSCCS-CCCCCC---TTCCEEECCSSCCS--------------------------
T ss_pred cccccc-cccc-hhhhccceeecccccccc-cccccc---ccccchhhcccccc--------------------------
Confidence 888877 4554 577788888888888776 333332 34555555554443
Q ss_pred CCCccccCccccceeeccCccccc
Q 037042 214 EIPNEIGNLRNLEVLALGLNKLVG 237 (1002)
Q Consensus 214 ~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1002)
.+..++.++.++.|+++.|.+..
T Consensus 154 -~~~~l~~l~~l~~L~l~~n~~~~ 176 (353)
T d1jl5a_ 154 -ELPELQNLPFLTAIYADNNSLKK 176 (353)
T ss_dssp -SCCCCTTCTTCCEEECCSSCCSS
T ss_pred -ccccccccccceecccccccccc
Confidence 22345566777777777777653
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=1.3e-22 Score=203.84 Aligned_cols=164 Identities=16% Similarity=0.165 Sum_probs=120.8
Q ss_pred CCCceeeccCcceEEEEEeCCCcEEEEEEeecccc------------------hhHHHHHHHHHHHHhccCCCcceeeeE
Q 037042 709 SENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG------------------RAFKSFDVECEVMKSIRHRNIIKIISC 770 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~~~~~ 770 (1002)
.+.++||+|+||+||+|+..+|+.||||+++.... ........|...+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 45689999999999999988899999998753110 112345668899999999999998865
Q ss_pred EecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEE
Q 037042 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH 850 (1002)
Q Consensus 771 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 850 (1002)
.. .+++|||++++.+.++ +......++.|+++|++||| .++|+||||||+|||++++ .++
T Consensus 83 ~~--------~~lvme~~~~~~~~~l--------~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~ 142 (191)
T d1zara2 83 EG--------NAVLMELIDAKELYRV--------RVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIW 142 (191)
T ss_dssp ET--------TEEEEECCCCEEGGGC--------CCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEE
T ss_pred cC--------CEEEEEeeccccccch--------hhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-CEE
Confidence 31 2589999998665432 23345679999999999999 8999999999999999865 589
Q ss_pred EecccccccccCCCceeeeccCCCCcccccccc-----cCCCCcCcccchHHHHHHH
Q 037042 851 LSDFGITKLLTREDQFVTQTQTPATIGYMALEY-----GSEGRVSTNGDVYNFGVML 902 (1002)
Q Consensus 851 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~~~~~DvwSlGv~l 902 (1002)
|+|||.|.....+.. ..|....+ .-...|+.++|+||..--+
T Consensus 143 liDFG~a~~~~~~~~----------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 143 IIDFPQSVEVGEEGW----------REILERDVRNIITYFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp ECCCTTCEETTSTTH----------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred EEECCCcccCCCCCc----------HHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 999999976543221 11221110 1135688999999976544
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.85 E-value=1.2e-19 Score=200.92 Aligned_cols=314 Identities=24% Similarity=0.287 Sum_probs=230.6
Q ss_pred CCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEE
Q 037042 77 SSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILR 156 (1002)
Q Consensus 77 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 156 (1002)
.+|++|||++|.++ ++|+. +++|++|+|++|+|+ .+|.. +.+|+.|++++|+++ .++.. .+.|++|+
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~----~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~ 104 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPEL----PQSLKSLLVDNNNLK-ALSDL---PPLLEYLG 104 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCC----CTTCCEEECCSSCCS-CCCSC---CTTCCEEE
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccc----hhhhhhhhhhhcccc-hhhhh---cccccccc
Confidence 47899999999998 68864 468999999999998 78864 468999999999998 44432 14699999
Q ss_pred cccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccc
Q 037042 157 LSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLV 236 (1002)
Q Consensus 157 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~ 236 (1002)
|++|.++ .+|. ++.+++|++|++++|.++. .|.. ...+..+++..+...
T Consensus 105 L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~--------------------------~~~~---~~~l~~l~~~~~~~~ 153 (353)
T d1jl5a_ 105 VSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKK--------------------------LPDL---PPSLEFIAAGNNQLE 153 (353)
T ss_dssp CCSSCCS-SCCC-CTTCTTCCEEECCSSCCSC--------------------------CCCC---CTTCCEEECCSSCCS
T ss_pred ccccccc-cccc-hhhhccceeeccccccccc--------------------------cccc---cccccchhhcccccc
Confidence 9999998 6674 6889999999999999874 2332 244566666666554
Q ss_pred cccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCcccc
Q 037042 237 GVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTF 316 (1002)
Q Consensus 237 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 316 (1002)
.+..+..++.++.+++++|.+...... ....+.+..+++.+. .++ .+..++.|+.+++++|..... +.
T Consensus 154 --~~~~l~~l~~l~~L~l~~n~~~~~~~~-----~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~~~-~~-- 221 (353)
T d1jl5a_ 154 --ELPELQNLPFLTAIYADNNSLKKLPDL-----PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PD-- 221 (353)
T ss_dssp --SCCCCTTCTTCCEEECCSSCCSSCCCC-----CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CS--
T ss_pred --ccccccccccceecccccccccccccc-----ccccccccccccccc-ccc-ccccccccccccccccccccc-cc--
Confidence 345677889999999999988633221 233455666666665 344 356789999999999988743 33
Q ss_pred ccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccC
Q 037042 317 GNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIG 396 (1002)
Q Consensus 317 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 396 (1002)
...++..+.+.+|++...+. ....+...++..|.+.++. .+.......++..+.+.+ ...
T Consensus 222 -~~~~l~~~~~~~~~~~~~~~---------~~~~l~~~~~~~~~~~~l~------~l~~~~~~~~~~~~~~~~----~~~ 281 (353)
T d1jl5a_ 222 -LPPSLEALNVRDNYLTDLPE---------LPQSLTFLDVSENIFSGLS------ELPPNLYYLNASSNEIRS----LCD 281 (353)
T ss_dssp -CCTTCCEEECCSSCCSCCCC---------CCTTCCEEECCSSCCSEES------CCCTTCCEEECCSSCCSE----ECC
T ss_pred -cccccccccccccccccccc---------ccccccccccccccccccc------cccchhcccccccCcccc----ccc
Confidence 34567778888888876542 3456778888888776542 233456677787777753 234
Q ss_pred CCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCccc
Q 037042 397 NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNL 476 (1002)
Q Consensus 397 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 476 (1002)
.+++|++|+|++|+|+ .+|.. +++|+.|+|++|+|+ .+|.. +.+|++|+|++|+|+ .+|.... +|+.|
T Consensus 282 ~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~~~~---~L~~L 349 (353)
T d1jl5a_ 282 LPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPDIPE---SVEDL 349 (353)
T ss_dssp CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCCCCT---TCCEE
T ss_pred cCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCcccc---ccCee
Confidence 4678999999999998 45643 578999999999998 56653 457999999999998 5665433 45555
Q ss_pred cc
Q 037042 477 SL 478 (1002)
Q Consensus 477 ~L 478 (1002)
.+
T Consensus 350 ~~ 351 (353)
T d1jl5a_ 350 RM 351 (353)
T ss_dssp EC
T ss_pred EC
Confidence 44
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.6e-19 Score=188.81 Aligned_cols=220 Identities=18% Similarity=0.125 Sum_probs=143.7
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC-
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK- 135 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~- 135 (1002)
.++.++.+++ .+|+.+. +++++|+|++|+|+...+..|.++++|++|+|++|.+...+|...|.+++.+++|++..
T Consensus 12 ~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 12 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp EEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred EEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 3444556676 6777664 57899999999998544557888888888888888887777777777788888887653
Q ss_pred CcccccCCccccCCCCCceEEcccccCCCCCc-cccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFAGGIP-KEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 214 (1002)
|.+....+..|.++++|++|++++|++....+ ..+..+..|+.+..+++.+....
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~------------------------ 144 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE------------------------ 144 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEEC------------------------
T ss_pred ccccccccccccccccccccccchhhhccccccccccccccccccccccccccccc------------------------
Confidence 66776677777888888888888887763322 23344555555565665555321
Q ss_pred CCccccCc-cccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccccccccccc
Q 037042 215 IPNEIGNL-RNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293 (1002)
Q Consensus 215 ~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 293 (1002)
+..+.++ ..++.|++++|+++.+.+. .++..+ .++.+++++|+++...+..|.
T Consensus 145 -~~~~~~~~~~l~~L~l~~n~l~~i~~~-~~~~~~------------------------l~~~~~l~~n~l~~l~~~~f~ 198 (242)
T d1xwdc1 145 -RNSFVGLSFESVILWLNKNGIQEIHNC-AFNGTQ------------------------LDELNLSDNNNLEELPNDVFH 198 (242)
T ss_dssp -TTSSTTSBSSCEEEECCSSCCCEECTT-TTTTCC------------------------EEEEECTTCTTCCCCCTTTTT
T ss_pred -ccccccccccceeeecccccccccccc-cccchh------------------------hhccccccccccccccHHHhc
Confidence 1222222 2556666666666533222 222211 222334566666654455677
Q ss_pred ccCCCCeeecCCCccCCCCccccccccccchhcccc
Q 037042 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNN 329 (1002)
Q Consensus 294 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 329 (1002)
++++|++|+|++|+|+.+.+..|.++++|+.|++.+
T Consensus 199 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 199 GASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp TSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred CCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 788888888888888877777788888888877643
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=1.7e-22 Score=232.98 Aligned_cols=109 Identities=22% Similarity=0.261 Sum_probs=54.9
Q ss_pred CCCEEEcccCCCCCC-CCcccccccCCcEEEeccccccc----ccCcccCCCCCCCCEEeCCCCccccc----CCcccc-
Q 037042 78 SLQSLFLHSNQFSGS-IPFSIFNIHTLKLLSFGDNQLSG----EIPTNICSNLPFFESLNLSKNMFHGG----IPSALS- 147 (1002)
Q Consensus 78 ~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~----~ip~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~- 147 (1002)
+|++||++.|++++. +..-+..+++|++|+|++|+++. .|... +...++|++|||++|.|+.. +...+.
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~-L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSA-LRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHH-HHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHH-HhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 466777777777642 12234456666666666666652 11111 23455566666666655421 111221
Q ss_pred CCCCCceEEcccccCCCC----Cccccccccccceeeecccccc
Q 037042 148 NCTYLRILRLSYNDFAGG----IPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 148 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
..++|++|+|++|+++.. ++..+..+++|++|+|++|.++
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 123455555555555432 2334455555555555555554
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.78 E-value=9.8e-19 Score=175.26 Aligned_cols=171 Identities=18% Similarity=0.250 Sum_probs=136.0
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCC-CcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSI-PFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
.++.++++|+ .+|+.+. +++++|+|++|+|++.+ +..|.++++|++|+|++|++. .++...|..+++|++|+|++
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~-~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCS
T ss_pred EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccc-cccccccccccccceeeecc
Confidence 4666778888 7888775 79999999999998755 567789999999999999999 56677778899999999999
Q ss_pred CcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI 215 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 215 (1002)
|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|.+....+..++..... ...+..+...|..
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~--~~~l~~~~~~c~~ 165 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLR--KKSLNGGAARCGA 165 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHH--HHCCSGGGCBBCS
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhhhhh--hhcccCCCeEeCC
Confidence 99998888899999999999999999998888899999999999999999987655555433222 2233444455555
Q ss_pred CccccCccccceeeccCcccc
Q 037042 216 PNEIGNLRNLEVLALGLNKLV 236 (1002)
Q Consensus 216 p~~l~~l~~L~~L~L~~N~l~ 236 (1002)
|.. ++.++.++|+.|.++
T Consensus 166 p~~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 166 PSK---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp STT---TTTSBGGGSCTTTCC
T ss_pred Chh---hcCCEeeecCHhhCc
Confidence 543 344556666666654
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=5.8e-22 Score=228.33 Aligned_cols=388 Identities=19% Similarity=0.164 Sum_probs=191.1
Q ss_pred cccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccc----cccccccccccc
Q 037042 174 TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG----VIPAEIFNMSTI 249 (1002)
Q Consensus 174 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L 249 (1002)
.+|++||+++|++++. .+...+..+++|++|+|++|.++. .+...+..+++|
T Consensus 2 ~~l~~ld~~~~~i~~~------------------------~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L 57 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDA------------------------RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPAL 57 (460)
T ss_dssp EEEEEEEEESCCCCHH------------------------HHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTC
T ss_pred CCCCEEEeeCCcCChH------------------------HHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCC
Confidence 4689999999999852 122334567889999999998873 234556677788
Q ss_pred ceeecccCCCccc----cCCccccCCCccchhhccccccccc----ccccccccCCCCeeecCCCccCCCCcccccc---
Q 037042 250 QGVGLQNNSLSGS----LQSIPYVRLPNLEELYLWGNHFSGS----IPNFIFNASKLSRLELQKNSFSGFIPSTFGN--- 318 (1002)
Q Consensus 250 ~~L~L~~N~l~~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--- 318 (1002)
++|+|++|+++.. +...-.....+|++|+|++|+++.. ++..+...++|++|+|++|.|+......+..
T Consensus 58 ~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~ 137 (460)
T d1z7xw1 58 AELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLL 137 (460)
T ss_dssp CEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred CEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhccc
Confidence 8888888877410 1000011224577777777776543 3344555666777777777665332222111
Q ss_pred --ccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccc---ccccccccccEEecCCCCCCCCCCc
Q 037042 319 --LRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRK---SVGNLSHSLKIFDMSDCNVSGSIPE 393 (1002)
Q Consensus 319 --l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~---~~~~~~~~L~~L~L~~N~l~~~~p~ 393 (1002)
......+......+...... .....+.....++.++++.+.+....... ...........+++.++.+......
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~ 216 (460)
T d1z7xw1 138 DPQCRLEKLQLEYCSLSAASCE-PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR 216 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHH-HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH
T ss_pred ccccccccccccccccchhhhc-ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhh
Confidence 11111222222222211110 11222344455666666655543110000 0001111233344444433211000
Q ss_pred ccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccc-----cCCccccCCccccEEEccCCcCCccC----C
Q 037042 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG-----SIPDEVCRLAKVYQLDLSNNKLSGSI----P 464 (1002)
Q Consensus 394 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~~~~----p 464 (1002)
.....+...+.++.+++++|.+.. ..+........++.+++++|.+.... .
T Consensus 217 --------------------~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~ 276 (460)
T d1z7xw1 217 --------------------DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 276 (460)
T ss_dssp --------------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred --------------------cccccccccccccccchhhccccccccchhhccccccccccccccccccccccccccccc
Confidence 011122334445555555554321 11222233445555555555554221 1
Q ss_pred ccccCCccCcccccccccccccCCccc-----cccccCceeeccCCCCCCCCccc----ccccccceeeeCCCCccCcc-
Q 037042 465 ACFGDLASLRNLSLASNELISVIPSTF-----WNLKDILYLNLSSNSLTGPLPLE----IGNLKVLVKIDFSMNNFSGV- 534 (1002)
Q Consensus 465 ~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~~~- 534 (1002)
..+...+.++.+++++|.+.......+ .....|+.+++++|.++...... +...++|++|+|++|+|+..
T Consensus 277 ~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g 356 (460)
T d1z7xw1 277 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 356 (460)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred ccccccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcc
Confidence 123334455555666555543211111 12345666666666665432222 22344677777777776532
Q ss_pred ---Cccccc-CCccccEEEccCeeeccc----CCcccccccccceeccccccccCCCccc----cc-CCCccceeeCCCC
Q 037042 535 ---IPNAIG-GIKDLQFLFLEYNILQGS----IPDSFGDLMSLKSLNLSNNNLSGSIPVS----LE-KLSYLKDLNLSFN 601 (1002)
Q Consensus 535 ---~p~~~~-~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~-~l~~L~~L~Ls~N 601 (1002)
++..+. ..+.|++|+|++|.|+.. ++..+..+++|++|||++|+|+...... +. +...|+.|++++|
T Consensus 357 ~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~ 436 (460)
T d1z7xw1 357 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDI 436 (460)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTC
T ss_pred cchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCC
Confidence 223332 345677777777777642 3344555677777777777776432222 22 2346778888887
Q ss_pred cCccc
Q 037042 602 KLEGE 606 (1002)
Q Consensus 602 ~l~~~ 606 (1002)
.+..+
T Consensus 437 ~~~~~ 441 (460)
T d1z7xw1 437 YWSEE 441 (460)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 77643
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.78 E-value=2.3e-19 Score=179.97 Aligned_cols=176 Identities=20% Similarity=0.222 Sum_probs=123.6
Q ss_pred CEEEccCCcccccCCccccCCccccEEEccCCcCCc-cCCccccCCccCcccccccccccccCCccccccccCceeeccC
Q 037042 426 QVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSG-SIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSS 504 (1002)
Q Consensus 426 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 504 (1002)
++++.++|+++ .+|..+. +++++|+|++|+|++ ..+..|..+++|+.|+|++|++..+.+..|..+++|++|+|++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 35566666666 4444442 466777777777764 3455667777777777777777777777777777788888888
Q ss_pred CCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCc
Q 037042 505 NSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIP 584 (1002)
Q Consensus 505 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 584 (1002)
|+|+++.|..|.++++|++|+|++|+|+++.|++|.++++|++|+|++|.+....+ ...-...++.+.+..|.++...|
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p 166 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSS
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCC
Confidence 88777777777888888888888888887778888888888888888888874332 22222346777788888887677
Q ss_pred ccccCCCccceeeCCCCcCcccCC
Q 037042 585 VSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 585 ~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
..+ ..++.++|+.|.+.+.-+
T Consensus 167 ~~l---~~~~l~~L~~n~l~C~~~ 187 (192)
T d1w8aa_ 167 SKV---RDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp TTT---TTSBGGGSCTTTCCCCCC
T ss_pred hhh---cCCEeeecCHhhCcCCCC
Confidence 554 445677888888876544
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.77 E-value=5.1e-19 Score=182.78 Aligned_cols=207 Identities=20% Similarity=0.302 Sum_probs=110.3
Q ss_pred CccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCC
Q 037042 272 PNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYL 351 (1002)
Q Consensus 272 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L 351 (1002)
.++..++++.+++++.+ .+..+.+|+.|++.+|+|+.+ +.+..+++|++|++++|+++.++. +..+++|
T Consensus 19 ~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~-------l~~l~~l 87 (227)
T d1h6ua2 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP-------LKNLTKI 87 (227)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG-------GTTCCSC
T ss_pred HHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc-------ccccccc
Confidence 34445566666666533 345566777777777777654 236666666666666666665431 4455555
Q ss_pred cEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEcc
Q 037042 352 EFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431 (1002)
Q Consensus 352 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 431 (1002)
+++++++|.++.+ ..+..+++|+.++++++...+. ..+...+.++
T Consensus 88 ~~l~~~~n~~~~i----------------------------~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~----- 132 (227)
T d1h6ua2 88 TELELSGNPLKNV----------------------------SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQ----- 132 (227)
T ss_dssp CEEECCSCCCSCC----------------------------GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCC-----
T ss_pred ccccccccccccc----------------------------cccccccccccccccccccccc--chhccccchh-----
Confidence 5555555544322 1233444455555554444322 1123333444
Q ss_pred CCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCC
Q 037042 432 DNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511 (1002)
Q Consensus 432 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 511 (1002)
.+.++++.+... ..+..+++|+.|++++|.+.+. ..|.++++|+.|+|++|++++.
T Consensus 133 -------------------~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~l- 188 (227)
T d1h6ua2 133 -------------------VLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISDI- 188 (227)
T ss_dssp -------------------EEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-
T ss_pred -------------------hhhchhhhhchh--hhhccccccccccccccccccc--hhhcccccceecccCCCccCCC-
Confidence 444444444321 1234444555555555555433 2255566666666666666642
Q ss_pred cccccccccceeeeCCCCccCccCcccccCCccccEEEcc
Q 037042 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLE 551 (1002)
Q Consensus 512 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 551 (1002)
+ .++++++|++|+|++|+|+++.| ++++++|+.|+++
T Consensus 189 ~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 189 S-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp G-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred h-hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 2 25666666677777776665432 6677777777775
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.4e-18 Score=181.53 Aligned_cols=199 Identities=13% Similarity=0.065 Sum_probs=109.7
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccC-CccccCCCCCCEEEcc-CCcccccCCccccCCccccEEE
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI-PITLGKLQKLQVLYFP-DNKLEGSIPDEVCRLAKVYQLD 453 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~-~N~l~~~~p~~~~~l~~L~~L~ 453 (1002)
++++|++++|+|+...+..|.++++|++|++++|.+...+ +..|.++++++.+++. .|.+....+..|.++++|+.|+
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 4555555555555444445666667777777766665433 3456666666666654 3556555566666666666666
Q ss_pred ccCCcCCccCCc-cccCCccCcccccccccccccCCccccccc-cCceeeccCCCCCCCCcccccccccceeeeCCCCcc
Q 037042 454 LSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLK-DILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531 (1002)
Q Consensus 454 Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 531 (1002)
+++|++....+. .+..+..+..+..+++.+..+.+..|.+++ .++.|++++|+++...+..+.....++.+++++|++
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l 189 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNL 189 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTC
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccccccchhhhcccccccccc
Confidence 666666533221 223344444445555555555555555543 455666666666643333333322233334555566
Q ss_pred CccCcccccCCccccEEEccCeeecccCCcccccccccceecc
Q 037042 532 SGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNL 574 (1002)
Q Consensus 532 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 574 (1002)
+.+.+..|.++++|++|+|++|+|+...+..|.++++|+.|++
T Consensus 190 ~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 190 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp CCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred ccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 5554555666666666666666666444445555555555554
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=1e-18 Score=180.40 Aligned_cols=167 Identities=23% Similarity=0.398 Sum_probs=86.1
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|++|++++|++++..| +.++++|+++++++|.++. ++ .+..+++|+.++++++...+. ..+...+.++
T Consensus 59 l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~ 132 (227)
T d1h6ua2 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQ 132 (227)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC--GGGTTCTTCC
T ss_pred HhcCCCCcEeecCCceeecccc--ccccccccccccccccccc-cc-ccccccccccccccccccccc--chhccccchh
Confidence 4555566666666666654332 5566666666666666552 22 355566666666666655432 2244455556
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.+.++++.+... ..+.+.++|+.|++++|.+++. ..++++++|+.|+|++|+++++ + .++++++|++|+|++|+
T Consensus 133 ~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 133 VLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQ 206 (227)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSC
T ss_pred hhhchhhhhchh--hhhccccccccccccccccccc--hhhcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCc
Confidence 666665555432 2244555555555555555432 1244555555555555555432 1 24445555555555555
Q ss_pred ecccCCcccccccccceeccc
Q 037042 555 LQGSIPDSFGDLMSLKSLNLS 575 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls 575 (1002)
|++..| +.++++|+.|+|+
T Consensus 207 lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 207 ISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp CCBCGG--GTTCTTCCEEEEE
T ss_pred CCCCcc--cccCCCCCEEEee
Confidence 543221 4444455555444
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.72 E-value=9.7e-18 Score=170.45 Aligned_cols=164 Identities=23% Similarity=0.349 Sum_probs=81.3
Q ss_pred CCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccc
Q 037042 398 LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLS 477 (1002)
Q Consensus 398 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 477 (1002)
+.+|+.|++++|.++... .+..+++|++|+|++|++++.. .+..+++|+.|++++|+|++ +| .+..+++|+.|+
T Consensus 45 L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred hcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-cc-cccccccccccc
Confidence 344555555555554322 2455555555555555555322 23455555555555555553 22 345555555555
Q ss_pred cccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecc
Q 037042 478 LASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 478 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 557 (1002)
+++|.+... ..+..+++++.+++++|.+++ +..+..+++|+.+++++|++++.. .+.++++|+.|+|++|+|+.
T Consensus 119 l~~~~~~~~--~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~ 192 (210)
T d1h6ta2 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISD 192 (210)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCB
T ss_pred ccccccccc--ccccccccccccccccccccc--cccccccccccccccccccccccc--cccCCCCCCEEECCCCCCCC
Confidence 555554432 234555555555555555543 223444555555555555554322 24455555555555555542
Q ss_pred cCCcccccccccceeccc
Q 037042 558 SIPDSFGDLMSLKSLNLS 575 (1002)
Q Consensus 558 ~~p~~~~~l~~L~~L~Ls 575 (1002)
+| .|.++++|+.|+|+
T Consensus 193 -l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 193 -LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp -CG-GGTTCTTCSEEEEE
T ss_pred -Ch-hhcCCCCCCEEEcc
Confidence 22 34555555555544
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.72 E-value=1.1e-17 Score=169.99 Aligned_cols=183 Identities=23% Similarity=0.333 Sum_probs=87.9
Q ss_pred cchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcE
Q 037042 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353 (1002)
Q Consensus 274 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~ 353 (1002)
+....+..+.+++.++. ..+.+|++|++++|.++... .+..+++|++|+|++|+|+.++. ++.+++|++
T Consensus 26 ~i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l~~-------~~~l~~L~~ 94 (210)
T d1h6ta2 26 TIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP-------LANLKNLGW 94 (210)
T ss_dssp HHHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG-------GTTCTTCCE
T ss_pred HHHHHhCcCccCCccCH--HHhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCccc-------cccCccccc
Confidence 33445555555544432 23556666777777666442 25566666666666666665542 345555555
Q ss_pred EeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCC
Q 037042 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDN 433 (1002)
Q Consensus 354 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 433 (1002)
|++++|+|+.+ | .+.++++|+.|++++|.+.. ...+..+++++.+++++|
T Consensus 95 L~l~~n~i~~l---------------------------~-~l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~l~~~~n 144 (210)
T d1h6ta2 95 LFLDENKVKDL---------------------------S-SLKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYLGNN 144 (210)
T ss_dssp EECCSSCCCCG---------------------------G-GGTTCTTCCEEECTTSCCCC--CGGGGGCTTCCEEECCSS
T ss_pred ccccccccccc---------------------------c-cccccccccccccccccccc--cccccccccccccccccc
Confidence 55555555432 1 23344444444444444432 123444444555555555
Q ss_pred cccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeecc
Q 037042 434 KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503 (1002)
Q Consensus 434 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 503 (1002)
.+++ +..+..+++|+.+++++|++++.. .+.++++|+.|+|++|+|+++ + .|.++++|++|+|+
T Consensus 145 ~l~~--~~~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 145 KITD--ITVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELF 208 (210)
T ss_dssp CCCC--CGGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEE
T ss_pred cccc--cccccccccccccccccccccccc--cccCCCCCCEEECCCCCCCCC-h-hhcCCCCCCEEEcc
Confidence 4442 122333444444444444444321 144444444444444444432 1 24444444444443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.71 E-value=7.8e-18 Score=169.64 Aligned_cols=105 Identities=30% Similarity=0.430 Sum_probs=44.5
Q ss_pred CCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcc
Q 037042 396 GNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRN 475 (1002)
Q Consensus 396 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 475 (1002)
..+++|++|++++|++++..| ++++++|++|++++|.+.. ++ .+.++++|+.|++++|.+... ..+..+++|+.
T Consensus 59 ~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~ 132 (199)
T d2omxa2 59 EYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNR 132 (199)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred ccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-ccccccccccccccccccccc--cccchhhhhHH
Confidence 344455555555555543222 4445555555555554442 21 244444444444444444321 12333444444
Q ss_pred cccccccccccCCccccccccCceeeccCCCCC
Q 037042 476 LSLASNELISVIPSTFWNLKDILYLNLSSNSLT 508 (1002)
Q Consensus 476 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 508 (1002)
|++++|++..+ +.+..+++|+.|++++|+++
T Consensus 133 L~l~~n~l~~~--~~l~~~~~L~~L~l~~n~l~ 163 (199)
T d2omxa2 133 LELSSNTISDI--SALSGLTSLQQLNFSSNQVT 163 (199)
T ss_dssp EECCSSCCCCC--GGGTTCTTCSEEECCSSCCC
T ss_pred hhhhhhhhccc--cccccccccccccccccccc
Confidence 44444443321 12333444444444444443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.69 E-value=4.8e-17 Score=163.73 Aligned_cols=148 Identities=21% Similarity=0.361 Sum_probs=72.2
Q ss_pred CCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCccc
Q 037042 397 NLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNL 476 (1002)
Q Consensus 397 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 476 (1002)
.+.++++|++++|.++.. ..+..+++|++|++++|++++..| +.++++|+.|++++|.+... + .+.+++.|+.|
T Consensus 38 ~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~-~-~l~~l~~L~~L 111 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI-T-PLANLTNLTGL 111 (199)
T ss_dssp HHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCSEE
T ss_pred HhcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCccc--ccCCcccccccccccccccc-c-ccccccccccc
Confidence 345566666666666532 235556666666666666654322 55555566666665555422 2 24555555555
Q ss_pred ccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeec
Q 037042 477 SLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ 556 (1002)
Q Consensus 477 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (1002)
++++|.+... ..+..+++|+.|++++|++.. + ..+..+++|+.|++++|++++.. .++++++|+.|++++|+++
T Consensus 112 ~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 112 TLFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVS 185 (199)
T ss_dssp ECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred cccccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCCc--cccCCCCCCEEECCCCCCC
Confidence 5555554432 224444555555555554442 1 13444444444444444444321 2444444444444444444
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=2.6e-15 Score=144.69 Aligned_cols=113 Identities=16% Similarity=0.133 Sum_probs=96.9
Q ss_pred cccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCC
Q 037042 71 SRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCT 150 (1002)
Q Consensus 71 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 150 (1002)
+.+.+..+|++|+|++|+|+ .+|..+..+++|++|||++|+|+ .++. +..+++|++|+|++|+++...+..+..++
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~~--~~~l~~L~~L~ls~N~i~~l~~~~~~~l~ 87 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLDG--FPLLRRLKTLLVNNNRICRIGEGLDQALP 87 (162)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EECC--CCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccCC--cccCcchhhhhcccccccCCCcccccccc
Confidence 34678889999999999998 66877788999999999999998 5643 57899999999999999966666678899
Q ss_pred CCceEEcccccCCCCCc--cccccccccceeeeccccccc
Q 037042 151 YLRILRLSYNDFAGGIP--KEIGNLTKLEELYLSFNGLQG 188 (1002)
Q Consensus 151 ~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~ 188 (1002)
+|++|+|++|+|+. ++ ..+..+++|++|++++|.++.
T Consensus 88 ~L~~L~L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 88 DLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp TCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred ccccceeccccccc-cccccccccccccchhhcCCCcccc
Confidence 99999999999984 44 468899999999999999974
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.2e-15 Score=162.58 Aligned_cols=224 Identities=20% Similarity=0.238 Sum_probs=116.9
Q ss_pred eeeccCccccccccccccccc--ccceeecccCCCccccCCccccCCCccchhhccccccccc-ccccccccCCCCeeec
Q 037042 227 VLALGLNKLVGVIPAEIFNMS--TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGS-IPNFIFNASKLSRLEL 303 (1002)
Q Consensus 227 ~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L 303 (1002)
.|||+++.+. |+.+..+. .+..+.++...+...+ .......+|++|||+++.++.. ++..+..+++|++|+|
T Consensus 4 ~lDLs~~~l~---~~~l~~l~~~~~~~lrl~~~~~~~~~--~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L 78 (284)
T d2astb2 4 TLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPL--AEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 78 (284)
T ss_dssp EEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCC--CSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred EEECCCCCCC---chHHHHHHhccceEeeccccccccch--hhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccc
Confidence 5677776654 33333222 1233444433332111 1122446788888888877643 3445667788888888
Q ss_pred CCCccCCCCccccccccccchhccccc-cCccchhhhhhhcccCCCCCCcEEeCCCC-CCCCcccccccccccccccEEe
Q 037042 304 QKNSFSGFIPSTFGNLRNLKRLGLNNN-HLTSLTLELSFLSSLSNCKYLEFIDLSSN-SIDGILSRKSVGNLSHSLKIFD 381 (1002)
Q Consensus 304 ~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~L~~L~ 381 (1002)
++|.+++..+..++.+++|++|+|+++ .++..... .-+.++++|++|+++++ .++.......+....+.|+.|+
T Consensus 79 ~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~----~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~ 154 (284)
T d2astb2 79 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQ----TLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLN 154 (284)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHH----HHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEE
T ss_pred cccCCCcHHHHHHhcCCCCcCccccccccccccccc----hhhHHHHhccccccccccccccccchhhhcccccccchhh
Confidence 888887777777888888888888884 56542211 11346778888888875 3332111111222234455555
Q ss_pred cCCCCCCCCCCcccCCCCCccEEEccCCccCcc-CCccccCCCCCCEEEccCC-cccccCCccccCCccccEEEccC-Cc
Q 037042 382 MSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGS-IPITLGKLQKLQVLYFPDN-KLEGSIPDEVCRLAKVYQLDLSN-NK 458 (1002)
Q Consensus 382 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~ 458 (1002)
++++.. .++.. +...+.++++|++|++++| .+++.....+.++++|++|+|++ +.
T Consensus 155 l~~~~~----------------------~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~ 212 (284)
T d2astb2 155 LSGYRK----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYD 212 (284)
T ss_dssp CCSCGG----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTT
T ss_pred hccccc----------------------ccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCC
Confidence 554311 12111 1112233445555555543 24444444444555555555555 23
Q ss_pred CCccCCccccCCccCcccccccc
Q 037042 459 LSGSIPACFGDLASLRNLSLASN 481 (1002)
Q Consensus 459 l~~~~p~~~~~l~~L~~L~L~~N 481 (1002)
+++.....++++++|+.|+++++
T Consensus 213 i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 213 IIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTS
T ss_pred CChHHHHHHhcCCCCCEEeeeCC
Confidence 44433344555555666665554
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=9e-16 Score=163.49 Aligned_cols=223 Identities=17% Similarity=0.182 Sum_probs=128.7
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.|||+++.+.+.....+.. ..+..+.++...+...+ .......+|++|||++|.+.......++.++++|++|+|+++
T Consensus 4 ~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~-~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~ 81 (284)
T d2astb2 4 TLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPL-AEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL 81 (284)
T ss_dssp EEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCC-CSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTC
T ss_pred EEECCCCCCCchHHHHHHh-ccceEeeccccccccch-hhhccCCCCCEEECCCCccCHHHHHHHHHhCCCccccccccc
Confidence 6788877776444333322 23556666666655332 334455678888888887765544556677788888888888
Q ss_pred cccccCCccccCCCCCceEEcccc-cCCCC-Cccccccccccceeeeccc-cccccccchhhHHhhhchhhcccCCcccC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYN-DFAGG-IPKEIGNLTKLEELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKC 213 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~~~~n~~~~ 213 (1002)
.+++..+..++.+++|++|+|+++ .++.. +...+.++++|++|+++++ .++.. +
T Consensus 82 ~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~---~-------------------- 138 (284)
T d2astb2 82 RLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK---H-------------------- 138 (284)
T ss_dssp BCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH---H--------------------
T ss_pred CCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccc---c--------------------
Confidence 877777777777888888888774 45421 2223456677788877775 33310 0
Q ss_pred CCCcccc-CccccceeeccCc--ccccc-cccccccccccceeecccCCCccccCCccccCCCccchhhcccc-cccccc
Q 037042 214 EIPNEIG-NLRNLEVLALGLN--KLVGV-IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGN-HFSGSI 288 (1002)
Q Consensus 214 ~~p~~l~-~l~~L~~L~L~~N--~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~ 288 (1002)
++..+. ..++|+.|++++. .++.. +.....+ +++|++|+|++| .+++..
T Consensus 139 -~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~-------------------------~~~L~~L~L~~~~~itd~~ 192 (284)
T d2astb2 139 -VQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRR-------------------------CPNLVHLDLSDSVMLKNDC 192 (284)
T ss_dssp -HHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHH-------------------------CTTCSEEECTTCTTCCGGG
T ss_pred -chhhhcccccccchhhhcccccccccccccccccc-------------------------cccccccccccccCCCchh
Confidence 111111 1346677776643 23211 1111223 345555555543 344444
Q ss_pred cccccccCCCCeeecCCC-ccCCCCccccccccccchhccccc
Q 037042 289 PNFIFNASKLSRLELQKN-SFSGFIPSTFGNLRNLKRLGLNNN 330 (1002)
Q Consensus 289 p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N 330 (1002)
...+..+++|++|+|++| .|++.....++++++|+.|+++++
T Consensus 193 ~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 193 FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred hhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 555556666777777663 565555555666677777777665
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=1.9e-14 Score=131.64 Aligned_cols=103 Identities=20% Similarity=0.270 Sum_probs=67.0
Q ss_pred CEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEccc
Q 037042 80 QSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSY 159 (1002)
Q Consensus 80 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 159 (1002)
|+|+|++|+++ .+| .+.++++|++|++++|+|+ .+|..+ +.+++|++|++++|+|+ .+| .++++++|++|++++
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~-~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~ 74 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPAL-AALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCN 74 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGG-GGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhh-hhhhccccccccccccc-ccC-ccccccccCeEECCC
Confidence 45666666666 444 3666666666666666665 555543 45667777777777776 344 367777777777777
Q ss_pred ccCCCCC-ccccccccccceeeeccccccc
Q 037042 160 NDFAGGI-PKEIGNLTKLEELYLSFNGLQG 188 (1002)
Q Consensus 160 N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~ 188 (1002)
|+|+... ...+..+++|++|++++|.+++
T Consensus 75 N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 75 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 7776332 2456777777777777777764
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.50 E-value=2.2e-14 Score=131.26 Aligned_cols=117 Identities=23% Similarity=0.362 Sum_probs=98.0
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.|||++|+++ .+| .++.+++|++|+|++|+|+ .+|..++.+++|++|++++|+|+ .+|. +..+++|++|++++|
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~~--~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG--VANLPRLQELLLCNN 75 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCGG--GTTCSSCCEEECCSS
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccCc--cccccccCeEECCCC
Confidence 6999999998 555 5999999999999999998 78989999999999999999998 5664 578999999999999
Q ss_pred cccccC-CccccCCCCCceEEcccccCCCC---Ccccccccccccee
Q 037042 137 MFHGGI-PSALSNCTYLRILRLSYNDFAGG---IPKEIGNLTKLEEL 179 (1002)
Q Consensus 137 ~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L 179 (1002)
+|+... ...++.+++|++|++++|.++.. ....+..+++|+.|
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 999543 25789999999999999999742 22234456666665
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=7e-15 Score=141.68 Aligned_cols=41 Identities=20% Similarity=0.147 Sum_probs=20.8
Q ss_pred ccCCCCCceEEcccccCCCCCccccccccccceeeecccccc
Q 037042 146 LSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 146 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
+.++.+|++|||++|+|+ .+|..+..+++|+.|+|++|+|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~ 54 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR 54 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC
Confidence 344445555555555554 33444444555555555555554
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.50 E-value=1e-15 Score=168.47 Aligned_cols=154 Identities=22% Similarity=0.217 Sum_probs=77.9
Q ss_pred cccCCCCCceEEcccccCCCC----CccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCcccc
Q 037042 145 ALSNCTYLRILRLSYNDFAGG----IPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIG 220 (1002)
Q Consensus 145 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~ 220 (1002)
.+..+++|++|+|++|.++.. +...+...++|++|++++|.++......+...+... .......
T Consensus 88 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~------------~~~~~~~ 155 (344)
T d2ca6a1 88 ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL------------AVNKKAK 155 (344)
T ss_dssp HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH------------HHHHHHH
T ss_pred HHhhCCCcccccccccccccccccchhhhhcccccchheeccccccccccccccccccccc------------ccccccc
Confidence 355667777788877777643 233445667788888888776532111111111000 0011123
Q ss_pred CccccceeeccCcccccc----cccccccccccceeecccCCCccc--c--CCccccCCCccchhhccccccccc----c
Q 037042 221 NLRNLEVLALGLNKLVGV----IPAEIFNMSTIQGVGLQNNSLSGS--L--QSIPYVRLPNLEELYLWGNHFSGS----I 288 (1002)
Q Consensus 221 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~--~--~~~~~~~l~~L~~L~Ls~N~l~~~----~ 288 (1002)
..+.|+.|++++|+++.. +...+...++|+.|+|++|++... . -...+...++|+.|+|++|.++.. +
T Consensus 156 ~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L 235 (344)
T d2ca6a1 156 NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL 235 (344)
T ss_dssp TCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHH
T ss_pred cCcccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccc
Confidence 455677888888877532 223334455666666666665421 0 001122345555555555555321 2
Q ss_pred cccccccCCCCeeecCCCccCC
Q 037042 289 PNFIFNASKLSRLELQKNSFSG 310 (1002)
Q Consensus 289 p~~~~~l~~L~~L~L~~N~l~~ 310 (1002)
...+...++|++|+|++|.|++
T Consensus 236 ~~~l~~~~~L~~L~Ls~n~i~~ 257 (344)
T d2ca6a1 236 AIALKSWPNLRELGLNDCLLSA 257 (344)
T ss_dssp HHHGGGCTTCCEEECTTCCCCH
T ss_pred cccccccccchhhhhhcCccCc
Confidence 2333445555555555555543
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.47 E-value=6.9e-16 Score=169.80 Aligned_cols=264 Identities=17% Similarity=0.192 Sum_probs=135.0
Q ss_pred cccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCc
Q 037042 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE 393 (1002)
Q Consensus 314 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 393 (1002)
..+.+...|+.|+|++|.|...... .+...+...++|+.++++++.+.......... + ..+..
T Consensus 25 ~~L~~~~~l~~L~Ls~n~i~~~~~~-~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~-----~-----------~~l~~ 87 (344)
T d2ca6a1 25 AVLLEDDSVKEIVLSGNTIGTEAAR-WLSENIASKKDLEIAEFSDIFTGRVKDEIPEA-----L-----------RLLLQ 87 (344)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHH-HHHHTTTTCTTCCEEECCSCCTTSCGGGSHHH-----H-----------HHHHH
T ss_pred HHHhhCCCCCEEECcCCcCCHHHHH-HHHHHHHhCCCCCEEECCCCcccccccccchH-----H-----------HHHHH
Confidence 4455666777777777776543221 12234556666666666665543221100000 0 01123
Q ss_pred ccCCCCCccEEEccCCccCcc----CCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccC
Q 037042 394 EIGNLTNLIGFYLGGNNLNGS----IPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGD 469 (1002)
Q Consensus 394 ~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 469 (1002)
.+..+++|++|+|++|.+... +...+...++|+.|++++|.+...-...+.. .+..+. .......
T Consensus 88 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~--~l~~~~---------~~~~~~~ 156 (344)
T d2ca6a1 88 ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--ALQELA---------VNKKAKN 156 (344)
T ss_dssp HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--HHHHHH---------HHHHHHT
T ss_pred HHhhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccc--cccccc---------ccccccc
Confidence 345566777777777776543 2223345566677777666654211111100 000000 0000112
Q ss_pred CccCccccccccccccc----CCccccccccCceeeccCCCCCCC-----CcccccccccceeeeCCCCccCcc----Cc
Q 037042 470 LASLRNLSLASNELISV----IPSTFWNLKDILYLNLSSNSLTGP-----LPLEIGNLKVLVKIDFSMNNFSGV----IP 536 (1002)
Q Consensus 470 l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~l~~~----~p 536 (1002)
.+.|+.+++++|++... +...+...+.|+.|+|++|+++.. +...+..+++|+.|+|++|.++.. +.
T Consensus 157 ~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~ 236 (344)
T d2ca6a1 157 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 236 (344)
T ss_dssp CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH
T ss_pred Ccccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccc
Confidence 33445555555544321 112233455666666666665521 223355566677777777776532 33
Q ss_pred ccccCCccccEEEccCeeecccCCccc----cc--ccccceeccccccccCC----Cccccc-CCCccceeeCCCCcCcc
Q 037042 537 NAIGGIKDLQFLFLEYNILQGSIPDSF----GD--LMSLKSLNLSNNNLSGS----IPVSLE-KLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 537 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~--l~~L~~L~Ls~N~l~~~----~p~~~~-~l~~L~~L~Ls~N~l~~ 605 (1002)
..+..+++|++|+|++|.|++.....+ .. .+.|+.|++++|+|+.. +...+. ++++|+.|+|++|++..
T Consensus 237 ~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 237 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred ccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 455667777777777777765432222 22 24678888888887642 223332 46678888888888863
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=9e-13 Score=125.74 Aligned_cols=99 Identities=24% Similarity=0.199 Sum_probs=60.5
Q ss_pred cccccCCcEEEecccc-cccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccc
Q 037042 97 IFNIHTLKLLSFGDNQ-LSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTK 175 (1002)
Q Consensus 97 ~~~l~~L~~L~L~~N~-l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 175 (1002)
+.++++|++|++++|+ |+ .|+...|.++++|+.|+|++|+|+...|..|.++++|++|+|++|+|+...+..|.. .+
T Consensus 27 l~~l~~l~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~-~~ 104 (156)
T d2ifga3 27 LPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG-LS 104 (156)
T ss_dssp SCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS-CC
T ss_pred ccCccccCeeecCCCcccc-ccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhcc-cc
Confidence 3334444444443332 33 555566666777777777777777666677777888888888888887433344443 46
Q ss_pred cceeeeccccccccccchhhHH
Q 037042 176 LEELYLSFNGLQGAYDHGFLQI 197 (1002)
Q Consensus 176 L~~L~Ls~N~l~~~~~~~~~~~ 197 (1002)
|++|+|++|.+.-.-+..++..
T Consensus 105 l~~L~L~~Np~~C~C~~~~l~~ 126 (156)
T d2ifga3 105 LQELVLSGNPLHCSCALRWLQR 126 (156)
T ss_dssp CCEEECCSSCCCCCGGGHHHHH
T ss_pred ccccccCCCcccCCchHHHHHH
Confidence 8888888888764333334333
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.39 E-value=6.5e-15 Score=147.14 Aligned_cols=113 Identities=27% Similarity=0.374 Sum_probs=70.2
Q ss_pred ccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCcccc
Q 037042 68 TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALS 147 (1002)
Q Consensus 68 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 147 (1002)
.+|.+++.|++|++|+|++|+|+ .++ .+.++++|++|+|++|+|+ .+|... ..+++|++|++++|+++. ++ .+.
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~-~~~~~L~~L~l~~N~i~~-l~-~~~ 112 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLD-AVADTLEELWISYNQIAS-LS-GIE 112 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHH-HHHHHCCEEECSEEECCC-HH-HHH
T ss_pred hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccc-cccccccccccccccccc-cc-ccc
Confidence 45567777888888888888877 444 4777777777777777776 454322 234456666666666653 22 355
Q ss_pred CCCCCceEEcccccCCCCCc--cccccccccceeeecccccc
Q 037042 148 NCTYLRILRLSYNDFAGGIP--KEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 148 ~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
++++|++|+|++|+|+. ++ ..+.++++|++|+|++|.++
T Consensus 113 ~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 113 KLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSSHHH
T ss_pred ccccccccccccchhcc-ccccccccCCCccceeecCCCccc
Confidence 66666666666666652 22 34556666666666666654
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.38 E-value=1.1e-14 Score=145.44 Aligned_cols=115 Identities=23% Similarity=0.264 Sum_probs=65.0
Q ss_pred cCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCcccc
Q 037042 141 GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIG 220 (1002)
Q Consensus 141 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~ 220 (1002)
.+|.+++.+++|++|+|++|+|+ .++ .|.++++|++|+|++|+++ .+|....
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~--------------------------~i~~~~~ 90 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK--------------------------KIENLDA 90 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC--------------------------SCSSHHH
T ss_pred hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc--------------------------ccccccc
Confidence 44556677777777777777776 343 4667777777777777765 2343334
Q ss_pred CccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccc
Q 037042 221 NLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS 285 (1002)
Q Consensus 221 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 285 (1002)
.+++|++|++++|+++.+ ..+..+++|+.|++++|+++...+-..+..+++|++|+|++|.+.
T Consensus 91 ~~~~L~~L~l~~N~i~~l--~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 91 VADTLEELWISYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHHCCEEECSEEECCCH--HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred cccccccccccccccccc--ccccccccccccccccchhccccccccccCCCccceeecCCCccc
Confidence 455677777777776643 235555566666666665542111112334444555555555443
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=1.6e-12 Score=124.05 Aligned_cols=104 Identities=17% Similarity=0.178 Sum_probs=52.8
Q ss_pred EEEccCCcCCccCCccccCCccCcccccccc-cccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCC
Q 037042 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASN-ELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 451 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
.++.+++.+. ..|..+..+++|++|++++| .|+.+.+.+|.++++|+.|+|++|+|+.+.+..|.++++|++|+|++|
T Consensus 12 ~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 12 GLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp CEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred eEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC
Confidence 3444444444 23444444555555555433 244444445555555555555555555544555555555555555555
Q ss_pred ccCccCcccccCCccccEEEccCeeec
Q 037042 530 NFSGVIPNAIGGIKDLQFLFLEYNILQ 556 (1002)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (1002)
+|+.+.+..|..+ +|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~~~~~-~l~~L~L~~Np~~ 116 (156)
T d2ifga3 91 ALESLSWKTVQGL-SLQELVLSGNPLH 116 (156)
T ss_dssp CCSCCCSTTTCSC-CCCEEECCSSCCC
T ss_pred CCcccChhhhccc-cccccccCCCccc
Confidence 5554444444433 4666666666553
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=5.4e-09 Score=99.73 Aligned_cols=40 Identities=23% Similarity=0.034 Sum_probs=18.9
Q ss_pred CCCCCceEEcccccCCCCCccccccccccceeeeccccccc
Q 037042 148 NCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQG 188 (1002)
Q Consensus 148 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 188 (1002)
.+..+..|++.+|... .++..+..+++|++|+|++|+|+.
T Consensus 40 ~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~ 79 (162)
T d1koha1 40 AQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYR 79 (162)
T ss_dssp TTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCC
T ss_pred hccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccC
Confidence 3334444444444332 333334455556666666665553
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=1.4e-08 Score=96.85 Aligned_cols=66 Identities=27% Similarity=0.321 Sum_probs=35.7
Q ss_pred ccCccccceeeccCccccccc--ccccccccccceeecccCCCccccCCccccCCCccchhhccccccc
Q 037042 219 IGNLRNLEVLALGLNKLVGVI--PAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS 285 (1002)
Q Consensus 219 l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 285 (1002)
...+++|++|+|++|+|+.+. +..+..+++|+.|+|++|+++ .++...+....+|+.|+|++|.+.
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcC
Confidence 346778888888888887642 233445555666666666554 222222222333444444444443
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.13 E-value=1.1e-06 Score=90.84 Aligned_cols=148 Identities=14% Similarity=0.082 Sum_probs=101.5
Q ss_pred HHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhh
Q 037042 700 ELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 778 (1002)
++.+..+.|+..+..+.++.+.||+...+ ++.++||+...........+.+|..+++.+. +--+.+++.+...++
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~--- 83 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--- 83 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT---
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCC---
Confidence 45555667776655544556789998754 5667888876554444456788888888774 434667777766554
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC-------------------------------
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY------------------------------- 827 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------- 827 (1002)
..++|||+++|.++.+...... ....++.++++.++.||...
T Consensus 84 -~~~lv~~~l~G~~~~~~~~~~~------~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T d1j7la_ 84 -WSNLLMSEADGVLCSEEYEDEQ------SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp -EEEEEEECCSSEEHHHHTTTCS------CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGG
T ss_pred -ceEEEEEecccccccccccccc------cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhh
Confidence 3468999999988866543221 12345667777777777310
Q ss_pred -------------------------CCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 828 -------------------------STPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 828 -------------------------~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++|+|+.|.||++++++.+-|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 1237999999999999987667799998774
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.57 E-value=7.4e-06 Score=77.73 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=22.4
Q ss_pred cccCCCCCceEEcccccCCC----CCccccccccccceeeecccccc
Q 037042 145 ALSNCTYLRILRLSYNDFAG----GIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 145 ~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
.+...++|++|+|++|.+.. .+...+...+.|++|+|++|.++
T Consensus 39 ~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 39 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 85 (167)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence 34455556666666665542 12223334455666666666655
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.49 E-value=2.5e-05 Score=79.74 Aligned_cols=130 Identities=15% Similarity=0.065 Sum_probs=85.6
Q ss_pred eeeccC-cceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccC--CCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 713 LIGRGG-FGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH--RNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 713 ~lG~G~-~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
.+..|. -+.||+...+++..+++|...... ...+..|.+.++.+.. -.+.+++++...++ ..++||||++
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~----~~~~v~~~i~ 89 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAG----RDWLLLGEVP 89 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS----CEEEEEECCS
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeeccccc----ceEEEEEeee
Confidence 344454 367999998888889999865442 2346778888887743 33667777766554 3468999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-------------------------------------------
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG------------------------------------------- 826 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------- 826 (1002)
|.++.+.. ... ...+.++++.++-||..
T Consensus 90 G~~~~~~~------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T d1nd4a_ 90 GQDLLSSH------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE 160 (255)
T ss_dssp SEETTTSC------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred cccccccc------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHH
Confidence 87664421 111 12233444445555520
Q ss_pred ------------CCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 827 ------------YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 827 ------------~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
....++|+|+.|.||+++.+..+-|+||+.+.
T Consensus 161 ~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 161 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 12247999999999999987777899998764
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.44 E-value=1.1e-05 Score=76.39 Aligned_cols=112 Identities=12% Similarity=0.130 Sum_probs=66.3
Q ss_pred CCCCCCEEEcccC-CCCCC----CCcccccccCCcEEEecccccccccCcc---cCCCCCCCCEEeCCCCccccc----C
Q 037042 75 NLSSLQSLFLHSN-QFSGS----IPFSIFNIHTLKLLSFGDNQLSGEIPTN---ICSNLPFFESLNLSKNMFHGG----I 142 (1002)
Q Consensus 75 ~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~~---~~~~l~~L~~L~Ls~N~l~~~----~ 142 (1002)
+.++|++|+|+++ .++.. +-..+...++|++|+|++|.+...-... .+...+.|++|+|++|.|+.. +
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 4466677777653 34321 2223445566777777776665321111 123356677788888877642 2
Q ss_pred CccccCCCCCceEEcccccCCCC-------Cccccccccccceeeeccccc
Q 037042 143 PSALSNCTYLRILRLSYNDFAGG-------IPKEIGNLTKLEELYLSFNGL 186 (1002)
Q Consensus 143 p~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~L~Ls~N~l 186 (1002)
-..+...++|++|+|++|++... +...+..-+.|+.|+++.+..
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 33566778888888888866522 334455567788888877654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.06 E-value=0.0004 Score=75.26 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=48.0
Q ss_pred ceeeccCcceEEEEEeC-CCcEEEEEEeecc-------cchhHHHHHHHHHHHHhcc-C--CCcceeeeEEecCchhhHH
Q 037042 712 NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ-------CGRAFKSFDVECEVMKSIR-H--RNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~~~ 780 (1002)
+.||.|....||+++.. +++.|+||.-... ..........|.+.++.+. + ..+.+++.+....
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~~~------ 105 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEM------ 105 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTT------
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcCCC------
Confidence 56899999999999865 4678999964321 1112334566888887763 3 3466676654332
Q ss_pred HHHhhccCCCCCh
Q 037042 781 KALALEYMPHGSL 793 (1002)
Q Consensus 781 ~~lv~e~~~~g~L 793 (1002)
.++|||++++..+
T Consensus 106 ~~lvmE~L~~~~~ 118 (392)
T d2pula1 106 AVTVMEDLSHLKI 118 (392)
T ss_dssp TEEEECCCTTSEE
T ss_pred CEEEEeccCCccc
Confidence 2589999977543
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.88 E-value=6.2e-05 Score=71.07 Aligned_cols=64 Identities=19% Similarity=0.176 Sum_probs=32.7
Q ss_pred CCCCCCEEeCCC-Ccccc----cCCccccCCCCCceEEcccccCCCC----Cccccccccccceeeecccccc
Q 037042 124 NLPFFESLNLSK-NMFHG----GIPSALSNCTYLRILRLSYNDFAGG----IPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 124 ~l~~L~~L~Ls~-N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
+.+.|++|+|++ +.++. .+-..+...++|++|+|++|.++.. +-..+...++|+.|++++|.++
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 345555555554 33432 1223344556666666666665422 1223344556666666666655
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.61 E-value=7.5e-05 Score=70.47 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=50.9
Q ss_pred CCCCCCEEeCCCCccccc----CCccccCCCCCceEEcccccCCCC----Cccccccccccceeee--ccccccccccch
Q 037042 124 NLPFFESLNLSKNMFHGG----IPSALSNCTYLRILRLSYNDFAGG----IPKEIGNLTKLEELYL--SFNGLQGAYDHG 193 (1002)
Q Consensus 124 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~~~~~ 193 (1002)
..++|++|+|++|.++.. +-..+...++|+.|++++|.++.. +-..+...++|+.++| ++|.+......
T Consensus 44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~- 122 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM- 122 (166)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH-
T ss_pred cCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHH-
Confidence 455666666666666532 223455667788888887777532 2345566677776444 45555421110
Q ss_pred hhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccc
Q 037042 194 FLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235 (1002)
Q Consensus 194 ~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l 235 (1002)
.+...+...++|+.|+++.+..
T Consensus 123 --------------------~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 123 --------------------EIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp --------------------HHHHHHHHCSSCCEEECCCSSH
T ss_pred --------------------HHHHHHHhCCCcCEEeCcCCCC
Confidence 1223345566777777766654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.95 E-value=0.0031 Score=66.07 Aligned_cols=41 Identities=15% Similarity=0.123 Sum_probs=32.5
Q ss_pred cceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc
Q 037042 719 FGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR 760 (1002)
Q Consensus 719 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 760 (1002)
--.||+++.++|+.|++|+.+... ...+++..|.+.+..+.
T Consensus 35 EN~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~ 75 (325)
T d1zyla1 35 ENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLV 75 (325)
T ss_dssp SSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHH
T ss_pred cceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHH
Confidence 458999999999999999987542 23466788998888875
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.47 E-value=0.012 Score=63.30 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=48.7
Q ss_pred ceeeccCcceEEEEEeCC--------CcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHH
Q 037042 712 NLIGRGGFGSVYKARIQD--------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+.|+.|---.+|++...+ .+.|.+++.... . ......+|..+++.+. +.-..++++++.. .
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~-~-~~idr~~E~~i~~~ls~~gl~Pkll~~~~~--------g 117 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-E-TESHLVAESVIFTLLSERHLGPKLYGIFSG--------G 117 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-C-CHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------E
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc-c-hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC--------c
Confidence 568878888999998654 245777766532 2 2345678999999884 4434577777642 2
Q ss_pred HhhccCCCCCh
Q 037042 783 LALEYMPHGSL 793 (1002)
Q Consensus 783 lv~e~~~~g~L 793 (1002)
+|+||++|.++
T Consensus 118 ~I~efi~g~~l 128 (395)
T d1nw1a_ 118 RLEEYIPSRPL 128 (395)
T ss_dssp EEECCCCEEEC
T ss_pred eEEEEeccccC
Confidence 78899987554
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.09 E-value=0.016 Score=60.08 Aligned_cols=62 Identities=10% Similarity=0.125 Sum_probs=39.2
Q ss_pred cCHHHHHHhhcCCCCCcee-----eccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc
Q 037042 696 FSYLELCQATDGFSENNLI-----GRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR 760 (1002)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~l-----G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 760 (1002)
.+.+++.....+|...+.. ..|---+.|+.+.++|+ +++|++.+.. ..+.+..|++++..+.
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~ 69 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLA 69 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhh
Confidence 4566777778888775543 34555788999877664 8999986532 2345566777777764
|